SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    769401 8asp:k (2.9) BS02 CLA ? GO:0009522 ... P72712 37542031
    769402 8asp:k (2.9) BS03 CLA ? GO:0009522 ... P72712 37542031
    769403 8asp:k (2.9) BS04 CLA ? GO:0009522 ... P72712 37542031
    769404 8asp:k (2.9) BS05 CLA ? GO:0009522 ... P72712 37542031
    769405 8asp:k (2.9) BS06 CLA ? GO:0009522 ... P72712 37542031
    769406 8asp:l (2.9) BS01 CLA ? GO:0005886 ... P37277 37542031
    769407 8asp:l (2.9) BS02 CLA ? GO:0005886 ... P37277 37542031
    769408 8asp:l (2.9) BS03 CLA ? GO:0005886 ... P37277 37542031
    769409 8asp:l (2.9) BS04 EQ3 ? GO:0005886 ... P37277 37542031
    769410 8asp:l (2.9) BS05 CLA ? GO:0005886 ... P37277 37542031
    769411 8asp:l (2.9) BS06 CLA ? GO:0005886 ... P37277 37542031
    769412 8asp:l (2.9) BS07 CLA ? GO:0005886 ... P37277 37542031
    769413 8asp:m (2.9) BS01 CLA ? GO:0009522 ... P72986 37542031
    769414 8asp:m (2.9) BS02 ECH ? GO:0009522 ... P72986 37542031
    769415 8ass:A (2.12) BS01 BTN N/A GO:0009374 ... N/A 36853192
    769416 8ass:B (2.12) BS01 BTN N/A GO:0009374 ... N/A 36853192
    769417 8ass:C (2.12) BS01 BTN N/A GO:0009374 ... N/A 36853192
    769418 8ass:D (2.12) BS01 BTN N/A GO:0009374 ... N/A 36853192
    769419 8asu:A (2.52) BS01 BTN N/A GO:0009374 ... N/A 36853192
    769420 8asu:B (2.52) BS01 BTN N/A GO:0009374 ... N/A 36853192
    769421 8asu:C (2.52) BS01 BTN N/A GO:0009374 ... N/A 36853192
    769422 8asu:D (2.52) BS01 BTN N/A GO:0009374 ... N/A 36853192
    769423 8asv:C (4.35) BS01 SF4 2.3.1.311 GO:0000049 ... Q02908 36617428
    769424 8asw:A (3.96) BS01 rna ? GO:0000049 ... Q06706 36617428
    769425 8asw:C (3.96) BS01 rna 2.3.1.311 GO:0000049 ... Q02908 36617428
    769426 8asw:C (3.96) BS02 SF4 2.3.1.311 GO:0000049 ... Q02908 36617428
    769427 8asz:A (1.28) BS01 AG2 ? GO:0015846 ... P31133 N/A
    769428 8asz:A (1.28) BS02 CA ? GO:0015846 ... P31133 N/A
    769429 8at0:A (2.0) BS01 ONT ? GO:0015846 ... P31133 N/A
    769430 8at0:A (2.0) BS02 JFN ? GO:0015846 ... P31133 N/A
    769431 8at0:A (2.0) BS03 JFN ? GO:0015846 ... P31133 N/A
    769432 8at0:A (2.0) BS04 JFN ? GO:0015846 ... P31133 N/A
    769433 8at0:B (2.0) BS01 ONT ? GO:0015846 ... P31133 N/A
    769434 8at1:A (2.8) BS01 GLC 2.1.3.2 GO:0004070 ... P0A786 2271529
    769435 8at1:A (2.8) BS02 PCT 2.1.3.2 GO:0004070 ... P0A786 2271529
    769436 8at1:B (2.8) BS01 ZN ? GO:0005515 ... P0A7F3 2271529
    769437 8at1:B (2.8) BS02 CTP ? GO:0005515 ... P0A7F3 2271529
    769438 8at1:C (2.8) BS01 GLC 2.1.3.2 GO:0004070 ... P0A786 2271529
    769439 8at1:C (2.8) BS02 PCT 2.1.3.2 GO:0004070 ... P0A786 2271529
    769440 8at1:D (2.8) BS01 ZN ? GO:0005515 ... P0A7F3 2271529
    769441 8at1:D (2.8) BS02 CTP ? GO:0005515 ... P0A7F3 2271529
    769442 8at8:A (1.51) BS01 HT9 4.99.1.9 GO:0004325 ... Q8Y565 36479958
