SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    769401 8a9t:F (2.304) BS01 ACP N/A GO:0036211 ... N/A 36242921
    769402 8a9v:A (1.984) BS01 LAW 2.7.1.23 GO:0003951 ... Q8Y8D7 36455355
    769403 8a9y:A (3.5) BS01 MG ? N/A Q8A6W3 37286596
    769404 8a9y:I (3.5) BS01 MG ? N/A Q8A6W3 37286596
    769405 8a9z:A (2.294) BS01 GTP 3.6.5.- GO:0000226 ... P81947 36242921
    769406 8a9z:A (2.294) BS02 CA 3.6.5.- GO:0000226 ... P81947 36242921
    769407 8a9z:A (2.294) BS03 LO9 3.6.5.- GO:0000226 ... P81947 36242921
    769408 8a9z:B (2.294) BS01 GDP ? GO:0000226 ... Q6B856 36242921
    769409 8a9z:B (2.294) BS02 LO9 ? GO:0000226 ... Q6B856 36242921
    769410 8a9z:C (2.294) BS01 GTP 3.6.5.- GO:0000226 ... P81947 36242921
    769411 8a9z:C (2.294) BS02 CA 3.6.5.- GO:0000226 ... P81947 36242921
    769412 8a9z:C (2.294) BS03 CA 3.6.5.- GO:0000226 ... P81947 36242921
    769413 8a9z:C (2.294) BS04 LO9 3.6.5.- GO:0000226 ... P81947 36242921
    769414 8a9z:D (2.294) BS01 GDP ? GO:0000226 ... Q6B856 36242921
    769415 8a9z:D (2.294) BS02 LO9 ? GO:0000226 ... Q6B856 36242921
    769416 8a9z:F (2.294) BS01 ACP N/A GO:0036211 ... N/A 36242921
    769417 8aa0:A (3.2) BS01 FRU ? N/A Q8A6W3 37286596
    769418 8aa0:A (3.2) BS02 FRU ? N/A Q8A6W3 37286596
    769419 8aa0:A (3.2) BS03 MG ? N/A Q8A6W3 37286596
    769420 8aa0:B (3.2) BS01 FRU ? GO:0005515 ... Q8A6W4 37286596
    769421 8aa0:B (3.2) BS02 FRU ? GO:0005515 ... Q8A6W4 37286596
    769422 8aa0:B (3.2) BS03 FRU ? GO:0005515 ... Q8A6W4 37286596
    769423 8aa0:B (3.2) BS04 MG ? GO:0005515 ... Q8A6W4 37286596
    769424 8aa0:I (3.2) BS01 FRU ? N/A Q8A6W3 37286596
    769425 8aa0:I (3.2) BS02 FRU ? N/A Q8A6W3 37286596
    769426 8aa0:I (3.2) BS03 MG ? N/A Q8A6W3 37286596
    769427 8aa0:J (3.2) BS01 FRU ? GO:0005515 ... Q8A6W4 37286596
    769428 8aa0:J (3.2) BS02 FRU ? GO:0005515 ... Q8A6W4 37286596
    769429 8aa0:J (3.2) BS03 FRU ? GO:0005515 ... Q8A6W4 37286596
    769430 8aa0:J (3.2) BS04 MG ? GO:0005515 ... Q8A6W4 37286596
    769431 8aa1:A (2.9) BS01 FRU ? N/A Q8A6W3 37286596
    769432 8aa1:A (2.9) BS02 FRU ? N/A Q8A6W3 37286596
    769433 8aa1:A (2.9) BS03 FRU ? N/A Q8A6W3 37286596
    769434 8aa1:A (2.9) BS04 FRU ? N/A Q8A6W3 37286596
    769435 8aa1:A (2.9) BS05 FRU ? N/A Q8A6W3 37286596
    769436 8aa1:A (2.9) BS06 MG ? N/A Q8A6W3 37286596
    769437 8aa1:B (2.9) BS01 FRU ? GO:0005515 ... Q8A6W4 37286596
    769438 8aa1:B (2.9) BS02 FRU ? GO:0005515 ... Q8A6W4 37286596
    769439 8aa1:B (2.9) BS03 FRU ? GO:0005515 ... Q8A6W4 37286596
    769440 8aa1:B (2.9) BS04 FRU ? GO:0005515 ... Q8A6W4 37286596
