SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    768001 8a22:Aj (2.91) BS05 rna N/A GO:0003735 ... N/A 36253367
    768002 8a22:Ak (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    768003 8a22:Ak (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    768004 8a22:Ak (2.91) BS03 rna N/A GO:0003735 ... N/A 36253367
    768005 8a22:Ak (2.91) BS04 rna N/A GO:0003735 ... N/A 36253367
    768006 8a22:Ak (2.91) BS05 rna N/A GO:0003735 ... N/A 36253367
    768007 8a22:Ak (2.91) BS06 rna N/A GO:0003735 ... N/A 36253367
    768008 8a22:Al (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    768009 8a22:Al (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    768010 8a22:Al (2.91) BS03 rna N/A GO:0003735 ... N/A 36253367
    768011 8a22:Am (2.91) BS01 rna N/A N/A N/A 36253367
    768012 8a22:Am (2.91) BS02 rna N/A N/A N/A 36253367
    768013 8a22:An (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    768014 8a22:Ao (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    768015 8a22:Ao (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    768016 8a22:Ao (2.91) BS03 rna N/A GO:0003735 ... N/A 36253367
    768017 8a22:Ao (2.91) BS04 rna N/A GO:0003735 ... N/A 36253367
    768018 8a22:Ap (2.91) BS01 rna N/A GO:0003723 ... N/A 36253367
    768019 8a22:Ap (2.91) BS02 rna N/A GO:0003723 ... N/A 36253367
    768020 8a22:Ap (2.91) BS03 rna N/A GO:0003723 ... N/A 36253367
    768021 8a22:Ap (2.91) BS04 rna N/A GO:0003723 ... N/A 36253367
    768022 8a22:Ap (2.91) BS05 rna N/A GO:0003723 ... N/A 36253367
    768023 8a22:Aq (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    768024 8a22:Aq (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    768025 8a22:Aq (2.91) BS03 rna N/A GO:0003735 ... N/A 36253367
    768026 8a22:Aq (2.91) BS04 rna N/A GO:0003735 ... N/A 36253367
    768027 8a22:Aq (2.91) BS05 rna N/A GO:0003735 ... N/A 36253367
    768028 8a22:Aq (2.91) BS06 peptide N/A GO:0003735 ... N/A 36253367
    768029 8a22:Ar (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    768030 8a22:Ar (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    768031 8a22:Ar (2.91) BS03 peptide N/A GO:0003735 ... N/A 36253367
    768032 8a22:At (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    768033 8a22:Au (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    768034 8a22:Au (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    768035 8a22:Av (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    768036 8a22:Ax (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    768037 8a22:Ax (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    768038 8a22:Ax (2.91) BS03 rna N/A GO:0003735 ... N/A 36253367
    768039 8a22:Az (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    768040 8a22:Az (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    768041 8a22:Az (2.91) BS03 rna N/A GO:0003735 ... N/A 36253367
    768042 8a22:Az (2.91) BS04 rna N/A GO:0003735 ... N/A 36253367
    768043 8a22:BB (2.91) BS01 rna N/A N/A N/A 36253367
    768044 8a22:BB (2.91) BS02 rna N/A N/A N/A 36253367
    768045 8a22:BC (2.91) BS01 rna N/A N/A N/A 36253367
    768046 8a22:BC (2.91) BS02 rna N/A N/A N/A 36253367
    768047 8a22:BC (2.91) BS03 rna N/A N/A N/A 36253367
    768048 8a22:BD (2.91) BS01 rna N/A N/A N/A 36253367
    768049 8a22:BE (2.91) BS01 rna N/A N/A N/A 36253367
    768050 8a22:BF (2.91) BS01 rna N/A N/A N/A 36253367
    768051 8a22:BF (2.91) BS02 rna N/A N/A N/A 36253367
    768052 8a22:BF (2.91) BS03 rna N/A N/A N/A 36253367
