SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    766201 8agm:BBB (1.966) BS01 LEO ? GO:0003824 ... A0A1U9WZ52 N/A
    766202 8agm:BBB (1.966) BS02 LEO ? GO:0003824 ... A0A1U9WZ52 N/A
    766203 8agm:CCC (1.966) BS01 LEO ? GO:0003824 ... A0A1U9WZ52 N/A
    766204 8agm:CCC (1.966) BS02 LEO ? GO:0003824 ... A0A1U9WZ52 N/A
    766205 8agm:DDD (1.966) BS01 LEO ? GO:0003824 ... A0A1U9WZ52 N/A
    766206 8agm:DDD (1.966) BS02 LEO ? GO:0003824 ... A0A1U9WZ52 N/A
    766207 8agn:AAA (1.957) BS01 7EX ? GO:0003824 ... A0A1U9WZ52 N/A
    766208 8agn:AAA (1.957) BS02 7EX ? GO:0003824 ... A0A1U9WZ52 N/A
    766209 8agn:BBB (1.957) BS01 7EX ? GO:0003824 ... A0A1U9WZ52 N/A
    766210 8agn:BBB (1.957) BS02 7EX ? GO:0003824 ... A0A1U9WZ52 N/A
    766211 8agn:CCC (1.957) BS01 7EX ? GO:0003824 ... A0A1U9WZ52 N/A
    766212 8agn:CCC (1.957) BS02 7EX ? GO:0003824 ... A0A1U9WZ52 N/A
    766213 8agn:DDD (1.957) BS01 7EX ? GO:0003824 ... A0A1U9WZ52 N/A
    766214 8agn:DDD (1.957) BS02 7EX ? GO:0003824 ... A0A1U9WZ52 N/A
    766215 8agp:AAA (1.49) BS01 M1U ? GO:0003824 ... A0A1U9WZ52 N/A
    766216 8agp:AAA (1.49) BS02 M1U ? GO:0003824 ... A0A1U9WZ52 N/A
    766217 8agp:BBB (1.49) BS01 M1U ? GO:0003824 ... A0A1U9WZ52 N/A
    766218 8agp:BBB (1.49) BS02 M1U ? GO:0003824 ... A0A1U9WZ52 N/A
    766219 8agq:A (1.093) BS01 GSH 2.5.1.18 GO:0004364 ... B9MWW0 37881531
    766220 8agq:A (1.093) BS02 M5O 2.5.1.18 GO:0004364 ... B9MWW0 37881531
    766221 8ags:AAA (1.61) BS01 2CH ? GO:0003824 ... A0A1U9WZ52 N/A
    766222 8ags:BBB (1.61) BS01 2CH ? GO:0003824 ... A0A1U9WZ52 N/A
    766223 8agt:0 (2.6) BS01 rna ? GO:0000027 ... P05317 36804914
    766224 8agt:A (2.6) BS01 rna ? GO:0002181 ... P05748 36804914
    766225 8agt:A (2.6) BS02 rna ? GO:0002181 ... P05748 36804914
    766226 8agt:B (2.6) BS01 rna ? GO:0000470 ... P26784 36804914
    766227 8agt:C (2.6) BS01 rna ? GO:0000448 ... P05740 36804914
    766228 8agt:C (2.6) BS02 rna ? GO:0000448 ... P05740 36804914
    766229 8agt:D (2.6) BS01 rna ? GO:0002181 ... P0CX49 36804914
    766230 8agt:E (2.6) BS01 rna ? GO:0002181 ... P0CX82 36804914
    766231 8agt:F (2.6) BS01 rna ? GO:0002181 ... P0CX23 36804914
    766232 8agt:F (2.6) BS02 rna ? GO:0002181 ... P0CX23 36804914
    766233 8agt:G (2.6) BS01 rna ? GO:0002181 ... Q02753 36804914
    766234 8agt:G (2.6) BS02 rna ? GO:0002181 ... Q02753 36804914
    766235 8agt:H (2.6) BS01 rna ? GO:0002181 ... P05749 36804914
    766236 8agt:I (2.6) BS01 rna ? GO:0002181 ... P0CX41 36804914
    766237 8agt:J (2.6) BS01 rna ? GO:0002181 ... P04449 36804914
    766238 8agt:K (2.6) BS01 rna ? GO:0000027 ... P04456 36804914
    766239 8agt:K (2.6) BS02 rna ? GO:0000027 ... P04456 36804914
