SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    765801 8ac9:B (2.351) BS02 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    765802 8ac9:B (2.351) BS03 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    765803 8aca:A (2.54) BS01 CU ? N/A Q9RWM2 36502921
    765804 8aca:B (2.54) BS01 CU ? N/A Q9RWM2 36502921
    765805 8aca:C (2.54) BS01 CU ? N/A Q9RWM2 36502921
    765806 8acb:A (2.6) BS01 rna 3.4.22.44
    3.4.22.45
    GO:0019028 ... A0A0Y0I2B8 37076658
    765807 8acc:A (2.9) BS01 rna ? GO:0019028 ... Q599X9 37076658
    765808 8acd:A (1.39) BS01 LQ6 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 36107752
    765809 8acf:H (1.8) BS01 CA N/A N/A N/A N/A
    765810 8acg:A (2.84) BS01 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    765811 8acg:A (2.84) BS02 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    765812 8acg:A (2.84) BS03 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    765813 8acg:A (2.84) BS04 MG 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    765814 8acg:B (2.84) BS01 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    765815 8acg:B (2.84) BS02 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    765816 8acg:B (2.84) BS03 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    765817 8acg:C (2.84) BS01 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    765818 8acg:C (2.84) BS02 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    765819 8acg:C (2.84) BS03 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    765820 8acg:D (2.84) BS01 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    765821 8acg:D (2.84) BS02 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    765822 8acg:D (2.84) BS03 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    765823 8acg:D (2.84) BS04 MG 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    765824 8acg:E (2.84) BS01 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    765825 8acg:E (2.84) BS02 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    765826 8acg:E (2.84) BS03 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    765827 8acg:F (2.84) BS01 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    765828 8acg:F (2.84) BS02 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    765829 8acg:F (2.84) BS03 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    765830 8acg:F (2.84) BS04 MG 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    765831 8aci:H (1.85) BS01 CA N/A N/A N/A N/A
    765832 8ack:A (1.784) BS01 peptide 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    765833 8ack:A (1.784) BS02 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    765834 8ack:A (1.784) BS03 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    765835 8ack:A (1.784) BS04 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    765836 8ack:A (1.784) BS05 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    765837 8ack:B (1.784) BS01 peptide 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    765838 8ack:B (1.784) BS02 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    765839 8ack:B (1.784) BS03 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    765840 8ack:B (1.784) BS04 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    765841 8acl:A (1.4) BS01 LQL 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 36107752
    765842 8acm:AAA (2.14) BS01 MG 2.7.11.24 GO:0000077 ... P47811 N/A
    765843 8acm:AAA (2.14) BS02 MG 2.7.11.24 GO:0000077 ... P47811 N/A
    765844 8acm:AAA (2.14) BS03 MG 2.7.11.24 GO:0000077 ... P47811 N/A
