SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    762801 7zvx:A (2.4) BS03 CA ? GO:0001525 ... P07355 36124719
    762802 7zvx:A (2.4) BS04 CA ? GO:0001525 ... P07355 36124719
    762803 7zvx:A (2.4) BS05 CA ? GO:0001525 ... P07355 36124719
    762804 7zvx:B (2.4) BS01 rna ? GO:0001525 ... P07355 36124719
    762805 7zvx:B (2.4) BS02 CA ? GO:0001525 ... P07355 36124719
    762806 7zvx:B (2.4) BS03 CA ? GO:0001525 ... P07355 36124719
    762807 7zvx:B (2.4) BS04 CA ? GO:0001525 ... P07355 36124719
    762808 7zvx:B (2.4) BS05 CA ? GO:0001525 ... P07355 36124719
    762809 7zvx:B (2.4) BS06 CA ? GO:0001525 ... P07355 36124719
    762810 7zvx:B (2.4) BS07 CA ? GO:0001525 ... P07355 36124719
    762811 7zvy:A (2.16) BS01 ZN ? N/A Q5JD98 35955607
    762812 7zvz:A (1.68) BS01 HEC ? GO:0046872 ... G1UBD5 37100286
    762813 7zvz:B (1.68) BS01 HEC ? GO:0046872 ... G1UBD5 37100286
    762814 7zw0:LB (2.4) BS01 rna ? GO:0000055 ... P0CX43 36113412
    762815 7zw0:LE (2.4) BS01 rna ? GO:0002181 ... P0CX45 36113412
    762816 7zw0:LE (2.4) BS02 rna ? GO:0002181 ... P0CX45 36113412
    762817 7zw0:LE (2.4) BS03 MG ? GO:0002181 ... P0CX45 36113412
    762818 7zw0:LE (2.4) BS04 MG ? GO:0002181 ... P0CX45 36113412
    762819 7zw0:LF (2.4) BS01 rna ? GO:0000027 ... P14126 36113412
    762820 7zw0:LF (2.4) BS02 MG ? GO:0000027 ... P14126 36113412
    762821 7zw0:LG (2.4) BS01 rna ? GO:0002181 ... P10664 36113412
    762822 7zw0:LG (2.4) BS02 rna ? GO:0002181 ... P10664 36113412
    762823 7zw0:LH (2.4) BS01 rna ? GO:0000027 ... P26321 36113412
    762824 7zw0:LH (2.4) BS02 rna ? GO:0000027 ... P26321 36113412
    762825 7zw0:LI (2.4) BS01 rna ? GO:0000027 ... P05739 36113412
    762826 7zw0:LJ (2.4) BS01 rna ? GO:0000463 ... P05737 36113412
    762827 7zw0:LJ (2.4) BS02 rna ? GO:0000463 ... P05737 36113412
    762828 7zw0:LK (2.4) BS01 rna ? GO:0000470 ... P17076 36113412
    762829 7zw0:LK (2.4) BS02 rna ? GO:0000470 ... P17076 36113412
    762830 7zw0:LL (2.4) BS01 rna ? GO:0002181 ... P05738 36113412
    762831 7zw0:LM (2.4) BS01 rna ? GO:0000027 ... P41805 36113412
    762832 7zw0:LM (2.4) BS02 rna ? GO:0000027 ... P41805 36113412
    762833 7zw0:LN (2.4) BS01 rna ? GO:0000027 ... P0C0W9 36113412
    762834 7zw0:LN (2.4) BS02 rna ? GO:0000027 ... P0C0W9 36113412
    762835 7zw0:LO (2.4) BS01 rna ? GO:0002181 ... Q12690 36113412
    762836 7zw0:LO (2.4) BS02 rna ? GO:0002181 ... Q12690 36113412
    762837 7zw0:LP (2.4) BS01 rna ? GO:0000027 ... P36105 36113412
    762838 7zw0:LQ (2.4) BS01 rna ? GO:0002181 ... P05748 36113412
    762839 7zw0:LQ (2.4) BS02 rna ? GO:0002181 ... P05748 36113412
    762840 7zw0:LR (2.4) BS01 rna ? GO:0000470 ... P26784 36113412
    762841 7zw0:LS (2.4) BS01 rna ? GO:0000448 ... P05740 36113412
