SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    762601 7zuw:BV (4.3) BS01 rna ? GO:0003735 ... P04449 36801861
    762602 7zuw:BW (4.3) BS01 rna ? GO:0003735 ... P04456 36801861
    762603 7zuw:BW (4.3) BS02 rna ? GO:0003735 ... P04456 36801861
    762604 7zuw:BX (4.3) BS01 rna ? GO:0002181 ... P05743 36801861
    762605 7zuw:BX (4.3) BS02 rna ? GO:0002181 ... P05743 36801861
    762606 7zuw:BY (4.3) BS01 rna ? GO:0002181 ... P0C2H6 36801861
    762607 7zuw:BZ (4.3) BS01 rna ? GO:0002181 ... P02406 36801861
    762608 7zuw:Ba (4.3) BS01 rna ? GO:0002181 ... P05747 36801861
    762609 7zuw:Bb (4.3) BS01 rna ? GO:0002181 ... P14120 36801861
    762610 7zuw:Bc (4.3) BS01 rna ? GO:0002181 ... P0C2H8 36801861
    762611 7zuw:Bd (4.3) BS01 rna ? GO:0002181 ... P38061 36801861
    762612 7zuw:Be (4.3) BS01 rna ? GO:0000027 ... P05744 36801861
    762613 7zuw:Bf (4.3) BS01 rna ? GO:0002181 ... P87262 36801861
    762614 7zuw:Bf (4.3) BS02 ZN ? GO:0002181 ... P87262 36801861
    762615 7zuw:Bg (4.3) BS01 rna ? GO:0000463 ... P0CX84 36801861
    762616 7zuw:Bg (4.3) BS02 rna ? GO:0000463 ... P0CX84 36801861
    762617 7zuw:Bh (4.3) BS01 rna ? GO:0002181 ... P05745 36801861
    762618 7zuw:Bi (4.3) BS01 rna ? GO:0000448 ... P49166 36801861
    762619 7zuw:Bi (4.3) BS02 rna ? GO:0000448 ... P49166 36801861
    762620 7zuw:Bi (4.3) BS03 ZN ? GO:0000448 ... P49166 36801861
    762621 7zuw:Bj (4.3) BS01 rna ? GO:0002181 ... P49167 36801861
    762622 7zuw:Bk (4.3) BS01 rna ? GO:0002181 ... P04650 36801861
    762623 7zuw:Bk (4.3) BS02 rna ? GO:0002181 ... P04650 36801861
    762624 7zuw:Bl (4.3) BS01 rna ? GO:0003735 ... P0CH08 36801861
    762625 7zuw:Bl (4.3) BS02 ZN ? GO:0003735 ... P0CH08 36801861
    762626 7zuw:Bn (4.3) BS01 rna ? GO:0002181 ... P0CX27 36801861
    762627 7zuw:Bn (4.3) BS02 ZN ? GO:0002181 ... P0CX27 36801861
    762628 7zuw:Bo (4.3) BS01 rna ? GO:0002181 ... P0CX25 36801861
    762629 7zuw:Bo (4.3) BS02 ZN ? GO:0002181 ... P0CX25 36801861
    762630 7zuw:CA (4.3) BS01 rna 3.6.4.13 GO:0002181 ... P53327 36801861
    762631 7zuw:CC (4.3) BS01 ZN ? GO:0005515 ... P36119 36801861
    762632 7zuw:CC (4.3) BS02 ZN ? GO:0005515 ... P36119 36801861
    762633 7zux:DA (2.5) BS01 rna ? GO:0003735 ... P32905 36801861
    762634 7zux:DB (2.5) BS01 rna ? GO:0000462 ... P33442 36801861
    762635 7zux:DB (2.5) BS02 rna ? GO:0000462 ... P33442 36801861
    762636 7zux:DC (2.5) BS01 rna ? GO:0003723 ... P25443 36801861
    762637 7zux:DD (2.5) BS01 rna ? GO:0000054 ... P05750 36801861
    762638 7zux:DE (2.5) BS01 rna ? GO:0002181 ... P0CX35 36801861
    762639 7zux:DE (2.5) BS02 MG ? GO:0002181 ... P0CX35 36801861
    762640 7zux:DF (2.5) BS01 rna ? GO:0000028 ... P26783 36801861
    762641 7zux:DF (2.5) BS02 MG ? GO:0000028 ... P26783 36801861