    765845 8acm:AAA (2.14) BS04 SB2 2.7.11.24 GO:0000077 ... P47811 N/A
    765846 8acn:A (2.0) BS01 SF4 4.2.1.3 GO:0003994 ... P20004 1547214
    765847 8acn:A (2.0) BS02 NIC 4.2.1.3 GO:0003994 ... P20004 1547214
    765848 8aco:AAA (2.65) BS01 SB2 2.7.11.24 GO:0000077 ... P47811 N/A
    765849 8aco:AAA (2.65) BS02 MG 2.7.11.24 GO:0000077 ... P47811 N/A
    765850 8acp:C (4.5) BS01 peptide 2.7.7.6 GO:0000345 ... P0A8V2 36220101
    765851 8acp:C (4.5) BS02 dna 2.7.7.6 GO:0000345 ... P0A8V2 36220101
    765852 8acp:C (4.5) BS03 rna 2.7.7.6 GO:0000345 ... P0A8V2 36220101
    765853 8acp:C (4.5) BS04 dna 2.7.7.6 GO:0000345 ... P0A8V2 36220101
    765854 8acp:D (4.5) BS01 peptide 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    765855 8acp:D (4.5) BS02 rna 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    765856 8acp:D (4.5) BS03 MG 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    765857 8acp:D (4.5) BS04 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    765858 8acp:D (4.5) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    765859 8acq:A (2.54) BS01 JPI ? N/A Q9RRB6 36502921
    765860 8acq:A (2.54) BS02 JQ6 ? N/A Q9RRB6 36502921
    765861 8acq:A (2.54) BS03 JPX ? N/A Q9RRB6 36502921
    765862 8acq:A (2.54) BS04 CU ? N/A Q9RRB6 36502921
    765863 8acq:A (2.54) BS05 CU ? N/A Q9RRB6 36502921
    765864 8acq:A (2.54) BS06 CU ? N/A Q9RRB6 36502921
    765865 8acq:A (2.54) BS07 FE ? N/A Q9RRB6 36502921
    765866 8acq:A (2.54) BS08 JPX ? N/A Q9RRB6 36502921
    765867 8acq:B (2.54) BS01 JPX ? N/A Q9RRB6 36502921
    765868 8acq:B (2.54) BS02 JPI ? N/A Q9RRB6 36502921
    765869 8acq:B (2.54) BS03 JPX ? N/A Q9RRB6 36502921
    765870 8acq:B (2.54) BS04 JQ6 ? N/A Q9RRB6 36502921
    765871 8acq:B (2.54) BS05 CU ? N/A Q9RRB6 36502921
    765872 8acq:B (2.54) BS06 CU ? N/A Q9RRB6 36502921
    765873 8acq:B (2.54) BS07 CU ? N/A Q9RRB6 36502921
    765874 8acq:B (2.54) BS08 FE ? N/A Q9RRB6 36502921
    765875 8acq:C (2.54) BS01 JPX ? N/A Q9RRB6 36502921
    765876 8acq:C (2.54) BS02 JPX ? N/A Q9RRB6 36502921
    765877 8acq:C (2.54) BS03 JPI ? N/A Q9RRB6 36502921
    765878 8acq:C (2.54) BS04 JQ6 ? N/A Q9RRB6 36502921
    765879 8acq:C (2.54) BS05 CU ? N/A Q9RRB6 36502921
    765880 8acq:C (2.54) BS06 CU ? N/A Q9RRB6 36502921
    765881 8acq:C (2.54) BS07 CU ? N/A Q9RRB6 36502921
    765882 8acq:C (2.54) BS08 FE ? N/A Q9RRB6 36502921
    765883 8acq:H (2.54) BS01 CU ? N/A Q9RWM2 36502921
    765884 8acq:I (2.54) BS01 CU ? N/A Q9RWM2 36502921
    765885 8acq:L (2.54) BS01 CU ? N/A Q9RWM2 36502921
    765886 8acr:A (2.1) BS01 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    765887 8acr:A (2.1) BS02 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    765888 8acr:A (2.1) BS03 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    765889 8acs:A (2.5) BS01 FAD ? GO:0000166 ... A0A290WZ30 36970468
    765890 8acs:B (2.5) BS01 FAD ? GO:0000166 ... A0A290WZ30 36970468
    765891 8acs:C (2.5) BS01 FAD ? GO:0000166 ... A0A290WZ30 36970468
    765892 8acs:D (2.5) BS01 FAD ? GO:0000166 ... A0A290WZ30 36970468
    765893 8act:A (3.6) BS01 ADP ? GO:0003774 ... P12883 37258552
    765894 8act:B (3.6) BS01 ADP ? GO:0003774 ... P12883 37258552
    765895 8act:B (3.6) BS02 MG ? GO:0003774 ... P12883 37258552
    765896 8acu:A (2.97) BS01 MN 2.7.6.5 GO:0015969 ... O54408 N/A
    765897 8acu:B (2.97) BS01 MN 2.7.6.5 GO:0015969 ... O54408 N/A
    765898 8acv:A (2.26) BS01 AKG ? GO:0046872 ... A0A075X7C6 N/A
    765899 8acv:A (2.26) BS02 ZN ? GO:0046872 ... A0A075X7C6 N/A
