SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    766401 7zsb:A (6.6) BS03 MG 2.7.7.6 GO:0001172 ... P04050 36411341
    766402 7zsb:B (6.6) BS01 ZN 2.7.7.6 GO:0001172 ... P08518 36411341
    766403 7zsb:C (6.6) BS01 ZN ? GO:0000428 ... P16370 36411341
    766404 7zsb:I (6.6) BS01 ZN ? GO:0001172 ... P27999 36411341
    766405 7zsb:I (6.6) BS02 ZN ? GO:0001172 ... P27999 36411341
    766406 7zsb:J (6.6) BS01 ZN ? GO:0001172 ... P22139 36411341
    766407 7zsb:L (6.6) BS01 ZN ? GO:0001172 ... P40422 36411341
    766408 7zsb:M (6.6) BS01 dna ? GO:0000993 ... P29055 36411341
    766409 7zsb:M (6.6) BS02 ZN ? GO:0000993 ... P29055 36411341
    766410 7zsb:O (6.6) BS01 dna ? GO:0000126 ... P13393 36411341
    766411 7zsb:O (6.6) BS02 dna ? GO:0000126 ... P13393 36411341
    766412 7zsb:R (6.6) BS01 dna ? GO:0000993 ... P41896 36411341
    766413 7zsb:R (6.6) BS02 dna ? GO:0000993 ... P41896 36411341
    766414 7zsb:U (6.6) BS01 dna ? GO:0005672 ... P32773 36411341
    766415 7zsb:W (6.6) BS01 dna ? GO:0000993 ... P36100 36411341
    766416 7zsb:W (6.6) BS02 ZN ? GO:0000993 ... P36100 36411341
    766417 7zsb:a (6.6) BS01 dna ? GO:0000786 ... P84233 36411341
    766418 7zsb:a (6.6) BS02 dna ? GO:0000786 ... P84233 36411341
    766419 7zsb:b (6.6) BS01 dna ? GO:0000786 ... P62799 36411341
    766420 7zsb:b (6.6) BS02 dna ? GO:0000786 ... P62799 36411341
    766421 7zsb:c (6.6) BS01 dna ? GO:0000786 ... P06897 36411341
    766422 7zsb:c (6.6) BS02 dna ? GO:0000786 ... P06897 36411341
    766423 7zsb:d (6.6) BS01 dna ? GO:0000786 ... P02281 36411341
    766424 7zsb:d (6.6) BS02 dna ? GO:0000786 ... P02281 36411341
    766425 7zsb:e (6.6) BS01 dna ? GO:0000786 ... P84233 36411341
    766426 7zsb:e (6.6) BS02 dna ? GO:0000786 ... P84233 36411341
    766427 7zsb:f (6.6) BS01 dna ? GO:0000786 ... P62799 36411341
    766428 7zsb:f (6.6) BS02 dna ? GO:0000786 ... P62799 36411341
    766429 7zsb:g (6.6) BS01 dna ? GO:0000786 ... P06897 36411341
    766430 7zsb:g (6.6) BS02 dna ? GO:0000786 ... P06897 36411341
    766431 7zsb:h (6.6) BS01 dna ? GO:0000786 ... P02281 36411341
    766432 7zsb:h (6.6) BS02 dna ? GO:0000786 ... P02281 36411341
    766433 7zse:A (1.4) BS01 MG ? GO:0005737 ... P84308 35779405
    766434 7zse:A (1.4) BS02 ATP ? GO:0005737 ... P84308 35779405
    766435 7zse:B (1.4) BS01 ATP ? GO:0005737 ... P84253 35779405
    766436 7zsf:A (1.36) BS01 45D ? GO:0005515 ... P74102 36307413
    766437 7zsg:1 (1.39) BS01 45D ? GO:0005515 ... P74102 36307413
    766438 7zsh:1 (1.42) BS01 45D ? GO:0005515 ... P74102 36307413
    766439 7zsi:1 (1.399) BS01 45D ? GO:0005515 ... P74102 36307413
    766440 7zsj:1 (1.41) BS01 45D ? GO:0005515 ... P74102 36307413
    766441 7zsl:A (1.8) BS01 JTO 2.4.2.1 GO:0000255 ... P00491 37134237
