SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    767601 8am5:a (3.1) BS26 CLA 1.97.1.12 GO:0000287 ... P29254 37542031
    767602 8am5:a (3.1) BS27 CLA 1.97.1.12 GO:0000287 ... P29254 37542031
    767603 8am5:a (3.1) BS28 CLA 1.97.1.12 GO:0000287 ... P29254 37542031
    767604 8am5:a (3.1) BS29 CLA 1.97.1.12 GO:0000287 ... P29254 37542031
    767605 8am5:a (3.1) BS30 CLA 1.97.1.12 GO:0000287 ... P29254 37542031
    767606 8am5:a (3.1) BS31 CLA 1.97.1.12 GO:0000287 ... P29254 37542031
    767607 8am5:a (3.1) BS32 CLA 1.97.1.12 GO:0000287 ... P29254 37542031
    767608 8am5:a (3.1) BS33 CLA 1.97.1.12 GO:0000287 ... P29254 37542031
    767609 8am5:a (3.1) BS34 CLA 1.97.1.12 GO:0000287 ... P29254 37542031
    767610 8am5:a (3.1) BS35 CLA 1.97.1.12 GO:0000287 ... P29254 37542031
    767611 8am5:a (3.1) BS36 CLA 1.97.1.12 GO:0000287 ... P29254 37542031
    767612 8am5:a (3.1) BS37 CLA 1.97.1.12 GO:0000287 ... P29254 37542031
    767613 8am5:a (3.1) BS38 CLA 1.97.1.12 GO:0000287 ... P29254 37542031
    767614 8am5:a (3.1) BS39 CLA 1.97.1.12 GO:0000287 ... P29254 37542031
    767615 8am5:a (3.1) BS40 CLA 1.97.1.12 GO:0000287 ... P29254 37542031
    767616 8am5:a (3.1) BS41 CLA 1.97.1.12 GO:0000287 ... P29254 37542031
    767617 8am5:a (3.1) BS42 CLA 1.97.1.12 GO:0000287 ... P29254 37542031
    767618 8am5:a (3.1) BS43 PQN 1.97.1.12 GO:0000287 ... P29254 37542031
    767619 8am5:a (3.1) BS44 SF4 1.97.1.12 GO:0000287 ... P29254 37542031
    767620 8am5:a (3.1) BS45 CLA 1.97.1.12 GO:0000287 ... P29254 37542031
    767621 8am5:a (3.1) BS46 45D 1.97.1.12 GO:0000287 ... P29254 37542031
    767622 8am5:a (3.1) BS47 CLA 1.97.1.12 GO:0000287 ... P29254 37542031
    767623 8am5:a (3.1) BS48 CLA 1.97.1.12 GO:0000287 ... P29254 37542031
    767624 8am5:a (3.1) BS49 CLA 1.97.1.12 GO:0000287 ... P29254 37542031
    767625 8am5:b (3.1) BS01 peptide 1.97.1.12 GO:0000287 ... P29255 37542031
    767626 8am5:b (3.1) BS02 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767627 8am5:b (3.1) BS03 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767628 8am5:b (3.1) BS04 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767629 8am5:b (3.1) BS05 SF4 1.97.1.12 GO:0000287 ... P29255 37542031
    767630 8am5:b (3.1) BS06 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767631 8am5:b (3.1) BS07 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767632 8am5:b (3.1) BS08 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767633 8am5:b (3.1) BS09 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767634 8am5:b (3.1) BS10 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767635 8am5:b (3.1) BS11 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767636 8am5:b (3.1) BS12 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767637 8am5:b (3.1) BS13 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767638 8am5:b (3.1) BS14 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767639 8am5:b (3.1) BS15 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767640 8am5:b (3.1) BS16 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767641 8am5:b (3.1) BS17 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767642 8am5:b (3.1) BS18 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767643 8am5:b (3.1) BS19 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767644 8am5:b (3.1) BS20 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767645 8am5:b (3.1) BS21 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767646 8am5:b (3.1) BS22 