SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    766401 8agv:R (2.6) BS02 MG ? GO:0002181 ... P38061 36804914
    766402 8agv:S (2.6) BS01 rna ? GO:0000027 ... P05744 36804914
    766403 8agv:T (2.6) BS01 rna ? GO:0002181 ... P87262 36804914
    766404 8agv:T (2.6) BS02 ZN ? GO:0002181 ... P87262 36804914
    766405 8agv:U (2.6) BS01 rna ? GO:0000463 ... P0CX84 36804914
    766406 8agv:U (2.6) BS02 rna ? GO:0000463 ... P0CX84 36804914
    766407 8agv:V (2.6) BS01 rna ? GO:0002181 ... P05745 36804914
    766408 8agv:W (2.6) BS01 rna ? GO:0000448 ... P49166 36804914
    766409 8agv:W (2.6) BS02 rna ? GO:0000448 ... P49166 36804914
    766410 8agv:W (2.6) BS03 ZN ? GO:0000448 ... P49166 36804914
    766411 8agv:X (2.6) BS01 rna ? GO:0002181 ... P49167 36804914
    766412 8agv:Y (2.6) BS01 rna ? GO:0002181 ... P04650 36804914
    766413 8agv:Y (2.6) BS02 rna ? GO:0002181 ... P04650 36804914
    766414 8agv:Z (2.6) BS01 rna ? GO:0000027 ... P0CH08 36804914
    766415 8agv:Z (2.6) BS02 ZN ? GO:0000027 ... P0CH08 36804914
    766416 8agv:a (2.6) BS01 rna ? GO:0000049 ... Q12532 36804914
    766417 8agv:a (2.6) BS02 rna ? GO:0000049 ... Q12532 36804914
    766418 8agv:a (2.6) BS03 rna ? GO:0000049 ... Q12532 36804914
    766419 8agv:b (2.6) BS01 rna ? GO:0002181 ... P0CX27 36804914
    766420 8agv:b (2.6) BS02 ZN ? GO:0002181 ... P0CX27 36804914
    766421 8agv:c (2.6) BS01 rna ? GO:0002181 ... P0CX25 36804914
    766422 8agv:c (2.6) BS02 ZN ? GO:0002181 ... P0CX25 36804914
    766423 8agv:e (2.6) BS01 rna 2.3.2.27 GO:0000781 ... Q04781 36804914
    766424 8agv:e (2.6) BS02 ZN 2.3.2.27 GO:0000781 ... Q04781 36804914
    766425 8agv:e (2.6) BS03 ZN 2.3.2.27 GO:0000781 ... Q04781 36804914
    766426 8agv:g (2.6) BS01 rna ? GO:0000054 ... Q12522 36804914
    766427 8agv:j (2.6) BS01 rna ? GO:0002181 ... P0CX45 36804914
    766428 8agv:j (2.6) BS02 MG ? GO:0002181 ... P0CX45 36804914
    766429 8agv:k (2.6) BS01 rna ? GO:0000027 ... P14126 36804914
    766430 8agv:k (2.6) BS02 MG ? GO:0000027 ... P14126 36804914
    766431 8agv:l (2.6) BS01 rna ? GO:0002181 ... P10664 36804914
    766432 8agv:l (2.6) BS02 rna ? GO:0002181 ... P10664 36804914
    766433 8agv:l (2.6) BS03 peptide ? GO:0002181 ... P10664 36804914
    766434 8agv:m (2.6) BS01 rna ? GO:0000027 ... P26321 36804914
    766435 8agv:m (2.6) BS02 rna ? GO:0000027 ... P26321 36804914
    766436 8agv:n (2.6) BS01 rna ? GO:0000027 ... P05739 36804914
    766437 8agv:o (2.6) BS01 rna ? GO:0000463 ... P05737 36804914
    766438 8agv:o (2.6) BS02 rna ? GO:0000463 ... P05737 36804914
    766439 8agv:p (2.6) BS01 rna ? GO:0000470 ... P17076 36804914
