SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 3832 3833 3834 3835 3836 3837 3838 3839 3840 3841 3842 3843 3844 3845 3846 3847 3848 3849 3850 3851 3852 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    768201 8a2u:E (2.21) BS02 BEF 3.6.4.- GO:0000287 ... P68135 36289337
    768202 8a2v:A (1.59) BS01 FMN 2.7.11.1 N/A P93025 36381146
    768203 8a2w:A (2.04) BS01 FMN 2.7.11.1 N/A P93025 36381146
    768204 8a2w:B (2.04) BS01 FMN 2.7.11.1 N/A P93025 36381146
    768205 8a2x:A (3.0) BS01 KZA ? GO:0002218 ... Q86WV6 N/A
    768206 8a2y:A (2.15) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    768207 8a2y:A (2.15) BS02 PO4 3.6.4.- GO:0000287 ... P68135 36289337
    768208 8a2y:B (2.15) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    768209 8a2y:B (2.15) BS02 PO4 3.6.4.- GO:0000287 ... P68135 36289337
    768210 8a2y:C (2.15) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    768211 8a2y:C (2.15) BS02 PO4 3.6.4.- GO:0000287 ... P68135 36289337
    768212 8a2y:D (2.15) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    768213 8a2y:D (2.15) BS02 PO4 3.6.4.- GO:0000287 ... P68135 36289337
    768214 8a2y:E (2.15) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    768215 8a2y:E (2.15) BS02 PO4 3.6.4.- GO:0000287 ... P68135 36289337
    768216 8a2z:A (2.15) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    768217 8a2z:B (2.15) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    768218 8a2z:C (2.15) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    768219 8a2z:D (2.15) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    768220 8a2z:E (2.15) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    768221 8a30:A (1.45) BS01 MG ? N/A A9WIU3 37952891
    768222 8a31:A (1.46) BS01 KV0 ? GO:0000976 ... P04637 36407959
    768223 8a31:A (1.46) BS02 ZN ? GO:0000976 ... P04637 36407959
    768224 8a31:B (1.46) BS01 KV0 ? GO:0000976 ... P04637 36407959
    768225 8a31:B (1.46) BS02 ZN ? GO:0000976 ... P04637 36407959
    768226 8a32:A (1.47) BS01 KVA ? GO:0000976 ... P04637 36407959
    768227 8a32:A (1.47) BS02 ZN ? GO:0000976 ... P04637 36407959
    768228 8a32:B (1.47) BS01 KVA ? GO:0000976 ... P04637 36407959
    768229 8a32:B (1.47) BS02 ZN ? GO:0000976 ... P04637 36407959
    768230 8a33:A (2.95) BS01 JGC ? N/A Q88E39 N/A
    768231 8a34:A (1.9) BS01 KYI 3.6.1.-
    3.6.1.56
    GO:0005515 ... P36639 N/A
    768232 8a34:B (1.9) BS01 KYI 3.6.1.-
    3.6.1.56
    GO:0005515 ... P36639 N/A
    768233 8a36:A (2.7) BS01 FMN ? N/A Q88E39 N/A
    768234 8a36:B (2.7) BS01 FMN ? N/A Q88E39 N/A
    768235 8a36:C (2.7) BS01 FMN ? N/A Q88E39 N/A
    768236 8a36:D (2.7) BS01 FMN ? N/A Q88E39 N/A
    768237 8a37:A (1.91) BS01 FMN ? N/A Q88E39 N/A
