SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    762401 7zta:L041 (2.7) BS02 MG ? GO:0001070 ... P60723 37322159
    762402 7zta:L051 (2.7) BS01 rna ? GO:0000027 ... P62399 37322159
    762403 7zta:L051 (2.7) BS02 rna ? GO:0000027 ... P62399 37322159
    762404 7zta:L051 (2.7) BS03 rna ? GO:0000027 ... P62399 37322159
    762405 7zta:L061 (2.7) BS01 rna ? GO:0000027 ... P0AG55 37322159
    762406 7zta:L091 (2.7) BS01 rna ? GO:0002181 ... P0A7R1 37322159
    762407 7zta:L131 (2.7) BS01 rna ? GO:0002181 ... P0AA10 37322159
    762408 7zta:L141 (2.7) BS01 rna ? GO:0002181 ... P0ADY3 37322159
    762409 7zta:L141 (2.7) BS02 rna ? GO:0002181 ... P0ADY3 37322159
    762410 7zta:L151 (2.7) BS01 rna ? GO:0002181 ... P02413 37322159
    762411 7zta:L161 (2.7) BS01 rna ? GO:0000027 ... P0ADY7 37322159
    762412 7zta:L161 (2.7) BS02 rna ? GO:0000027 ... P0ADY7 37322159
    762413 7zta:L161 (2.7) BS03 rna ? GO:0000027 ... P0ADY7 37322159
    762414 7zta:L171 (2.7) BS01 rna ? GO:0000027 ... P0AG44 37322159
    762415 7zta:L181 (2.7) BS01 rna ? GO:0002181 ... P0C018 37322159
    762416 7zta:L181 (2.7) BS02 rna ? GO:0002181 ... P0C018 37322159
    762417 7zta:L191 (2.7) BS01 rna ? GO:0000027 ... P0A7K6 37322159
    762418 7zta:L191 (2.7) BS02 rna ? GO:0000027 ... P0A7K6 37322159
    762419 7zta:L201 (2.7) BS01 rna ? GO:0000027 ... P0A7L3 37322159
    762420 7zta:L211 (2.7) BS01 rna ? GO:0002181 ... P0AG48 37322159
    762421 7zta:L221 (2.7) BS01 rna ? GO:0002181 ... P61175 37322159
    762422 7zta:L231 (2.7) BS01 rna ? GO:0000027 ... P0ADZ0 37322159
    762423 7zta:L241 (2.7) BS01 rna ? GO:0000027 ... P60624 37322159
    762424 7zta:L251 (2.7) BS01 rna ? GO:0000027 ... P68919 37322159
    762425 7zta:L271 (2.7) BS01 rna ? GO:0000027 ... P0A7L8 37322159
    762426 7zta:L271 (2.7) BS02 rna ? GO:0000027 ... P0A7L8 37322159
    762427 7zta:L281 (2.7) BS01 rna ? GO:0000027 ... P0A7M2 37322159
    762428 7zta:L291 (2.7) BS01 rna ? GO:0000027 ... P0A7M6 37322159
    762429 7zta:L301 (2.7) BS01 rna ? GO:0000027 ... P0AG51 37322159
    762430 7zta:L311 (2.7) BS01 rna ? GO:0002181 ... P0A7M9 37322159
    762431 7zta:L311 (2.7) BS02 ZN ? GO:0002181 ... P0A7M9 37322159
    762432 7zta:L321 (2.7) BS01 rna ? GO:0000027 ... P0A7N4 37322159
    762433 7zta:L331 (2.7) BS01 rna ? GO:0000027 ... P0A7N9 37322159
    762434 7zta:L341 (2.7) BS01 rna ? GO:0002181 ... P0A7P5 37322159
    762435 7zta:L351 (2.7) BS01 rna ? GO:0002181 ... P0A7Q1 37322159
    762436 7zta:L361 (2.7) BS01 rna ? GO:0002181 ... P0A7Q6 37322159
    762437 7zta:L361 (2.7) BS02 ZN ? GO:0002181 ... P0A7Q6 37322159
    762438 7zta:S021 (2.7) BS01 rna ? GO:0000028 ... P0A7V0 37322159
    762439 7zta:S021 (2.7) BS02 ZN ? GO:0000028 ... P0A7V0 37322159
    762440 7zta:S031 (2.7) BS01 rna ? GO:0003676 ... P0A7V3 37322159
    762441 7zta:S041 (2.7) BS01 rna ? GO:0000028 ... P0A7V8 37322159