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767647 8am5:b (3.1) BS23 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767648 8am5:b (3.1) BS24 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767649 8am5:b (3.1) BS25 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767650 8am5:b (3.1) BS26 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767651 8am5:b (3.1) BS27 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767652 8am5:b (3.1) BS28 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767653 8am5:b (3.1) BS29 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767654 8am5:b (3.1) BS30 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767655 8am5:b (3.1) BS31 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767656 8am5:b (3.1) BS32 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767657 8am5:b (3.1) BS33 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767658 8am5:b (3.1) BS34 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767659 8am5:b (3.1) BS35 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767660 8am5:b (3.1) BS36 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767661 8am5:b (3.1) BS37 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767662 8am5:b (3.1) BS38 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767663 8am5:b (3.1) BS39 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767664 8am5:b (3.1) BS40 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767665 8am5:b (3.1) BS41 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767666 8am5:b (3.1) BS42 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767667 8am5:b (3.1) BS43 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767668 8am5:b (3.1) BS44 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767669 8am5:b (3.1) BS45 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767670 8am5:b (3.1) BS46 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767671 8am5:b (3.1) BS47 CLA 1.97.1.12 GO:0000287 ... P29255 37542031
    767672 8am5:b (3.1) BS48 PQN 1.97.1.12 GO:0000287 ... P29255 37542031
    767673 8am5:b (3.1) BS49 ECH 1.97.1.12 GO:0000287 ... P29255 37542031
    767674 8am5:b (3.1) BS50 ZEX 1.97.1.12 GO:0000287 ... P29255 37542031
    767675 8am5:c (3.1) BS01 SF4 1.97.1.12 GO:0009055 ... P32422 37542031
    767676 8am5:c (3.1) BS02 SF4 1.97.1.12 GO:0009055 ... P32422 37542031
    767677 8am5:f (3.1) BS01 CLA ? GO:0009522 ... P29256 37542031
    767678 8am5:f (3.1) BS02 CLA ? GO:0009522 ... P29256 37542031
    767679 8am5:f (3.1) BS03 CLA ? GO:0009522 ... P29256 37542031
    767680 8am5:f (3.1) BS04 CLA ? GO:0009522 ... P29256 37542031
    767681 8am5:f (3.1) BS05 CLA ? GO:0009522 ... P29256 37542031
    767682 8am5:f (3.1) BS06 ZEX ? GO:0009522 ... P29256 37542031
    767683 8am5:f (3.1) BS07 CLA ? GO:0009522 ... P29256 37542031
    767684 8am5:i (3.1) BS01 CLA ? GO:0009522 ... Q55330 37542031
    767685 8am5:j (3.1) BS01 CLA ? GO:0009522 ... Q55329 37542031
    767686 8am5:j (3.1) BS02 CLA ? GO:0009522 ... Q55329 37542031
    767687 8am5:j (3.1) BS03 ZEX ? GO:0009522 ... Q55329 37542031
    767688 8am5:j (3.1) BS04 CLA ? GO:0009522 ... Q55329 37542031
    767689 8am5:j (3.1) BS05 CLA ? GO:0009522 ... Q55329 37542031
    767690 8am5:k (3.1) BS01 CLA ? GO:0009522 ... P72712 37542031
    767691 8am5:k (3.1) BS02 CLA ? GO:0009522 ... P72712 37542031
    767692 8am5:k (3.1) BS03 CLA ? GO:0009522 ... P72712 37542031
    767693 8am5:k (3.1) BS04 CLA ? GO:0009522 ... P72712 37542031