    768238 8a38:A (2.196) BS01 ZN 2.3.2.27 N/A Q9C040 N/A
    768239 8a38:A (2.196) BS02 ZN 2.3.2.27 N/A Q9C040 N/A
    768240 8a38:B (2.196) BS01 ZN 2.3.2.27 N/A Q9C040 N/A
    768241 8a38:B (2.196) BS02 ZN 2.3.2.27 N/A Q9C040 N/A
    768242 8a38:C (2.196) BS01 ZN 2.3.2.27 N/A Q9C040 N/A
    768243 8a38:C (2.196) BS02 ZN 2.3.2.27 N/A Q9C040 N/A
    768244 8a3a:A (1.6) BS01 KYR 3.6.1.-
    3.6.1.56
    GO:0005515 ... P36639 N/A
    768245 8a3d:D (1.67) BS01 rna ? GO:0002181 ... P62917 36909531
    768246 8a3d:E (1.67) BS01 rna ? GO:0002181 ... P39023 36909531
    768247 8a3d:F (1.67) BS01 rna ? GO:0002181 ... P36578 36909531
    768248 8a3d:F (1.67) BS02 rna ? GO:0002181 ... P36578 36909531
    768249 8a3d:G (1.67) BS01 rna ? GO:0000027 ... P46777 36909531
    768250 8a3d:G (1.67) BS02 rna ? GO:0000027 ... P46777 36909531
    768251 8a3d:H (1.67) BS01 rna ? GO:0002181 ... Q02878 36909531
    768252 8a3d:I (1.67) BS01 rna ? GO:0002181 ... P40429 36909531
    768253 8a3d:J (1.67) BS01 rna ? GO:0002181 ... P18621 36909531
    768254 8a3d:J (1.67) BS02 rna ? GO:0002181 ... P18621 36909531
    768255 8a3d:K (1.67) BS01 rna ? GO:0002181 ... Q07020 36909531
    768256 8a3d:L (1.67) BS01 rna ? GO:0002181 ... P84098 36909531
    768257 8a3d:M (1.67) BS01 rna ? GO:0002181 ... Q02543 36909531
    768258 8a3d:M (1.67) BS02 rna ? GO:0002181 ... Q02543 36909531
    768259 8a3d:N (1.67) BS01 rna ? GO:0001650 ... P46778 36909531
    768260 8a3d:N (1.67) BS02 rna ? GO:0001650 ... P46778 36909531
    768261 8a3d:O (1.67) BS01 rna ? GO:0002181 ... P35268 36909531
    768262 8a3d:P (1.67) BS01 rna ? GO:0000122 ... P62829 36909531
    768263 8a3d:Q (1.67) BS01 rna ? GO:0002181 ... P83731 36909531
    768264 8a3d:R (1.67) BS01 rna ? GO:0002181 ... P62750 36909531
    768265 8a3d:R (1.67) BS02 rna ? GO:0002181 ... P62750 36909531
    768266 8a3d:S (1.67) BS01 rna ? GO:0002181 ... P61254 36909531
    768267 8a3d:S (1.67) BS02 rna ? GO:0002181 ... P61254 36909531
    768268 8a3d:T (1.67) BS01 rna ? GO:0002181 ... P61353 36909531
    768269 8a3d:U (1.67) BS01 rna ? GO:0002181 ... P46776 36909531
    768270 8a3d:V (1.67) BS01 rna ? GO:0002181 ... P47914 36909531
    768271 8a3d:W (1.67) BS01 rna ? GO:0002181 ... P62888 36909531
    768272 8a3d:X (1.67) BS01 rna ? GO:0002181 ... P62899 36909531
    768273 8a3d:Y (1.67) BS01 rna ? GO:0002181 ... P62910 36909531
    768274 8a3d:Z (1.67) BS01 rna ? GO:0002181 ... P18077 36909531
    768275 8a3d:a (1.67) BS01 rna ? GO:0002181 ... P49207 36909531
    768276 8a3d:a (1.67) BS02 ZN ? GO:0002181 ... P49207 36909531
    768277 8a3d:b (1.67) BS01 rna ? GO:0000463 ... P42766 36909531
    768278 8a3d:b (1.67) BS02 rna ? GO:0000463 ... P42766 36909531
    768279 8a3d:c (1.67) BS01 rna ? GO:0002181 ... Q9Y3U8 36909531
