SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    769601 8aup:D (2.17) BS01 MN 3.5.3.1 GO:0000050 ... P05089 36939275
    769602 8aup:D (2.17) BS02 MN 3.5.3.1 GO:0000050 ... P05089 36939275
    769603 8aup:D (2.17) BS03 O93 3.5.3.1 GO:0000050 ... P05089 36939275
    769604 8aup:E (2.17) BS01 MN 3.5.3.1 GO:0000050 ... P05089 36939275
    769605 8aup:E (2.17) BS02 MN 3.5.3.1 GO:0000050 ... P05089 36939275
    769606 8aup:E (2.17) BS03 O93 3.5.3.1 GO:0000050 ... P05089 36939275
    769607 8aup:F (2.17) BS01 MN 3.5.3.1 GO:0000050 ... P05089 36939275
    769608 8aup:F (2.17) BS02 MN 3.5.3.1 GO:0000050 ... P05089 36939275
    769609 8aup:F (2.17) BS03 O93 3.5.3.1 GO:0000050 ... P05089 36939275
    769610 8auq:A (1.42) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769611 8auq:A (1.42) BS02 O8I 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769612 8auq:B (1.42) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769613 8auq:B (1.42) BS02 O8I 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    769614 8aus:A (1.4) BS01 peptide ? GO:0000122 ... P31947 37676236
    769615 8aus:A (1.4) BS02 O3F ? GO:0000122 ... P31947 37676236
    769616 8aut:A (2.685) BS01 ZN ? GO:0046872 ... A0A075X7C6 N/A
    769617 8aut:A (2.685) BS02 AKG ? GO:0046872 ... A0A075X7C6 N/A
    769618 8aut:A (2.685) BS03 OAU ? GO:0046872 ... A0A075X7C6 N/A
    769619 8aut:B (2.685) BS01 ZN ? GO:0046872 ... A0A075X7C6 N/A
    769620 8aut:B (2.685) BS02 AKG ? GO:0046872 ... A0A075X7C6 N/A
    769621 8aut:B (2.685) BS03 OAU ? GO:0046872 ... A0A075X7C6 N/A
    769622 8aut:C (2.685) BS01 ZN ? GO:0046872 ... A0A075X7C6 N/A
    769623 8aut:C (2.685) BS02 AKG ? GO:0046872 ... A0A075X7C6 N/A
    769624 8aut:C (2.685) BS03 OAU ? GO:0046872 ... A0A075X7C6 N/A
    769625 8aut:D (2.685) BS01 ZN ? GO:0046872 ... A0A075X7C6 N/A
    769626 8aut:D (2.685) BS02 AKG ? GO:0046872 ... A0A075X7C6 N/A
    769627 8aut:D (2.685) BS03 OAU ? GO:0046872 ... A0A075X7C6 N/A
    769628 8auu:A (0.95) BS01 NAP 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 N/A
    769629 8auu:A (0.95) BS02 30L 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 N/A
    769630 8auv:A (2.38) BS01 rna ? GO:0003723 ... A0A1S4DQ51 37156858
    769631 8auv:C (2.38) BS01 rna ? GO:0003735 ... A0A1S4B129 37156858
    769632 8auv:D (2.38) BS01 rna ? GO:0003735 ... A0A1S3Z9G2 37156858
    769633 8auv:E (2.38) BS01 rna ? GO:0000028 ... A0A1S3Y949 37156858
    769634 8auv:F (2.38) BS01 rna ? GO:0003735 ... Q285L8 37156858
    769635 8auv:G (2.38) BS01 rna ? GO:0000447 ... A0A1S4A3T4 37156858
    769636 8auv:H (2.38) BS01 rna ? GO:0003729 ... A0A1S3ZXI6 37156858
    769637 8auv:I (2.38) BS01 rna ? GO:0003735 ... A0A076L2E2 37156858
    769638 8auv:J (2.38) BS01 rna ? GO:0003729 ... A0A1S4CWI7 37156858
    769639 8auv:J (2.38) BS02 ZN ? GO:0003729 ... A0A1S4CWI7 37156858