    767694 8am5:k (3.1) BS05 CLA ? GO:0009522 ... P72712 37542031
    767695 8am5:k (3.1) BS06 CLA ? GO:0009522 ... P72712 37542031
    767696 8am5:l (3.1) BS01 CLA ? GO:0005886 ... P37277 37542031
    767697 8am5:l (3.1) BS02 CLA ? GO:0005886 ... P37277 37542031
    767698 8am5:l (3.1) BS03 CLA ? GO:0005886 ... P37277 37542031
    767699 8am5:l (3.1) BS04 CLA ? GO:0005886 ... P37277 37542031
    767700 8am5:l (3.1) BS05 CLA ? GO:0005886 ... P37277 37542031
    767701 8am5:l (3.1) BS06 CLA ? GO:0005886 ... P37277 37542031
    767702 8am5:l (3.1) BS07 CLA ? GO:0005886 ... P37277 37542031
    767703 8am5:m (3.1) BS01 CLA ? GO:0009522 ... P72986 37542031
    767704 8am5:m (3.1) BS02 ECH ? GO:0009522 ... P72986 37542031
    767705 8am6:AAA (1.33) BS01 FAD ? N/A F4G7N3 38550701
    767706 8am6:AAA (1.33) BS02 A2Q ? N/A F4G7N3 38550701
    767707 8am6:AAA (1.33) BS03 A2Q ? N/A F4G7N3 38550701
    767708 8am6:AAA (1.33) BS04 A2Q ? N/A F4G7N3 38550701
    767709 8am6:AAA (1.33) BS05 A2Q ? N/A F4G7N3 38550701
    767710 8am6:BaB (1.33) BS01 FAD ? N/A F4G7N3 38550701
    767711 8am6:BaB (1.33) BS02 A2Q ? N/A F4G7N3 38550701
    767712 8am6:BaB (1.33) BS03 A2Q ? N/A F4G7N3 38550701
    767713 8am6:BaB (1.33) BS04 A2Q ? N/A F4G7N3 38550701
    767714 8am6:BaB (1.33) BS05 A2Q ? N/A F4G7N3 38550701
    767715 8am7:A (1.5) BS01 peptide ? GO:0000122 ... P31947 37676236
    767716 8am7:A (1.5) BS02 MRF ? GO:0000122 ... P31947 37676236
    767717 8am8:AAA (1.85) BS01 FAD ? N/A F4G7N3 38550701
    767718 8am8:AAA (1.85) BS02 A2Q ? N/A F4G7N3 38550701
    767719 8am8:BBB (1.85) BS01 FAD ? N/A F4G7N3 38550701
    767720 8am8:BBB (1.85) BS02 A2Q ? N/A F4G7N3 38550701
    767721 8am9:0 (2.8) BS01 rna ? GO:0000027 ... P0A7N9 36997646
    767722 8am9:1 (2.8) BS01 rna ? GO:0002181 ... P0A7P5 36997646
    767723 8am9:2 (2.8) BS01 rna ? GO:0002181 ... P0A7Q1 36997646
    767724 8am9:3 (2.8) BS01 rna ? GO:0002181 ... P0A7Q6 36997646
    767725 8am9:3 (2.8) BS02 ZN ? GO:0002181 ... P0A7Q6 36997646
    767726 8am9:4 (2.8) BS01 rna ? GO:0002181 ... P0A7M9 36997646
    767727 8am9:4 (2.8) BS02 rna ? GO:0002181 ... P0A7M9 36997646
    767728 8am9:4 (2.8) BS03 ZN ? GO:0002181 ... P0A7M9 36997646
    767729 8am9:C (2.8) BS01 rna ? GO:0000028 ... P0A7V0 36997646
    767730 8am9:D (2.8) BS01 rna ? GO:0000028 ... P0A7V3 36997646
    767731 8am9:E (2.8) BS01 rna ? GO:0000028 ... P0A7V8 36997646
    767732 8am9:F (2.8) BS01 rna ? GO:0000028 ... P0A7W1 36997646
    767733 8am9:G (2.8) BS01 rna ? GO:0002181 ... P02358 36997646
    767734 8am9:H (2.8) BS01 rna ? GO:0000028 ... P02359 36997646
    767735 8am9:I (2.8) BS01 rna ? GO:0000028 ... P0A7W7 36997646
    767736 8am9:J (2.8) BS01 rna ? GO:0000049 ... P0A7X3 36997646
    767737 8am9:J (2.8) BS02 rna ? GO:0000049 ... P0A7X3 36997646
    767738 8am9:K (2.8) BS01 rna ? GO:0000049 ... P0A7R5 36997646
    767739 8am9:L (2.8) BS01 rna ? GO:0002181 ... P0A7R9 36997646
    767740 8am9:M (2.8) BS01 rna ? GO:0000049 ... P0A7S3 36997646
    767741 8am9:M (2.8) BS02 rna ? GO:0000049 ... P0A7S3 36997646
    767742 8am9:N (2.8) BS01 rna ? GO:0000049 ... P0A7S9 36997646
    767743 8am9:N (2.8) BS02 rna ? GO:0000049 ... P0A7S9 36997646
    767744 8am9:O (2.8) BS01 rna ? GO:0000028 ... P0AG59 36997646
    767745 8am9:P (2.8) BS01 rna ? GO:0000028 ... P0ADZ4 36997646
    767746 8am9:P (2.8) BS02 rna ? GO:0000028 ... P0ADZ4 36997646
    767747 8am9:Q (2.8) BS01 rna ? GO:0000028 ... P0A7T3 36997646
    767748 8am9:R (2.8) BS01 rna ? GO:0000028 ... P0AG63 36997646