    768280 8a3d:d (1.67) BS01 rna ? GO:0000448 ... P61927 36909531
    768281 8a3d:d (1.67) BS02 rna ? GO:0000448 ... P61927 36909531
    768282 8a3d:d (1.67) BS03 ZN ? GO:0000448 ... P61927 36909531
    768283 8a3d:e (1.67) BS01 rna ? GO:0002181 ... P63173 36909531
    768284 8a3d:f (1.67) BS01 rna ? GO:0002181 ... P62891 36909531
    768285 8a3d:f (1.67) BS02 rna ? GO:0002181 ... P62891 36909531
    768286 8a3d:g (1.67) BS01 rna ? GO:0003735 ... P62987 36909531
    768287 8a3d:g (1.67) BS02 ZN ? GO:0003735 ... P62987 36909531
    768288 8a3d:h (1.67) BS01 rna ? GO:0000054 ... P56537 36909531
    768289 8a3d:i (1.67) BS01 rna ? GO:0002181 ... P83881 36909531
    768290 8a3d:i (1.67) BS02 ZN ? GO:0002181 ... P83881 36909531
    768291 8a3d:j (1.67) BS01 rna ? GO:0002181 ... P61513 36909531
    768292 8a3d:j (1.67) BS02 ZN ? GO:0002181 ... P61513 36909531
    768293 8a3d:k (1.67) BS01 rna ? GO:0002181 ... P46779 36909531
    768294 8a3d:l (1.67) BS01 rna ? GO:0002181 ... P61313 36909531
    768295 8a3d:l (1.67) BS02 rna ? GO:0002181 ... P61313 36909531
    768296 8a3d:m (1.67) BS01 rna ? GO:0000463 ... P18124 36909531
    768297 8a3d:m (1.67) BS02 rna ? GO:0000463 ... P18124 36909531
    768298 8a3d:n (1.67) BS01 rna ? GO:0000470 ... P62424 36909531
    768299 8a3d:n (1.67) BS02 rna ? GO:0000470 ... P62424 36909531
    768300 8a3d:o (1.67) BS01 rna ? GO:0002181 ... P32969 36909531
    768301 8a3d:p (1.67) BS01 rna ? GO:0000122 ... P27635 36909531
    768302 8a3d:p (1.67) BS02 rna ? GO:0000122 ... P27635 36909531
    768303 8a3d:q (1.67) BS01 rna ? GO:0000027 ... P62913 36909531
    768304 8a3d:q (1.67) BS02 rna ? GO:0000027 ... P62913 36909531
    768305 8a3d:r (1.67) BS01 rna ? GO:0002181 ... P26373 36909531
    768306 8a3d:r (1.67) BS02 rna ? GO:0002181 ... P26373 36909531
    768307 8a3d:s (1.67) BS01 rna ? GO:0003723 ... P50914 36909531
    768308 8a3f:AAA (3.15) BS01 PYC 5.1.1.4 GO:0003824 ... E3PTZ4 N/A
    768309 8a3f:BBB (3.15) BS01 PYC 5.1.1.4 GO:0003824 ... E3PTZ4 N/A
    768310 8a3h:A (0.97) BS01 IDC 3.2.1.4 GO:0000272 ... O85465 N/A MOAD: Ki=88uM
    768311 8a3l:0 (3.42) BS01 rna ? GO:0000027 ... P0A7N9 36840711
    768312 8a3l:1 (3.42) BS01 rna ? GO:0002181 ... P0A7P5 36840711
    768313 8a3l:2 (3.42) BS01 rna ? GO:0002181 ... P0A7Q1 36840711
    768314 8a3l:3 (3.42) BS01 rna ? GO:0002181 ... P0A7Q6 36840711
    768315 8a3l:3 (3.42) BS02 ZN ? GO:0002181 ... P0A7Q6 36840711
    768316 8a3l:4 (3.42) BS01 rna ? GO:0002181 ... P0A7M9 36840711
    768317 8a3l:4 (3.42) BS02 rna ? GO:0002181 ... P0A7M9 36840711
    768318 8a3l:4 (3.42) BS03 ZN ? GO:0002181 ... P0A7M9 36840711
    768319 8a3l:B (3.42) BS01 rna ? GO:0000028 ... P0A7V0 36840711
    768320 8a3l:C (3.42) BS01 rna ? GO:0003676 ... P0A7V3 36840711