    766442 7zsl:B (1.8) BS01 JTO 2.4.2.1 GO:0000255 ... P00491 37134237
    766443 7zsl:C (1.8) BS01 JTO 2.4.2.1 GO:0000255 ... P00491 37134237
    766444 7zsl:D (1.8) BS01 JTO 2.4.2.1 GO:0000255 ... P00491 37134237
    766445 7zsl:E (1.8) BS01 JTO 2.4.2.1 GO:0000255 ... P00491 37134237
    766446 7zsl:F (1.8) BS01 JTO 2.4.2.1 GO:0000255 ... P00491 37134237
    766447 7zsm:A (2.65) BS01 JU9 2.4.2.1 GO:0000255 ... P00491 37134237
    766448 7zsn:A (2.36) BS01 JSI 2.4.2.1 GO:0000255 ... P00491 37134237
    766449 7zsn:A (2.36) BS02 TEW 2.4.2.1 GO:0000255 ... P00491 37134237
    766450 7zsn:A (2.36) BS03 TEW 2.4.2.1 GO:0000255 ... P00491 37134237
    766451 7zso:A (1.95) BS01 JTC 2.4.2.1 GO:0000255 ... P00491 37134237
    766452 7zso:B (1.95) BS01 JTC 2.4.2.1 GO:0000255 ... P00491 37134237
    766453 7zso:C (1.95) BS01 JTC 2.4.2.1 GO:0000255 ... P00491 37134237
    766454 7zsp:A (2.29) BS01 JT3 2.4.2.1 GO:0000255 ... P00491 37134237
    766455 7zsp:A (2.29) BS02 TEW 2.4.2.1 GO:0000255 ... P00491 37134237
    766456 7zsp:A (2.29) BS03 TEW 2.4.2.1 GO:0000255 ... P00491 37134237
    766457 7zsp:A (2.29) BS04 TEW 2.4.2.1 GO:0000255 ... P00491 37134237
    766458 7zsq:A (1.77) BS01 JTO 2.4.2.1 GO:0003824 ... P9WP01 37134237
    766459 7zsq:A (1.77) BS02 TEW 2.4.2.1 GO:0003824 ... P9WP01 37134237
    766460 7zsq:B (1.77) BS01 TEW 2.4.2.1 GO:0003824 ... P9WP01 37134237
    766461 7zsq:B (1.77) BS02 JTO 2.4.2.1 GO:0003824 ... P9WP01 37134237
    766462 7zsq:B (1.77) BS03 P4K 2.4.2.1 GO:0003824 ... P9WP01 37134237
    766463 7zsq:C (1.77) BS01 JTO 2.4.2.1 GO:0003824 ... P9WP01 37134237
    766464 7zsr:A (1.97) BS01 JSI 2.4.2.1 GO:0003824 ... P9WP01 37134237
    766465 7zsr:B (1.97) BS01 JSI 2.4.2.1 GO:0003824 ... P9WP01 37134237
    766466 7zsr:C (1.97) BS01 JSI 2.4.2.1 GO:0003824 ... P9WP01 37134237
    766467 7zst:B (2.5) BS01 JUF 2.1.3.2 GO:0004070 ... A0A5K1K910 36195578
    766468 7zst:C (2.5) BS01 JUF 2.1.3.2 GO:0004070 ... A0A5K1K910 36195578
    766469 7zsu:A (2.2) BS01 JV3 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    766470 7zsu:A (2.2) BS02 HEM 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    766471 7zsu:A (2.2) BS03 JV3 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    766472 7zsu:B (2.2) BS01 JV3 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    766473 7zsu:B (2.2) BS02 HEM 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    766474 7zsu:C (2.2) BS01 JV3 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    766475 7zsu:C (2.2) BS02 HEM 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    766476 7zsv:A (1.74) BS01 HEC ? N/A G1UBD5 37100286
    766477 7zsv:B (1.74) BS01 HEC ? N/A G1UBD5 37100286
    766478 7zsv:B (1.74) BS02 ZN ? N/A G1UBD5 37100286
    766479 7zsw:A (1.94) BS01 HEC ? N/A G1UBD5 37100286