    766440 8agv:p (2.6) BS02 rna ? GO:0000470 ... P17076 36804914
    766441 8agv:q (2.6) BS01 rna ? GO:0002181 ... P05738 36804914
    766442 8agv:r (2.6) BS01 rna ? GO:0000027 ... P41805 36804914
    766443 8agv:r (2.6) BS02 rna ? GO:0000027 ... P41805 36804914
    766444 8agv:s (2.6) BS01 rna ? GO:0000027 ... P0C0W9 36804914
    766445 8agv:s (2.6) BS02 rna ? GO:0000027 ... P0C0W9 36804914
    766446 8agv:s (2.6) BS03 rna ? GO:0000027 ... P0C0W9 36804914
    766447 8agv:t (2.6) BS01 rna ? GO:0002181 ... Q12690 36804914
    766448 8agv:t (2.6) BS02 rna ? GO:0002181 ... Q12690 36804914
    766449 8agv:u (2.6) BS01 rna ? GO:0000027 ... P36105 36804914
    766450 8agv:v (2.6) BS01 rna ? GO:0002182 ... P23301 36804914
    766451 8agv:w (2.6) BS01 rna ? GO:0000055 ... P0CX43 36804914
    766452 8agv:z (2.6) BS01 rna ? GO:0000027 ... P0CX54 36804914
    766453 8agw:0 (2.6) BS01 rna ? GO:0000027 ... P05317 36804914
    766454 8agw:A (2.6) BS01 rna ? GO:0002181 ... P05748 36804914
    766455 8agw:A (2.6) BS02 rna ? GO:0002181 ... P05748 36804914
    766456 8agw:B (2.6) BS01 rna ? GO:0000470 ... P26784 36804914
    766457 8agw:C (2.6) BS01 rna ? GO:0000448 ... P05740 36804914
    766458 8agw:C (2.6) BS02 rna ? GO:0000448 ... P05740 36804914
    766459 8agw:D (2.6) BS01 rna ? GO:0002181 ... P0CX49 36804914
    766460 8agw:E (2.6) BS01 rna ? GO:0002181 ... P0CX82 36804914
    766461 8agw:F (2.6) BS01 rna ? GO:0002181 ... P0CX23 36804914
    766462 8agw:F (2.6) BS02 rna ? GO:0002181 ... P0CX23 36804914
    766463 8agw:G (2.6) BS01 rna ? GO:0002181 ... Q02753 36804914
    766464 8agw:G (2.6) BS02 rna ? GO:0002181 ... Q02753 36804914
    766465 8agw:H (2.6) BS01 rna ? GO:0002181 ... P05749 36804914
    766466 8agw:I (2.6) BS01 rna ? GO:0002181 ... P0CX41 36804914
    766467 8agw:J (2.6) BS01 rna ? GO:0002181 ... P04449 36804914
    766468 8agw:K (2.6) BS01 rna ? GO:0000027 ... P04456 36804914
    766469 8agw:K (2.6) BS02 rna ? GO:0000027 ... P04456 36804914
    766470 8agw:L (2.6) BS01 rna ? GO:0002181 ... P05743 36804914
    766471 8agw:L (2.6) BS02 rna ? GO:0002181 ... P05743 36804914
    766472 8agw:M (2.6) BS01 rna ? GO:0002181 ... P0C2H6 36804914
    766473 8agw:N (2.6) BS01 rna ? GO:0002181 ... P02406 36804914
    766474 8agw:O (2.6) BS01 rna ? GO:0002181 ... P05747 36804914
    766475 8agw:P (2.6) BS01 rna ? GO:0002181 ... P14120 36804914
    766476 8agw:Q (2.6) BS01 rna ? GO:0002181 ... P0C2H8 36804914
    766477 8agw:R (2.6) BS01 rna ? GO:0002181 ... P38061 36804914
    766478 8agw:R (2.6) BS02 MG ? GO:0002181 ... P38061 36804914
    766479 8agw:S (2.6) BS01 rna ? GO:0000027 ... P05744 36804914
    766480 8agw:T (2.6) BS01 rna ? GO:0002181 ... P87262 36804914