    768053 8a22:Ba (2.91) BS01 peptide N/A N/A N/A 36253367
    768054 8a22:Ba (2.91) BS02 peptide N/A N/A N/A 36253367
    768055 8a22:Bc (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    768056 8a22:Bd (2.91) BS01 rna N/A N/A N/A 36253367
    768057 8a22:Bd (2.91) BS02 rna N/A N/A N/A 36253367
    768058 8a22:Be (2.91) BS01 rna N/A GO:0003723 ... N/A 36253367
    768059 8a22:Be (2.91) BS02 rna N/A GO:0003723 ... N/A 36253367
    768060 8a22:Be (2.91) BS03 rna N/A GO:0003723 ... N/A 36253367
    768061 8a22:Be (2.91) BS04 rna N/A GO:0003723 ... N/A 36253367
    768062 8a22:Bf (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    768063 8a22:Bg (2.91) BS01 rna N/A GO:0006412 ... N/A 36253367
    768064 8a22:Bh (2.91) BS01 rna N/A N/A N/A 36253367
    768065 8a22:Bh (2.91) BS02 rna N/A N/A N/A 36253367
    768066 8a22:Bh (2.91) BS03 rna N/A N/A N/A 36253367
    768067 8a22:Bi (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    768068 8a22:Bi (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    768069 8a22:Bj (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    768070 8a22:Bj (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    768071 8a22:Bk (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    768072 8a22:Bk (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    768073 8a22:Bl (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    768074 8a22:Bl (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    768075 8a22:Bl (2.91) BS03 rna N/A GO:0003735 ... N/A 36253367
    768076 8a22:Bm (2.91) BS01 rna N/A GO:0003676 ... N/A 36253367
    768077 8a22:Bm (2.91) BS02 rna N/A GO:0003676 ... N/A 36253367
    768078 8a22:Bm (2.91) BS03 MG N/A GO:0003676 ... N/A 36253367
    768079 8a22:Bn (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    768080 8a22:Bn (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    768081 8a22:Bo (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    768082 8a22:Bp (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    768083 8a22:Bq (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    768084 8a22:Bq (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    768085 8a22:Bq (2.91) BS03 rna N/A GO:0003735 ... N/A 36253367
    768086 8a22:Br (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    768087 8a22:Bs (2.91) BS01 rna N/A GO:0003723 ... N/A 36253367
    768088 8a22:Bs (2.91) BS02 rna N/A GO:0003723 ... N/A 36253367
    768089 8a22:Bt (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    768090 8a22:Bu (2.91) BS01 peptide N/A N/A N/A 36253367
    768091 8a22:Bv (2.91) BS01 rna N/A N/A N/A 36253367
    768092 8a22:Bv (2.91) BS02 rna N/A N/A N/A 36253367
    768093 8a22:Bw (2.91) BS01 rna N/A N/A N/A 36253367
    768094 8a22:Bw (2.91) BS02 ATP N/A N/A N/A 36253367
    768095 8a22:By (2.91) BS01 rna N/A N/A N/A 36253367
    768096 8a22:Bz (2.91) BS01 rna N/A GO:0003735 ... N/A 36253367
    768097 8a22:Bz (2.91) BS02 rna N/A GO:0003735 ... N/A 36253367
    768098 8a22:Xa (2.91) BS01 rna N/A N/A N/A 36253367
    768099 8a22:Xb (2.91) BS01 rna N/A N/A N/A 36253367
    768100 8a22:Xc (2.91) BS01 rna N/A N/A N/A 36253367
    768101 8a22:Xd (2.91) BS01 rna N/A N/A N/A 36253367
    768102 8a22:Xd (2.91) BS02 rna N/A N/A N/A 36253367
    768103 8a22:Xe (2.91) BS01 rna N/A N/A N/A 36253367
    768104 8a22:Xe (2.91) BS02 rna N/A N/A N/A 36253367
    768105 8a22:Xe (2.91) BS03 rna N/A N/A N/A 36253367
    768106 8a22:Xf (2.91) BS01 rna N/A N/A N/A 36253367