    762842 7zw0:LS (2.4) BS02 rna ? GO:0000448 ... P05740 36113412
    762843 7zw0:LT (2.4) BS01 rna ? GO:0002181 ... P0CX49 36113412
    762844 7zw0:LU (2.4) BS01 rna ? GO:0002181 ... P0CX82 36113412
    762845 7zw0:LU (2.4) BS02 rna ? GO:0002181 ... P0CX82 36113412
    762846 7zw0:LV (2.4) BS01 rna ? GO:0002181 ... P0CX23 36113412
    762847 7zw0:LV (2.4) BS02 rna ? GO:0002181 ... P0CX23 36113412
    762848 7zw0:LW (2.4) BS01 rna ? GO:0002181 ... Q02753 36113412
    762849 7zw0:LW (2.4) BS02 rna ? GO:0002181 ... Q02753 36113412
    762850 7zw0:LX (2.4) BS01 rna ? GO:0002181 ... P05749 36113412
    762851 7zw0:LY (2.4) BS01 rna ? GO:0002181 ... P0CX41 36113412
    762852 7zw0:LZ (2.4) BS01 rna ? GO:0002181 ... P04449 36113412
    762853 7zw0:LZ (2.4) BS02 rna ? GO:0002181 ... P04449 36113412
    762854 7zw0:La (2.4) BS01 rna ? GO:0000027 ... P04456 36113412
    762855 7zw0:La (2.4) BS02 rna ? GO:0000027 ... P04456 36113412
    762856 7zw0:Lb (2.4) BS01 rna ? GO:0002181 ... P05743 36113412
    762857 7zw0:Lb (2.4) BS02 rna ? GO:0002181 ... P05743 36113412
    762858 7zw0:Lc (2.4) BS01 rna ? GO:0002181 ... P0C2H6 36113412
    762859 7zw0:Ld (2.4) BS01 rna ? GO:0002181 ... P02406 36113412
    762860 7zw0:Le (2.4) BS01 rna ? GO:0002181 ... P05747 36113412
    762861 7zw0:Lf (2.4) BS01 rna ? GO:0002181 ... P14120 36113412
    762862 7zw0:Lg (2.4) BS01 rna ? GO:0002181 ... P0C2H8 36113412
    762863 7zw0:Lh (2.4) BS01 rna ? GO:0002181 ... P38061 36113412
    762864 7zw0:Lh (2.4) BS02 MG ? GO:0002181 ... P38061 36113412
    762865 7zw0:Li (2.4) BS01 rna ? GO:0000027 ... P05744 36113412
    762866 7zw0:Lj (2.4) BS01 rna ? GO:0002181 ... P87262 36113412
    762867 7zw0:Lj (2.4) BS02 ZN ? GO:0002181 ... P87262 36113412
    762868 7zw0:Lj (2.4) BS03 MG ? GO:0002181 ... P87262 36113412
    762869 7zw0:Lk (2.4) BS01 rna ? GO:0000463 ... P0CX84 36113412
    762870 7zw0:Lk (2.4) BS02 rna ? GO:0000463 ... P0CX84 36113412
    762871 7zw0:Ll (2.4) BS01 rna ? GO:0002181 ... P05745 36113412
    762872 7zw0:Lm (2.4) BS01 rna ? GO:0000448 ... P49166 36113412
    762873 7zw0:Lm (2.4) BS02 rna ? GO:0000448 ... P49166 36113412
    762874 7zw0:Lm (2.4) BS03 ZN ? GO:0000448 ... P49166 36113412
    762875 7zw0:Ln (2.4) BS01 rna ? GO:0002181 ... P49167 36113412
    762876 7zw0:Lo (2.4) BS01 rna ? GO:0002181 ... P04650 36113412
    762877 7zw0:Lo (2.4) BS02 rna ? GO:0002181 ... P04650 36113412
    762878 7zw0:Lp (2.4) BS01 rna ? GO:0003735 ... P0CH08 36113412
    762879 7zw0:Lp (2.4) BS02 ZN ? GO:0003735 ... P0CH08 36113412
    762880 7zw0:Lr (2.4) BS01 rna ? GO:0002181 ... P0CX27 36113412
    762881 7zw0:Lr (2.4) BS02 rna ? GO:0002181 ... P0CX27 36113412
    762882 7zw0:Lr (2.4) BS03 ZN ? GO:0002181 ... P0CX27 36113412