    762642 7zux:DG (2.5) BS01 rna ? GO:0000462 ... P0CX37 36801861
    762643 7zux:DH (2.5) BS01 rna ? GO:0002181 ... P26786 36801861
    762644 7zux:DI (2.5) BS01 rna ? GO:0000462 ... P0CX40 36801861
    762645 7zux:DI (2.5) BS02 rna ? GO:0000462 ... P0CX40 36801861
    762646 7zux:DJ (2.5) BS01 rna ? GO:0000462 ... O13516 36801861
    762647 7zux:DK (2.5) BS01 rna ? N/A Q08745 36801861
    762648 7zux:DL (2.5) BS01 rna ? GO:0000028 ... P0CX47 36801861
    762649 7zux:DM (2.5) BS01 rna ? GO:0003735 ... P48589 36801861
    762650 7zux:DN (2.5) BS01 rna ? GO:0000462 ... P05756 36801861
    762651 7zux:DO (2.5) BS01 rna ? GO:0000028 ... P39516 36801861
    762652 7zux:DP (2.5) BS01 rna ? GO:0003723 ... Q01855 36801861
    762653 7zux:DQ (2.5) BS01 rna ? GO:0000462 ... P0CX51 36801861
    762654 7zux:DR (2.5) BS01 rna ? GO:0000028 ... P02407 36801861
    762655 7zux:DS (2.5) BS01 rna ? GO:0000054 ... P0CX55 36801861
    762656 7zux:DT (2.5) BS01 rna ? GO:0000028 ... P07280 36801861
    762657 7zux:DU (2.5) BS01 rna ? GO:0003723 ... P38701 36801861
    762658 7zux:DV (2.5) BS01 rna ? GO:0000447 ... P0C0V8 36801861
    762659 7zux:DW (2.5) BS01 rna ? GO:0002181 ... P0C0W1 36801861
    762660 7zux:DX (2.5) BS01 rna ? GO:0000462 ... P0CX29 36801861
    762661 7zux:DX (2.5) BS02 MG ? GO:0000462 ... P0CX29 36801861
    762662 7zux:DY (2.5) BS01 rna ? GO:0000462 ... P0CX31 36801861
    762663 7zux:DZ (2.5) BS01 rna ? N/A Q3E792 36801861
    762664 7zux:DZ (2.5) BS02 rna ? N/A Q3E792 36801861
    762665 7zux:Da (2.5) BS01 rna ? GO:0003735 ... P39939 36801861
    762666 7zux:Db (2.5) BS01 rna ? GO:0000028 ... P35997 36801861
    762667 7zux:Dc (2.5) BS01 rna ? GO:0000028 ... Q3E7X9 36801861
    762668 7zux:Dd (2.5) BS01 rna ? GO:0002181 ... P41057 36801861
    762669 7zux:Dd (2.5) BS02 ZN ? GO:0002181 ... P41057 36801861
    762670 7zux:De (2.5) BS01 rna ? GO:0002181 ... P0CX33 36801861
    762671 7zux:Df (2.5) BS01 rna ? GO:0003735 ... P05759 36801861
    762672 7zux:Df (2.5) BS02 ZN ? GO:0003735 ... P05759 36801861
    762673 7zux:Dg (2.5) BS01 rna ? GO:0001965 ... P38011 36801861
    762674 7zux:EA (2.5) BS01 rna ? GO:0002181 ... P0CX45 36801861
    762675 7zux:EA (2.5) BS02 rna ? GO:0002181 ... P0CX45 36801861
    762676 7zux:EB (2.5) BS01 rna ? GO:0000027 ... P14126 36801861
    762677 7zux:EC (2.5) BS01 rna ? GO:0002181 ... P10664 36801861
    762678 7zux:EC (2.5) BS02 rna ? GO:0002181 ... P10664 36801861
    762679 7zux:ED (2.5) BS01 rna ? GO:0000027 ... P26321 36801861
    762680 7zux:ED (2.5) BS02 rna ? GO:0000027 ... P26321 36801861
    762681 7zux:EE (2.5) BS01 rna ? GO:0000027 ... P05739 36801861
    762682 7zux:EF (2.5) BS01 rna ? GO:0000463 ... P05737 36801861
    762683 7zux:EF (2.5) BS02 rna ? GO:0000463 ... P05737 36801861
    762684 7zux:EG (2.5) BS01 rna ? GO:0000470 ... P17076 36801861