    766240 8agt:L (2.6) BS01 rna ? GO:0002181 ... P05743 36804914
    766241 8agt:L (2.6) BS02 rna ? GO:0002181 ... P05743 36804914
    766242 8agt:M (2.6) BS01 rna ? GO:0002181 ... P0C2H6 36804914
    766243 8agt:N (2.6) BS01 rna ? GO:0002181 ... P02406 36804914
    766244 8agt:O (2.6) BS01 rna ? GO:0002181 ... P05747 36804914
    766245 8agt:P (2.6) BS01 rna ? GO:0002181 ... P14120 36804914
    766246 8agt:Q (2.6) BS01 rna ? GO:0002181 ... P0C2H8 36804914
    766247 8agt:R (2.6) BS01 rna ? GO:0002181 ... P38061 36804914
    766248 8agt:R (2.6) BS02 MG ? GO:0002181 ... P38061 36804914
    766249 8agt:S (2.6) BS01 rna ? GO:0000027 ... P05744 36804914
    766250 8agt:T (2.6) BS01 rna ? GO:0002181 ... P87262 36804914
    766251 8agt:T (2.6) BS02 ZN ? GO:0002181 ... P87262 36804914
    766252 8agt:U (2.6) BS01 rna ? GO:0000463 ... P0CX84 36804914
    766253 8agt:U (2.6) BS02 rna ? GO:0000463 ... P0CX84 36804914
    766254 8agt:V (2.6) BS01 rna ? GO:0002181 ... P05745 36804914
    766255 8agt:W (2.6) BS01 rna ? GO:0000448 ... P49166 36804914
    766256 8agt:W (2.6) BS02 rna ? GO:0000448 ... P49166 36804914
    766257 8agt:W (2.6) BS03 ZN ? GO:0000448 ... P49166 36804914
    766258 8agt:X (2.6) BS01 rna ? GO:0002181 ... P49167 36804914
    766259 8agt:Y (2.6) BS01 rna ? GO:0002181 ... P04650 36804914
    766260 8agt:Y (2.6) BS02 rna ? GO:0002181 ... P04650 36804914
    766261 8agt:Z (2.6) BS01 rna ? GO:0000027 ... P0CH08 36804914
    766262 8agt:Z (2.6) BS02 ZN ? GO:0000027 ... P0CH08 36804914
    766263 8agt:a (2.6) BS01 rna ? GO:0000049 ... Q12532 36804914
    766264 8agt:a (2.6) BS02 rna ? GO:0000049 ... Q12532 36804914
    766265 8agt:a (2.6) BS03 rna ? GO:0000049 ... Q12532 36804914
    766266 8agt:b (2.6) BS01 rna ? GO:0002181 ... P0CX27 36804914
    766267 8agt:b (2.6) BS02 ZN ? GO:0002181 ... P0CX27 36804914
    766268 8agt:c (2.6) BS01 rna ? GO:0002181 ... P0CX25 36804914
    766269 8agt:c (2.6) BS02 ZN ? GO:0002181 ... P0CX25 36804914
    766270 8agt:e (2.6) BS01 rna 2.3.2.27 GO:0000781 ... Q04781 36804914
    766271 8agt:e (2.6) BS02 ZN 2.3.2.27 GO:0000781 ... Q04781 36804914
    766272 8agt:e (2.6) BS03 ZN 2.3.2.27 GO:0000781 ... Q04781 36804914
    766273 8agt:g (2.6) BS01 rna ? GO:0000054 ... Q12522 36804914
    766274 8agt:j (2.6) BS01 rna ? GO:0002181 ... P0CX45 36804914
    766275 8agt:j (2.6) BS02 MG ? GO:0002181 ... P0CX45 36804914
    766276 8agt:k (2.6) BS01 rna ? GO:0000027 ... P14126 36804914
    766277 8agt:k (2.6) BS02 MG ? GO:0000027 ... P14126 36804914
    766278 8agt:l (2.6) BS01 rna ? GO:0002181 ... P10664 36804914
    766279 8agt:l (2.6) BS02 rna ? GO:0002181 ... P10664 36804914