    762883 7zw0:Ls (2.4) BS01 rna ? GO:0002181 ... P0CX25 36113412
    762884 7zw0:Ls (2.4) BS02 ZN ? GO:0002181 ... P0CX25 36113412
    762885 7zw0:sA (2.4) BS01 rna ? GO:0000054 ... P05750 36113412
    762886 7zw0:sA (2.4) BS02 rna ? GO:0000054 ... P05750 36113412
    762887 7zw0:sB (2.4) BS01 rna ? GO:0000028 ... P26783 36113412
    762888 7zw0:sB (2.4) BS02 rna ? GO:0000028 ... P26783 36113412
    762889 7zw0:sB (2.4) BS03 MG ? GO:0000028 ... P26783 36113412
    762890 7zw0:sC (2.4) BS01 rna ? GO:0000054 ... Q08745 36113412
    762891 7zw0:sD (2.4) BS01 rna ? GO:0000028 ... P48589 36113412
    762892 7zw0:sE (2.4) BS01 rna ? GO:0000028 ... Q01855 36113412
    762893 7zw0:sF (2.4) BS01 rna ? GO:0000462 ... P0CX51 36113412
    762894 7zw0:sG (2.4) BS01 rna ? GO:0000028 ... P02407 36113412
    762895 7zw0:sH (2.4) BS01 rna ? GO:0000054 ... P0CX55 36113412
    762896 7zw0:sI (2.4) BS01 rna ? GO:0000028 ... P07280 36113412
    762897 7zw0:sJ (2.4) BS01 rna ? GO:0000462 ... P38701 36113412
    762898 7zw0:sK (2.4) BS01 rna ? GO:0002181 ... Q3E792 36113412
    762899 7zw0:sL (2.4) BS01 rna ? GO:0000028 ... Q3E7X9 36113412
    762900 7zw0:sL (2.4) BS02 rna ? GO:0000028 ... Q3E7X9 36113412
    762901 7zw0:sM (2.4) BS01 rna ? GO:0002181 ... P41057 36113412
    762902 7zw0:sM (2.4) BS02 ZN ? GO:0002181 ... P41057 36113412
    762903 7zw0:sN (2.4) BS01 rna ? GO:0003735 ... P05759 36113412
    762904 7zw0:sN (2.4) BS02 ZN ? GO:0003735 ... P05759 36113412
    762905 7zw0:sO (2.4) BS01 rna ? GO:0001965 ... P38011 36113412
    762906 7zw0:sP (2.4) BS01 rna ? GO:0000028 ... P32905 36113412
    762907 7zw0:sQ (2.4) BS01 rna ? GO:0000462 ... P33442 36113412
    762908 7zw0:sQ (2.4) BS02 rna ? GO:0000462 ... P33442 36113412
    762909 7zw0:sR (2.4) BS01 rna ? GO:0000054 ... P25443 36113412
    762910 7zw0:sR (2.4) BS02 rna ? GO:0000054 ... P25443 36113412
    762911 7zw0:sS (2.4) BS01 rna ? GO:0002181 ... P0CX36 36113412
    762912 7zw0:sS (2.4) BS02 MG ? GO:0002181 ... P0CX36 36113412
    762913 7zw0:sT (2.4) BS01 rna ? GO:0000462 ... P0CX38 36113412
    762914 7zw0:sU (2.4) BS01 rna ? GO:0002181 ... P26786 36113412
    762915 7zw0:sV (2.4) BS01 rna ? GO:0000462 ... P0CX39 36113412
    762916 7zw0:sV (2.4) BS02 rna ? GO:0000462 ... P0CX39 36113412
    762917 7zw0:sW (2.4) BS01 rna ? GO:0000462 ... O13516 36113412
    762918 7zw0:sX (2.4) BS01 rna ? GO:0000028 ... P0CX47 36113412
    762919 7zw0:sY (2.4) BS01 rna ? GO:0000462 ... P05756 36113412
    762920 7zw0:sZ (2.4) BS01 rna ? GO:0000028 ... P06367 36113412
    762921 7zw0:sb (2.4) BS01 rna ? GO:0002181 ... P0C0W1 36113412
    762922 7zw0:sc (2.4) BS01 rna ? GO:0000462 ... P0CX29 36113412
    762923 7zw0:sc (2.4) BS02 MG ? GO:0000462 ... P0CX29 36113412
    762924 7zw0:sd (2.4) BS01 rna ? GO:0000462 ... P0CX31 36113412
