SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    762201 7zs9:3 (3.1) BS02 ZN ? GO:0000993 ... Q03290 36411341
    762202 7zs9:4 (3.1) BS01 ZN ? GO:0000112 ... Q12004 36411341
    762203 7zs9:6 (3.1) BS01 ZN ? GO:0000112 ... Q04673 36411341
    762204 7zs9:6 (3.1) BS02 ZN ? GO:0000112 ... Q04673 36411341
    762205 7zs9:6 (3.1) BS03 ZN ? GO:0000112 ... Q04673 36411341
    762206 7zs9:6 (3.1) BS04 ZN ? GO:0000112 ... Q04673 36411341
    762207 7zs9:7 (3.1) BS01 dna 5.6.2.4 GO:0000019 ... Q00578 36411341
    762208 7zs9:7 (3.1) BS02 dna 5.6.2.4 GO:0000019 ... Q00578 36411341
    762209 7zs9:A (3.1) BS01 ZN 2.7.7.6 GO:0000428 ... P04050 36411341
    762210 7zs9:A (3.1) BS02 ZN 2.7.7.6 GO:0000428 ... P04050 36411341
    762211 7zs9:A (3.1) BS03 MG 2.7.7.6 GO:0000428 ... P04050 36411341
    762212 7zs9:B (3.1) BS01 ZN 2.7.7.6 GO:0000428 ... P08518 36411341
    762213 7zs9:C (3.1) BS01 ZN ? GO:0000428 ... P16370 36411341
    762214 7zs9:I (3.1) BS01 ZN ? GO:0000428 ... P27999 36411341
    762215 7zs9:I (3.1) BS02 ZN ? GO:0000428 ... P27999 36411341
    762216 7zs9:J (3.1) BS01 ZN ? GO:0000428 ... P22139 36411341
    762217 7zs9:L (3.1) BS01 ZN ? GO:0000428 ... P40422 36411341
    762218 7zs9:M (3.1) BS01 dna ? GO:0000993 ... P29055 36411341
    762219 7zs9:M (3.1) BS02 ZN ? GO:0000993 ... P29055 36411341
    762220 7zs9:O (3.1) BS01 dna ? GO:0000126 ... P13393 36411341
    762221 7zs9:O (3.1) BS02 dna ? GO:0000126 ... P13393 36411341
    762222 7zs9:Q (3.1) BS01 dna ? GO:0001096 ... P41895 36411341
    762223 7zs9:R (3.1) BS01 dna ? GO:0000166 ... P41896 36411341
    762224 7zs9:R (3.1) BS02 dna ? GO:0000166 ... P41896 36411341
    762225 7zs9:U (3.1) BS01 dna ? GO:0005672 ... P32773 36411341
    762226 7zs9:W (3.1) BS01 dna ? GO:0000993 ... P36100 36411341
    762227 7zs9:W (3.1) BS02 ZN ? GO:0000993 ... P36100 36411341
    762228 7zs9:a (3.1) BS01 dna ? GO:0000786 ... P84233 36411341
    762229 7zs9:a (3.1) BS02 dna ? GO:0000786 ... P84233 36411341
    762230 7zs9:b (3.1) BS01 dna ? GO:0000786 ... P62799 36411341
    762231 7zs9:b (3.1) BS02 dna ? GO:0000786 ... P62799 36411341
    762232 7zs9:c (3.1) BS01 dna ? GO:0000786 ... P06897 36411341
    762233 7zs9:c (3.1) BS02 dna ? GO:0000786 ... P06897 36411341
    762234 7zs9:d (3.1) BS01 dna ? GO:0000786 ... P02281 36411341
    762235 7zs9:d (3.1) BS02 dna ? GO:0000786 ... P02281 36411341
    762236 7zs9:e (3.1) BS01 dna ? GO:0000786 ... P84233 36411341
    762237 7zs9:e (3.1) BS02 dna ? GO:0000786 ... P84233 36411341
    762238 7zs9:f (3.1) BS01 dna ? GO:0000786 ... P62799 36411341
    762239 7zs9:f (3.1) BS02 dna ? GO:0000786 ... P62799 36411341
    762240 7zs9:g (3.1) BS01 dna ? GO:0000786 ... P06897 36411341
    762241 7zs9:g (3.1) BS02 dna ? GO:0000786 ... P06897 36411341