    766280 8agt:m (2.6) BS01 rna ? GO:0000027 ... P26321 36804914
    766281 8agt:m (2.6) BS02 rna ? GO:0000027 ... P26321 36804914
    766282 8agt:n (2.6) BS01 rna ? GO:0000027 ... P05739 36804914
    766283 8agt:o (2.6) BS01 rna ? GO:0000463 ... P05737 36804914
    766284 8agt:o (2.6) BS02 rna ? GO:0000463 ... P05737 36804914
    766285 8agt:p (2.6) BS01 rna ? GO:0000470 ... P17076 36804914
    766286 8agt:p (2.6) BS02 rna ? GO:0000470 ... P17076 36804914
    766287 8agt:q (2.6) BS01 rna ? GO:0002181 ... P05738 36804914
    766288 8agt:r (2.6) BS01 rna ? GO:0000027 ... P41805 36804914
    766289 8agt:r (2.6) BS02 rna ? GO:0000027 ... P41805 36804914
    766290 8agt:r (2.6) BS03 rna ? GO:0000027 ... P41805 36804914
    766291 8agt:r (2.6) BS04 rna ? GO:0000027 ... P41805 36804914
    766292 8agt:s (2.6) BS01 rna ? GO:0000027 ... P0C0W9 36804914
    766293 8agt:s (2.6) BS02 rna ? GO:0000027 ... P0C0W9 36804914
    766294 8agt:t (2.6) BS01 rna ? GO:0002181 ... Q12690 36804914
    766295 8agt:t (2.6) BS02 rna ? GO:0002181 ... Q12690 36804914
    766296 8agt:u (2.6) BS01 rna ? GO:0000027 ... P36105 36804914
    766297 8agt:v (2.6) BS01 rna ? GO:0002182 ... P23301 36804914
    766298 8agt:w (2.6) BS01 rna ? GO:0000055 ... P0CX43 36804914
    766299 8agt:z (2.6) BS01 rna ? GO:0000027 ... P0CX53 36804914
    766300 8agu:0 (2.7) BS01 rna ? GO:0000027 ... P05317 36804914
    766301 8agu:A (2.7) BS01 rna ? GO:0002181 ... P05748 36804914
    766302 8agu:A (2.7) BS02 rna ? GO:0002181 ... P05748 36804914
    766303 8agu:B (2.7) BS01 rna ? GO:0000470 ... P26784 36804914
    766304 8agu:C (2.7) BS01 rna ? GO:0000448 ... P05740 36804914
    766305 8agu:C (2.7) BS02 rna ? GO:0000448 ... P05740 36804914
    766306 8agu:D (2.7) BS01 rna ? GO:0002181 ... P0CX49 36804914
    766307 8agu:E (2.7) BS01 rna ? GO:0002181 ... P0CX82 36804914
    766308 8agu:F (2.7) BS01 rna ? GO:0002181 ... P0CX23 36804914
    766309 8agu:F (2.7) BS02 rna ? GO:0002181 ... P0CX23 36804914
    766310 8agu:G (2.7) BS01 rna ? GO:0002181 ... Q02753 36804914
    766311 8agu:G (2.7) BS02 rna ? GO:0002181 ... Q02753 36804914
    766312 8agu:H (2.7) BS01 rna ? GO:0002181 ... P05749 36804914
    766313 8agu:I (2.7) BS01 rna ? GO:0002181 ... P0CX41 36804914
    766314 8agu:J (2.7) BS01 rna ? GO:0002181 ... P04449 36804914
    766315 8agu:K (2.7) BS01 rna ? GO:0000027 ... P04456 36804914
    766316 8agu:K (2.7) BS02 rna ? GO:0000027 ... P04456 36804914
    766317 8agu:L (2.7) BS01 rna ? GO:0002181 ... P05743 36804914
    766318 8agu:L (2.7) BS02 rna ? GO:0002181 ... P05743 36804914
    766319 8agu:M (2.7) BS01 rna ? GO:0002181 ... P0C2H6 36804914
    766320 8agu:N (2.7) BS01 rna ? GO:0002181 ... P02406 36804914