    769441 8aa1:B (2.9) BS05 MG ? GO:0005515 ... Q8A6W4 37286596
    769442 8aa1:I (2.9) BS01 FRU ? N/A Q8A6W3 37286596
    769443 8aa1:I (2.9) BS02 FRU ? N/A Q8A6W3 37286596
    769444 8aa1:I (2.9) BS03 FRU ? N/A Q8A6W3 37286596
    769445 8aa1:I (2.9) BS04 FRU ? N/A Q8A6W3 37286596
    769446 8aa1:I (2.9) BS05 FRU ? N/A Q8A6W3 37286596
    769447 8aa1:I (2.9) BS06 MG ? N/A Q8A6W3 37286596
    769448 8aa1:J (2.9) BS01 FRU ? GO:0005515 ... Q8A6W4 37286596
    769449 8aa1:J (2.9) BS02 FRU ? GO:0005515 ... Q8A6W4 37286596
    769450 8aa1:J (2.9) BS03 FRU ? GO:0005515 ... Q8A6W4 37286596
    769451 8aa1:J (2.9) BS04 FRU ? GO:0005515 ... Q8A6W4 37286596
    769452 8aa1:J (2.9) BS05 MG ? GO:0005515 ... Q8A6W4 37286596
    769453 8aa2:A (3.1) BS01 FRU ? N/A Q8A6W3 37286596
    769454 8aa2:A (3.1) BS02 FRU ? N/A Q8A6W3 37286596
    769455 8aa2:A (3.1) BS03 FRU ? N/A Q8A6W3 37286596
    769456 8aa2:A (3.1) BS04 MG ? N/A Q8A6W3 37286596
    769457 8aa2:B (3.1) BS01 FRU ? GO:0005515 ... Q8A6W4 37286596
    769458 8aa2:B (3.1) BS02 FRU ? GO:0005515 ... Q8A6W4 37286596
    769459 8aa2:B (3.1) BS03 FRU ? GO:0005515 ... Q8A6W4 37286596
    769460 8aa2:B (3.1) BS04 MG ? GO:0005515 ... Q8A6W4 37286596
    769461 8aa2:E (3.1) BS01 FRU 3.2.1.26 GO:0004553 ... Q8A6W6 37286596
    769462 8aa2:E (3.1) BS02 FRU 3.2.1.26 GO:0004553 ... Q8A6W6 37286596
    769463 8aa2:E (3.1) BS03 FRU 3.2.1.26 GO:0004553 ... Q8A6W6 37286596
    769464 8aa2:E (3.1) BS04 FRU 3.2.1.26 GO:0004553 ... Q8A6W6 37286596
    769465 8aa2:E (3.1) BS05 FRU 3.2.1.26 GO:0004553 ... Q8A6W6 37286596
    769466 8aa2:E (3.1) BS06 FRU 3.2.1.26 GO:0004553 ... Q8A6W6 37286596
    769467 8aa2:E (3.1) BS07 FRU 3.2.1.26 GO:0004553 ... Q8A6W6 37286596
    769468 8aa2:E (3.1) BS08 FRU 3.2.1.26 GO:0004553 ... Q8A6W6 37286596
    769469 8aa2:G (3.1) BS01 FRU ? N/A Q8A6W5 37286596
    769470 8aa2:G (3.1) BS02 FRU ? N/A Q8A6W5 37286596
    769471 8aa2:I (3.1) BS01 FRU ? N/A Q8A6W3 37286596
    769472 8aa2:I (3.1) BS02 FRU ? N/A Q8A6W3 37286596
    769473 8aa2:I (3.1) BS03 FRU ? N/A Q8A6W3 37286596
    769474 8aa2:I (3.1) BS04 FRU ? N/A Q8A6W3 37286596
    769475 8aa2:I (3.1) BS05 MG ? N/A Q8A6W3 37286596
    769476 8aa2:J (3.1) BS01 FRU ? GO:0005515 ... Q8A6W4 37286596
    769477 8aa2:J (3.1) BS02 FRU ? GO:0005515 ... Q8A6W4 37286596
    769478 8aa2:J (3.1) BS03 FRU ? GO:0005515 ... Q8A6W4 37286596
    769479 8aa2:J (3.1) BS04 MG ? GO:0005515 ... Q8A6W4 37286596
    769480 8aa2:M (3.1) BS01 FRU 3.2.1.26 GO:0004553 ... Q8A6W6 37286596
    769481 8aa2:M (3.1) BS02 FRU 3.2.1.26 GO:0004553 ... Q8A6W6 37286596
    769482 8aa2:M (3.1) BS03 FRU 3.2.1.26 GO:0004553 ... Q8A6W6 37286596