    762442 7zta:S051 (2.7) BS01 rna ? GO:0000028 ... P0A7W1 37322159
    762443 7zta:S051 (2.7) BS02 rna ? GO:0000028 ... P0A7W1 37322159
    762444 7zta:S061 (2.7) BS01 rna ? GO:0003735 ... P02358 37322159
    762445 7zta:S071 (2.7) BS01 rna ? GO:0003723 ... P02359 37322159
    762446 7zta:S071 (2.7) BS02 rna ? GO:0003723 ... P02359 37322159
    762447 7zta:S081 (2.7) BS01 rna ? GO:0000028 ... P0A7W7 37322159
    762448 7zta:S091 (2.7) BS01 rna ? GO:0000049 ... P0A7X3 37322159
    762449 7zta:S101 (2.7) BS01 rna ? GO:0000049 ... P0A7R5 37322159
    762450 7zta:S111 (2.7) BS01 rna ? GO:0002181 ... P0A7R9 37322159
    762451 7zta:S121 (2.7) BS01 rna ? GO:0000049 ... P0A7S3 37322159
    762452 7zta:S131 (2.7) BS01 rna ? GO:0000049 ... P0A7S9 37322159
    762453 7zta:S141 (2.7) BS01 rna ? GO:0003735 ... P0AG59 37322159
    762454 7zta:S151 (2.7) BS01 rna ? GO:0000028 ... P0ADZ4 37322159
    762455 7zta:S151 (2.7) BS02 rna ? GO:0000028 ... P0ADZ4 37322159
    762456 7zta:S161 (2.7) BS01 rna ? GO:0000028 ... P0A7T3 37322159
    762457 7zta:S171 (2.7) BS01 rna ? GO:0000028 ... P0AG63 37322159
    762458 7zta:S181 (2.7) BS01 rna ? GO:0003735 ... P0A7T7 37322159
    762459 7zta:S191 (2.7) BS01 rna ? GO:0000028 ... P0A7U3 37322159
    762460 7zta:S201 (2.7) BS01 rna ? GO:0000028 ... P0A7U7 37322159
    762461 7zta:S211 (2.7) BS01 rna ? GO:0003735 ... P68679 37322159
    762462 7ztc:A (3.9) BS01 ADP 3.6.4.- GO:0000776 ... P60709 36586407
    762463 7ztc:B (3.9) BS01 ADP 3.6.4.- GO:0000776 ... P60709 36586407
    762464 7ztc:C (3.9) BS01 ADP 3.6.4.- GO:0000776 ... P60709 36586407
    762465 7ztc:D (3.9) BS01 ADP 3.6.4.- GO:0000776 ... P60709 36586407
    762466 7ztc:E (3.9) BS01 ADP 3.6.4.- GO:0000776 ... P60709 36586407
    762467 7ztc:F (3.9) BS01 ADP 3.6.4.- GO:0000776 ... P60709 36586407
    762468 7ztc:G (3.9) BS01 ADP 3.6.4.- GO:0000776 ... P60709 36586407
    762469 7ztc:H (3.9) BS01 ADP 3.6.4.- GO:0000776 ... P60709 36586407
    762470 7ztd:A (4.6) BS01 ADP 3.6.4.- GO:0000776 ... P60709 36586407
    762471 7ztd:B (4.6) BS01 ADP 3.6.4.- GO:0000776 ... P60709 36586407
    762472 7ztd:C (4.6) BS01 ADP 3.6.4.- GO:0000776 ... P60709 36586407
    762473 7ztd:D (4.6) BS01 ADP 3.6.4.- GO:0000776 ... P60709 36586407
    762474 7ztd:E (4.6) BS01 ADP 3.6.4.- GO:0000776 ... P60709 36586407
    762475 7ztd:F (4.6) BS01 ADP 3.6.4.- GO:0000776 ... P60709 36586407
    762476 7ztd:G (4.6) BS01 ADP 3.6.4.- GO:0000776 ... P60709 36586407
    762477 7ztd:H (4.6) BS01 ADP 3.6.4.- GO:0000776 ... P60709 36586407
    762478 7zti:A (2.09) BS01 HEC ? GO:0046872 ... G1UBD5 37100286
    762479 7zti:B (2.09) BS01 HEC ? GO:0046872 ... G1UBD5 37100286
    762480 7zti:B (2.09) BS02 ZN ? GO:0046872 ... G1UBD5 37100286
    762481 7ztk:A (2.6) BS01 COA 2.7.4.6 GO:0000287 ... P15532 37672589
    762482 7ztk:B (2.6) BS01 COA 2.7.4.6 GO:0000287 ... P15532 37672589
