SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    765401 8aa3:J (2.7) BS02 FRU ? GO:0009279 ... Q8A6W4 37286596
    765402 8aa3:J (2.7) BS03 FRU ? GO:0009279 ... Q8A6W4 37286596
    765403 8aa3:J (2.7) BS04 MG ? GO:0009279 ... Q8A6W4 37286596
    765404 8aa5:AP1 (2.46) BS01 dna N/A GO:0003676 ... N/A 36184667
    765405 8aa5:AP1 (2.46) BS02 dna N/A GO:0003676 ... N/A 36184667
    765406 8aa5:AP1 (2.46) BS03 dna N/A GO:0003676 ... N/A 36184667
    765407 8aa5:AP1 (2.46) BS04 dna N/A GO:0003676 ... N/A 36184667
    765408 8aa5:AP1 (2.46) BS05 dna N/A GO:0003676 ... N/A 36184667
    765409 8aa5:BP1 (2.46) BS01 dna N/A GO:0003676 ... N/A 36184667
    765410 8aa5:BP1 (2.46) BS02 dna N/A GO:0003676 ... N/A 36184667
    765411 8aa5:BP1 (2.46) BS03 dna N/A GO:0003676 ... N/A 36184667
    765412 8aa5:BP1 (2.46) BS04 dna N/A GO:0003676 ... N/A 36184667
    765413 8aa5:BP1 (2.46) BS05 dna N/A GO:0003676 ... N/A 36184667
    765414 8aa5:CP1 (2.46) BS01 dna N/A GO:0003676 ... N/A 36184667
    765415 8aa5:CP1 (2.46) BS02 dna N/A GO:0003676 ... N/A 36184667
    765416 8aa5:DP1 (2.46) BS01 dna N/A GO:0003676 ... N/A 36184667
    765417 8aa5:DP1 (2.46) BS02 dna N/A GO:0003676 ... N/A 36184667
    765418 8aa6:A (1.15) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 36594655
    765419 8aa6:A (1.15) BS02 LD3 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 36594655
    765420 8aa7:A (2.05) BS01 WYH 1.14.-.- GO:0004497 ... A0A380DQV1 N/A
    765421 8aa7:A (2.05) BS02 HEM 1.14.-.- GO:0004497 ... A0A380DQV1 N/A
    765422 8aaa:A (1.9) BS01 peptide ? N/A P0DTC2 37328472
    765423 8aae:A (1.15) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 36594655
    765424 8aae:A (1.15) BS02 P8B 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 36594655
    765425 8aaf:0 (2.5) BS01 rna ? GO:0000027 ... P05317 36804914
    765426 8aaf:A (2.5) BS01 rna ? GO:0002181 ... P05748 36804914
    765427 8aaf:A (2.5) BS02 rna ? GO:0002181 ... P05748 36804914
    765428 8aaf:B (2.5) BS01 rna ? GO:0000470 ... P26784 36804914
    765429 8aaf:C (2.5) BS01 rna ? GO:0000448 ... P05740 36804914
    765430 8aaf:C (2.5) BS02 rna ? GO:0000448 ... P05740 36804914
    765431 8aaf:D (2.5) BS01 rna ? GO:0002181 ... P0CX49 36804914
    765432 8aaf:E (2.5) BS01 rna ? GO:0002181 ... P0CX82 36804914
    765433 8aaf:F (2.5) BS01 rna ? GO:0002181 ... P0CX23 36804914
    765434 8aaf:F (2.5) BS02 rna ? GO:0002181 ... P0CX23 36804914
    765435 8aaf:G (2.5) BS01 rna ? GO:0002181 ... Q02753 36804914
    765436 8aaf:G (2.5) BS02 rna ? GO:0002181 ... Q02753 36804914
    765437 8aaf:H (2.5) BS01 rna ? GO:0002181 ... P05749 36804914
    765438 8aaf:I (2.5) BS01 rna ? GO:0002181 ... P0CX41 36804914
    765439 8aaf:J (2.5) BS01 rna ? GO:0002181 ... P04449 36804914