    766480 7zsw:B (1.94) BS01 HEC ? N/A G1UBD5 37100286
    766481 7zsw:B (1.94) BS02 ZN ? N/A G1UBD5 37100286
    766482 7zsx:A (1.77) BS01 HEC ? N/A G1UBD5 37100286
    766483 7zsx:B (1.77) BS01 HEC ? N/A G1UBD5 37100286
    766484 7zsx:B (1.77) BS02 ZN ? N/A G1UBD5 37100286
    766485 7zt0:A (1.99) BS01 HEM 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    766486 7zt0:A (1.99) BS02 JUR 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    766487 7zt0:B (1.99) BS01 HEM 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    766488 7zt0:B (1.99) BS02 JUR 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    766489 7zt2:A (2.4) BS01 2LJ ? N/A Q95460 37382893
    766490 7zt4:A (2.02) BS01 JSO ? N/A Q95460 37382893
    766491 7zt5:A (2.09) BS01 7ZS ? N/A Q95460 37382893
    766492 7zt6:B (3.5) BS01 IHP 3.6.4.- GO:0000723 ... P13010 37870477
    766493 7zt7:A (1.84) BS01 54G ? N/A Q95460 37382893
    766494 7zt8:A (2.29) BS01 OVV ? N/A Q95460 37382893
    766495 7zt9:A (2.13) BS01 4MA ? N/A Q95460 37382893
    766496 7zta:L021 (2.7) BS01 rna ? GO:0000027 ... P60422 37322159
    766497 7zta:L031 (2.7) BS01 rna ? GO:0000027 ... P60438 37322159
    766498 7zta:L041 (2.7) BS01 rna ? GO:0001070 ... P60723 37322159
    766499 7zta:L041 (2.7) BS02 MG ? GO:0001070 ... P60723 37322159
    766500 7zta:L051 (2.7) BS01 rna ? GO:0000027 ... P62399 37322159
    766501 7zta:L051 (2.7) BS02 rna ? GO:0000027 ... P62399 37322159
    766502 7zta:L051 (2.7) BS03 rna ? GO:0000027 ... P62399 37322159
    766503 7zta:L061 (2.7) BS01 rna ? GO:0000027 ... P0AG55 37322159
    766504 7zta:L091 (2.7) BS01 rna ? GO:0002181 ... P0A7R1 37322159
    766505 7zta:L131 (2.7) BS01 rna ? GO:0002181 ... P0AA10 37322159
    766506 7zta:L141 (2.7) BS01 rna ? GO:0002181 ... P0ADY3 37322159
    766507 7zta:L141 (2.7) BS02 rna ? GO:0002181 ... P0ADY3 37322159
    766508 7zta:L151 (2.7) BS01 rna ? GO:0002181 ... P02413 37322159
    766509 7zta:L161 (2.7) BS01 rna ? GO:0000027 ... P0ADY7 37322159
    766510 7zta:L161 (2.7) BS02 rna ? GO:0000027 ... P0ADY7 37322159
    766511 7zta:L161 (2.7) BS03 rna ? GO:0000027 ... P0ADY7 37322159
    766512 7zta:L171 (2.7) BS01 rna ? GO:0000027 ... P0AG44 37322159
    766513 7zta:L181 (2.7) BS01 rna ? GO:0002181 ... P0C018 37322159
    766514 7zta:L181 (2.7) BS02 rna ? GO:0002181 ... P0C018 37322159
    766515 7zta:L191 (2.7) BS01 rna ? GO:0000027 ... P0A7K6 37322159
    766516 7zta:L191 (2.7) BS02 rna ? GO:0000027 ... P0A7K6 37322159
    766517 7zta:L201 (2.7) BS01 rna ? GO:0000027 ... P0A7L3 37322159
    766518 7zta:L211 (2.7) BS01 rna ? GO:0002181 ... P0AG48 37322159
    766519 7zta:L221 (2.7) BS01 rna ? GO:0002181 ... P61175 37322159
    766520 7zta:L231 (2.7) BS01 rna ? GO:0000027 ... P0ADZ0 37322159