    769640 8auv:K (2.38) BS01 rna ? GO:0000028 ... A0A1S3XJK0 37156858
    769641 8auv:L (2.38) BS01 rna ? GO:0000028 ... A0A1S4AS05 37156858
    769642 8auv:M (2.38) BS01 rna ? GO:0003735 ... A0A1S3XGJ0 37156858
    769643 8auv:N (2.38) BS01 rna ? GO:0003729 ... A0A1S4C0C1 37156858
    769644 8auv:N (2.38) BS02 ZN ? GO:0003729 ... A0A1S4C0C1 37156858
    769645 8auv:O (2.38) BS01 rna ? GO:0003735 ... A0A1S3Z906 37156858
    769646 8auv:P (2.38) BS01 rna ? GO:0000462 ... A0A1S4CZK3 37156858
    769647 8auv:Q (2.38) BS01 rna ? GO:0005080 ... A0A1S4ABX7 37156858
    769648 8auv:R (2.38) BS01 rna ? GO:0003723 ... A0A1S3XHL0 37156858
    769649 8auv:S (2.38) BS01 rna ? GO:0000028 ... A0A1S3XAN1 37156858
    769650 8auv:T (2.38) BS01 rna ? GO:0003735 ... A0A1S4C879 37156858
    769651 8auv:T (2.38) BS02 rna ? GO:0003735 ... A0A1S4C879 37156858
    769652 8auv:U (2.38) BS01 rna ? GO:0003676 ... A0A1S3YM01 37156858
    769653 8auv:U (2.38) BS02 MG ? GO:0003676 ... A0A1S3YM01 37156858
    769654 8auv:V (2.38) BS01 rna ? GO:0002181 ... A0A1S4DPT4 37156858
    769655 8auv:V (2.38) BS02 ZN ? GO:0002181 ... A0A1S4DPT4 37156858
    769656 8auv:W (2.38) BS01 rna ? GO:0003735 ... A0A1S3ZRI7 37156858
    769657 8auv:X (2.38) BS01 rna ? GO:0003735 ... A0A1S4BW10 37156858
    769658 8auv:Y (2.38) BS01 rna ? GO:0000028 ... A0A1S4DFI4 37156858
    769659 8auv:Z (2.38) BS01 rna ? GO:0000028 ... A0A1S3Y4M0 37156858
    769660 8auv:a (2.38) BS01 rna ? GO:0003723 ... A0A1S4BXU2 37156858
    769661 8auv:b (2.38) BS01 rna ? GO:0003723 ... A0A1S4B907 37156858
    769662 8auv:c (2.38) BS01 rna ? GO:0003723 ... A0A1S3XAX8 37156858
    769663 8auv:d (2.38) BS01 rna ? GO:0000028 ... A0A1S4BXT5 37156858
    769664 8auv:e (2.38) BS01 rna ? GO:0003735 ... A0A1S4DBQ8 37156858
    769665 8auv:f (2.38) BS01 rna ? GO:0000462 ... A0A1S4AU23 37156858
    769666 8auv:k (2.38) BS01 rna ? GO:0003735 ... A0A1S3Z3Y7 37156858
    769667 8auv:l (2.38) BS01 rna ? GO:0003723 ... A0A1S4DHU6 37156858
    769668 8auw:A (7.2) BS01 ZN 2.3.2.27 GO:0000922 ... Q9NR09 36758105
    769669 8auw:B (7.2) BS01 ZN 2.3.2.27 GO:0000922 ... Q9NR09 36758105
    769670 8auy:A (1.5) BS01 peptide ? GO:0000122 ... P31947 37676236
    769671 8auy:A (1.5) BS02 O2X ? GO:0000122 ... P31947 37676236
    769672 8auz:A (2.66) BS01 O9C 2.7.11.1
    2.7.11.26
    GO:0004672 ... P49841 36913879
    769673 8auz:B (2.66) BS01 O9C 2.7.11.1
    2.7.11.26
    GO:0004672 ... P49841 36913879
    769674 8av0:A (1.5) BS01 peptide ? GO:0000122 ... P31947 37252362
    769675 8av0:A (1.5) BS02 O6C ? GO:0000122 ... P31947 37252362
    769676 8av1:A (2.15) BS01 O9L 2.7.11.1
    2.7.11.26
    GO:0004672 ... P49841 36913879
    769677 8av1:B (2.15) BS01 O9L 2.7.11.1
    2.7.11.26
    GO:0004672 ... P49841 36913879
    769678 8av3:A (1.8) BS01 peptide ? GO:0000122 ... P31947 37676236