    765440 8aaf:K (2.5) BS01 rna ? GO:0000027 ... P04456 36804914
    765441 8aaf:K (2.5) BS02 rna ? GO:0000027 ... P04456 36804914
    765442 8aaf:L (2.5) BS01 rna ? GO:0002181 ... P05743 36804914
    765443 8aaf:L (2.5) BS02 rna ? GO:0002181 ... P05743 36804914
    765444 8aaf:M (2.5) BS01 rna ? GO:0002181 ... P0C2H6 36804914
    765445 8aaf:N (2.5) BS01 rna ? GO:0002181 ... P02406 36804914
    765446 8aaf:O (2.5) BS01 rna ? GO:0002181 ... P05747 36804914
    765447 8aaf:P (2.5) BS01 rna ? GO:0002181 ... P14120 36804914
    765448 8aaf:Q (2.5) BS01 rna ? GO:0002181 ... P0C2H8 36804914
    765449 8aaf:R (2.5) BS01 rna ? GO:0002181 ... P38061 36804914
    765450 8aaf:R (2.5) BS02 MG ? GO:0002181 ... P38061 36804914
    765451 8aaf:S (2.5) BS01 rna ? GO:0000027 ... P05744 36804914
    765452 8aaf:T (2.5) BS01 rna ? GO:0002181 ... P87262 36804914
    765453 8aaf:T (2.5) BS02 ZN ? GO:0002181 ... P87262 36804914
    765454 8aaf:U (2.5) BS01 rna ? GO:0000463 ... P0CX84 36804914
    765455 8aaf:U (2.5) BS02 rna ? GO:0000463 ... P0CX84 36804914
    765456 8aaf:V (2.5) BS01 rna ? GO:0002181 ... P05745 36804914
    765457 8aaf:W (2.5) BS01 rna ? GO:0000448 ... P49166 36804914
    765458 8aaf:W (2.5) BS02 rna ? GO:0000448 ... P49166 36804914
    765459 8aaf:W (2.5) BS03 ZN ? GO:0000448 ... P49166 36804914
    765460 8aaf:X (2.5) BS01 rna ? GO:0002181 ... P49167 36804914
    765461 8aaf:Y (2.5) BS01 rna ? GO:0002181 ... P04650 36804914
    765462 8aaf:Y (2.5) BS02 rna ? GO:0002181 ... P04650 36804914
    765463 8aaf:Z (2.5) BS01 rna ? GO:0000027 ... P0CH08 36804914
    765464 8aaf:Z (2.5) BS02 ZN ? GO:0000027 ... P0CH08 36804914
    765465 8aaf:a (2.5) BS01 rna ? GO:0000049 ... Q12532 36804914
    765466 8aaf:a (2.5) BS02 rna ? GO:0000049 ... Q12532 36804914
    765467 8aaf:a (2.5) BS03 rna ? GO:0000049 ... Q12532 36804914
    765468 8aaf:b (2.5) BS01 rna ? GO:0002181 ... P0CX27 36804914
    765469 8aaf:b (2.5) BS02 ZN ? GO:0002181 ... P0CX27 36804914
    765470 8aaf:c (2.5) BS01 rna ? GO:0002181 ... P0CX25 36804914
    765471 8aaf:c (2.5) BS02 ZN ? GO:0002181 ... P0CX25 36804914
    765472 8aaf:e (2.5) BS01 rna 2.3.2.27 GO:0000781 ... Q04781 36804914
    765473 8aaf:e (2.5) BS02 ZN 2.3.2.27 GO:0000781 ... Q04781 36804914
    765474 8aaf:e (2.5) BS03 ZN 2.3.2.27 GO:0000781 ... Q04781 36804914
    765475 8aaf:g (2.5) BS01 rna ? GO:0000054 ... Q12522 36804914
    765476 8aaf:j (2.5) BS01 rna ? GO:0002181 ... P0CX45 36804914
    765477 8aaf:j (2.5) BS02 MG ? GO:0002181 ... P0CX45 36804914
    765478 8aaf:k (2.5) BS01 rna ? GO:0000027 ... P14126 36804914
    765479 8aaf:k (2.5) BS02 MG ? GO:0000027 ... P14126 36804914
    765480 8aaf:l (2.5) BS01 rna ? GO:0002181 ... P10664 36804914