    768321 8a3l:D (3.42) BS01 rna ? GO:0000028 ... P0A7V8 36840711
    768322 8a3l:E (3.42) BS01 rna ? GO:0000028 ... P0A7W1 36840711
    768323 8a3l:F (3.42) BS01 rna ? GO:0002181 ... P02358 36840711
    768324 8a3l:G (3.42) BS01 rna ? GO:0000028 ... P02359 36840711
    768325 8a3l:G (3.42) BS02 rna ? GO:0000028 ... P02359 36840711
    768326 8a3l:H (3.42) BS01 rna ? GO:0000028 ... P0A7W7 36840711
    768327 8a3l:I (3.42) BS01 rna ? GO:0002181 ... P0A7X3 36840711
    768328 8a3l:I (3.42) BS02 rna ? GO:0002181 ... P0A7X3 36840711
    768329 8a3l:J (3.42) BS01 rna ? GO:0000049 ... P0A7R5 36840711
    768330 8a3l:K (3.42) BS01 rna ? GO:0002181 ... P0A7R9 36840711
    768331 8a3l:L (3.42) BS01 rna ? GO:0000049 ... P0A7S3 36840711
    768332 8a3l:M (3.42) BS01 rna ? GO:0000049 ... P0A7S9 36840711
    768333 8a3l:M (3.42) BS02 rna ? GO:0000049 ... P0A7S9 36840711
    768334 8a3l:N (3.42) BS01 rna ? GO:0000028 ... P0AG59 36840711
    768335 8a3l:O (3.42) BS01 rna ? GO:0000028 ... P0ADZ4 36840711
    768336 8a3l:O (3.42) BS02 rna ? GO:0000028 ... P0ADZ4 36840711
    768337 8a3l:P (3.42) BS01 rna ? GO:0000028 ... P0A7T3 36840711
    768338 8a3l:Q (3.42) BS01 rna ? GO:0000028 ... P0AG63 36840711
    768339 8a3l:R (3.42) BS01 rna ? GO:0002181 ... P0A7T7 36840711
    768340 8a3l:S (3.42) BS01 rna ? GO:0002181 ... P0A7U3 36840711
    768341 8a3l:T (3.42) BS01 rna ? GO:0000028 ... P0A7U7 36840711
    768342 8a3l:U (3.42) BS01 rna ? GO:0000028 ... P68679 36840711
    768343 8a3l:Y (3.42) BS01 rna ? GO:0000028 ... P0AG67 36840711
    768344 8a3l:c (3.42) BS01 rna ? GO:0000027 ... P60422 36840711
    768345 8a3l:c (3.42) BS02 MG ? GO:0000027 ... P60422 36840711
    768346 8a3l:c (3.42) BS03 MG ? GO:0000027 ... P60422 36840711
    768347 8a3l:d (3.42) BS01 rna ? GO:0000027 ... P60438 36840711
    768348 8a3l:e (3.42) BS01 rna ? GO:0001070 ... P60723 36840711
    768349 8a3l:f (3.42) BS01 rna ? GO:0000027 ... P62399 36840711
    768350 8a3l:f (3.42) BS02 rna ? GO:0000027 ... P62399 36840711
    768351 8a3l:f (3.42) BS03 rna ? GO:0000027 ... P62399 36840711
    768352 8a3l:g (3.42) BS01 rna ? GO:0000027 ... P0AG55 36840711
    768353 8a3l:h (3.42) BS01 rna ? GO:0002181 ... P0A7R1 36840711
    768354 8a3l:i (3.42) BS01 rna ? GO:0002181 ... P0AA10 36840711
    768355 8a3l:j (3.42) BS01 rna ? GO:0002181 ... P0ADY3 36840711
    768356 8a3l:j (3.42) BS02 rna ? GO:0002181 ... P0ADY3 36840711
    768357 8a3l:k (3.42) BS01 rna ? GO:0002181 ... P02413 36840711
    768358 8a3l:l (3.42) BS01 rna ? GO:0000027 ... P0ADY7 36840711
    768359 8a3l:l (3.42) BS02 rna ? GO:0000027 ... P0ADY7 36840711
    768360 8a3l:m (3.42) BS01 rna ? GO:0000027 ... P0AG44 36840711
    768361 8a3l:n (3.42) BS01 rna ? GO:0002181 ... P0C018 36840711
