SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    769601 8aag:A (10.0) BS02 dna ? GO:0000786 ... Q71DI3 36610392
    769602 8aag:B (10.0) BS01 dna ? GO:0000781 ... P62805 36610392
    769603 8aag:B (10.0) BS02 dna ? GO:0000781 ... P62805 36610392
    769604 8aag:C (10.0) BS01 dna ? GO:0000786 ... P06897 36610392
    769605 8aag:C (10.0) BS02 dna ? GO:0000786 ... P06897 36610392
    769606 8aag:D (10.0) BS01 dna ? GO:0000786 ... P02281 36610392
    769607 8aag:D (10.0) BS02 dna ? GO:0000786 ... P02281 36610392
    769608 8aag:E (10.0) BS01 dna ? GO:0000786 ... Q71DI3 36610392
    769609 8aag:E (10.0) BS02 dna ? GO:0000786 ... Q71DI3 36610392
    769610 8aag:F (10.0) BS01 dna ? GO:0000781 ... P62805 36610392
    769611 8aag:F (10.0) BS02 dna ? GO:0000781 ... P62805 36610392
    769612 8aag:G (10.0) BS01 dna ? GO:0000786 ... P06897 36610392
    769613 8aag:G (10.0) BS02 dna ? GO:0000786 ... P06897 36610392
    769614 8aag:H (10.0) BS01 dna ? GO:0000786 ... P02281 36610392
    769615 8aag:H (10.0) BS02 dna ? GO:0000786 ... P02281 36610392
    769616 8aag:Z (10.0) BS01 dna ? GO:0000786 ... P22844 36610392
    769617 8aag:Z (10.0) BS02 dna ? GO:0000786 ... P22844 36610392
    769618 8aai:A (2.76) BS01 LKV ? N/A O00560 36939673
    769619 8aai:B (2.76) BS01 LKV ? N/A O00560 36939673
    769620 8aai:C (2.76) BS01 LKV ? N/A O00560 36939673
    769621 8aai:C (2.76) BS02 LKV ? N/A O00560 36939673
    769622 8aai:D (2.76) BS01 LKV ? N/A O00560 36939673
    769623 8aaj:A (3.7) BS01 ZN ? GO:0000724 ... Q9V1Y9 37087464
    769624 8aak:A (2.554) BS01 LL6 ? N/A O00560 36939673
    769625 8aak:B (2.554) BS01 LL6 ? N/A O00560 36939673
    769626 8aam:M (2.29) BS01 ADP ? GO:0000902 ... A0A150MJ77 N/A
    769627 8aan:A (2.19) BS01 dna ? GO:0003887 ... P03856 37713613
    769628 8aan:A (2.19) BS02 dna ? GO:0003887 ... P03856 37713613
    769629 8aan:A (2.19) BS03 dna ? GO:0003887 ... P03856 37713613
    769630 8aan:A (2.19) BS04 MG ? GO:0003887 ... P03856 37713613
    769631 8aao:A (2.469) BS01 LN2 ? N/A O00560 36939673
    769632 8aao:B (2.469) BS01 LN2 ? N/A O00560 36939673
    769633 8aap:A (2.174) BS01 LLV ? N/A O00560 36939673
    769634 8aap:B (2.174) BS01 LLV ? N/A O00560 36939673
    769635 8aas:A (3.2) BS01 dna ? GO:0003676 ... G8ZHS0 37087464
    769636 8aas:A (3.2) BS02 ZN ? GO:0003676 ... G8ZHS0 37087464
    769637 8aas:A (3.2) BS03 CA ? GO:0003676 ... G8ZHS0 37087464
    769638 8aas:B (3.2) BS01 dna ? GO:0003676 ... Q9V1Z1 37087464
    769639 8aat:A (2.3) BS01 PLP 2.6.1.1