    765900 8acv:B (2.26) BS01 AKG ? GO:0046872 ... A0A075X7C6 N/A
    765901 8acv:B (2.26) BS02 ZN ? GO:0046872 ... A0A075X7C6 N/A
    765902 8acw:B (3.4) BS01 FMN 7.2.1.1 GO:0005886 ... A5F5X0 37710014
    765903 8acw:B (3.4) BS02 RBF 7.2.1.1 GO:0005886 ... A5F5X0 37710014
    765904 8acw:C (3.4) BS01 FMN 7.2.1.1 GO:0005886 ... A5F5Y7 37710014
    765905 8acw:D (3.4) BS01 FES 7.2.1.1 GO:0005886 ... A5F5Y6 37710014
    765906 8acw:E (3.4) BS01 FMN 7.2.1.1 GO:0005886 ... A5F5Y5 37710014
    765907 8acw:E (3.4) BS02 FES 7.2.1.1 GO:0005886 ... A5F5Y5 37710014
    765908 8acw:F (3.4) BS01 FAD 7.2.1.1 GO:0005886 ... A5F5Y4 37710014
    765909 8acw:F (3.4) BS02 FES 7.2.1.1 GO:0005886 ... A5F5Y4 37710014
    765910 8acy:B (3.5) BS01 FMN 7.2.1.1 GO:0005886 ... A5F5X0 37710014
    765911 8acy:B (3.5) BS02 RBF 7.2.1.1 GO:0005886 ... A5F5X0 37710014
    765912 8acy:B (3.5) BS03 NA 7.2.1.1 GO:0005886 ... A5F5X0 37710014
    765913 8acy:C (3.5) BS01 FMN 7.2.1.1 GO:0005886 ... A5F5Y7 37710014
    765914 8acy:D (3.5) BS01 FES 7.2.1.1 GO:0005886 ... A5F5Y6 37710014
    765915 8acy:E (3.5) BS01 FMN 7.2.1.1 GO:0005886 ... A5F5Y5 37710014
    765916 8acy:E (3.5) BS02 FES 7.2.1.1 GO:0005886 ... A5F5Y5 37710014
    765917 8acy:F (3.5) BS01 FAD 7.2.1.1 GO:0005886 ... A5F5Y4 37710014
    765918 8acy:F (3.5) BS02 FES 7.2.1.1 GO:0005886 ... A5F5Y4 37710014
    765919 8ad0:B (3.11) BS01 FMN 7.2.1.1 GO:0005886 ... A5F5X0 N/A
    765920 8ad0:B (3.11) BS02 RBF 7.2.1.1 GO:0005886 ... A5F5X0 N/A
    765921 8ad0:C (3.11) BS01 FMN 7.2.1.1 GO:0005886 ... A5F5Y7 N/A
    765922 8ad0:D (3.11) BS01 FES 7.2.1.1 GO:0005886 ... A5F5Y6 N/A
    765923 8ad0:E (3.11) BS01 FES 7.2.1.1 GO:0005886 ... A5F5Y5 N/A
    765924 8ad0:F (3.11) BS01 FAD 7.2.1.1 GO:0005886 ... A5F5Y4 N/A
    765925 8ad0:F (3.11) BS02 FES 7.2.1.1 GO:0005886 ... A5F5Y4 N/A
    765926 8ad1:C (4.1) BS01 dna 2.7.7.6 GO:0000345 ... P0A8V2 36220101
    765927 8ad1:C (4.1) BS02 rna 2.7.7.6 GO:0000345 ... P0A8V2 36220101
    765928 8ad1:C (4.1) BS03 dna 2.7.7.6 GO:0000345 ... P0A8V2 36220101
    765929 8ad1:D (4.1) BS01 dna 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    765930 8ad1:D (4.1) BS02 rna 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    765931 8ad1:D (4.1) BS03 dna 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    765932 8ad1:D (4.1) BS04 MG 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    765933 8ad1:D (4.1) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    765934 8ad1:D (4.1) BS06 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    765935 8ad1:F (4.1) BS01 dna ? GO:0000345 ... P00579 36220101
    765936 8ad2:A (2.0) BS01 ZN ? GO:0046872 ... Q94EW1 39437181
    765937 8ad2:B (2.0) BS01 ZN ? GO:0046872 ... Q94EW1 39437181
    765938 8ad2:C (2.0) BS01 ZN ? GO:0046872 ... Q94EW1 39437181
    765939 8ad2:D (2.0) BS01 ZN ? GO:0046872 ... Q94EW1 39437181
    765940 8ad2:F (2.0) BS01 ZN ? GO:0046872 ... Q94EW1 39437181
    765941 8ad2:F (2.0) BS02 ZN ? GO:0046872 ... Q94EW1 39437181
    765942 8ad2:G (2.0) BS01 ZN ? GO:0046872 ... Q94EW1 39437181
    765943 8ad3:A (1.55) BS01 FAD 7.2.1.1 GO:0006814 ... A5F5Y4 37710014
    765944 8ad3:A (1.55) BS02 MG 7.2.1.1 GO:0006814 ... A5F5Y4 37710014
    765945 8ad3:B (1.55) BS01 FAD 7.2.1.1 GO:0006814 ... A5F5Y4 37710014
    765946 8ad4:A (1.5) BS01 FAD 7.2.1.1 GO:0006814 ... A5F5Y4 37710014
    765947 8ad4:A (1.5) BS02 NAI 7.2.1.1 GO:0006814 ... A5F5Y4 37710014
    765948 8ad4:A (1.5) BS03 NAI 7.2.1.1 GO:0006814 ... A5F5Y4 37710014
    765949 8ad4:A (1.5) BS04 NA 7.2.1.1 GO:0006814 ... A5F5Y4 37710014