    766321 8agu:O (2.7) BS01 rna ? GO:0002181 ... P05747 36804914
    766322 8agu:P (2.7) BS01 rna ? GO:0002181 ... P14120 36804914
    766323 8agu:Q (2.7) BS01 rna ? GO:0002181 ... P0C2H8 36804914
    766324 8agu:R (2.7) BS01 rna ? GO:0002181 ... P38061 36804914
    766325 8agu:R (2.7) BS02 MG ? GO:0002181 ... P38061 36804914
    766326 8agu:S (2.7) BS01 rna ? GO:0000027 ... P05744 36804914
    766327 8agu:T (2.7) BS01 rna ? GO:0002181 ... P87262 36804914
    766328 8agu:T (2.7) BS02 ZN ? GO:0002181 ... P87262 36804914
    766329 8agu:U (2.7) BS01 rna ? GO:0000463 ... P0CX84 36804914
    766330 8agu:U (2.7) BS02 rna ? GO:0000463 ... P0CX84 36804914
    766331 8agu:V (2.7) BS01 rna ? GO:0002181 ... P05745 36804914
    766332 8agu:W (2.7) BS01 rna ? GO:0000448 ... P49166 36804914
    766333 8agu:W (2.7) BS02 rna ? GO:0000448 ... P49166 36804914
    766334 8agu:W (2.7) BS03 ZN ? GO:0000448 ... P49166 36804914
    766335 8agu:X (2.7) BS01 rna ? GO:0002181 ... P49167 36804914
    766336 8agu:Y (2.7) BS01 rna ? GO:0002181 ... P04650 36804914
    766337 8agu:Y (2.7) BS02 rna ? GO:0002181 ... P04650 36804914
    766338 8agu:Z (2.7) BS01 rna ? GO:0000027 ... P0CH08 36804914
    766339 8agu:Z (2.7) BS02 ZN ? GO:0000027 ... P0CH08 36804914
    766340 8agu:a (2.7) BS01 rna ? GO:0000049 ... Q12532 36804914
    766341 8agu:a (2.7) BS02 rna ? GO:0000049 ... Q12532 36804914
    766342 8agu:b (2.7) BS01 rna ? GO:0002181 ... P0CX27 36804914
    766343 8agu:b (2.7) BS02 ZN ? GO:0002181 ... P0CX27 36804914
    766344 8agu:c (2.7) BS01 rna ? GO:0002181 ... P0CX25 36804914
    766345 8agu:c (2.7) BS02 ZN ? GO:0002181 ... P0CX25 36804914
    766346 8agu:e (2.7) BS01 rna 2.3.2.27 GO:0000781 ... Q04781 36804914
    766347 8agu:e (2.7) BS02 ZN 2.3.2.27 GO:0000781 ... Q04781 36804914
    766348 8agu:e (2.7) BS03 ZN 2.3.2.27 GO:0000781 ... Q04781 36804914
    766349 8agu:g (2.7) BS01 rna ? GO:0000054 ... Q12522 36804914
    766350 8agu:j (2.7) BS01 rna ? GO:0002181 ... P0CX45 36804914
    766351 8agu:j (2.7) BS02 MG ? GO:0002181 ... P0CX45 36804914
    766352 8agu:k (2.7) BS01 rna ? GO:0000027 ... P14126 36804914
    766353 8agu:k (2.7) BS02 MG ? GO:0000027 ... P14126 36804914
    766354 8agu:l (2.7) BS01 rna ? GO:0002181 ... P10664 36804914
    766355 8agu:l (2.7) BS02 rna ? GO:0002181 ... P10664 36804914
    766356 8agu:l (2.7) BS03 peptide ? GO:0002181 ... P10664 36804914
    766357 8agu:m (2.7) BS01 rna ? GO:0000027 ... P26321 36804914
    766358 8agu:m (2.7) BS02 rna ? GO:0000027 ... P26321 36804914
    766359 8agu:n (2.7) BS01 rna ? GO:0000027 ... P05739 36804914
    766360 8agu:o (2.7) BS01 rna ? GO:0000463 ... P05737 36804914