    762242 7zs9:h (3.1) BS01 dna ? GO:0000786 ... P02281 36411341
    762243 7zs9:h (3.1) BS02 dna ? GO:0000786 ... P02281 36411341
    762244 7zsa:0 (4.0) BS01 SF4 3.6.4.12 GO:0000019 ... P06839 36411341
    762245 7zsa:3 (4.0) BS01 ZN ? GO:0000993 ... Q03290 36411341
    762246 7zsa:3 (4.0) BS02 ZN ? GO:0000993 ... Q03290 36411341
    762247 7zsa:4 (4.0) BS01 ZN ? GO:0000112 ... Q12004 36411341
    762248 7zsa:6 (4.0) BS01 dna ? GO:0000112 ... Q04673 36411341
    762249 7zsa:6 (4.0) BS02 ZN ? GO:0000112 ... Q04673 36411341
    762250 7zsa:6 (4.0) BS03 ZN ? GO:0000112 ... Q04673 36411341
    762251 7zsa:6 (4.0) BS04 ZN ? GO:0000112 ... Q04673 36411341
    762252 7zsa:6 (4.0) BS05 ZN ? GO:0000112 ... Q04673 36411341
    762253 7zsa:7 (4.0) BS01 dna 5.6.2.4 GO:0000019 ... Q00578 36411341
    762254 7zsa:7 (4.0) BS02 dna 5.6.2.4 GO:0000019 ... Q00578 36411341
    762255 7zsa:A (4.0) BS01 ZN 2.7.7.6 GO:0000428 ... P04050 36411341
    762256 7zsa:A (4.0) BS02 ZN 2.7.7.6 GO:0000428 ... P04050 36411341
    762257 7zsa:A (4.0) BS03 MG 2.7.7.6 GO:0000428 ... P04050 36411341
    762258 7zsa:B (4.0) BS01 ZN 2.7.7.6 GO:0000428 ... P08518 36411341
    762259 7zsa:C (4.0) BS01 ZN ? GO:0000428 ... P16370 36411341
    762260 7zsa:I (4.0) BS01 ZN ? GO:0000428 ... P27999 36411341
    762261 7zsa:I (4.0) BS02 ZN ? GO:0000428 ... P27999 36411341
    762262 7zsa:J (4.0) BS01 ZN ? GO:0000428 ... P22139 36411341
    762263 7zsa:L (4.0) BS01 ZN ? GO:0000428 ... P40422 36411341
    762264 7zsa:M (4.0) BS01 dna ? GO:0000993 ... P29055 36411341
    762265 7zsa:M (4.0) BS02 ZN ? GO:0000993 ... P29055 36411341
    762266 7zsa:O (4.0) BS01 dna ? GO:0000126 ... P13393 36411341
    762267 7zsa:O (4.0) BS02 dna ? GO:0000126 ... P13393 36411341
    762268 7zsa:R (4.0) BS01 dna ? GO:0000166 ... P41896 36411341
    762269 7zsa:R (4.0) BS02 dna ? GO:0000166 ... P41896 36411341
    762270 7zsa:U (4.0) BS01 dna ? GO:0005672 ... P32773 36411341
    762271 7zsa:U (4.0) BS02 dna ? GO:0005672 ... P32773 36411341
    762272 7zsa:W (4.0) BS01 dna ? GO:0000993 ... P36100 36411341
    762273 7zsa:W (4.0) BS02 dna ? GO:0000993 ... P36100 36411341
    762274 7zsa:W (4.0) BS03 ZN ? GO:0000993 ... P36100 36411341
    762275 7zsa:a (4.0) BS01 dna ? GO:0000786 ... P84233 36411341
    762276 7zsa:a (4.0) BS02 dna ? GO:0000786 ... P84233 36411341
    762277 7zsa:b (4.0) BS01 dna ? GO:0000786 ... P62799 36411341
    762278 7zsa:b (4.0) BS02 dna ? GO:0000786 ... P62799 36411341
    762279 7zsa:c (4.0) BS01 dna ? GO:0000786 ... P06897 36411341
    762280 7zsa:c (4.0) BS02 dna ? GO:0000786 ... P06897 36411341
    762281 7zsa:d (4.0) BS01 dna ? GO:0000786 ... P02281 36411341
    762282 7zsa:d (4.0) BS02 dna ? GO:0000786 ... P02281 36411341