    769443 8at9:A (1.4) BS01 peptide ? GO:0000122 ... P31947 37676236
    769444 8at9:A (1.4) BS02 NUO ? GO:0000122 ... P31947 37676236
    769445 8atb:AAA (2.35) BS01 O0H 2.7.11.1 GO:0000287 ... Q9NWZ3 38228402
    769446 8atb:BBB (2.35) BS01 O0H 2.7.11.1 GO:0000287 ... Q9NWZ3 38228402
    769447 8atc:A (2.5) BS01 PAL 2.1.3.2 GO:0004070 ... P0A786 3066911
    769448 8atc:B (2.5) BS01 ZN ? GO:0005515 ... P0A7F3 3066911
    769449 8atc:C (2.5) BS01 PAL 2.1.3.2 GO:0004070 ... P0A786 3066911
    769450 8atc:D (2.5) BS01 ZN ? GO:0005515 ... P0A7F3 3066911
    769451 8ate:A (1.92) BS01 FAD ? GO:0000166 ... V4TNJ4 N/A
    769452 8atf:G (3.45) BS01 dna N/A GO:0003677 ... N/A 36490333
    769453 8atf:G (3.45) BS02 dna N/A GO:0003677 ... N/A 36490333
    769454 8atf:G (3.45) BS03 ADP N/A GO:0003677 ... N/A 36490333
    769455 8atf:M (3.45) BS01 dna ? GO:0000786 ... Q71DI3 36490333
    769456 8atf:M (3.45) BS02 dna ? GO:0000786 ... Q71DI3 36490333
    769457 8atf:N (3.45) BS01 dna ? GO:0000781 ... P62805 36490333
    769458 8atf:N (3.45) BS02 dna ? GO:0000781 ... P62805 36490333
    769459 8atf:O (3.45) BS01 dna ? GO:0000786 ... P0C0S8 36490333
    769460 8atf:O (3.45) BS02 dna ? GO:0000786 ... P0C0S8 36490333
    769461 8atf:P (3.45) BS01 dna ? GO:0000786 ... P62807 36490333
    769462 8atf:P (3.45) BS02 dna ? GO:0000786 ... P62807 36490333
    769463 8atf:Q (3.45) BS01 dna ? GO:0000786 ... Q71DI3 36490333
    769464 8atf:Q (3.45) BS02 dna ? GO:0000786 ... Q71DI3 36490333
    769465 8atf:R (3.45) BS01 dna ? GO:0000781 ... P62805 36490333
    769466 8atf:R (3.45) BS02 dna ? GO:0000781 ... P62805 36490333
    769467 8atf:S (3.45) BS01 dna ? GO:0000786 ... P0C0S8 36490333
    769468 8atf:S (3.45) BS02 dna ? GO:0000786 ... P0C0S8 36490333
    769469 8atf:T (3.45) BS01 dna ? GO:0000786 ... P62807 36490333
    769470 8ati:A (2.6) BS01 peptide ? GO:0003714 ... P56545 N/A
    769471 8ati:A (2.6) BS02 NAD ? GO:0003714 ... P56545 N/A
    769472 8ati:B (2.6) BS01 peptide ? GO:0003714 ... P56545 N/A
    769473 8ati:B (2.6) BS02 NAD ? GO:0003714 ... P56545 N/A
    769474 8ati:C (2.6) BS01 peptide ? GO:0003714 ... P56545 N/A
    769475 8ati:C (2.6) BS02 NAD ? GO:0003714 ... P56545 N/A
    769476 8ati:D (2.6) BS01 NAD ? GO:0003714 ... P56545 N/A
    769477 8atj:AAA (2.117) BS01 ZN ? N/A Q9UPX8 36450866
    769478 8atl:AAA (2.464) BS01 O6X 2.7.11.1 GO:0000287 ... Q9NWZ3 38228402
    769479 8atl:BBB (2.464) BS01 O6X 2.7.11.1 GO:0000287 ... Q9NWZ3 38228402
    769480 8atn:AAA (2.171) BS01 O06 2.7.11.1 GO:0000287 ... Q9NWZ3 38228402
    769481 8atn:BBB (2.171) BS01 O06 2.7.11.1 GO:0000287 ... Q9NWZ3 38228402
    769482 8atp:A (1.4) BS01 peptide ? GO:0000122 ... P31947 37676236
    769483 8atp:A (1.4) BS02 O0O ? GO:0000122 ... P31947 37676236