    769483 8aa2:M (3.1) BS04 FRU 3.2.1.26 GO:0004553 ... Q8A6W6 37286596
    769484 8aa2:M (3.1) BS05 FRU 3.2.1.26 GO:0004553 ... Q8A6W6 37286596
    769485 8aa3:A (2.7) BS01 FRU ? N/A Q8A6W3 37286596
    769486 8aa3:A (2.7) BS02 FRU ? N/A Q8A6W3 37286596
    769487 8aa3:A (2.7) BS03 FRU ? N/A Q8A6W3 37286596
    769488 8aa3:A (2.7) BS04 FRU ? N/A Q8A6W3 37286596
    769489 8aa3:A (2.7) BS05 MG ? N/A Q8A6W3 37286596
    769490 8aa3:B (2.7) BS01 FRU ? GO:0005515 ... Q8A6W4 37286596
    769491 8aa3:B (2.7) BS02 FRU ? GO:0005515 ... Q8A6W4 37286596
    769492 8aa3:B (2.7) BS03 FRU ? GO:0005515 ... Q8A6W4 37286596
    769493 8aa3:B (2.7) BS04 MG ? GO:0005515 ... Q8A6W4 37286596
    769494 8aa3:I (2.7) BS01 FRU ? N/A Q8A6W3 37286596
    769495 8aa3:I (2.7) BS02 FRU ? N/A Q8A6W3 37286596
    769496 8aa3:I (2.7) BS03 FRU ? N/A Q8A6W3 37286596
    769497 8aa3:I (2.7) BS04 MG ? N/A Q8A6W3 37286596
    769498 8aa3:J (2.7) BS01 FRU ? GO:0005515 ... Q8A6W4 37286596
    769499 8aa3:J (2.7) BS02 FRU ? GO:0005515 ... Q8A6W4 37286596
    769500 8aa3:J (2.7) BS03 FRU ? GO:0005515 ... Q8A6W4 37286596
    769501 8aa3:J (2.7) BS04 MG ? GO:0005515 ... Q8A6W4 37286596
    769502 8aa5:AP1 (2.46) BS01 dna N/A GO:0003676 ... N/A 36184667
    769503 8aa5:AP1 (2.46) BS02 dna N/A GO:0003676 ... N/A 36184667
    769504 8aa5:AP1 (2.46) BS03 dna N/A GO:0003676 ... N/A 36184667
    769505 8aa5:AP1 (2.46) BS04 dna N/A GO:0003676 ... N/A 36184667
    769506 8aa5:AP1 (2.46) BS05 dna N/A GO:0003676 ... N/A 36184667
    769507 8aa5:BP1 (2.46) BS01 dna N/A GO:0003676 ... N/A 36184667
    769508 8aa5:BP1 (2.46) BS02 dna N/A GO:0003676 ... N/A 36184667
    769509 8aa5:BP1 (2.46) BS03 dna N/A GO:0003676 ... N/A 36184667
    769510 8aa5:BP1 (2.46) BS04 dna N/A GO:0003676 ... N/A 36184667
    769511 8aa5:BP1 (2.46) BS05 dna N/A GO:0003676 ... N/A 36184667
    769512 8aa5:CP1 (2.46) BS01 dna N/A GO:0003676 ... N/A 36184667
    769513 8aa5:CP1 (2.46) BS02 dna N/A GO:0003676 ... N/A 36184667
    769514 8aa5:DP1 (2.46) BS01 dna N/A GO:0003676 ... N/A 36184667
    769515 8aa5:DP1 (2.46) BS02 dna N/A GO:0003676 ... N/A 36184667
    769516 8aa6:A (1.15) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 36594655
    769517 8aa6:A (1.15) BS02 LD3 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 36594655
    769518 8aa7:A (2.05) BS01 WYH 1.14.-.- GO:0004497 ... A0A380DQV1 N/A
    769519 8aa7:A (2.05) BS02 HEM 1.14.-.- GO:0004497 ... A0A380DQV1 N/A
    769520 8aaa:A (1.9) BS01 peptide ? N/A P0DTC2 37328472
    769521 8aae:A (1.15) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 36594655