    769679 8av3:A (1.8) BS02 O3T ? GO:0000122 ... P31947 37676236
    769680 8av4:A (1.6) BS01 peptide ? GO:0000122 ... P31947 37676236
    769681 8av4:A (1.6) BS02 O49 ? GO:0000122 ... P31947 37676236
    769682 8av5:A (1.62) BS01 MG 1.11.2.1 GO:0004601 ... B9W4V6 N/A
    769683 8av5:A (1.62) BS02 HEM 1.11.2.1 GO:0004601 ... B9W4V6 N/A
    769684 8av6:A (4.68) BS01 ADP 3.6.4.12 GO:0004386 ... G0RYI5 36490333
    769685 8av6:B (4.68) BS01 ADP 3.6.4.12 GO:0004386 ... G0RYI5 36490333
    769686 8av6:C (4.68) BS01 ADP 3.6.4.12 GO:0004386 ... G0RYI5 36490333
    769687 8av6:D (4.68) BS01 ADP 3.6.4.12 GO:0004386 ... G0RYC2 36490333
    769688 8av6:E (4.68) BS01 ADP 3.6.4.12 GO:0004386 ... G0RYC2 36490333
    769689 8av6:E (4.68) BS02 ADP 3.6.4.12 GO:0004386 ... G0RYC2 36490333
    769690 8av6:F (4.68) BS01 ADP 3.6.4.12 GO:0004386 ... G0RYC2 36490333
    769691 8av6:G (4.68) BS01 dna N/A GO:0003677 ... N/A 36490333
    769692 8av6:G (4.68) BS02 dna N/A GO:0003677 ... N/A 36490333
    769693 8av6:I (4.68) BS01 dna ? GO:0005634 ... G0S590 36490333
    769694 8av6:J (4.68) BS01 dna ? N/A G0S589 36490333
    769695 8av6:J (4.68) BS02 ATP ? N/A G0S589 36490333
    769696 8av6:M (4.68) BS01 dna ? GO:0000786 ... Q71DI3 36490333
    769697 8av6:M (4.68) BS02 dna ? GO:0000786 ... Q71DI3 36490333
    769698 8av6:N (4.68) BS01 dna ? GO:0000781 ... P62805 36490333
    769699 8av6:N (4.68) BS02 dna ? GO:0000781 ... P62805 36490333
    769700 8av6:O (4.68) BS01 dna ? GO:0000786 ... P0C0S8 36490333
    769701 8av6:O (4.68) BS02 dna ? GO:0000786 ... P0C0S8 36490333
    769702 8av6:P (4.68) BS01 dna ? GO:0000786 ... P62807 36490333
    769703 8av6:P (4.68) BS02 dna ? GO:0000786 ... P62807 36490333
    769704 8av6:Q (4.68) BS01 dna ? GO:0000786 ... Q71DI3 36490333
    769705 8av6:Q (4.68) BS02 dna ? GO:0000786 ... Q71DI3 36490333
    769706 8av6:R (4.68) BS01 dna ? GO:0000781 ... P62805 36490333
    769707 8av6:R (4.68) BS02 dna ? GO:0000781 ... P62805 36490333
    769708 8av6:S (4.68) BS01 dna ? GO:0000786 ... P0C0S8 36490333
    769709 8av7:A (1.4) BS01 peptide ? GO:0000122 ... P31947 37676236
    769710 8av7:A (1.4) BS02 O4I ? GO:0000122 ... P31947 37676236
    769711 8av8:A (1.8) BS01 peptide ? GO:0000122 ... P31947 37676236
    769712 8av8:A (1.8) BS02 O4R ? GO:0000122 ... P31947 37676236
    769713 8av9:A (1.99) BS01 VF8 ? GO:0042981 ... Q07820 37186857
    769714 8ava:A (1.354) BS01 ZN 3.3.2.6
    3.4.11.4
    GO:0003723 ... P09960 37108702
    769715 8ava:A (1.354) BS02 OVO 3.3.2.6
    3.4.11.4
    GO:0003723 ... P09960 37108702
    769716 8avg:C (4.01) BS01 SF4 2.3.1.311 GO:0000049 ... Q9CZX0 36617428
    769717 8avg:C (4.01) BS02 SAM 2.3.1.311 GO:0000049 ... Q9CZX0 36617428
    769718 8avh:B (1.9) BS01 PDO 1.14.14.18 GO:0004392 ... Q812Q3 37371954