    769484 8atr:A (1.7) BS01 peptide ? GO:0000122 ... P31947 37676236
    769485 8atr:A (1.7) BS02 O6L ? GO:0000122 ... P31947 37676236
    769486 8ats:A (1.4) BS01 peptide ? GO:0000122 ... P31947 37676236
    769487 8ats:A (1.4) BS02 O5I ? GO:0000122 ... P31947 37676236
    769488 8att:A (3.44) BS01 dna 2.7.7.6 GO:0000002 ... P13433 37821701
    769489 8att:A (3.44) BS02 dna 2.7.7.6 GO:0000002 ... P13433 37821701
    769490 8att:A (3.44) BS03 rna 2.7.7.6 GO:0000002 ... P13433 37821701
    769491 8att:B (3.44) BS01 dna 2.1.1.- GO:0003677 ... P14908 37821701
    769492 8att:B (3.44) BS02 dna 2.1.1.- GO:0003677 ... P14908 37821701
    769493 8att:B (3.44) BS03 GTP 2.1.1.- GO:0003677 ... P14908 37821701
    769494 8atu:A (3.3) BS01 ZN 2.3.2.27 GO:0000922 ... Q9NR09 36758105
    769495 8atu:B (3.3) BS01 ZN 2.3.2.27 GO:0000922 ... Q9NR09 36758105
    769496 8atv:A (3.39) BS01 dna 2.7.7.6 GO:0000002 ... P13433 37821701
    769497 8atv:A (3.39) BS02 dna 2.7.7.6 GO:0000002 ... P13433 37821701
    769498 8atv:A (3.39) BS03 rna 2.7.7.6 GO:0000002 ... P13433 37821701
    769499 8atv:B (3.39) BS01 dna 2.1.1.- GO:0003677 ... P14908 37821701
    769500 8atv:B (3.39) BS02 dna 2.1.1.- GO:0003677 ... P14908 37821701
    769501 8atw:A (3.62) BS01 dna 2.7.7.6 GO:0000002 ... P13433 37821701
    769502 8atw:A (3.62) BS02 dna 2.7.7.6 GO:0000002 ... P13433 37821701
    769503 8atw:A (3.62) BS03 rna 2.7.7.6 GO:0000002 ... P13433 37821701
    769504 8atw:B (3.62) BS01 dna 2.1.1.- GO:0003677 ... P14908 37821701
    769505 8atw:B (3.62) BS02 dna 2.1.1.- GO:0003677 ... P14908 37821701
    769506 8atx:A (7.0) BS01 ZN 2.3.2.27 GO:0000922 ... Q9NR09 36758105
    769507 8atx:B (7.0) BS01 ZN 2.3.2.27 GO:0000922 ... Q9NR09 36758105
    769508 8aty:A (1.9) BS01 O7O ? GO:0003677 ... P37231 37385602
    769509 8aty:A (1.9) BS02 O7O ? GO:0003677 ... P37231 37385602
    769510 8atz:A (1.95) BS01 O86 ? GO:0003677 ... P37231 37385602
    769511 8au2:A (1.6) BS01 peptide ? GO:0000122 ... P31947 37676236
    769512 8au2:A (1.6) BS02 O3O ? GO:0000122 ... P31947 37676236
    769513 8au3:A (2.26) BS01 3E8 2.7.10.1 GO:0004672 ... P08581 37806493
    769514 8au3:B (2.26) BS01 3E8 2.7.10.1 GO:0004672 ... P08581 37806493
    769515 8au5:A (2.72) BS01 3E8 2.7.10.1 GO:0004672 ... P08581 37806493
    769516 8au6:A (2.0) BS01 CA ? GO:0016020 ... Q8NQL8 36469781
    769517 8au8:A (1.58) BS01 FMN ? GO:0000166 ... Q9R9V9 36846821
    769518 8au8:A (1.58) BS02 O8I ? GO:0000166 ... Q9R9V9 36846821
    769519 8au8:A (1.58) BS03 O8I ? GO:0000166 ... Q9R9V9 36846821
    769520 8au8:B (1.58) BS01 FMN ? GO:0000166 ... Q9R9V9 36846821
    769521 8au8:B (1.58) BS02 O8I ? GO:0000166 ... Q9R9V9 36846821
    769522 8au9:A (1.5) BS01 FMN ? GO:0000166 ... Q9R9V9 36846821
    769523 8au9:A (1.5) BS02 O8R ? GO:0000166 ... Q9R9V9 36846821