    762685 7zux:EG (2.5) BS02 rna ? GO:0000470 ... P17076 36801861
    762686 7zux:EH (2.5) BS01 rna ? GO:0002181 ... P05738 36801861
    762687 7zux:EI (2.5) BS01 rna ? GO:0000027 ... P41805 36801861
    762688 7zux:EI (2.5) BS02 rna ? GO:0000027 ... P41805 36801861
    762689 7zux:EI (2.5) BS03 rna ? GO:0000027 ... P41805 36801861
    762690 7zux:EJ (2.5) BS01 rna ? GO:0000027 ... Q3E757 36801861
    762691 7zux:EJ (2.5) BS02 rna ? GO:0000027 ... Q3E757 36801861
    762692 7zux:EK (2.5) BS01 rna ? GO:0002181 ... Q12690 36801861
    762693 7zux:EK (2.5) BS02 rna ? GO:0002181 ... Q12690 36801861
    762694 7zux:EL (2.5) BS01 rna ? GO:0000027 ... P36105 36801861
    762695 7zux:EM (2.5) BS01 rna ? GO:0002181 ... P05748 36801861
    762696 7zux:EM (2.5) BS02 rna ? GO:0002181 ... P05748 36801861
    762697 7zux:EN (2.5) BS01 rna ? GO:0000470 ... P26784 36801861
    762698 7zux:EO (2.5) BS01 rna ? GO:0000448 ... P05740 36801861
    762699 7zux:EO (2.5) BS02 rna ? GO:0000448 ... P05740 36801861
    762700 7zux:EP (2.5) BS01 rna ? GO:0002181 ... P0CX49 36801861
    762701 7zux:EQ (2.5) BS01 rna ? GO:0002181 ... P0CX82 36801861
    762702 7zux:EQ (2.5) BS02 rna ? GO:0002181 ... P0CX82 36801861
    762703 7zux:ER (2.5) BS01 rna ? GO:0002181 ... P0CX23 36801861
    762704 7zux:ER (2.5) BS02 rna ? GO:0002181 ... P0CX23 36801861
    762705 7zux:ES (2.5) BS01 rna ? GO:0002181 ... Q02753 36801861
    762706 7zux:ES (2.5) BS02 rna ? GO:0002181 ... Q02753 36801861
    762707 7zux:ET (2.5) BS01 rna ? GO:0003735 ... P05749 36801861
    762708 7zux:EU (2.5) BS01 rna ? GO:0002181 ... P0CX41 36801861
    762709 7zux:EU (2.5) BS02 rna ? GO:0002181 ... P0CX41 36801861
    762710 7zux:EV (2.5) BS01 rna ? GO:0003735 ... P04449 36801861
    762711 7zux:EV (2.5) BS02 rna ? GO:0003735 ... P04449 36801861
    762712 7zux:EW (2.5) BS01 rna ? GO:0003735 ... P04456 36801861
    762713 7zux:EW (2.5) BS02 rna ? GO:0003735 ... P04456 36801861
    762714 7zux:EX (2.5) BS01 rna ? GO:0002181 ... P05743 36801861
    762715 7zux:EX (2.5) BS02 rna ? GO:0002181 ... P05743 36801861
    762716 7zux:EY (2.5) BS01 rna ? GO:0002181 ... P0C2H6 36801861
    762717 7zux:EZ (2.5) BS01 rna ? GO:0002181 ... P02406 36801861
    762718 7zux:Ea (2.5) BS01 rna ? GO:0002181 ... P05747 36801861
    762719 7zux:Eb (2.5) BS01 rna ? GO:0002181 ... P14120 36801861
    762720 7zux:Ec (2.5) BS01 rna ? GO:0002181 ... P0C2H8 36801861
    762721 7zux:Ed (2.5) BS01 rna ? GO:0002181 ... P38061 36801861
    762722 7zux:Ee (2.5) BS01 rna ? GO:0000027 ... P05744 36801861
    762723 7zux:Ef (2.5) BS01 rna ? GO:0002181 ... P87262 36801861
    762724 7zux:Ef (2.5) BS02 ZN ? GO:0002181 ... P87262 36801861
    762725 7zux:Eg (2.5) BS01 rna ? GO:0000463 ... P0CX84 36801861
    762726 7zux:Eg (2.5) BS02 rna ? GO:0000463 ... P0CX84 36801861