    762283 7zsa:e (4.0) BS01 dna ? GO:0000786 ... P84233 36411341
    762284 7zsa:e (4.0) BS02 dna ? GO:0000786 ... P84233 36411341
    762285 7zsa:f (4.0) BS01 dna ? GO:0000786 ... P62799 36411341
    762286 7zsa:f (4.0) BS02 dna ? GO:0000786 ... P62799 36411341
    762287 7zsa:g (4.0) BS01 dna ? GO:0000786 ... P06897 36411341
    762288 7zsa:g (4.0) BS02 dna ? GO:0000786 ... P06897 36411341
    762289 7zsa:h (4.0) BS01 dna ? GO:0000786 ... P02281 36411341
    762290 7zsa:h (4.0) BS02 dna ? GO:0000786 ... P02281 36411341
    762291 7zsb:0 (6.6) BS01 SF4 3.6.4.12 GO:0000019 ... P06839 36411341
    762292 7zsb:3 (6.6) BS01 ZN ? GO:0000993 ... Q03290 36411341
    762293 7zsb:3 (6.6) BS02 ZN ? GO:0000993 ... Q03290 36411341
    762294 7zsb:4 (6.6) BS01 ZN ? GO:0000112 ... Q12004 36411341
    762295 7zsb:6 (6.6) BS01 ZN ? GO:0000112 ... Q04673 36411341
    762296 7zsb:6 (6.6) BS02 ZN ? GO:0000112 ... Q04673 36411341
    762297 7zsb:6 (6.6) BS03 ZN ? GO:0000112 ... Q04673 36411341
    762298 7zsb:6 (6.6) BS04 ZN ? GO:0000112 ... Q04673 36411341
    762299 7zsb:7 (6.6) BS01 dna 5.6.2.4 GO:0000019 ... Q00578 36411341
    762300 7zsb:7 (6.6) BS02 dna 5.6.2.4 GO:0000019 ... Q00578 36411341
    762301 7zsb:A (6.6) BS01 ZN 2.7.7.6 GO:0000428 ... P04050 36411341
    762302 7zsb:A (6.6) BS02 ZN 2.7.7.6 GO:0000428 ... P04050 36411341
    762303 7zsb:A (6.6) BS03 MG 2.7.7.6 GO:0000428 ... P04050 36411341
    762304 7zsb:B (6.6) BS01 ZN 2.7.7.6 GO:0000428 ... P08518 36411341
    762305 7zsb:C (6.6) BS01 ZN ? GO:0000428 ... P16370 36411341
    762306 7zsb:I (6.6) BS01 ZN ? GO:0000428 ... P27999 36411341
    762307 7zsb:I (6.6) BS02 ZN ? GO:0000428 ... P27999 36411341
    762308 7zsb:J (6.6) BS01 ZN ? GO:0000428 ... P22139 36411341
    762309 7zsb:L (6.6) BS01 ZN ? GO:0000428 ... P40422 36411341
    762310 7zsb:M (6.6) BS01 dna ? GO:0000993 ... P29055 36411341
    762311 7zsb:M (6.6) BS02 ZN ? GO:0000993 ... P29055 36411341
    762312 7zsb:O (6.6) BS01 dna ? GO:0000126 ... P13393 36411341
    762313 7zsb:O (6.6) BS02 dna ? GO:0000126 ... P13393 36411341
    762314 7zsb:R (6.6) BS01 dna ? GO:0000166 ... P41896 36411341
    762315 7zsb:R (6.6) BS02 dna ? GO:0000166 ... P41896 36411341
    762316 7zsb:U (6.6) BS01 dna ? GO:0005672 ... P32773 36411341
    762317 7zsb:W (6.6) BS01 dna ? GO:0000993 ... P36100 36411341
    762318 7zsb:W (6.6) BS02 ZN ? GO:0000993 ... P36100 36411341
    762319 7zsb:a (6.6) BS01 dna ? GO:0000786 ... P84233 36411341
    762320 7zsb:a (6.6) BS02 dna ? GO:0000786 ... P84233 36411341
    762321 7zsb:b (6.6) BS01 dna ? GO:0000786 ... P62799 36411341
    762322 7zsb:b (6.6) BS02 dna ? GO:0000786 ... P62799 36411341
    762323 7zsb:c (6.6) BS01 dna ? GO:0000786 ... P06897 36411341