    766481 8agw:T (2.6) BS02 ZN ? GO:0002181 ... P87262 36804914
    766482 8agw:U (2.6) BS01 rna ? GO:0000463 ... P0CX84 36804914
    766483 8agw:U (2.6) BS02 rna ? GO:0000463 ... P0CX84 36804914
    766484 8agw:V (2.6) BS01 rna ? GO:0002181 ... P05745 36804914
    766485 8agw:W (2.6) BS01 rna ? GO:0000448 ... P49166 36804914
    766486 8agw:W (2.6) BS02 rna ? GO:0000448 ... P49166 36804914
    766487 8agw:W (2.6) BS03 ZN ? GO:0000448 ... P49166 36804914
    766488 8agw:X (2.6) BS01 rna ? GO:0002181 ... P49167 36804914
    766489 8agw:Y (2.6) BS01 rna ? GO:0002181 ... P04650 36804914
    766490 8agw:Y (2.6) BS02 rna ? GO:0002181 ... P04650 36804914
    766491 8agw:Z (2.6) BS01 rna ? GO:0000027 ... P0CH08 36804914
    766492 8agw:Z (2.6) BS02 ZN ? GO:0000027 ... P0CH08 36804914
    766493 8agw:a (2.6) BS01 rna ? GO:0000049 ... Q12532 36804914
    766494 8agw:a (2.6) BS02 rna ? GO:0000049 ... Q12532 36804914
    766495 8agw:a (2.6) BS03 rna ? GO:0000049 ... Q12532 36804914
    766496 8agw:b (2.6) BS01 rna ? GO:0002181 ... P0CX27 36804914
    766497 8agw:b (2.6) BS02 ZN ? GO:0002181 ... P0CX27 36804914
    766498 8agw:c (2.6) BS01 rna ? GO:0002181 ... P0CX25 36804914
    766499 8agw:c (2.6) BS02 ZN ? GO:0002181 ... P0CX25 36804914
    766500 8agw:e (2.6) BS01 rna 2.3.2.27 GO:0000781 ... Q04781 36804914
    766501 8agw:e (2.6) BS02 ZN 2.3.2.27 GO:0000781 ... Q04781 36804914
    766502 8agw:e (2.6) BS03 ZN 2.3.2.27 GO:0000781 ... Q04781 36804914
    766503 8agw:g (2.6) BS01 rna ? GO:0000054 ... Q12522 36804914
    766504 8agw:j (2.6) BS01 rna ? GO:0002181 ... P0CX45 36804914
    766505 8agw:j (2.6) BS02 MG ? GO:0002181 ... P0CX45 36804914
    766506 8agw:k (2.6) BS01 rna ? GO:0000027 ... P14126 36804914
    766507 8agw:k (2.6) BS02 MG ? GO:0000027 ... P14126 36804914
    766508 8agw:l (2.6) BS01 rna ? GO:0002181 ... P10664 36804914
    766509 8agw:l (2.6) BS02 rna ? GO:0002181 ... P10664 36804914
    766510 8agw:l (2.6) BS03 peptide ? GO:0002181 ... P10664 36804914
    766511 8agw:m (2.6) BS01 rna ? GO:0000027 ... P26321 36804914
    766512 8agw:m (2.6) BS02 rna ? GO:0000027 ... P26321 36804914
    766513 8agw:n (2.6) BS01 rna ? GO:0000027 ... P05739 36804914
    766514 8agw:o (2.6) BS01 rna ? GO:0000463 ... P05737 36804914
    766515 8agw:o (2.6) BS02 rna ? GO:0000463 ... P05737 36804914
    766516 8agw:p (2.6) BS01 rna ? GO:0000470 ... P17076 36804914
    766517 8agw:p (2.6) BS02 rna ? GO:0000470 ... P17076 36804914
    766518 8agw:q (2.6) BS01 rna ? GO:0002181 ... P05738 36804914
    766519 8agw:r (2.6) BS01 rna ? GO:0000027 ... P41805 36804914
    766520 8agw:r (2.6) BS02 rna ? GO:0000027 ... P41805 36804914