    762727 7zux:Eh (2.5) BS01 rna ? GO:0002181 ... P05745 36801861
    762728 7zux:Ei (2.5) BS01 rna ? GO:0000448 ... P49166 36801861
    762729 7zux:Ei (2.5) BS02 rna ? GO:0000448 ... P49166 36801861
    762730 7zux:Ei (2.5) BS03 ZN ? GO:0000448 ... P49166 36801861
    762731 7zux:Ej (2.5) BS01 rna ? GO:0002181 ... P49167 36801861
    762732 7zux:Ek (2.5) BS01 rna ? GO:0002181 ... P04650 36801861
    762733 7zux:Ek (2.5) BS02 rna ? GO:0002181 ... P04650 36801861
    762734 7zux:El (2.5) BS01 rna ? GO:0003735 ... P0CH08 36801861
    762735 7zux:El (2.5) BS02 ZN ? GO:0003735 ... P0CH08 36801861
    762736 7zux:En (2.5) BS01 rna ? GO:0002181 ... P0CX27 36801861
    762737 7zux:En (2.5) BS02 rna ? GO:0002181 ... P0CX27 36801861
    762738 7zux:En (2.5) BS03 ZN ? GO:0002181 ... P0CX27 36801861
    762739 7zux:Eo (2.5) BS01 rna ? GO:0002181 ... P0CX25 36801861
    762740 7zux:Eo (2.5) BS02 ZN ? GO:0002181 ... P0CX25 36801861
    762741 7zuy:A (2.0) BS01 MTA 2.1.1.320 GO:0000387 ... O14744 36545438
    762742 7zv0:A (2.31) BS01 K1C ? GO:0002218 ... Q86WV6 N/A
    762743 7zv2:A (2.01) BS01 MTA 2.1.1.320 GO:0000387 ... O14744 36545438
    762744 7zv3:A (2.551) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 35758198
    762745 7zv3:A (2.551) BS02 RCT 1.13.11.52 GO:0002376 ... P14902 35758198
    762746 7zv3:B (2.551) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 35758198
    762747 7zv3:B (2.551) BS02 RCT 1.13.11.52 GO:0002376 ... P14902 35758198
    762748 7zv4:A (1.69) BS01 IBW 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004252 ... Q32ZE1 38809037
    762749 7zv4:B (1.69) BS01 IBW 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003723 ... Q32ZE1 38809037
    762750 7zv5:A (1.999) BS01 peptide 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 36332548
    762751 7zv7:A (1.336) BS01 peptide 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 36332548
    762752 7zv8:A (1.937) BS01 peptide 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 36332548
    762753 7zv8:B (1.937) BS01 peptide 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 36332548
    762754 7zv8:B (1.937) BS02 OCA 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 36332548
    762755 7zva:A (1.8) BS01 FUC ? N/A A0A1L7NZU4 35915115
    762756 7zvb:A (2.35) BS01 MAN ? N/A A0A1L7NZU4 35915115
    762757 7zvc:A (1.85) BS01 peptide ? N/A A0A1L7NZU4 35915115
    762758 7zvd:N (2.46) BS01 NAP 1.1.1.49 GO:0004345 ... P11413 37798264
    762759 7zve:E (2.28) BS01 CU 1.1.1.49 GO:0004345 ... P11413 37798264
    762760 7zvf:A (1.6) BS01 KXL 3.4.22.15 GO:0006508 ... P07711 38630165
    762761 7zvf:B (1.6) BS01 KXL 3.4.22.15 GO:0006508 ... P07711 38630165
    762762 7zvf:C (1.6) BS01 KXL 3.4.22.15 GO:0006508 ... P07711 38630165
    762763 7zvf:D (1.6) BS01 KXL 3.4.22.15 GO:0006508 ... P07711 38630165