    762483 7ztk:C (2.6) BS01 COA 2.7.4.6 GO:0000287 ... P15532 37672589
    762484 7ztk:D (2.6) BS01 COA 2.7.4.6 GO:0000287 ... P15532 37672589
    762485 7ztk:E (2.6) BS01 COA 2.7.4.6 GO:0000287 ... P15532 37672589
    762486 7ztk:F (2.6) BS01 COA 2.7.4.6 GO:0000287 ... P15532 37672589
    762487 7ztl:A (1.9) BS01 peptide 2.7.11.1 GO:0004672 ... O14965 36601802
    762488 7ztl:A (1.9) BS02 ADP 2.7.11.1 GO:0004672 ... O14965 36601802
    762489 7ztl:A (1.9) BS03 MG 2.7.11.1 GO:0004672 ... O14965 36601802
    762490 7ztl:A (1.9) BS04 JWG 2.7.11.1 GO:0004672 ... O14965 36601802
    762491 7ztm:B (1.45) BS01 JVU 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003723 ... Q32ZE1 38809037
    762492 7ztv:A (1.94) BS01 DHT ? N/A P15207 36921044
    762493 7ztx:A (1.89) BS01 DHT ? N/A P10275 36921044
    762494 7ztz:A (1.4) BS01 DHT ? N/A P10275 36921044
    762495 7zu1:A (1.68) BS01 DHT ? N/A P10275 36921044
    762496 7zu2:A (1.74) BS01 DHT ? N/A P10275 36921044
    762497 7zu6:AAA (1.183) BS01 V4O 3.2.1.17 GO:0003796 ... P00698 37768728
    762498 7zu6:AAA (1.183) BS02 VVB 3.2.1.17 GO:0003796 ... P00698 37768728
    762499 7zu8:A (2.05) BS01 FUC 3.4.21.19 N/A A0A1L7NZU4 35915115
    762500 7zu8:A (2.05) BS02 K93 3.4.21.19 N/A A0A1L7NZU4 35915115
    762501 7zu8:A (2.05) BS03 K93 3.4.21.19 N/A A0A1L7NZU4 35915115
    762502 7zub:A (2.85) BS01 ADP ? GO:0001890 ... P08238 36385050
    762503 7zub:A (2.85) BS02 MOO ? GO:0001890 ... P08238 36385050
    762504 7zub:B (2.85) BS01 ADP ? GO:0001890 ... P08238 36385050
    762505 7zub:B (2.85) BS02 MOO ? GO:0001890 ... P08238 36385050
    762506 7zub:D (2.85) BS01 JY6 ? GO:0006355 ... P35869 36385050
    762507 7zuc:A (1.89) BS01 peptide ? N/A O78126 37490916
    762508 7zuc:D (1.89) BS01 peptide ? N/A O78126 37490916
    762509 7zud:A (2.93) BS01 peptide 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0016032 ... P12497 35738429
    762510 7zui:AAA (1.57) BS01 K2O 2.4.1.129 GO:0004180 ... Q7CRA4 36173746
    762511 7zuj:AAA (1.55) BS01 KQN 2.4.1.129 GO:0004180 ... Q7CRA4 36173746
    762512 7zuk:AAA (1.631) BS01 KQI 2.4.1.129 GO:0004180 ... Q7CRA4 36173746
    762513 7zul:AAA (1.744) BS01 JWL 2.4.1.129 GO:0004180 ... Q7CRA4 36173746
    762514 7zum:A (1.75) BS01 JN9 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004252 ... Q32ZE1 38809037
    762515 7zum:B (1.75) BS01 JN9 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003723 ... Q32ZE1 38809037
    762516 7zun:A (2.5) BS01 JYO 2.7.11.1 GO:0004672 ... P11309 35959859
    762517 7zup:A (2.01) BS01 MTA 2.1.1.320 GO:0000387 ... O14744 36545438
    762518 7zup:A (2.01) BS02 JYX 2.1.1.320 GO:0000387 ... O14744 36545438
    762519 7zuq:A (2.48) BS01 MTA 2.1.1.320 GO:0000387 ... O14744 36545438
    762520 7zus:AAA (2.26) BS01 dna 2.7.7.49
    2.7.7.7
    3.6.4.12