    768107 8a22:Xg (2.91) BS01 rna N/A N/A N/A 36253367
    768108 8a22:Xg (2.91) BS02 rna N/A N/A N/A 36253367
    768109 8a22:Ya (2.91) BS01 rna N/A N/A N/A 36253367
    768110 8a22:Ya (2.91) BS02 rna N/A N/A N/A 36253367
    768111 8a22:Yd (2.91) BS01 rna N/A N/A N/A 36253367
    768112 8a22:Ye (2.91) BS01 rna N/A N/A N/A 36253367
    768113 8a22:Yl (2.91) BS01 rna N/A N/A N/A 36253367
    768114 8a23:A (2.8) BS01 KW6 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0004483 ... P0DTD1 N/A
    768115 8a23:B (2.8) BS01 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0003723 ... P0DTD1 N/A
    768116 8a23:B (2.8) BS02 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0003723 ... P0DTD1 N/A
    768117 8a25:A (1.73) BS01 BU3 2.3.1.43 GO:0004607 ... A0A378KFD4 38130174
    768118 8a26:A (1.45) BS01 BU3 2.3.1.43 GO:0004607 ... A0A378KFD4 38130174
    768119 8a26:A (1.45) BS02 BU3 2.3.1.43 GO:0004607 ... A0A378KFD4 38130174
    768120 8a27:A (1.07) BS01 KY9 2.7.10.1 GO:0004672 ... P00533 36178776
    768121 8a28:A (2.4) BS01 ZN 3.4.24.- GO:0004222 ... B4F320 36322418
    768122 8a28:A (2.4) BS02 MG 3.4.24.- GO:0004222 ... B4F320 36322418
    768123 8a28:B (2.4) BS01 ZN 3.4.24.- GO:0004222 ... B4F320 36322418
    768124 8a29:A (2.1) BS01 MG 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768125 8a29:A (2.1) BS02 MG 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768126 8a29:A (2.1) BS03 CA 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768127 8a29:B (2.1) BS01 MG 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768128 8a29:B (2.1) BS02 MG 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768129 8a29:B (2.1) BS03 MG 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768130 8a29:B (2.1) BS04 MG 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768131 8a29:C (2.1) BS01 MG 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768132 8a29:C (2.1) BS02 MG 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768133 8a29:D (2.1) BS01 MG 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768134 8a29:D (2.1) BS02 CA 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768135 8a29:D (2.1) BS03 CA 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768136 8a29:D (2.1) BS04 CA 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768137 8a29:E (2.1) BS01 MG 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768138 8a29:E (2.1) BS02 CA 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768139 8a29:E (2.1) BS03 CA 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768140 8a29:F (2.1) BS01 MG 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768141 8a29:F (2.1) BS02 MG 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768142 8a29:F (2.1) BS03 CA 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768143 8a29:F (2.1) BS04 CA 2.2.1.7 GO:0008661 ... B7V7R4 37567475
    768144 8a2a:A (1.43) BS01 KY9 2.7.10.1 GO:0004672 ... P00533 36178776
    768145 8a2b:A (1.69) BS01 KY9 2.7.10.1 GO:0004672 ... P00533 36178776
    768146 8a2c:A (1.6) BS01 MG N/A N/A N/A 37549040
    768147 8a2c:B (1.6) BS01 MG N/A N/A N/A 37549040
    768148 8a2d:A (1.11) BS01 KXY 2.7.10.1 GO:0004672 ... P00533 36178776
    768149 8a2h:A (2.69) BS01 OK6 ? GO:0002218 ... Q86WV6 36201304
    768150 8a2h:B (2.69) BS01 OK6 ? GO:0002218 ... Q86WV6 36201304
    768151 8a2i:A (2.16) BS01 KWF ? GO:0002218 ... Q86WV6 36201304
    768152 8a2i:B (2.16) BS01 KWF ? GO:0002218 ... Q86WV6 36201304
    768153 8a2j:A (2.32) BS01 KWO ? GO:0002218 ... Q86WV6 36201304
    768154 8a2j:B (2.32) BS01 KWO ? GO:0002218 ... Q86WV6 36201304