    769522 8aae:A (1.15) BS02 P8B 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 36594655
    769523 8aaf:0 (2.5) BS01 rna ? GO:0000027 ... P05317 36804914
    769524 8aaf:A (2.5) BS01 rna ? GO:0000470 ... P05748 36804914
    769525 8aaf:A (2.5) BS02 rna ? GO:0000470 ... P05748 36804914
    769526 8aaf:B (2.5) BS01 rna ? GO:0000470 ... P26784 36804914
    769527 8aaf:C (2.5) BS01 rna ? GO:0000448 ... P05740 36804914
    769528 8aaf:C (2.5) BS02 rna ? GO:0000448 ... P05740 36804914
    769529 8aaf:D (2.5) BS01 rna ? GO:0002181 ... P0CX49 36804914
    769530 8aaf:E (2.5) BS01 rna ? GO:0002181 ... P0CX82 36804914
    769531 8aaf:F (2.5) BS01 rna ? GO:0002181 ... P0CX23 36804914
    769532 8aaf:F (2.5) BS02 rna ? GO:0002181 ... P0CX23 36804914
    769533 8aaf:G (2.5) BS01 rna ? GO:0002181 ... Q02753 36804914
    769534 8aaf:G (2.5) BS02 rna ? GO:0002181 ... Q02753 36804914
    769535 8aaf:H (2.5) BS01 rna ? GO:0002181 ... P05749 36804914
    769536 8aaf:I (2.5) BS01 rna ? GO:0002181 ... P0CX41 36804914
    769537 8aaf:J (2.5) BS01 rna ? GO:0002181 ... P04449 36804914
    769538 8aaf:K (2.5) BS01 rna ? GO:0000027 ... P04456 36804914
    769539 8aaf:K (2.5) BS02 rna ? GO:0000027 ... P04456 36804914
    769540 8aaf:L (2.5) BS01 rna ? GO:0002181 ... P05743 36804914
    769541 8aaf:L (2.5) BS02 rna ? GO:0002181 ... P05743 36804914
    769542 8aaf:M (2.5) BS01 rna ? GO:0002181 ... P0C2H6 36804914
    769543 8aaf:N (2.5) BS01 rna ? GO:0002181 ... P02406 36804914
    769544 8aaf:O (2.5) BS01 rna ? GO:0002181 ... P05747 36804914
    769545 8aaf:P (2.5) BS01 rna ? GO:0002181 ... P14120 36804914
    769546 8aaf:Q (2.5) BS01 rna ? GO:0002181 ... P0C2H8 36804914
    769547 8aaf:R (2.5) BS01 rna ? GO:0002181 ... P38061 36804914
    769548 8aaf:R (2.5) BS02 MG ? GO:0002181 ... P38061 36804914
    769549 8aaf:S (2.5) BS01 rna ? GO:0000027 ... P05744 36804914
    769550 8aaf:T (2.5) BS01 rna ? GO:0002181 ... P87262 36804914
    769551 8aaf:T (2.5) BS02 ZN ? GO:0002181 ... P87262 36804914
    769552 8aaf:U (2.5) BS01 rna ? GO:0000463 ... P0CX84 36804914
    769553 8aaf:U (2.5) BS02 rna ? GO:0000463 ... P0CX84 36804914
    769554 8aaf:V (2.5) BS01 rna ? GO:0000470 ... P05745 36804914
    769555 8aaf:W (2.5) BS01 rna ? GO:0000448 ... P49166 36804914
    769556 8aaf:W (2.5) BS02 rna ? GO:0000448 ... P49166 36804914
    769557 8aaf:W (2.5) BS03 ZN ? GO:0000448 ... P49166 36804914
    769558 8aaf:X (2.5) BS01 rna ? GO:0002181 ... P49167 36804914
    769559 8aaf:Y (2.5) BS01 rna ? GO:0002181 ... P04650 36804914
    769560 8aaf:Y (2.5) BS02 rna ? GO:0002181 ... P04650 36804914
    769561 8aaf:Z (2.5) BS01 rna ? GO:0000027 ... P0CH08 36804914