    766521 7zta:L241 (2.7) BS01 rna ? GO:0000027 ... P60624 37322159
    766522 7zta:L251 (2.7) BS01 rna ? GO:0000027 ... P68919 37322159
    766523 7zta:L271 (2.7) BS01 rna ? GO:0000027 ... P0A7L8 37322159
    766524 7zta:L271 (2.7) BS02 rna ? GO:0000027 ... P0A7L8 37322159
    766525 7zta:L281 (2.7) BS01 rna ? GO:0000027 ... P0A7M2 37322159
    766526 7zta:L291 (2.7) BS01 rna ? GO:0000027 ... P0A7M6 37322159
    766527 7zta:L301 (2.7) BS01 rna ? GO:0000027 ... P0AG51 37322159
    766528 7zta:L311 (2.7) BS01 rna ? GO:0002181 ... P0A7M9 37322159
    766529 7zta:L311 (2.7) BS02 ZN ? GO:0002181 ... P0A7M9 37322159
    766530 7zta:L321 (2.7) BS01 rna ? GO:0000027 ... P0A7N4 37322159
    766531 7zta:L331 (2.7) BS01 rna ? GO:0000027 ... P0A7N9 37322159
    766532 7zta:L341 (2.7) BS01 rna ? GO:0002181 ... P0A7P5 37322159
    766533 7zta:L351 (2.7) BS01 rna ? GO:0002181 ... P0A7Q1 37322159
    766534 7zta:L361 (2.7) BS01 rna ? GO:0002181 ... P0A7Q6 37322159
    766535 7zta:L361 (2.7) BS02 ZN ? GO:0002181 ... P0A7Q6 37322159
    766536 7zta:S021 (2.7) BS01 rna ? GO:0000028 ... P0A7V0 37322159
    766537 7zta:S021 (2.7) BS02 ZN ? GO:0000028 ... P0A7V0 37322159
    766538 7zta:S031 (2.7) BS01 rna ? GO:0003676 ... P0A7V3 37322159
    766539 7zta:S041 (2.7) BS01 rna ? GO:0000028 ... P0A7V8 37322159
    766540 7zta:S051 (2.7) BS01 rna ? GO:0000028 ... P0A7W1 37322159
    766541 7zta:S051 (2.7) BS02 rna ? GO:0000028 ... P0A7W1 37322159
    766542 7zta:S061 (2.7) BS01 rna ? GO:0003735 ... P02358 37322159
    766543 7zta:S071 (2.7) BS01 rna ? GO:0003723 ... P02359 37322159
    766544 7zta:S071 (2.7) BS02 rna ? GO:0003723 ... P02359 37322159
    766545 7zta:S081 (2.7) BS01 rna ? GO:0000028 ... P0A7W7 37322159
    766546 7zta:S091 (2.7) BS01 rna ? GO:0002181 ... P0A7X3 37322159
    766547 7zta:S101 (2.7) BS01 rna ? GO:0000049 ... P0A7R5 37322159
    766548 7zta:S111 (2.7) BS01 rna ? GO:0002181 ... P0A7R9 37322159
    766549 7zta:S121 (2.7) BS01 rna ? GO:0000049 ... P0A7S3 37322159
    766550 7zta:S131 (2.7) BS01 rna ? GO:0000049 ... P0A7S9 37322159
    766551 7zta:S141 (2.7) BS01 rna ? GO:0003735 ... P0AG59 37322159
    766552 7zta:S151 (2.7) BS01 rna ? GO:0000028 ... P0ADZ4 37322159
    766553 7zta:S151 (2.7) BS02 rna ? GO:0000028 ... P0ADZ4 37322159
    766554 7zta:S161 (2.7) BS01 rna ? GO:0000028 ... P0A7T3 37322159
    766555 7zta:S171 (2.7) BS01 rna ? GO:0000028 ... P0AG63 37322159
    766556 7zta:S181 (2.7) BS01 rna ? GO:0003735 ... P0A7T7 37322159
    766557 7zta:S191 (2.7) BS01 rna ? GO:0002181 ... P0A7U3 37322159
    766558 7zta:S201 (2.7) BS01 rna ? GO:0000028 ... P0A7U7 37322159
    766559 7zta:S211 (2.7) BS01 rna ? GO:0003735 ... P68679 37322159
    766560 7ztc:A (3.9) BS01 ADP 3.6.4.- GO:0000776 ... P60709 36586407
    766561 7ztc:B (3.9) BS01 ADP 3.6.4.- GO:0000776 ... P60709 36586407