    765950 8ad4:A (1.5) BS05 NA 7.2.1.1 GO:0006814 ... A5F5Y4 37710014
    765951 8ad4:B (1.5) BS01 FAD 7.2.1.1 GO:0006814 ... A5F5Y4 37710014
    765952 8ad4:B (1.5) BS02 NAI 7.2.1.1 GO:0006814 ... A5F5Y4 37710014
    765953 8ad4:B (1.5) BS03 NAI 7.2.1.1 GO:0006814 ... A5F5Y4 37710014
    765954 8ad4:B (1.5) BS04 NAI 7.2.1.1 GO:0006814 ... A5F5Y4 37710014
    765955 8ad4:B (1.5) BS05 NA 7.2.1.1 GO:0006814 ... A5F5Y4 37710014
    765956 8ad4:B (1.5) BS06 NA 7.2.1.1 GO:0006814 ... A5F5Y4 37710014
    765957 8ad5:A (1.65) BS01 FAD 7.2.1.1 GO:0006814 ... A5F5Y4 37710014
    765958 8ad5:A (1.65) BS02 NA 7.2.1.1 GO:0006814 ... A5F5Y4 37710014
    765959 8ad5:A (1.65) BS03 NAI 7.2.1.1 GO:0006814 ... A5F5Y4 37710014
    765960 8ad5:B (1.65) BS01 FAD 7.2.1.1 GO:0006814 ... A5F5Y4 37710014
    765961 8ad5:B (1.65) BS02 NA 7.2.1.1 GO:0006814 ... A5F5Y4 37710014
    765962 8ad5:B (1.65) BS03 NAI 7.2.1.1 GO:0006814 ... A5F5Y4 37710014
    765963 8ad6:A (1.52) BS01 2BA ? N/A O31698 N/A
    765964 8ad6:B (1.52) BS01 2BA ? N/A O31698 N/A
    765965 8ad7:A (2.33) BS01 DTR 1.14.19.59 GO:0000166 ... A1E280 36259362
    765966 8ad8:A (2.95) BS01 LT0 1.14.19.59 GO:0000166 ... A1E280 36259362
    765967 8ad9:A (1.43) BS01 peptide ? N/A P9WPC7 36944713
    765968 8ad9:A (1.43) BS02 peptide ? N/A P9WPC7 36944713
    765969 8ad9:B (1.43) BS01 peptide ? N/A P9WPC7 36944713
    765970 8ad9:B (1.43) BS02 peptide ? N/A P9WPC7 36944713
    765971 8adb:A (1.73) BS01 AYE ? N/A D6YWY5 36496440
    765972 8adf:A (2.13) BS01 LRA ? GO:0003677 ... P37231 37189440
    765973 8adf:B (2.13) BS01 LRA ? GO:0003677 ... P37231 37189440
    765974 8adg:A (3.0) BS01 peptide ? GO:0019867 ... P0A940 36308277
    765975 8adh:A (2.4) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 3771574
    765976 8adh:A (2.4) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 3771574
    765977 8adi:A (3.4) BS01 peptide ? GO:0019867 ... P0A940 36308277
    765978 8adj:A (2.508) BS01 LQX 3.2.1.143 GO:0004649 ... O46043 37268618
    765979 8adj:B (2.508) BS01 LQX 3.2.1.143 GO:0004649 ... O46043 37268618
    765980 8adj:C (2.508) BS01 LQX 3.2.1.143 GO:0004649 ... O46043 37268618
    765981 8adl:A (2.95) BS01 ZN ? GO:0000324 ... Q08281 36289347
    765982 8adl:A (2.95) BS02 ZN ? GO:0000324 ... Q08281 36289347
    765983 8adl:A (2.95) BS03 ZN ? GO:0000324 ... Q08281 36289347
    765984 8adl:B (2.95) BS01 ZN ? GO:0005515 ... P38164 36289347
    765985 8adl:B (2.95) BS02 ZN ? GO:0005515 ... P38164 36289347
    765986 8adl:B (2.95) BS03 ZN ? GO:0005515 ... P38164 36289347
    765987 8adl:B (2.95) BS04 ZN ? GO:0005515 ... P38164 36289347
    765988 8adl:C (2.95) BS01 ZN ? GO:0000329 ... Q03897 36289347
    765989 8adl:C (2.95) BS02 ZN ? GO:0000329 ... Q03897 36289347
    765990 8adl:C (2.95) BS03 ZN ? GO:0000329 ... Q03897 36289347
    765991 8adl:G (2.95) BS01 ZN ? GO:0005515 ... P38164 36289347
    765992 8adl:G (2.95) BS02 ZN ? GO:0005515 ... P38164 36289347
    765993 8adl:G (2.95) BS03 ZN ? GO:0005515 ... P38164 36289347
    765994 8adl:G (2.95) BS04 ZN ? GO:0005515 ... P38164 36289347
    765995 8adl:I (2.95) BS01 ZN ? GO:0000324 ... Q08281 36289347
    765996 8adl:I (2.95) BS02 ZN ? GO:0000324 ... Q08281 36289347
    765997 8adl:I (2.95) BS03 ZN ? GO:0000324 ... Q08281 36289347
    765998 8adl:J (2.95) BS01 ZN ? GO:0005515 ... P38164 36289347
    765999 8adl:J (2.95) BS02 ZN ? GO:0005515 ... P38164 36289347
    766000 8adl:J (2.95) BS03 ZN ? GO:0005515 ... P38164 36289347

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).