    762925 7zw0:se (2.4) BS01 rna ? GO:0000054 ... P39938 36113412
    762926 7zw0:se (2.4) BS02 rna ? GO:0000054 ... P39938 36113412
    762927 7zw0:sf (2.4) BS01 rna ? GO:0000028 ... P35997 36113412
    762928 7zw0:sg (2.4) BS01 rna ? GO:0002181 ... P0CX33 36113412
    762929 7zw0:sh (2.4) BS01 rna ? GO:0003676 ... N/A 36113412
    762930 7zw0:sh (2.4) BS02 rna ? GO:0003676 ... N/A 36113412
    762931 7zw0:sh (2.4) BS03 ZN ? GO:0003676 ... N/A 36113412
    762932 7zw0:sh (2.4) BS04 ZN ? GO:0003676 ... N/A 36113412
    762933 7zw0:sh (2.4) BS05 ZN ? GO:0003676 ... N/A 36113412
    762934 7zw0:sh (2.4) BS06 ZN ? GO:0003676 ... N/A 36113412
    762935 7zw0:sh (2.4) BS07 ZN ? GO:0003676 ... N/A 36113412
    762936 7zw0:sh (2.4) BS08 ZN ? GO:0003676 ... N/A 36113412
    762937 7zw0:sh (2.4) BS09 ZN ? GO:0003676 ... N/A 36113412
    762938 7zw0:sh (2.4) BS10 ZN ? GO:0003676 ... N/A 36113412
    762939 7zw0:sh (2.4) BS11 ZN ? GO:0003676 ... N/A 36113412
    762940 7zw0:sh (2.4) BS12 ZN ? GO:0003676 ... N/A 36113412
    762941 7zw0:sh (2.4) BS13 ZN ? GO:0003676 ... N/A 36113412
    762942 7zw0:sh (2.4) BS14 ZN ? GO:0003676 ... N/A 36113412
    762943 7zw0:sh (2.4) BS15 ZN ? GO:0003676 ... N/A 36113412
    762944 7zw0:sh (2.4) BS16 ZN ? GO:0003676 ... N/A 36113412
    762945 7zw0:sh (2.4) BS17 ZN ? GO:0003676 ... N/A 36113412
    762946 7zw0:sh (2.4) BS18 ZN ? GO:0003676 ... N/A 36113412
    762947 7zw0:sh (2.4) BS19 ZN ? GO:0003676 ... N/A 36113412
    762948 7zw0:sh (2.4) BS20 ZN ? GO:0003676 ... N/A 36113412
    762949 7zw0:sh (2.4) BS21 ZN ? GO:0003676 ... N/A 36113412
    762950 7zw0:sh (2.4) BS22 ZN ? GO:0003676 ... N/A 36113412
    762951 7zw0:sh (2.4) BS23 ZN ? GO:0003676 ... N/A 36113412
    762952 7zw0:sh (2.4) BS24 ZN ? GO:0003676 ... N/A 36113412
    762953 7zw0:sh (2.4) BS25 ZN ? GO:0003676 ... N/A 36113412
    762954 7zw0:sh (2.4) BS26 ZN ? GO:0003676 ... N/A 36113412
    762955 7zw0:sh (2.4) BS27 ZN ? GO:0003676 ... N/A 36113412
    762956 7zw0:sh (2.4) BS28 ZN ? GO:0003676 ... N/A 36113412
    762957 7zw0:sh (2.4) BS29 ZN ? GO:0003676 ... N/A 36113412
    762958 7zw3:AAA (2.0) BS01 FAD 1.4.3.21
    1.4.3.4
    GO:0005515 ... P27338 37250172
    762959 7zw3:AAA (2.0) BS02 C15 1.4.3.21
    1.4.3.4
    GO:0005515 ... P27338 37250172
    762960 7zw3:AAA (2.0) BS03 AI0 1.4.3.21
    1.4.3.4
    GO:0005515 ... P27338 37250172
    762961 7zw3:BBB (2.0) BS01 FAD 1.4.3.21
    1.4.3.4
    GO:0005515 ... P27338 37250172
    762962 7zw3:BBB (2.0) BS02 AI0 1.4.3.21
    1.4.3.4
    GO:0005515 ... P27338 37250172
    762963 7zw4:A (2.72) BS01 peptide ? GO:0003779 ... P26039 38587458
    762964 7zw5:A (1.38) BS01 JG0 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004252 ... Q32ZE1 38809037