    769524 8au9:B (1.5) BS01 FMN ? GO:0000166 ... Q9R9V9 36846821
    769525 8au9:B (1.5) BS02 O8R ? GO:0000166 ... Q9R9V9 36846821
    769526 8aua:A (1.9) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769527 8aua:A (1.9) BS02 L9I 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769528 8aua:B (1.9) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769529 8aua:B (1.9) BS02 L9I 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769530 8aub:A (1.62) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769531 8aub:A (1.62) BS02 O8I 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769532 8aub:B (1.62) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769533 8aub:B (1.62) BS02 O8I 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769534 8aue:A (1.82) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769535 8aue:A (1.82) BS02 O8R 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769536 8aue:A (1.82) BS03 GLY 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769537 8aue:B (1.82) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769538 8aue:B (1.82) BS02 O8R 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769539 8aue:B (1.82) BS03 GLY 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769540 8auf:A (1.35) BS01 O8I ? GO:0000166 ... Q9R9V9 36846821
    769541 8auf:A (1.35) BS02 FMN ? GO:0000166 ... Q9R9V9 36846821
    769542 8auf:A (1.35) BS03 O8I ? GO:0000166 ... Q9R9V9 36846821
    769543 8auf:B (1.35) BS01 FMN ? GO:0000166 ... Q9R9V9 36846821
    769544 8auf:B (1.35) BS02 O8I ? GO:0000166 ... Q9R9V9 36846821
    769545 8aug:A (1.35) BS01 L9I ? GO:0000166 ... Q9R9V9 36846821
    769546 8aug:A (1.35) BS02 FMN ? GO:0000166 ... Q9R9V9 36846821
    769547 8aug:A (1.35) BS03 L9I ? GO:0000166 ... Q9R9V9 36846821
    769548 8aug:A (1.35) BS04 L9I ? GO:0000166 ... Q9R9V9 36846821
    769549 8aug:A (1.35) BS05 L9I ? GO:0000166 ... Q9R9V9 36846821
    769550 8aug:B (1.35) BS01 L9I ? GO:0000166 ... Q9R9V9 36846821
    769551 8aug:B (1.35) BS02 L9I ? GO:0000166 ... Q9R9V9 36846821
    769552 8aug:B (1.35) BS03 FMN ? GO:0000166 ... Q9R9V9 36846821
    769553 8aug:B (1.35) BS04 L9I ? GO:0000166 ... Q9R9V9 36846821
    769554 8aug:B (1.35) BS05 L9I ? GO:0000166 ... Q9R9V9 36846821
    769555 8aug:B (1.35) BS06 L9I ? GO:0000166 ... Q9R9V9 36846821
    769556 8auh:A (1.35) BS01 FMN ? GO:0000166 ... Q9R9V9 36846821
    769557 8auh:A (1.35) BS02 L9I ? GO:0000166 ... Q9R9V9 36846821
    769558 8auh:B (1.35) BS01 FMN ? GO:0000166 ... Q9R9V9 36846821
    769559 8auh:B (1.35) BS02 L9I ? GO:0000166 ... Q9R9V9 36846821
    769560 8aui:A (1.54) BS01 FMN ? GO:0000166 ... Q9R9V9 36846821
    769561 8aui:A (1.54) BS02 O8R ? GO:0000166 ... Q9R9V9 36846821
    769562 8aui:A (1.54) BS03 O8R ? GO:0000166 ... Q9R9V9 36846821
    769563 8aui:A (1.54) BS04 O8R ? GO:0000166 ... Q9R9V9 36846821