    762324 7zsb:c (6.6) BS02 dna ? GO:0000786 ... P06897 36411341
    762325 7zsb:d (6.6) BS01 dna ? GO:0000786 ... P02281 36411341
    762326 7zsb:d (6.6) BS02 dna ? GO:0000786 ... P02281 36411341
    762327 7zsb:e (6.6) BS01 dna ? GO:0000786 ... P84233 36411341
    762328 7zsb:e (6.6) BS02 dna ? GO:0000786 ... P84233 36411341
    762329 7zsb:f (6.6) BS01 dna ? GO:0000786 ... P62799 36411341
    762330 7zsb:f (6.6) BS02 dna ? GO:0000786 ... P62799 36411341
    762331 7zsb:g (6.6) BS01 dna ? GO:0000786 ... P06897 36411341
    762332 7zsb:g (6.6) BS02 dna ? GO:0000786 ... P06897 36411341
    762333 7zsb:h (6.6) BS01 dna ? GO:0000786 ... P02281 36411341
    762334 7zsb:h (6.6) BS02 dna ? GO:0000786 ... P02281 36411341
    762335 7zse:A (1.4) BS01 MG ? GO:0005737 ... P84308 35779405
    762336 7zse:A (1.4) BS02 ATP ? GO:0005737 ... P84308 35779405
    762337 7zse:B (1.4) BS01 ATP ? GO:0005737 ... P84253 35779405
    762338 7zsf:A (1.36) BS01 45D ? GO:0005515 ... P74102 36307413
    762339 7zsg:1 (1.39) BS01 45D ? GO:0005515 ... P74102 36307413
    762340 7zsh:1 (1.42) BS01 45D ? GO:0005515 ... P74102 36307413
    762341 7zsi:1 (1.399) BS01 45D ? GO:0005515 ... P74102 36307413
    762342 7zsj:1 (1.41) BS01 45D ? GO:0005515 ... P74102 36307413
    762343 7zsl:A (1.8) BS01 JTO 2.4.2.1 GO:0000255 ... P00491 37134237
    762344 7zsl:B (1.8) BS01 JTO 2.4.2.1 GO:0000255 ... P00491 37134237
    762345 7zsl:C (1.8) BS01 JTO 2.4.2.1 GO:0000255 ... P00491 37134237
    762346 7zsl:D (1.8) BS01 JTO 2.4.2.1 GO:0000255 ... P00491 37134237
    762347 7zsl:E (1.8) BS01 JTO 2.4.2.1 GO:0000255 ... P00491 37134237
    762348 7zsl:F (1.8) BS01 JTO 2.4.2.1 GO:0000255 ... P00491 37134237
    762349 7zsm:A (2.65) BS01 JU9 2.4.2.1 GO:0000255 ... P00491 37134237
    762350 7zsn:A (2.36) BS01 JSI 2.4.2.1 GO:0000255 ... P00491 37134237
    762351 7zsn:A (2.36) BS02 TEW 2.4.2.1 GO:0000255 ... P00491 37134237
    762352 7zsn:A (2.36) BS03 TEW 2.4.2.1 GO:0000255 ... P00491 37134237
    762353 7zso:A (1.95) BS01 JTC 2.4.2.1 GO:0000255 ... P00491 37134237
    762354 7zso:B (1.95) BS01 JTC 2.4.2.1 GO:0000255 ... P00491 37134237
    762355 7zso:C (1.95) BS01 JTC 2.4.2.1 GO:0000255 ... P00491 37134237
    762356 7zsp:A (2.29) BS01 JT3 2.4.2.1 GO:0000255 ... P00491 37134237
    762357 7zsp:A (2.29) BS02 TEW 2.4.2.1 GO:0000255 ... P00491 37134237
    762358 7zsp:A (2.29) BS03 TEW 2.4.2.1 GO:0000255 ... P00491 37134237
    762359 7zsp:A (2.29) BS04 TEW 2.4.2.1 GO:0000255 ... P00491 37134237
    762360 7zsq:A (1.77) BS01 JTO 2.4.2.1 GO:0003824 ... P9WP01 37134237
    762361 7zsq:A (1.77) BS02 TEW 2.4.2.1 GO:0003824 ... P9WP01 37134237
    762362 7zsq:B (1.77) BS01 TEW 2.4.2.1 GO:0003824 ... P9WP01 37134237
    762363 7zsq:B (1.77) BS02 JTO 2.4.2.1 GO:0003824 ... P9WP01 37134237