    768362 8a3l:n (3.42) BS02 rna ? GO:0002181 ... P0C018 36840711
    768363 8a3l:o (3.42) BS01 rna ? GO:0000027 ... P0A7K6 36840711
    768364 8a3l:o (3.42) BS02 rna ? GO:0000027 ... P0A7K6 36840711
    768365 8a3l:p (3.42) BS01 rna ? GO:0000027 ... P0A7L3 36840711
    768366 8a3l:q (3.42) BS01 rna ? GO:0002181 ... P0AG48 36840711
    768367 8a3l:r (3.42) BS01 rna ? GO:0002181 ... P61175 36840711
    768368 8a3l:s (3.42) BS01 rna ? GO:0000027 ... P0ADZ0 36840711
    768369 8a3l:t (3.42) BS01 rna ? GO:0000027 ... P60624 36840711
    768370 8a3l:u (3.42) BS01 rna ? GO:0000027 ... P68919 36840711
    768371 8a3l:v (3.42) BS01 rna ? GO:0000027 ... P0A7L8 36840711
    768372 8a3l:v (3.42) BS02 rna ? GO:0000027 ... P0A7L8 36840711
    768373 8a3l:w (3.42) BS01 rna ? GO:0000027 ... P0A7M2 36840711
    768374 8a3l:w (3.42) BS02 rna ? GO:0000027 ... P0A7M2 36840711
    768375 8a3l:x (3.42) BS01 rna ? GO:0000027 ... P0A7M6 36840711
    768376 8a3l:y (3.42) BS01 rna ? GO:0000027 ... P0AG51 36840711
    768377 8a3l:y (3.42) BS02 rna ? GO:0000027 ... P0AG51 36840711
    768378 8a3l:z (3.42) BS01 rna ? GO:0000027 ... P0A7N4 36840711
    768379 8a3n:A (2.0) BS01 NAP 1.3.1.36 GO:0008270 ... W8JWW7 36198083
    768380 8a3n:A (2.0) BS02 ZN 1.3.1.36 GO:0008270 ... W8JWW7 36198083
    768381 8a3n:A (2.0) BS03 ZN 1.3.1.36 GO:0008270 ... W8JWW7 36198083
    768382 8a3n:B (2.0) BS01 NAP 1.3.1.36 GO:0008270 ... W8JWW7 36198083
    768383 8a3n:B (2.0) BS02 ZN 1.3.1.36 GO:0008270 ... W8JWW7 36198083
    768384 8a3n:B (2.0) BS03 ZN 1.3.1.36 GO:0008270 ... W8JWW7 36198083
    768385 8a3t:A (3.5) BS01 peptide ? GO:0005515 ... P53068 N/A
    768386 8a3t:B (3.5) BS01 peptide ? GO:0005515 ... P53197 N/A
    768387 8a3t:U (3.5) BS01 ZN 6.3.2.- GO:0005634 ... Q12157 N/A
    768388 8a3t:U (3.5) BS02 ZN 6.3.2.- GO:0005634 ... Q12157 N/A
    768389 8a3t:U (3.5) BS03 ZN 6.3.2.- GO:0005634 ... Q12157 N/A
    768390 8a3u:A (2.33) BS01 ATP 2.7.13.3 GO:0000155 ... P23222
    Q88JB0
    N/A
    768391 8a3u:A (2.33) BS02 FMN 2.7.13.3 GO:0000155 ... P23222
    Q88JB0
    N/A
    768392 8a3v:A (2.9) BS01 ADP 3.6.4.12 GO:0003677 ... A0A085R2T8 36762863
    768393 8a3v:A (2.9) BS02 MG 3.6.4.12 GO:0003677 ... A0A085R2T8 36762863
    768394 8a3v:B (2.9) BS01 ADP 3.6.4.12 GO:0003677 ... A0A085R2T8 36762863
    768395 8a3v:B (2.9) BS02 ADP 3.6.4.12 GO:0003677 ... A0A085R2T8 36762863
    768396 8a3v:B (2.9) BS03 MG 3.6.4.12 GO:0003677 ... A0A085R2T8 36762863
    768397 8a3w:A (2.89) BS01 rna ? GO:0002181 ... Q4FWX5 N/A
    768398 8a3w:A (2.89) BS02 rna ? GO:0002181 ... Q4FWX5 N/A
    768399 8a3w:A (2.89) BS03 rna ? GO:0002181 ... Q4FWX5 N/A
    768400 8a3w:A (2.89) BS04 rna ? GO:0002181 ... Q4FWX5 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).