    2.6.1.7
    GO:0003824 ... P00508 1593633
    769640 8aat:B (2.3) BS01 PLP 2.6.1.1
    2.6.1.7
    GO:0003824 ... P00508 1593633
    769641 8aau:L (1.74) BS01 LH0 2.7.11.1 GO:0004672 ... P53667 36136092
    769642 8aau:L (1.74) BS02 MG 2.7.11.1 GO:0004672 ... P53667 36136092
    769643 8aav:A (2.0) BS01 O3K 1.16.3.1 GO:0004322 ... P02794 36504125
    769644 8aav:A (2.0) BS02 O3K 1.16.3.1 GO:0004322 ... P02794 36504125
    769645 8aav:A (2.0) BS03 FE 1.16.3.1 GO:0004322 ... P02794 36504125
    769646 8aav:A (2.0) BS04 MG 1.16.3.1 GO:0004322 ... P02794 36504125
    769647 8aav:B (2.0) BS01 O3K 1.16.3.1 GO:0004322 ... P02794 36504125
    769648 8aav:B (2.0) BS02 O3K 1.16.3.1 GO:0004322 ... P02794 36504125
    769649 8aav:B (2.0) BS03 FE 1.16.3.1 GO:0004322 ... P02794 36504125
    769650 8aav:C (2.0) BS01 O3K 1.16.3.1 GO:0004322 ... P02794 36504125
    769651 8aav:C (2.0) BS02 O3K 1.16.3.1 GO:0004322 ... P02794 36504125
    769652 8aav:C (2.0) BS03 FE 1.16.3.1 GO:0004322 ... P02794 36504125
    769653 8aav:D (2.0) BS01 O3K 1.16.3.1 GO:0004322 ... P02794 36504125
    769654 8aav:D (2.0) BS02 O3K 1.16.3.1 GO:0004322 ... P02794 36504125
    769655 8aav:D (2.0) BS03 FE 1.16.3.1 GO:0004322 ... P02794 36504125
    769656 8aav:E (2.0) BS01 O3K 1.16.3.1 GO:0004322 ... P02794 36504125
    769657 8aav:E (2.0) BS02 O3K 1.16.3.1 GO:0004322 ... P02794 36504125
    769658 8aav:E (2.0) BS03 FE 1.16.3.1 GO:0004322 ... P02794 36504125
    769659 8aav:F (2.0) BS01 O3K 1.16.3.1 GO:0004322 ... P02794 36504125
    769660 8aav:F (2.0) BS02 O3K 1.16.3.1 GO:0004322 ... P02794 36504125
    769661 8aav:F (2.0) BS03 FE 1.16.3.1 GO:0004322 ... P02794 36504125
    769662 8aav:F (2.0) BS04 MG 1.16.3.1 GO:0004322 ... P02794 36504125
    769663 8aav:G (2.0) BS01 O3K 1.16.3.1 GO:0004322 ... P02794 36504125
    769664 8aav:G (2.0) BS02 O3K 1.16.3.1 GO:0004322 ... P02794 36504125
    769665 8aav:G (2.0) BS03 FE 1.16.3.1 GO:0004322 ... P02794 36504125
    769666 8aav:G (2.0) BS04 MG 1.16.3.1 GO:0004322 ... P02794 36504125
    769667 8aav:H (2.0) BS01 O3K 1.16.3.1 GO:0004322 ... P02794 36504125
    769668 8aav:H (2.0) BS02 O3K 1.16.3.1 GO:0004322 ... P02794 36504125
    769669 8aav:H (2.0) BS03 FE 1.16.3.1 GO:0004322 ... P02794 36504125
    769670 8aav:H (2.0) BS04 MG 1.16.3.1 GO:0004322 ... P02794 36504125
    769671 8aaz:A (1.27) BS01 ATP 3.2.1.17 GO:0003796 ... P00698 36608272
    769672 8aaz:A (1.27) BS02 ATP 3.2.1.17 GO:0003796 ... P00698 36608272
    769673 8aaz:A (1.27) BS03 ATP 3.2.1.17 GO:0003796 ... P00698 36608272