    766361 8agu:o (2.7) BS02 rna ? GO:0000463 ... P05737 36804914
    766362 8agu:p (2.7) BS01 rna ? GO:0000470 ... P17076 36804914
    766363 8agu:p (2.7) BS02 rna ? GO:0000470 ... P17076 36804914
    766364 8agu:q (2.7) BS01 rna ? GO:0002181 ... P05738 36804914
    766365 8agu:r (2.7) BS01 rna ? GO:0000027 ... P41805 36804914
    766366 8agu:r (2.7) BS02 rna ? GO:0000027 ... P41805 36804914
    766367 8agu:s (2.7) BS01 rna ? GO:0000027 ... P0C0W9 36804914
    766368 8agu:s (2.7) BS02 rna ? GO:0000027 ... P0C0W9 36804914
    766369 8agu:s (2.7) BS03 rna ? GO:0000027 ... P0C0W9 36804914
    766370 8agu:t (2.7) BS01 rna ? GO:0002181 ... Q12690 36804914
    766371 8agu:t (2.7) BS02 rna ? GO:0002181 ... Q12690 36804914
    766372 8agu:u (2.7) BS01 rna ? GO:0000027 ... P36105 36804914
    766373 8agu:v (2.7) BS01 rna ? GO:0002182 ... P23301 36804914
    766374 8agu:w (2.7) BS01 rna ? GO:0000055 ... P0CX43 36804914
    766375 8agu:z (2.7) BS01 rna ? GO:0000027 ... P0CX54 36804914
    766376 8agv:0 (2.6) BS01 rna ? GO:0000027 ... P05317 36804914
    766377 8agv:A (2.6) BS01 rna ? GO:0002181 ... P05748 36804914
    766378 8agv:A (2.6) BS02 rna ? GO:0002181 ... P05748 36804914
    766379 8agv:B (2.6) BS01 rna ? GO:0000470 ... P26784 36804914
    766380 8agv:C (2.6) BS01 rna ? GO:0000448 ... P05740 36804914
    766381 8agv:C (2.6) BS02 rna ? GO:0000448 ... P05740 36804914
    766382 8agv:D (2.6) BS01 rna ? GO:0002181 ... P0CX49 36804914
    766383 8agv:E (2.6) BS01 rna ? GO:0002181 ... P0CX82 36804914
    766384 8agv:F (2.6) BS01 rna ? GO:0002181 ... P0CX23 36804914
    766385 8agv:F (2.6) BS02 rna ? GO:0002181 ... P0CX23 36804914
    766386 8agv:G (2.6) BS01 rna ? GO:0002181 ... Q02753 36804914
    766387 8agv:G (2.6) BS02 rna ? GO:0002181 ... Q02753 36804914
    766388 8agv:H (2.6) BS01 rna ? GO:0002181 ... P05749 36804914
    766389 8agv:I (2.6) BS01 rna ? GO:0002181 ... P0CX41 36804914
    766390 8agv:J (2.6) BS01 rna ? GO:0002181 ... P04449 36804914
    766391 8agv:K (2.6) BS01 rna ? GO:0000027 ... P04456 36804914
    766392 8agv:K (2.6) BS02 rna ? GO:0000027 ... P04456 36804914
    766393 8agv:L (2.6) BS01 rna ? GO:0002181 ... P05743 36804914
    766394 8agv:L (2.6) BS02 rna ? GO:0002181 ... P05743 36804914
    766395 8agv:M (2.6) BS01 rna ? GO:0002181 ... P0C2H6 36804914
    766396 8agv:N (2.6) BS01 rna ? GO:0002181 ... P02406 36804914
    766397 8agv:O (2.6) BS01 rna ? GO:0002181 ... P05747 36804914
    766398 8agv:P (2.6) BS01 rna ? GO:0002181 ... P14120 36804914
    766399 8agv:Q (2.6) BS01 rna ? GO:0002181 ... P0C2H8 36804914
    766400 8agv:R (2.6) BS01 rna ? GO:0002181 ... P38061 36804914

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).