    766521 8agw:r (2.6) BS03 rna ? GO:0000027 ... P41805 36804914
    766522 8agw:s (2.6) BS01 rna ? GO:0000027 ... P0C0W9 36804914
    766523 8agw:s (2.6) BS02 rna ? GO:0000027 ... P0C0W9 36804914
    766524 8agw:s (2.6) BS03 rna ? GO:0000027 ... P0C0W9 36804914
    766525 8agw:t (2.6) BS01 rna ? GO:0002181 ... Q12690 36804914
    766526 8agw:t (2.6) BS02 rna ? GO:0002181 ... Q12690 36804914
    766527 8agw:u (2.6) BS01 rna ? GO:0000027 ... P36105 36804914
    766528 8agw:w (2.6) BS01 rna ? GO:0000055 ... P0CX43 36804914
    766529 8agw:z (2.6) BS01 rna ? GO:0000027 ... P0CX53 36804914
    766530 8agx:0 (2.4) BS01 rna ? GO:0000027 ... P05317 36804914
    766531 8agx:A (2.4) BS01 rna ? GO:0002181 ... P05748 36804914
    766532 8agx:A (2.4) BS02 rna ? GO:0002181 ... P05748 36804914
    766533 8agx:B (2.4) BS01 rna ? GO:0000470 ... P26784 36804914
    766534 8agx:C (2.4) BS01 rna ? GO:0000448 ... P05740 36804914
    766535 8agx:C (2.4) BS02 rna ? GO:0000448 ... P05740 36804914
    766536 8agx:D (2.4) BS01 rna ? GO:0002181 ... P0CX49 36804914
    766537 8agx:E (2.4) BS01 rna ? GO:0002181 ... P0CX82 36804914
    766538 8agx:F (2.4) BS01 rna ? GO:0002181 ... P0CX23 36804914
    766539 8agx:F (2.4) BS02 rna ? GO:0002181 ... P0CX23 36804914
    766540 8agx:G (2.4) BS01 rna ? GO:0002181 ... Q02753 36804914
    766541 8agx:G (2.4) BS02 rna ? GO:0002181 ... Q02753 36804914
    766542 8agx:H (2.4) BS01 rna ? GO:0002181 ... P05749 36804914
    766543 8agx:I (2.4) BS01 rna ? GO:0002181 ... P0CX41 36804914
    766544 8agx:J (2.4) BS01 rna ? GO:0002181 ... P04449 36804914
    766545 8agx:K (2.4) BS01 rna ? GO:0000027 ... P04456 36804914
    766546 8agx:K (2.4) BS02 rna ? GO:0000027 ... P04456 36804914
    766547 8agx:L (2.4) BS01 rna ? GO:0002181 ... P05743 36804914
    766548 8agx:L (2.4) BS02 rna ? GO:0002181 ... P05743 36804914
    766549 8agx:M (2.4) BS01 rna ? GO:0002181 ... P0C2H6 36804914
    766550 8agx:N (2.4) BS01 rna ? GO:0002181 ... P02406 36804914
    766551 8agx:O (2.4) BS01 rna ? GO:0002181 ... P05747 36804914
    766552 8agx:P (2.4) BS01 rna ? GO:0002181 ... P14120 36804914
    766553 8agx:Q (2.4) BS01 rna ? GO:0002181 ... P0C2H8 36804914
    766554 8agx:R (2.4) BS01 rna ? GO:0002181 ... P38061 36804914
    766555 8agx:R (2.4) BS02 MG ? GO:0002181 ... P38061 36804914
    766556 8agx:S (2.4) BS01 rna ? GO:0000027 ... P05744 36804914
    766557 8agx:T (2.4) BS01 rna ? GO:0002181 ... P87262 36804914
    766558 8agx:T (2.4) BS02 ZN ? GO:0002181 ... P87262 36804914
    766559 8agx:U (2.4) BS01 rna ? GO:0000463 ... P0CX84 36804914
    766560 8agx:U (2.4) BS02 rna ? GO:0000463 ... P0CX84 36804914
    766561 8agx:V (2.4) BS01 rna ? GO:0002181 ... P05745 36804914