    765481 8aaf:l (2.5) BS02 rna ? GO:0002181 ... P10664 36804914
    765482 8aaf:m (2.5) BS01 rna ? GO:0000027 ... P26321 36804914
    765483 8aaf:m (2.5) BS02 rna ? GO:0000027 ... P26321 36804914
    765484 8aaf:n (2.5) BS01 rna ? GO:0000027 ... P05739 36804914
    765485 8aaf:o (2.5) BS01 rna ? GO:0000463 ... P05737 36804914
    765486 8aaf:o (2.5) BS02 rna ? GO:0000463 ... P05737 36804914
    765487 8aaf:p (2.5) BS01 rna ? GO:0000470 ... P17076 36804914
    765488 8aaf:p (2.5) BS02 rna ? GO:0000470 ... P17076 36804914
    765489 8aaf:q (2.5) BS01 rna ? GO:0002181 ... P05738 36804914
    765490 8aaf:r (2.5) BS01 rna ? GO:0000027 ... P41805 36804914
    765491 8aaf:r (2.5) BS02 rna ? GO:0000027 ... P41805 36804914
    765492 8aaf:r (2.5) BS03 rna ? GO:0000027 ... P41805 36804914
    765493 8aaf:s (2.5) BS01 rna ? GO:0000027 ... P0C0W9 36804914
    765494 8aaf:s (2.5) BS02 rna ? GO:0000027 ... P0C0W9 36804914
    765495 8aaf:s (2.5) BS03 rna ? GO:0000027 ... P0C0W9 36804914
    765496 8aaf:t (2.5) BS01 rna ? GO:0002181 ... Q12690 36804914
    765497 8aaf:t (2.5) BS02 rna ? GO:0002181 ... Q12690 36804914
    765498 8aaf:u (2.5) BS01 rna ? GO:0000027 ... P36105 36804914
    765499 8aaf:v (2.5) BS01 rna ? GO:0002182 ... P23301 36804914
    765500 8aaf:w (2.5) BS01 rna ? GO:0000055 ... P0CX43 36804914
    765501 8aaf:z (2.5) BS01 rna ? GO:0000027 ... P0CX53 36804914
    765502 8aag:A (10.0) BS01 dna ? GO:0000786 ... Q71DI3 36610392
    765503 8aag:A (10.0) BS02 dna ? GO:0000786 ... Q71DI3 36610392
    765504 8aag:B (10.0) BS01 dna ? GO:0000781 ... P62805 36610392
    765505 8aag:B (10.0) BS02 dna ? GO:0000781 ... P62805 36610392
    765506 8aag:C (10.0) BS01 dna ? GO:0000786 ... P06897 36610392
    765507 8aag:C (10.0) BS02 dna ? GO:0000786 ... P06897 36610392
    765508 8aag:D (10.0) BS01 dna ? GO:0000786 ... P02281 36610392
    765509 8aag:D (10.0) BS02 dna ? GO:0000786 ... P02281 36610392
    765510 8aag:E (10.0) BS01 dna ? GO:0000786 ... Q71DI3 36610392
    765511 8aag:E (10.0) BS02 dna ? GO:0000786 ... Q71DI3 36610392
    765512 8aag:F (10.0) BS01 dna ? GO:0000781 ... P62805 36610392
    765513 8aag:F (10.0) BS02 dna ? GO:0000781 ... P62805 36610392
    765514 8aag:G (10.0) BS01 dna ? GO:0000786 ... P06897 36610392
    765515 8aag:G (10.0) BS02 dna ? GO:0000786 ... P06897 36610392
    765516 8aag:H (10.0) BS01 dna ? GO:0000786 ... P02281 36610392
    765517 8aag:H (10.0) BS02 dna ? GO:0000786 ... P02281 36610392
    765518 8aag:Z (10.0) BS01 dna ? GO:0000786 ... P22844 36610392
    765519 8aag:Z (10.0) BS02 dna ? GO:0000786 ... P22844 36610392
    765520 8aai:A (2.76) BS01 LKV ? N/A O00560 36939673
    765521 8aai:B (2.76) BS01 LKV ? N/A O00560 36939673
    765522 8aai:C (2.76) BS01 LKV ? N/A O00560 36939673