    769719 8avi:A (2.0) BS01 HEM 1.14.14.18 GO:0004392 ... Q812Q3 37371954
    769720 8avi:B (2.0) BS01 HEM 1.14.14.18 GO:0004392 ... Q812Q3 37371954
    769721 8avk:A (2.1) BS01 FE 1.15.1.1 GO:0004784 ... A0A0G1X6V3 37037909
    769722 8avk:B (2.1) BS01 FE 1.15.1.1 GO:0004784 ... A0A0G1X6V3 37037909
    769723 8avl:A (1.6) BS01 FE 1.15.1.1 GO:0004784 ... P53638 37037909
    769724 8avl:B (1.6) BS01 FE 1.15.1.1 GO:0004784 ... P53638 37037909
    769725 8avl:C (1.6) BS01 FE 1.15.1.1 GO:0004784 ... P53638 37037909
    769726 8avl:D (1.6) BS01 FE 1.15.1.1 GO:0004784 ... P53638 37037909
    769727 8avl:E (1.6) BS01 FE 1.15.1.1 GO:0004784 ... P53638 37037909
    769728 8avl:F (1.6) BS01 FE 1.15.1.1 GO:0004784 ... P53638 37037909
    769729 8avl:G (1.6) BS01 FE 1.15.1.1 GO:0004784 ... P53638 37037909
    769730 8avl:H (1.6) BS01 FE 1.15.1.1 GO:0004784 ... P53638 37037909
    769731 8avm:A (2.0) BS01 FE 1.15.1.1 GO:0004784 ... P53638 37037909
    769732 8avm:B (2.0) BS01 FE 1.15.1.1 GO:0004784 ... P53638 37037909
    769733 8avm:C (2.0) BS01 FE 1.15.1.1 GO:0004784 ... P53638 37037909
    769734 8avm:D (2.0) BS01 FE 1.15.1.1 GO:0004784 ... P53638 37037909
    769735 8avm:E (2.0) BS01 FE 1.15.1.1 GO:0004784 ... P53638 37037909
    769736 8avm:F (2.0) BS01 FE 1.15.1.1 GO:0004784 ... P53638 37037909
    769737 8avn:A (1.65) BS01 MN 1.15.1.1 GO:0004784 ... A0A0G1X6V3 37037909
    769738 8avn:B (1.65) BS01 MN 1.15.1.1 GO:0004784 ... A0A0G1X6V3 37037909
    769739 8avp:A (2.87) BS01 BTN N/A GO:0009374 ... N/A 36853192
    769740 8avp:B (2.87) BS01 BTN N/A GO:0009374 ... N/A 36853192
    769741 8avp:C (2.87) BS01 BTN N/A GO:0009374 ... N/A 36853192
    769742 8avp:D (2.87) BS01 BTN N/A GO:0009374 ... N/A 36853192
    769743 8avp:E (2.87) BS01 BTN N/A GO:0009374 ... N/A 36853192
    769744 8avp:F (2.87) BS01 BTN N/A GO:0009374 ... N/A 36853192
    769745 8avp:G (2.87) BS01 BTN N/A GO:0009374 ... N/A 36853192
    769746 8avp:H (2.87) BS01 BTN N/A GO:0009374 ... N/A 36853192
    769747 8avp:I (2.87) BS01 BTN N/A GO:0009374 ... N/A 36853192
    769748 8avp:J (2.87) BS01 BTN N/A GO:0009374 ... N/A 36853192
    769749 8avp:K (2.87) BS01 BTN N/A GO:0009374 ... N/A 36853192
    769750 8avp:L (2.87) BS01 BTN N/A GO:0009374 ... N/A 36853192
    769751 8avp:M (2.87) BS01 BTN N/A GO:0009374 ... N/A 36853192
    769752 8avp:N (2.87) BS01 BTN N/A GO:0009374 ... N/A 36853192
    769753 8avp:O (2.87) BS01 BTN N/A GO:0009374 ... N/A 36853192
    769754 8avp:P (2.87) BS01 BTN N/A GO:0009374 ... N/A 36853192
    769755 8avp:Q (2.87) BS01 BTN N/A GO:0009374 ... N/A 36853192
    769756 8avp:R (2.87) BS01 BTN N/A GO:0009374 ... N/A 36853192
    769757 8avp:S (2.87) BS01 BTN N/A GO:0009374 ... N/A 36853192
    769758 8avp:T (2.87) BS01 BTN N/A GO:0009374 ... N/A 36853192
    769759 8avq:A (2.0) BS01 UDX ? GO:0046872 ... Q89410 39555664