    766562 8agx:W (2.4) BS01 rna ? GO:0000448 ... P49166 36804914
    766563 8agx:W (2.4) BS02 rna ? GO:0000448 ... P49166 36804914
    766564 8agx:W (2.4) BS03 ZN ? GO:0000448 ... P49166 36804914
    766565 8agx:X (2.4) BS01 rna ? GO:0002181 ... P49167 36804914
    766566 8agx:Y (2.4) BS01 rna ? GO:0002181 ... P04650 36804914
    766567 8agx:Y (2.4) BS02 rna ? GO:0002181 ... P04650 36804914
    766568 8agx:Z (2.4) BS01 rna ? GO:0000027 ... P0CH08 36804914
    766569 8agx:Z (2.4) BS02 ZN ? GO:0000027 ... P0CH08 36804914
    766570 8agx:a (2.4) BS01 rna ? GO:0000049 ... Q12532 36804914
    766571 8agx:a (2.4) BS02 rna ? GO:0000049 ... Q12532 36804914
    766572 8agx:a (2.4) BS03 rna ? GO:0000049 ... Q12532 36804914
    766573 8agx:b (2.4) BS01 rna ? GO:0002181 ... P0CX27 36804914
    766574 8agx:b (2.4) BS02 ZN ? GO:0002181 ... P0CX27 36804914
    766575 8agx:c (2.4) BS01 rna ? GO:0002181 ... P0CX25 36804914
    766576 8agx:c (2.4) BS02 ZN ? GO:0002181 ... P0CX25 36804914
    766577 8agx:e (2.4) BS01 rna 2.3.2.27 GO:0000781 ... Q04781 36804914
    766578 8agx:e (2.4) BS02 ZN 2.3.2.27 GO:0000781 ... Q04781 36804914
    766579 8agx:e (2.4) BS03 ZN 2.3.2.27 GO:0000781 ... Q04781 36804914
    766580 8agx:j (2.4) BS01 rna ? GO:0002181 ... P0CX45 36804914
    766581 8agx:j (2.4) BS02 MG ? GO:0002181 ... P0CX45 36804914
    766582 8agx:k (2.4) BS01 rna ? GO:0000027 ... P14126 36804914
    766583 8agx:k (2.4) BS02 MG ? GO:0000027 ... P14126 36804914
    766584 8agx:l (2.4) BS01 rna ? GO:0002181 ... P10664 36804914
    766585 8agx:l (2.4) BS02 rna ? GO:0002181 ... P10664 36804914
    766586 8agx:l (2.4) BS03 peptide ? GO:0002181 ... P10664 36804914
    766587 8agx:m (2.4) BS01 rna ? GO:0000027 ... P26321 36804914
    766588 8agx:m (2.4) BS02 rna ? GO:0000027 ... P26321 36804914
    766589 8agx:n (2.4) BS01 rna ? GO:0000027 ... P05739 36804914
    766590 8agx:o (2.4) BS01 rna ? GO:0000463 ... P05737 36804914
    766591 8agx:o (2.4) BS02 rna ? GO:0000463 ... P05737 36804914
    766592 8agx:p (2.4) BS01 rna ? GO:0000470 ... P17076 36804914
    766593 8agx:p (2.4) BS02 rna ? GO:0000470 ... P17076 36804914
    766594 8agx:q (2.4) BS01 rna ? GO:0002181 ... P05738 36804914
    766595 8agx:r (2.4) BS01 rna ? GO:0000027 ... P41805 36804914
    766596 8agx:r (2.4) BS02 rna ? GO:0000027 ... P41805 36804914
    766597 8agx:r (2.4) BS03 rna ? GO:0000027 ... P41805 36804914
    766598 8agx:s (2.4) BS01 rna ? GO:0000027 ... P0C0W9 36804914
    766599 8agx:s (2.4) BS02 rna ? GO:0000027 ... P0C0W9 36804914
    766600 8agx:s (2.4) BS03 rna ? GO:0000027 ... P0C0W9 36804914

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).