    769562 8aaf:Z (2.5) BS02 ZN ? GO:0000027 ... P0CH08 36804914
    769563 8aaf:a (2.5) BS01 rna ? GO:0000049 ... Q12532 36804914
    769564 8aaf:a (2.5) BS02 rna ? GO:0000049 ... Q12532 36804914
    769565 8aaf:a (2.5) BS03 rna ? GO:0000049 ... Q12532 36804914
    769566 8aaf:b (2.5) BS01 rna ? GO:0002181 ... P0CX27 36804914
    769567 8aaf:b (2.5) BS02 ZN ? GO:0002181 ... P0CX27 36804914
    769568 8aaf:c (2.5) BS01 rna ? GO:0002181 ... P0CX25 36804914
    769569 8aaf:c (2.5) BS02 ZN ? GO:0002181 ... P0CX25 36804914
    769570 8aaf:e (2.5) BS01 rna 2.3.2.27 GO:0000781 ... Q04781 36804914
    769571 8aaf:e (2.5) BS02 ZN 2.3.2.27 GO:0000781 ... Q04781 36804914
    769572 8aaf:e (2.5) BS03 ZN 2.3.2.27 GO:0000781 ... Q04781 36804914
    769573 8aaf:g (2.5) BS01 rna ? GO:0000054 ... Q12522 36804914
    769574 8aaf:j (2.5) BS01 rna ? GO:0002181 ... P0CX45 36804914
    769575 8aaf:j (2.5) BS02 MG ? GO:0002181 ... P0CX45 36804914
    769576 8aaf:k (2.5) BS01 rna ? GO:0000027 ... P14126 36804914
    769577 8aaf:k (2.5) BS02 MG ? GO:0000027 ... P14126 36804914
    769578 8aaf:l (2.5) BS01 rna ? GO:0002181 ... P10664 36804914
    769579 8aaf:l (2.5) BS02 rna ? GO:0002181 ... P10664 36804914
    769580 8aaf:m (2.5) BS01 rna ? GO:0000027 ... P26321 36804914
    769581 8aaf:m (2.5) BS02 rna ? GO:0000027 ... P26321 36804914
    769582 8aaf:n (2.5) BS01 rna ? GO:0000027 ... P05739 36804914
    769583 8aaf:o (2.5) BS01 rna ? GO:0000463 ... P05737 36804914
    769584 8aaf:o (2.5) BS02 rna ? GO:0000463 ... P05737 36804914
    769585 8aaf:p (2.5) BS01 rna ? GO:0000470 ... P17076 36804914
    769586 8aaf:p (2.5) BS02 rna ? GO:0000470 ... P17076 36804914
    769587 8aaf:q (2.5) BS01 rna ? GO:0002181 ... P05738 36804914
    769588 8aaf:r (2.5) BS01 rna ? GO:0000027 ... P41805 36804914
    769589 8aaf:r (2.5) BS02 rna ? GO:0000027 ... P41805 36804914
    769590 8aaf:r (2.5) BS03 rna ? GO:0000027 ... P41805 36804914
    769591 8aaf:s (2.5) BS01 rna ? GO:0000027 ... P0C0W9 36804914
    769592 8aaf:s (2.5) BS02 rna ? GO:0000027 ... P0C0W9 36804914
    769593 8aaf:s (2.5) BS03 rna ? GO:0000027 ... P0C0W9 36804914
    769594 8aaf:t (2.5) BS01 rna ? GO:0002181 ... Q12690 36804914
    769595 8aaf:t (2.5) BS02 rna ? GO:0002181 ... Q12690 36804914
    769596 8aaf:u (2.5) BS01 rna ? GO:0000027 ... P36105 36804914
    769597 8aaf:v (2.5) BS01 rna ? GO:0002182 ... P23301 36804914
    769598 8aaf:w (2.5) BS01 rna ? GO:0000055 ... P0CX43 36804914
    769599 8aaf:z (2.5) BS01 rna ? GO:0000027 ... P0CX53 36804914
    769600 8aag:A (10.0) BS01 dna ? GO:0000786 ... Q71DI3 36610392

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).