    769564 8aui:A (1.54) BS05 O8R ? GO:0000166 ... Q9R9V9 36846821
    769565 8aui:B (1.54) BS01 O8R ? GO:0000166 ... Q9R9V9 36846821
    769566 8aui:B (1.54) BS02 O8R ? GO:0000166 ... Q9R9V9 36846821
    769567 8aui:B (1.54) BS03 FMN ? GO:0000166 ... Q9R9V9 36846821
    769568 8aui:B (1.54) BS04 O8R ? GO:0000166 ... Q9R9V9 36846821
    769569 8aui:B (1.54) BS05 O8R ? GO:0000166 ... Q9R9V9 36846821
    769570 8auj:A (1.57) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769571 8auj:A (1.57) BS02 L9I 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769572 8auj:B (1.57) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769573 8auj:B (1.57) BS02 L9I 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769574 8auk:A (6.2) BS01 ZN 2.3.2.27 GO:0000922 ... Q9NR09 36758105
    769575 8auk:B (6.2) BS01 ZN 2.3.2.27 GO:0000922 ... Q9NR09 36758105
    769576 8aul:A (1.5) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769577 8aul:A (1.5) BS02 O8R 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769578 8aul:B (1.5) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769579 8aul:B (1.5) BS02 O8R 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769580 8aum:A (1.35) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769581 8aum:A (1.35) BS02 O8I 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769582 8aum:B (1.35) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769583 8aum:B (1.35) BS02 O8I 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769584 8aun:A (1.49) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769585 8aun:A (1.49) BS02 L9I 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769586 8aun:B (1.49) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769587 8aun:B (1.49) BS02 L9I 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769588 8auo:A (1.58) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769589 8auo:A (1.58) BS02 O8R 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769590 8auo:B (1.58) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769591 8auo:B (1.58) BS02 O8R 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769592 8aup:A (2.17) BS01 MN 3.5.3.1 GO:0000050 ... P05089 36939275
    769593 8aup:A (2.17) BS02 MN 3.5.3.1 GO:0000050 ... P05089 36939275
    769594 8aup:A (2.17) BS03 O93 3.5.3.1 GO:0000050 ... P05089 36939275
    769595 8aup:B (2.17) BS01 MN 3.5.3.1 GO:0000050 ... P05089 36939275
    769596 8aup:B (2.17) BS02 MN 3.5.3.1 GO:0000050 ... P05089 36939275
    769597 8aup:B (2.17) BS03 O93 3.5.3.1 GO:0000050 ... P05089 36939275
    769598 8aup:C (2.17) BS01 MN 3.5.3.1 GO:0000050 ... P05089 36939275
    769599 8aup:C (2.17) BS02 MN 3.5.3.1 GO:0000050 ... P05089 36939275
    769600 8aup:C (2.17) BS03 O93 3.5.3.1 GO:0000050 ... P05089 36939275

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).