    765523 8aai:C (2.76) BS02 LKV ? N/A O00560 36939673
    765524 8aai:D (2.76) BS01 LKV ? N/A O00560 36939673
    765525 8aaj:A (3.7) BS01 ZN ? GO:0000724 ... Q9V1Y9 37087464
    765526 8aak:A (2.554) BS01 LL6 ? N/A O00560 36939673
    765527 8aak:B (2.554) BS01 LL6 ? N/A O00560 36939673
    765528 8aam:M (2.29) BS01 ADP ? GO:0000902 ... A0A150MJ77 N/A
    765529 8aan:A (2.19) BS01 dna ? GO:0003677 ... P03856 37713613
    765530 8aan:A (2.19) BS02 dna ? GO:0003677 ... P03856 37713613
    765531 8aan:A (2.19) BS03 dna ? GO:0003677 ... P03856 37713613
    765532 8aan:A (2.19) BS04 MG ? GO:0003677 ... P03856 37713613
    765533 8aao:A (2.469) BS01 LN2 ? N/A O00560 36939673
    765534 8aao:B (2.469) BS01 LN2 ? N/A O00560 36939673
    765535 8aap:A (2.174) BS01 LLV ? N/A O00560 36939673
    765536 8aap:B (2.174) BS01 LLV ? N/A O00560 36939673
    765537 8aas:A (3.2) BS01 dna ? GO:0003676 ... G8ZHS0 37087464
    765538 8aas:A (3.2) BS02 ZN ? GO:0003676 ... G8ZHS0 37087464
    765539 8aas:A (3.2) BS03 CA ? GO:0003676 ... G8ZHS0 37087464
    765540 8aas:B (3.2) BS01 dna ? GO:0003676 ... Q9V1Z1 37087464
    765541 8aat:A (2.3) BS01 PLP 2.6.1.1
    2.6.1.7
    GO:0003824 ... P00508 1593633
    765542 8aat:B (2.3) BS01 PLP 2.6.1.1
    2.6.1.7
    GO:0003824 ... P00508 1593633
    765543 8aau:L (1.74) BS01 LH0 2.7.11.1 GO:0004672 ... P53667 36136092
    765544 8aau:L (1.74) BS02 MG 2.7.11.1 GO:0004672 ... P53667 36136092
    765545 8aav:A (2.0) BS01 O3K 1.16.3.1 GO:0004322 ... P02794 36504125
    765546 8aav:A (2.0) BS02 O3K 1.16.3.1 GO:0004322 ... P02794 36504125
    765547 8aav:A (2.0) BS03 FE 1.16.3.1 GO:0004322 ... P02794 36504125
    765548 8aav:A (2.0) BS04 MG 1.16.3.1 GO:0004322 ... P02794 36504125
    765549 8aav:B (2.0) BS01 O3K 1.16.3.1 GO:0004322 ... P02794 36504125
    765550 8aav:B (2.0) BS02 O3K 1.16.3.1 GO:0004322 ... P02794 36504125
    765551 8aav:B (2.0) BS03 FE 1.16.3.1 GO:0004322 ... P02794 36504125
    765552 8aav:C (2.0) BS01 O3K 1.16.3.1 GO:0004322 ... P02794 36504125
    765553 8aav:C (2.0) BS02 O3K 1.16.3.1 GO:0004322 ... P02794 36504125
    765554 8aav:C (2.0) BS03 FE 1.16.3.1 GO:0004322 ... P02794 36504125
    765555 8aav:D (2.0) BS01 O3K 1.16.3.1 GO:0004322 ... P02794 36504125
    765556 8aav:D (2.0) BS02 O3K 1.16.3.1 GO:0004322 ... P02794 36504125
    765557 8aav:D (2.0) BS03 FE 1.16.3.1 GO:0004322 ... P02794 36504125
    765558 8aav:E (2.0) BS01 O3K 1.16.3.1 GO:0004322 ... P02794 36504125
    765559 8aav:E (2.0) BS02 O3K 1.16.3.1 GO:0004322 ... P02794 36504125
    765560 8aav:E (2.0) BS03 FE 1.16.3.1 GO:0004322 ... P02794 36504125
    765561 8aav:F (2.0) BS01 O3K 1.16.3.1 GO:0004322 ... P02794 36504125
    765562 8aav:F (2.0) BS02 O3K 1.16.3.1 GO:0004322 ... P02794 36504125