    762965 7zw5:B (1.38) BS01 JG0 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003723 ... Q32ZE1 38809037
    762966 7zw7:A (2.85) BS01 ZN 3.5.1.98 GO:0004407 ... A0A3Q0KJ63 N/A
    762967 7zw8:A (2.119) BS01 K3R 2.7.10.1 GO:0004672 ... P10721 36728508
    762968 7zw9:A (2.1) BS01 ZN ? GO:0046872 ... Q63SQ4 36016712
    762969 7zwa:A (2.8) BS01 peptide 3.6.4.-
    4.2.99.-
    GO:0000723 ... P12956 37256950
    762970 7zwa:A (2.8) BS02 dna 3.6.4.-
    4.2.99.-
    GO:0000723 ... P12956 37256950
    762971 7zwa:A (2.8) BS03 dna 3.6.4.-
    4.2.99.-
    GO:0000723 ... P12956 37256950
    762972 7zwa:B (2.8) BS01 peptide 3.6.4.- GO:0000723 ... P13010 37256950
    762973 7zwa:B (2.8) BS02 dna 3.6.4.- GO:0000723 ... P13010 37256950
    762974 7zwa:B (2.8) BS03 dna 3.6.4.- GO:0000723 ... P13010 37256950
    762975 7zwb:AAA (1.48) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 37436184
    762976 7zwb:AAA (1.48) BS02 K7P 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 37436184
    762977 7zwb:AAA (1.48) BS03 K7P 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 37436184
    762978 7zwc:M (3.2) BS01 dna 2.3.1.48 GO:0000776 ... Q00403 36424526
    762979 7zwc:M (3.2) BS02 dna 2.3.1.48 GO:0000776 ... Q00403 36424526
    762980 7zwc:O (3.2) BS01 dna ? GO:0000785 ... P20226 36424526
    762981 7zwc:O (3.2) BS02 dna ? GO:0000785 ... P20226 36424526
    762982 7zwc:U (3.2) BS01 dna ? GO:0000979 ... P52655 36424526
    762983 7zwc:b (3.2) BS01 dna ? GO:0000978 ... Q92966 36424526
    762984 7zwc:b (3.2) BS02 dna ? GO:0000978 ... Q92966 36424526
    762985 7zwc:b (3.2) BS03 ZN ? GO:0000978 ... Q92966 36424526
    762986 7zwc:b (3.2) BS04 ZN ? GO:0000978 ... Q92966 36424526
    762987 7zwc:c (3.2) BS01 dna ? GO:0000978 ... Q5SXM2 36424526
    762988 7zwc:c (3.2) BS02 dna ? GO:0000978 ... Q5SXM2 36424526
    762989 7zwd:A (3.0) BS01 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 36424526
    762990 7zwd:A (3.0) BS02 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 36424526
    762991 7zwd:A (3.0) BS03 MG 2.7.7.6 GO:0000428 ... A0A8D1DPV6 36424526
    762992 7zwd:B (3.0) BS01 ZN 2.7.7.6 GO:0000428 ... I3LGP4 36424526
    762993 7zwd:C (3.0) BS01 ZN ? GO:0000428 ... I3LCH3 36424526
    762994 7zwd:I (3.0) BS01 ZN ? GO:0000428 ... P60899 36424526
    762995 7zwd:I (3.0) BS02 ZN ? GO:0000428 ... P60899 36424526
    762996 7zwd:J (3.0) BS01 ZN ? GO:0000428 ... A0A4X1VYD0 36424526
    762997 7zwd:L (3.0) BS01 ZN ? GO:0001054 ... A0A4X1TRS6 36424526
    762998 7zwd:M (3.0) BS01 dna 2.3.1.48 GO:0000776 ... Q00403 36424526
    762999 7zwd:M (3.0) BS02 ZN 2.3.1.48 GO:0000776 ... Q00403 36424526
    763000 7zwd:O (3.0) BS01 dna ? GO:0000785 ... P20226 36424526

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).