    766562 7ztc:C (3.9) BS01 ADP 3.6.4.- GO:0000776 ... P60709 36586407
    766563 7ztc:D (3.9) BS01 ADP 3.6.4.- GO:0000776 ... P60709 36586407
    766564 7ztc:E (3.9) BS01 ADP 3.6.4.- GO:0000776 ... P60709 36586407
    766565 7ztc:F (3.9) BS01 ADP 3.6.4.- GO:0000776 ... P60709 36586407
    766566 7ztc:G (3.9) BS01 ADP 3.6.4.- GO:0000776 ... P60709 36586407
    766567 7ztc:H (3.9) BS01 ADP 3.6.4.- GO:0000776 ... P60709 36586407
    766568 7ztd:A (4.6) BS01 ADP 3.6.4.- GO:0000776 ... P60709 36586407
    766569 7ztd:B (4.6) BS01 ADP 3.6.4.- GO:0000776 ... P60709 36586407
    766570 7ztd:C (4.6) BS01 ADP 3.6.4.- GO:0000776 ... P60709 36586407
    766571 7ztd:D (4.6) BS01 ADP 3.6.4.- GO:0000776 ... P60709 36586407
    766572 7ztd:E (4.6) BS01 ADP 3.6.4.- GO:0000776 ... P60709 36586407
    766573 7ztd:F (4.6) BS01 ADP 3.6.4.- GO:0000776 ... P60709 36586407
    766574 7ztd:G (4.6) BS01 ADP 3.6.4.- GO:0000776 ... P60709 36586407
    766575 7ztd:H (4.6) BS01 ADP 3.6.4.- GO:0000776 ... P60709 36586407
    766576 7zti:A (2.09) BS01 HEC ? N/A G1UBD5 37100286
    766577 7zti:B (2.09) BS01 HEC ? N/A G1UBD5 37100286
    766578 7zti:B (2.09) BS02 ZN ? N/A G1UBD5 37100286
    766579 7ztk:A (2.6) BS01 COA 2.7.4.6 GO:0000287 ... P15532 37672589
    766580 7ztk:B (2.6) BS01 COA 2.7.4.6 GO:0000287 ... P15532 37672589
    766581 7ztk:C (2.6) BS01 COA 2.7.4.6 GO:0000287 ... P15532 37672589
    766582 7ztk:D (2.6) BS01 COA 2.7.4.6 GO:0000287 ... P15532 37672589
    766583 7ztk:E (2.6) BS01 COA 2.7.4.6 GO:0000287 ... P15532 37672589
    766584 7ztk:F (2.6) BS01 COA 2.7.4.6 GO:0000287 ... P15532 37672589
    766585 7ztl:A (1.9) BS01 peptide 2.7.11.1 GO:0004672 ... O14965 36601802
    766586 7ztl:A (1.9) BS02 ADP 2.7.11.1 GO:0004672 ... O14965 36601802
    766587 7ztl:A (1.9) BS03 MG 2.7.11.1 GO:0004672 ... O14965 36601802
    766588 7ztl:A (1.9) BS04 JWG 2.7.11.1 GO:0004672 ... O14965 36601802
    766589 7ztm:B (1.45) BS01 JVU 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003723 ... Q32ZE1 38809037
    766590 7ztv:A (1.94) BS01 DHT ? N/A P15207 36921044
    766591 7ztx:A (1.89) BS01 DHT ? N/A P10275 36921044
    766592 7ztz:A (1.4) BS01 DHT ? N/A P10275 36921044
    766593 7zu1:A (1.68) BS01 DHT ? N/A P10275 36921044
    766594 7zu2:A (1.74) BS01 DHT ? N/A P10275 36921044
    766595 7zu6:AAA (1.183) BS01 V4O 3.2.1.17 GO:0003796 ... P00698 37768728
    766596 7zu6:AAA (1.183) BS02 VVB 3.2.1.17 GO:0003796 ... P00698 37768728
    766597 7zu8:A (2.05) BS01 FUC 3.4.21.19 N/A A0A1L7NZU4 35915115
    766598 7zu8:A (2.05) BS02 K93 3.4.21.19 N/A A0A1L7NZU4 35915115
    766599 7zu8:A (2.05) BS03 K93 3.4.21.19 N/A A0A1L7NZU4 35915115
    766600 7zub:A (2.85) BS01 ADP ? GO:0003723 ... P08238 36385050

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).