    769760 8avq:A (2.0) BS02 CA ? GO:0046872 ... Q89410 39555664
    769761 8avq:A (2.0) BS03 MG ? GO:0046872 ... Q89410 39555664
    769762 8avq:A (2.0) BS04 MG ? GO:0046872 ... Q89410 39555664
    769763 8avq:A (2.0) BS05 MG ? GO:0046872 ... Q89410 39555664
    769764 8avq:A (2.0) BS06 MG ? GO:0046872 ... Q89410 39555664
    769765 8avq:A (2.0) BS07 MG ? GO:0046872 ... Q89410 39555664
    769766 8avq:B (2.0) BS01 UDX ? GO:0046872 ... Q89410 39555664
    769767 8avq:B (2.0) BS02 CA ? GO:0046872 ... Q89410 39555664
    769768 8avq:B (2.0) BS03 CA ? GO:0046872 ... Q89410 39555664
    769769 8avq:B (2.0) BS04 MG ? GO:0046872 ... Q89410 39555664
    769770 8avq:B (2.0) BS05 MG ? GO:0046872 ... Q89410 39555664
    769771 8avq:B (2.0) BS06 MG ? GO:0046872 ... Q89410 39555664
    769772 8avq:B (2.0) BS07 MG ? GO:0046872 ... Q89410 39555664
    769773 8avq:B (2.0) BS08 MG ? GO:0046872 ... Q89410 39555664
    769774 8avq:B (2.0) BS09 MG ? GO:0046872 ... Q89410 39555664
    769775 8avq:B (2.0) BS10 MG ? GO:0046872 ... Q89410 39555664
    769776 8avq:B (2.0) BS11 MG ? GO:0046872 ... Q89410 39555664
    769777 8avq:C (2.0) BS01 UDX ? GO:0046872 ... Q89410 39555664
    769778 8avq:C (2.0) BS02 CA ? GO:0046872 ... Q89410 39555664
    769779 8avq:C (2.0) BS03 MG ? GO:0046872 ... Q89410 39555664
    769780 8avq:C (2.0) BS04 MG ? GO:0046872 ... Q89410 39555664
    769781 8avq:C (2.0) BS05 MG ? GO:0046872 ... Q89410 39555664
    769782 8avq:C (2.0) BS06 MG ? GO:0046872 ... Q89410 39555664
    769783 8avq:C (2.0) BS07 MG ? GO:0046872 ... Q89410 39555664
    769784 8avq:C (2.0) BS08 MG ? GO:0046872 ... Q89410 39555664
    769785 8avq:C (2.0) BS09 MG ? GO:0046872 ... Q89410 39555664
    769786 8avq:C (2.0) BS10 MG ? GO:0046872 ... Q89410 39555664
    769787 8avq:C (2.0) BS11 MG ? GO:0046872 ... Q89410 39555664
    769788 8avq:D (2.0) BS01 UDX ? GO:0046872 ... Q89410 39555664
    769789 8avq:D (2.0) BS02 CA ? GO:0046872 ... Q89410 39555664
    769790 8avq:D (2.0) BS03 MG ? GO:0046872 ... Q89410 39555664
    769791 8avq:D (2.0) BS04 MG ? GO:0046872 ... Q89410 39555664
    769792 8avq:D (2.0) BS05 MG ? GO:0046872 ... Q89410 39555664
    769793 8avq:D (2.0) BS06 MG ? GO:0046872 ... Q89410 39555664
    769794 8avq:D (2.0) BS07 MG ? GO:0046872 ... Q89410 39555664
    769795 8avq:D (2.0) BS08 MG ? GO:0046872 ... Q89410 39555664
    769796 8avt:A (1.2) BS01 G3P ? GO:0005576 ... Q8GPI4 37464011
    769797 8avv:A (3.4) BS01 LBV 2.7.13.3 GO:0000155 ... Q9RZA4
    Q9RZA5
    36509762
    769798 8avv:B (3.4) BS01 LBV 2.7.13.3 GO:0000155 ... Q9RZA4
    Q9RZA5
    36509762
    769799 8avw:A (3.62) BS01 LBV 2.7.13.3 GO:0000155 ... Q9RZA4
    Q9RZA5
    36509762
    769800 8avw:B (3.62) BS01 LBV 2.7.13.3 GO:0000155 ... Q9RZA4
    Q9RZA5
    36509762

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).