    GO:0003676 ... O75417 36200480
    762521 7zus:AAA (2.26) BS02 dna 2.7.7.49
    2.7.7.7
    3.6.4.12
    GO:0003676 ... O75417 36200480
    762522 7zus:AAA (2.26) BS03 DG3 2.7.7.49
    2.7.7.7
    3.6.4.12
    GO:0003676 ... O75417 36200480
    762523 7zus:BBB (2.26) BS01 dna 2.7.7.49
    2.7.7.7
    3.6.4.12
    GO:0003676 ... O75417 36200480
    762524 7zus:BBB (2.26) BS02 dna 2.7.7.49
    2.7.7.7
    3.6.4.12
    GO:0003676 ... O75417 36200480
    762525 7zus:BBB (2.26) BS03 DG3 2.7.7.49
    2.7.7.7
    3.6.4.12
    GO:0003676 ... O75417 36200480
    762526 7zus:CCC (2.26) BS01 dna 2.7.7.49
    2.7.7.7
    3.6.4.12
    GO:0003676 ... O75417 36200480
    762527 7zus:CCC (2.26) BS02 dna 2.7.7.49
    2.7.7.7
    3.6.4.12
    GO:0003676 ... O75417 36200480
    762528 7zus:CCC (2.26) BS03 DG3 2.7.7.49
    2.7.7.7
    3.6.4.12
    GO:0003676 ... O75417 36200480
    762529 7zuu:A (2.09) BS01 MTA 2.1.1.320 GO:0000387 ... O14744 36545438
    762530 7zuw:AA (4.3) BS01 rna ? GO:0003735 ... P32905 36801861
    762531 7zuw:AB (4.3) BS01 rna ? GO:0000462 ... P33442 36801861
    762532 7zuw:AC (4.3) BS01 rna ? GO:0003723 ... P25443 36801861
    762533 7zuw:AD (4.3) BS01 rna ? GO:0000054 ... P05750 36801861
    762534 7zuw:AE (4.3) BS01 rna ? GO:0002181 ... P0CX35 36801861
    762535 7zuw:AF (4.3) BS01 rna ? GO:0000028 ... P26783 36801861
    762536 7zuw:AG (4.3) BS01 rna ? GO:0000462 ... P0CX37 36801861
    762537 7zuw:AH (4.3) BS01 rna ? GO:0002181 ... P26786 36801861
    762538 7zuw:AI (4.3) BS01 rna ? GO:0000462 ... P0CX40 36801861
    762539 7zuw:AI (4.3) BS02 rna ? GO:0000462 ... P0CX40 36801861
    762540 7zuw:AJ (4.3) BS01 rna ? GO:0000462 ... O13516 36801861
    762541 7zuw:AK (4.3) BS01 rna ? N/A Q08745 36801861
    762542 7zuw:AL (4.3) BS01 rna ? GO:0000028 ... P0CX47 36801861
    762543 7zuw:AM (4.3) BS01 rna ? GO:0003735 ... P48589 36801861
    762544 7zuw:AN (4.3) BS01 rna ? GO:0000462 ... P05756 36801861
    762545 7zuw:AO (4.3) BS01 rna ? GO:0000028 ... P39516 36801861
    762546 7zuw:AP (4.3) BS01 rna ? GO:0003723 ... Q01855 36801861
    762547 7zuw:AQ (4.3) BS01 rna ? GO:0000462 ... P0CX51 36801861
    762548 7zuw:AR (4.3) BS01 rna ? GO:0000028 ... P02407 36801861
    762549 7zuw:AS (4.3) BS01 rna ? GO:0000054 ... P0CX55 36801861
    762550 7zuw:AT (4.3) BS01 rna ? GO:0000028 ... P07280 36801861
    762551 7zuw:AU (4.3) BS01 rna ? GO:0003723 ... P38701 36801861
    762552 7zuw:AW (4.3) BS01 rna ? GO:0002181 ... P0C0W1 36801861
    762553 7zuw:AX (4.3) BS01 rna ? GO:0000462 ... P0CX29 36801861
    762554 7zuw:AY (4.3) BS01 rna ? GO:0000462 ... P0CX31 36801861
    762555 7zuw:AZ (4.3) BS01 rna ? N/A Q3E792 36801861
    762556 7zuw:Aa (4.3) BS01 rna ? GO:0003735 ... P39938 36801861
    762557 7zuw:Ab (4.3) BS01 rna ? GO:0000028 ... P35997 36801861
    762558 7zuw:Ac (4.3) BS01 rna ? GO:0000028 ... Q3E7X9 36801861