    762764 7zvj:A (2.61) BS01 MN 2.4.-.-
    2.4.1.-
    2.4.2.-
    GO:0016757 ... O95461 36512577
    762765 7zvj:B (2.61) BS01 MN 2.4.-.-
    2.4.1.-
    2.4.2.-
    GO:0016757 ... O95461 36512577
    762766 7zvk:A (2.83) BS01 K1L ? GO:0002218 ... Q86WV6 N/A
    762767 7zvk:B (2.83) BS01 K1L ? GO:0002218 ... Q86WV6 N/A
    762768 7zvl:A (2.39) BS01 MTA 2.1.1.320 GO:0000387 ... O14744 36545438
    762769 7zvm:A (1.58) BS01 MG ? GO:0016853 ... F0LL70 35955607
    762770 7zvn:A (1.87) BS01 rna ? GO:0001525 ... P07355 36124719
    762771 7zvn:A (1.87) BS02 rna ? GO:0001525 ... P07355 36124719
    762772 7zvn:A (1.87) BS03 CA ? GO:0001525 ... P07355 36124719
    762773 7zvn:A (1.87) BS04 CA ? GO:0001525 ... P07355 36124719
    762774 7zvn:A (1.87) BS05 CA ? GO:0001525 ... P07355 36124719
    762775 7zvn:A (1.87) BS06 CA ? GO:0001525 ... P07355 36124719
    762776 7zvn:A (1.87) BS07 CA ? GO:0001525 ... P07355 36124719
    762777 7zvn:A (1.87) BS08 CA ? GO:0001525 ... P07355 36124719
    762778 7zvn:A (1.87) BS09 CA ? GO:0001525 ... P07355 36124719
    762779 7zvo:A (1.65) BS01 SER ? N/A Q8A921 36660365
    762780 7zvo:A (1.65) BS02 ALA ? N/A Q8A921 36660365
    762781 7zvo:A (1.65) BS03 CA ? N/A Q8A921 36660365
    762782 7zvp:A (1.61) BS01 GS8 2.5.1.18 GO:0004364 ... B9HKX9 36032685
    762783 7zvr:A (2.0) BS01 ZEX ? GO:0008289 ... Q8MYA9 36356587
    762784 7zvs:A (3.07) BS01 ADP 2.7.10.1 GO:0004672 ... A0A3Q0KQ92 36385939
    762785 7zvs:B (3.07) BS01 ADP 2.7.10.1 GO:0004672 ... A0A3Q0KQ92 36385939
    762786 7zvt:A (2.74) BS01 dna 3.6.4.-
    4.2.99.-
    GO:0000723 ... P12956 37870477
    762787 7zvt:A (2.74) BS02 IHP 3.6.4.-
    4.2.99.-
    GO:0000723 ... P12956 37870477
    762788 7zvt:B (2.74) BS01 dna 3.6.4.- GO:0000723 ... P13010 37870477
    762789 7zvt:B (2.74) BS02 dna 3.6.4.- GO:0000723 ... P13010 37870477
    762790 7zvt:B (2.74) BS03 IHP 3.6.4.- GO:0000723 ... P13010 37870477
    762791 7zvu:A (1.95) BS01 MTA 2.1.1.320 GO:0000387 ... O14744 36545438
    762792 7zvv:A (1.75) BS01 3CF 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004252 ... Q32ZE1 38809037
    762793 7zvv:B (1.75) BS01 V7T 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003723 ... Q32ZE1 38809037
    762794 7zvv:B (1.75) BS02 4CF 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003723 ... Q32ZE1 38809037
    762795 7zvv:B (1.75) BS03 3CF 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003723 ... Q32ZE1 38809037
    762796 7zvw:B (3.4) BS01 ATP 3.6.4.- GO:0005524 ... Q9P4D1 37550452
    762797 7zvw:G (3.4) BS01 ATP ? GO:0000785 ... C4QXM9 37550452
    762798 7zvw:G (3.4) BS02 MG ? GO:0000785 ... C4QXM9 37550452
    762799 7zvx:A (2.4) BS01 rna ? GO:0001525 ... P07355 36124719
    762800 7zvx:A (2.4) BS02 CA ? GO:0001525 ... P07355 36124719

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).