    769674 8ab0:D (6.09) BS01 ZN ? GO:0003677 ... Q5SHY0 37081315
    769675 8ab0:E (6.09) BS01 ZN ? GO:0003677 ... Q5SHY0 37081315
    769676 8ab0:F (6.09) BS01 dna ? GO:0003677 ... Q5SHY0 37081315
    769677 8ab0:F (6.09) BS02 ZN ? GO:0003677 ... Q5SHY0 37081315
    769678 8ab3:A (2.616) BS01 FBP 1.1.1.27 GO:0003824 ... K9Z684 37797308
    769679 8ab3:A (2.616) BS02 NAI 1.1.1.27 GO:0003824 ... K9Z684 37797308
    769680 8ab3:B (2.616) BS01 FBP 1.1.1.27 GO:0003824 ... K9Z684 37797308
    769681 8ab3:B (2.616) BS02 NAI 1.1.1.27 GO:0003824 ... K9Z684 37797308
    769682 8ab3:C (2.616) BS01 NAI 1.1.1.27 GO:0003824 ... K9Z684 37797308
    769683 8ab3:C (2.616) BS02 FBP 1.1.1.27 GO:0003824 ... K9Z684 37797308
    769684 8ab3:D (2.616) BS01 FBP 1.1.1.27 GO:0003824 ... K9Z684 37797308
    769685 8ab3:D (2.616) BS02 NAI 1.1.1.27 GO:0003824 ... K9Z684 37797308
    769686 8ab4:M (2.22) BS01 GTP ? GO:0000902 ... A0A150MJ77 N/A
    769687 8ab5:A (2.4) BS01 peptide 3.4.21.105 GO:0004252 ... P09391 38901105
    769688 8ab5:B (2.4) BS01 peptide 3.4.21.105 GO:0004252 ... P09391 38901105
    769689 8ab6:C (2.0) BS01 HEM ? GO:0005743 ... Q9B6D0 36598500
    769690 8ab6:C (2.0) BS02 HEM ? GO:0005743 ... Q9B6D0 36598500
    769691 8ab6:D (2.0) BS01 HEC 7.1.1.8 GO:0005743 ... Q6CGP7 36598500
    769692 8ab6:N (2.0) BS01 HEM ? GO:0005743 ... Q9B6D0 36598500
    769693 8ab6:N (2.0) BS02 HEM ? GO:0005743 ... Q9B6D0 36598500
    769694 8ab6:O (2.0) BS01 HEC 7.1.1.8 GO:0005743 ... Q6CGP7 36598500
    769695 8ab7:C (3.3) BS01 HEM ? GO:0005743 ... Q9B6D0 36598500
    769696 8ab7:C (3.3) BS02 HEM ? GO:0005743 ... Q9B6D0 36598500
    769697 8ab7:C (3.3) BS03 AWB ? GO:0005743 ... Q9B6D0 36598500
    769698 8ab7:C (3.3) BS04 AOQ ? GO:0005743 ... Q9B6D0 36598500
    769699 8ab7:D (3.3) BS01 HEC 7.1.1.8 GO:0005743 ... Q6CGP7 36598500
    769700 8ab7:E (3.3) BS01 FES 7.1.1.8 GO:0005739 ... Q6CI02 36598500
    769701 8ab7:N (3.3) BS01 HEM ? GO:0005743 ... Q9B6D0 36598500
    769702 8ab7:N (3.3) BS02 HEM ? GO:0005743 ... Q9B6D0 36598500
    769703 8ab7:N (3.3) BS03 AWB ? GO:0005743 ... Q9B6D0 36598500
    769704 8ab7:N (3.3) BS04 AOQ ? GO:0005743 ... Q9B6D0 36598500
    769705 8ab7:O (3.3) BS01 HEC 7.1.1.8 GO:0005743 ... Q6CGP7 36598500
    769706 8ab7:P (3.3) BS01 FES 7.1.1.8 GO:0005739 ... Q6CI02 36598500
    769707 8ab8:C (2.6) BS01 HEM ? GO:0005743 ... Q9B6D0 36598500
    769708 8ab8:C (2.6) BS02 HEM ? GO:0005743 ... Q9B6D0 36598500
    769709 8ab8:C (2.6) BS03 DCQ ? GO:0005743 ... Q9B6D0 36598500