    765563 8aav:F (2.0) BS03 FE 1.16.3.1 GO:0004322 ... P02794 36504125
    765564 8aav:F (2.0) BS04 MG 1.16.3.1 GO:0004322 ... P02794 36504125
    765565 8aav:G (2.0) BS01 O3K 1.16.3.1 GO:0004322 ... P02794 36504125
    765566 8aav:G (2.0) BS02 O3K 1.16.3.1 GO:0004322 ... P02794 36504125
    765567 8aav:G (2.0) BS03 FE 1.16.3.1 GO:0004322 ... P02794 36504125
    765568 8aav:G (2.0) BS04 MG 1.16.3.1 GO:0004322 ... P02794 36504125
    765569 8aav:H (2.0) BS01 O3K 1.16.3.1 GO:0004322 ... P02794 36504125
    765570 8aav:H (2.0) BS02 O3K 1.16.3.1 GO:0004322 ... P02794 36504125
    765571 8aav:H (2.0) BS03 FE 1.16.3.1 GO:0004322 ... P02794 36504125
    765572 8aav:H (2.0) BS04 MG 1.16.3.1 GO:0004322 ... P02794 36504125
    765573 8aaz:A (1.27) BS01 ATP 3.2.1.17 GO:0003796 ... P00698 36608272
    765574 8aaz:A (1.27) BS02 ATP 3.2.1.17 GO:0003796 ... P00698 36608272
    765575 8aaz:A (1.27) BS03 ATP 3.2.1.17 GO:0003796 ... P00698 36608272
    765576 8ab0:D (6.09) BS01 ZN ? GO:0003677 ... Q5SHY0 37081315
    765577 8ab0:E (6.09) BS01 ZN ? GO:0003677 ... Q5SHY0 37081315
    765578 8ab0:F (6.09) BS01 dna ? GO:0003677 ... Q5SHY0 37081315
    765579 8ab0:F (6.09) BS02 ZN ? GO:0003677 ... Q5SHY0 37081315
    765580 8ab3:A (2.616) BS01 FBP 1.1.1.27 GO:0000166 ... K9Z684 37797308
    765581 8ab3:A (2.616) BS02 NAI 1.1.1.27 GO:0000166 ... K9Z684 37797308
    765582 8ab3:B (2.616) BS01 FBP 1.1.1.27 GO:0000166 ... K9Z684 37797308
    765583 8ab3:B (2.616) BS02 NAI 1.1.1.27 GO:0000166 ... K9Z684 37797308
    765584 8ab3:C (2.616) BS01 NAI 1.1.1.27 GO:0000166 ... K9Z684 37797308
    765585 8ab3:C (2.616) BS02 FBP 1.1.1.27 GO:0000166 ... K9Z684 37797308
    765586 8ab3:D (2.616) BS01 FBP 1.1.1.27 GO:0000166 ... K9Z684 37797308
    765587 8ab3:D (2.616) BS02 NAI 1.1.1.27 GO:0000166 ... K9Z684 37797308
    765588 8ab4:M (2.22) BS01 GTP ? GO:0000902 ... A0A150MJ77 N/A
    765589 8ab5:A (2.4) BS01 peptide 3.4.21.105 GO:0004252 ... P09391 38901105
    765590 8ab5:B (2.4) BS01 peptide 3.4.21.105 GO:0004252 ... P09391 38901105
    765591 8ab6:C (2.0) BS01 HEM ? GO:0005739 ... Q9B6D0 36598500
    765592 8ab6:C (2.0) BS02 HEM ? GO:0005739 ... Q9B6D0 36598500
    765593 8ab6:D (2.0) BS01 HEC 7.1.1.8 GO:0005739 ... Q6CGP7 36598500
    765594 8ab6:N (2.0) BS01 HEM ? GO:0005739 ... Q9B6D0 36598500
    765595 8ab6:N (2.0) BS02 HEM ? GO:0005739 ... Q9B6D0 36598500
    765596 8ab6:O (2.0) BS01 HEC 7.1.1.8 GO:0005739 ... Q6CGP7 36598500
    765597 8ab7:C (3.3) BS01 HEM ? GO:0005739 ... Q9B6D0 36598500
    765598 8ab7:C (3.3) BS02 HEM ? GO:0005739 ... Q9B6D0 36598500
    765599 8ab7:C (3.3) BS03 AWB ? GO:0005739 ... Q9B6D0 36598500
    765600 8ab7:C (3.3) BS04 AOQ ? GO:0005739 ... Q9B6D0 36598500

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).