    767749 8am9:S (2.8) BS01 rna ? GO:0002181 ... P0A7T7 36997646
    767750 8am9:T (2.8) BS01 rna ? GO:0000028 ... P0A7U3 36997646
    767751 8am9:U (2.8) BS01 rna ? GO:0000028 ... P0A7U7 36997646
    767752 8am9:V (2.8) BS01 rna ? GO:0000028 ... P68679 36997646
    767753 8am9:c (2.8) BS01 rna ? GO:0000027 ... P60422 36997646
    767754 8am9:c (2.8) BS02 rna ? GO:0000027 ... P60422 36997646
    767755 8am9:d (2.8) BS01 rna ? GO:0000027 ... P60438 36997646
    767756 8am9:e (2.8) BS01 rna ? GO:0001070 ... P60723 36997646
    767757 8am9:e (2.8) BS02 peptide ? GO:0001070 ... P60723 36997646
    767758 8am9:f (2.8) BS01 rna ? GO:0000027 ... P62399 36997646
    767759 8am9:f (2.8) BS02 rna ? GO:0000027 ... P62399 36997646
    767760 8am9:f (2.8) BS03 rna ? GO:0000027 ... P62399 36997646
    767761 8am9:g (2.8) BS01 rna ? GO:0000027 ... P0AG55 36997646
    767762 8am9:h (2.8) BS01 rna ? GO:0002181 ... P0A7R1 36997646
    767763 8am9:i (2.8) BS01 rna ? GO:0002181 ... P0AA10 36997646
    767764 8am9:j (2.8) BS01 rna ? GO:0002181 ... P0ADY3 36997646
    767765 8am9:j (2.8) BS02 rna ? GO:0002181 ... P0ADY3 36997646
    767766 8am9:k (2.8) BS01 rna ? GO:0002181 ... P02413 36997646
    767767 8am9:l (2.8) BS01 rna ? GO:0000027 ... P0ADY7 36997646
    767768 8am9:l (2.8) BS02 rna ? GO:0000027 ... P0ADY7 36997646
    767769 8am9:l (2.8) BS03 rna ? GO:0000027 ... P0ADY7 36997646
    767770 8am9:m (2.8) BS01 rna ? GO:0000027 ... P0AG44 36997646
    767771 8am9:n (2.8) BS01 rna ? GO:0002181 ... P0C018 36997646
    767772 8am9:n (2.8) BS02 rna ? GO:0002181 ... P0C018 36997646
    767773 8am9:o (2.8) BS01 rna ? GO:0000027 ... P0A7K6 36997646
    767774 8am9:o (2.8) BS02 rna ? GO:0000027 ... P0A7K6 36997646
    767775 8am9:p (2.8) BS01 rna ? GO:0000027 ... P0A7L3 36997646
    767776 8am9:q (2.8) BS01 rna ? GO:0002181 ... P0AG48 36997646
    767777 8am9:r (2.8) BS01 rna ? GO:0002181 ... P61175 36997646
    767778 8am9:r (2.8) BS02 peptide ? GO:0002181 ... P61175 36997646
    767779 8am9:s (2.8) BS01 rna ? GO:0000027 ... P0ADZ0 36997646
    767780 8am9:t (2.8) BS01 rna ? GO:0000027 ... P60624 36997646
    767781 8am9:u (2.8) BS01 rna ? GO:0000027 ... P68919 36997646
    767782 8am9:v (2.8) BS01 rna ? GO:0000027 ... P0A7L8 36997646
    767783 8am9:v (2.8) BS02 rna ? GO:0000027 ... P0A7L8 36997646
    767784 8am9:w (2.8) BS01 rna ? GO:0000027 ... P0A7M2 36997646
    767785 8am9:x (2.8) BS01 rna ? GO:0000027 ... P0A7M6 36997646
    767786 8am9:y (2.8) BS01 rna ? GO:0000027 ... P0AG51 36997646
    767787 8am9:y (2.8) BS02 rna ? GO:0000027 ... P0AG51 36997646
    767788 8am9:z (2.8) BS01 rna ? GO:0000027 ... P0A7N4 36997646
    767789 8amd:A (3.9) BS01 dna ? GO:0003677 ... P0A452 36806960
    767790 8amd:A (3.9) BS02 AGS ? GO:0003677 ... P0A452 36806960
    767791 8amd:A (3.9) BS03 AGS ? GO:0003677 ... P0A452 36806960
    767792 8amd:B (3.9) BS01 dna ? GO:0003677 ... P0A452 36806960
    767793 8amd:B (3.9) BS02 AGS ? GO:0003677 ... P0A452 36806960
    767794 8amd:B (3.9) BS03 AGS ? GO:0003677 ... P0A452 36806960
    767795 8amd:F (3.9) BS01 dna ? GO:0003677 ... P0A452 36806960
    767796 8amd:F (3.9) BS02 AGS ? GO:0003677 ... P0A452 36806960
    767797 8amd:F (3.9) BS03 AGS ? GO:0003677 ... P0A452 36806960
    767798 8amd:G (3.9) BS01 AGS ? GO:0003677 ... P0A452 36806960
    767799 8amf:A (3.8) BS01 dna ? GO:0003677 ... P0A452 36806960
    767800 8amf:A (3.8) BS02 dna ? GO:0003677 ... P0A452 36806960

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).