    762559 7zuw:Ad (4.3) BS01 rna ? GO:0002181 ... P41057 36801861
    762560 7zuw:Ad (4.3) BS02 ZN ? GO:0002181 ... P41057 36801861
    762561 7zuw:Ae (4.3) BS01 rna ? GO:0002181 ... P0CX33 36801861
    762562 7zuw:Af (4.3) BS01 rna ? GO:0003735 ... P05759 36801861
    762563 7zuw:Ag (4.3) BS01 rna ? GO:0001965 ... P38011 36801861
    762564 7zuw:BA (4.3) BS01 rna ? GO:0002181 ... P0CX45 36801861
    762565 7zuw:BA (4.3) BS02 rna ? GO:0002181 ... P0CX45 36801861
    762566 7zuw:BB (4.3) BS01 rna ? GO:0000027 ... P14126 36801861
    762567 7zuw:BC (4.3) BS01 rna ? GO:0002181 ... P10664 36801861
    762568 7zuw:BC (4.3) BS02 rna ? GO:0002181 ... P10664 36801861
    762569 7zuw:BD (4.3) BS01 rna ? GO:0000027 ... P26321 36801861
    762570 7zuw:BD (4.3) BS02 rna ? GO:0000027 ... P26321 36801861
    762571 7zuw:BE (4.3) BS01 rna ? GO:0000027 ... P05739 36801861
    762572 7zuw:BF (4.3) BS01 rna ? GO:0000463 ... P05737 36801861
    762573 7zuw:BF (4.3) BS02 rna ? GO:0000463 ... P05737 36801861
    762574 7zuw:BG (4.3) BS01 rna ? GO:0000470 ... P17076 36801861
    762575 7zuw:BG (4.3) BS02 rna ? GO:0000470 ... P17076 36801861
    762576 7zuw:BH (4.3) BS01 rna ? GO:0002181 ... P05738 36801861
    762577 7zuw:BI (4.3) BS01 rna ? GO:0000027 ... P41805 36801861
    762578 7zuw:BI (4.3) BS02 rna ? GO:0000027 ... P41805 36801861
    762579 7zuw:BI (4.3) BS03 rna ? GO:0000027 ... P41805 36801861
    762580 7zuw:BJ (4.3) BS01 rna ? GO:0000027 ... P0C0W9 36801861
    762581 7zuw:BJ (4.3) BS02 rna ? GO:0000027 ... P0C0W9 36801861
    762582 7zuw:BJ (4.3) BS03 rna ? GO:0000027 ... P0C0W9 36801861
    762583 7zuw:BK (4.3) BS01 rna ? GO:0002181 ... Q12690 36801861
    762584 7zuw:BK (4.3) BS02 rna ? GO:0002181 ... Q12690 36801861
    762585 7zuw:BL (4.3) BS01 rna ? GO:0000027 ... P36105 36801861
    762586 7zuw:BM (4.3) BS01 rna ? GO:0002181 ... P05748 36801861
    762587 7zuw:BM (4.3) BS02 rna ? GO:0002181 ... P05748 36801861
    762588 7zuw:BN (4.3) BS01 rna ? GO:0000470 ... P26784 36801861
    762589 7zuw:BO (4.3) BS01 rna ? GO:0000448 ... P05740 36801861
    762590 7zuw:BO (4.3) BS02 rna ? GO:0000448 ... P05740 36801861
    762591 7zuw:BP (4.3) BS01 rna ? GO:0002181 ... P0CX49 36801861
    762592 7zuw:BQ (4.3) BS01 rna ? GO:0002181 ... P0CX82 36801861
    762593 7zuw:BQ (4.3) BS02 rna ? GO:0002181 ... P0CX82 36801861
    762594 7zuw:BR (4.3) BS01 rna ? GO:0002181 ... P0CX23 36801861
    762595 7zuw:BR (4.3) BS02 rna ? GO:0002181 ... P0CX23 36801861
    762596 7zuw:BS (4.3) BS01 rna ? GO:0002181 ... Q02753 36801861
    762597 7zuw:BS (4.3) BS02 rna ? GO:0002181 ... Q02753 36801861
    762598 7zuw:BT (4.3) BS01 rna ? GO:0003735 ... P05749 36801861
    762599 7zuw:BU (4.3) BS01 rna ? GO:0002181 ... P0CX41 36801861
    762600 7zuw:BU (4.3) BS02 rna ? GO:0002181 ... P0CX41 36801861

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).