    768155 8a2k:A (1.89) BS01 KXD ? GO:0002218 ... Q86WV6 36201304
    768156 8a2k:B (1.89) BS01 KXD ? GO:0002218 ... Q86WV6 36201304
    768157 8a2l:AAA (2.301) BS01 FE 1.16.3.1 GO:0004322 ... P02794 36714262
    768158 8a2m:AAA (1.57) BS01 MG 1.16.3.1 GO:0004322 ... P02794 36714262
    768159 8a2m:AAA (1.57) BS02 FE 1.16.3.1 GO:0004322 ... P02794 36714262
    768160 8a2o:A (3.45) BS01 TEP ? GO:0001609 ... P0ABE7
    P29274
    37791355
    768161 8a2o:A (3.45) BS02 CLR ? GO:0001609 ... P0ABE7
    P29274
    37791355
    768162 8a2o:A (3.45) BS03 CLR ? GO:0001609 ... P0ABE7
    P29274
    37791355
    768163 8a2p:A (3.5) BS01 9Y2 ? GO:0001609 ... P0ABE7
    P29274
    37791355
    768164 8a2p:A (3.5) BS02 CLR ? GO:0001609 ... P0ABE7
    P29274
    37791355
    768165 8a2p:A (3.5) BS03 CLR ? GO:0001609 ... P0ABE7
    P29274
    37791355
    768166 8a2p:A (3.5) BS04 CLR ? GO:0001609 ... P0ABE7
    P29274
    37791355
    768167 8a2r:A (2.17) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    768168 8a2r:A (2.17) BS02 BEF 3.6.4.- GO:0000287 ... P68135 36289337
    768169 8a2r:B (2.17) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    768170 8a2r:B (2.17) BS02 BEF 3.6.4.- GO:0000287 ... P68135 36289337
    768171 8a2r:C (2.17) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    768172 8a2r:C (2.17) BS02 BEF 3.6.4.- GO:0000287 ... P68135 36289337
    768173 8a2r:D (2.17) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    768174 8a2r:D (2.17) BS02 BEF 3.6.4.- GO:0000287 ... P68135 36289337
    768175 8a2r:E (2.17) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    768176 8a2r:E (2.17) BS02 BEF 3.6.4.- GO:0000287 ... P68135 36289337
    768177 8a2s:A (2.22) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    768178 8a2s:A (2.22) BS02 PO4 3.6.4.- GO:0000287 ... P68135 36289337
    768179 8a2s:B (2.22) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    768180 8a2s:B (2.22) BS02 PO4 3.6.4.- GO:0000287 ... P68135 36289337
    768181 8a2s:C (2.22) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    768182 8a2s:C (2.22) BS02 PO4 3.6.4.- GO:0000287 ... P68135 36289337
    768183 8a2s:D (2.22) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    768184 8a2s:D (2.22) BS02 PO4 3.6.4.- GO:0000287 ... P68135 36289337
    768185 8a2s:E (2.22) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    768186 8a2s:E (2.22) BS02 PO4 3.6.4.- GO:0000287 ... P68135 36289337
    768187 8a2t:A (2.24) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    768188 8a2t:B (2.24) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    768189 8a2t:C (2.24) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    768190 8a2t:D (2.24) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    768191 8a2t:E (2.24) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    768192 8a2u:A (2.21) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    768193 8a2u:A (2.21) BS02 BEF 3.6.4.- GO:0000287 ... P68135 36289337
    768194 8a2u:B (2.21) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    768195 8a2u:B (2.21) BS02 BEF 3.6.4.- GO:0000287 ... P68135 36289337
    768196 8a2u:C (2.21) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    768197 8a2u:C (2.21) BS02 BEF 3.6.4.- GO:0000287 ... P68135 36289337
    768198 8a2u:D (2.21) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    768199 8a2u:D (2.21) BS02 BEF 3.6.4.- GO:0000287 ... P68135 36289337
    768200 8a2u:E (2.21) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).