    762364 7zsq:B (1.77) BS03 P4K 2.4.2.1 GO:0003824 ... P9WP01 37134237
    762365 7zsq:C (1.77) BS01 JTO 2.4.2.1 GO:0003824 ... P9WP01 37134237
    762366 7zsr:A (1.97) BS01 JSI 2.4.2.1 GO:0003824 ... P9WP01 37134237
    762367 7zsr:B (1.97) BS01 JSI 2.4.2.1 GO:0003824 ... P9WP01 37134237
    762368 7zsr:C (1.97) BS01 JSI 2.4.2.1 GO:0003824 ... P9WP01 37134237
    762369 7zst:B (2.5) BS01 JUF 2.1.3.2 GO:0004070 ... A0A5K1K910 36195578
    762370 7zst:C (2.5) BS01 JUF 2.1.3.2 GO:0004070 ... A0A5K1K910 36195578
    762371 7zsu:A (2.2) BS01 JV3 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    762372 7zsu:A (2.2) BS02 HEM 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    762373 7zsu:A (2.2) BS03 JV3 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    762374 7zsu:B (2.2) BS01 JV3 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    762375 7zsu:B (2.2) BS02 HEM 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    762376 7zsu:C (2.2) BS01 JV3 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    762377 7zsu:C (2.2) BS02 HEM 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    762378 7zsv:A (1.74) BS01 HEC ? GO:0046872 ... G1UBD5 37100286
    762379 7zsv:B (1.74) BS01 HEC ? GO:0046872 ... G1UBD5 37100286
    762380 7zsv:B (1.74) BS02 ZN ? GO:0046872 ... G1UBD5 37100286
    762381 7zsw:A (1.94) BS01 HEC ? GO:0046872 ... G1UBD5 37100286
    762382 7zsw:B (1.94) BS01 HEC ? GO:0046872 ... G1UBD5 37100286
    762383 7zsw:B (1.94) BS02 ZN ? GO:0046872 ... G1UBD5 37100286
    762384 7zsx:A (1.77) BS01 HEC ? GO:0046872 ... G1UBD5 37100286
    762385 7zsx:B (1.77) BS01 HEC ? GO:0046872 ... G1UBD5 37100286
    762386 7zsx:B (1.77) BS02 ZN ? GO:0046872 ... G1UBD5 37100286
    762387 7zt0:A (1.99) BS01 HEM 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    762388 7zt0:A (1.99) BS02 JUR 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    762389 7zt0:B (1.99) BS01 HEM 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    762390 7zt0:B (1.99) BS02 JUR 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    762391 7zt2:A (2.4) BS01 2LJ ? N/A Q95460 37382893
    762392 7zt4:A (2.02) BS01 JSO ? N/A Q95460 37382893
    762393 7zt5:A (2.09) BS01 7ZS ? N/A Q95460 37382893
    762394 7zt6:B (3.5) BS01 IHP 3.6.4.- GO:0000723 ... P13010 37870477
    762395 7zt7:A (1.84) BS01 54G ? N/A Q95460 37382893
    762396 7zt8:A (2.29) BS01 OVV ? N/A Q95460 37382893
    762397 7zt9:A (2.13) BS01 4MA ? N/A Q95460 37382893
    762398 7zta:L021 (2.7) BS01 rna ? GO:0000027 ... P60422 37322159
    762399 7zta:L031 (2.7) BS01 rna ? GO:0000027 ... P60438 37322159
    762400 7zta:L041 (2.7) BS01 rna ? GO:0001070 ... P60723 37322159

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).