    769710 8ab8:D (2.6) BS01 HEC 7.1.1.8 GO:0005743 ... Q6CGP7 36598500
    769711 8ab8:N (2.6) BS01 HEM ? GO:0005743 ... Q9B6D0 36598500
    769712 8ab8:N (2.6) BS02 HEM ? GO:0005743 ... Q9B6D0 36598500
    769713 8ab8:O (2.6) BS01 HEC 7.1.1.8 GO:0005743 ... Q6CGP7 36598500
    769714 8ab8:P (2.6) BS01 FES 7.1.1.8 GO:0005739 ... Q6CI02 36598500
    769715 8ab9:C (3.3) BS01 HEM ? GO:0005743 ... Q9B6D0 36598500
    769716 8ab9:C (3.3) BS02 HEM ? GO:0005743 ... Q9B6D0 36598500
    769717 8ab9:D (3.3) BS01 HEC 7.1.1.8 GO:0005743 ... Q6CGP7 36598500
    769718 8ab9:N (3.3) BS01 HEM ? GO:0005743 ... Q9B6D0 36598500
    769719 8ab9:N (3.3) BS02 HEM ? GO:0005743 ... Q9B6D0 36598500
    769720 8ab9:O (3.3) BS01 HEC 7.1.1.8 GO:0005743 ... Q6CGP7 36598500
    769721 8ab9:P (3.3) BS01 FES 7.1.1.8 GO:0005739 ... Q6CI02 36598500
    769722 8aba:C (3.2) BS01 HEM ? GO:0005743 ... Q9B6D0 36598500
    769723 8aba:C (3.2) BS02 HEM ? GO:0005743 ... Q9B6D0 36598500
    769724 8aba:D (3.2) BS01 HEC 7.1.1.8 GO:0005743 ... Q6CGP7 36598500
    769725 8aba:N (3.2) BS01 HEM ? GO:0005743 ... Q9B6D0 36598500
    769726 8aba:N (3.2) BS02 HEM ? GO:0005743 ... Q9B6D0 36598500
    769727 8aba:O (3.2) BS01 HEC 7.1.1.8 GO:0005743 ... Q6CGP7 36598500
    769728 8aba:P (3.2) BS01 FES 7.1.1.8 GO:0005739 ... Q6CI02 36598500
    769729 8abb:C (3.2) BS01 HEM ? GO:0005743 ... Q9B6D0 36598500
    769730 8abb:C (3.2) BS02 HEM ? GO:0005743 ... Q9B6D0 36598500
    769731 8abb:D (3.2) BS01 HEC 7.1.1.8 GO:0005743 ... Q6CGP7 36598500
    769732 8abb:N (3.2) BS01 HEM ? GO:0005743 ... Q9B6D0 36598500
    769733 8abb:N (3.2) BS02 HEM ? GO:0005743 ... Q9B6D0 36598500
    769734 8abb:O (3.2) BS01 HEC 7.1.1.8 GO:0005743 ... Q6CGP7 36598500
    769735 8abb:P (3.2) BS01 FES 7.1.1.8 GO:0005739 ... Q6CI02 36598500
    769736 8abe:C (2.3) BS01 HEM ? GO:0005743 ... Q9B6D0 36598500
    769737 8abe:C (2.3) BS02 HEM ? GO:0005743 ... Q9B6D0 36598500
    769738 8abe:D (2.3) BS01 HEC 7.1.1.8 GO:0005743 ... Q6CGP7 36598500
    769739 8abe:N (2.3) BS01 HEM ? GO:0005743 ... Q9B6D0 36598500
    769740 8abe:N (2.3) BS02 HEM ? GO:0005743 ... Q9B6D0 36598500
    769741 8abe:O (2.3) BS01 HEC 7.1.1.8 GO:0005743 ... Q6CGP7 36598500
    769742 8abe:P (2.3) BS01 FES 7.1.1.8 GO:0005739 ... Q6CI02 36598500
    769743 8abf:C (2.3) BS01 HEM ? GO:0005743 ... Q9B6D0 36598500
    769744 8abf:C (2.3) BS02 HEM ? GO:0005743 ... Q9B6D0 36598500
    769745 8abf:D (2.3) BS01 HEC 7.1.1.8 GO:0005743 ... Q6CGP7 36598500
    769746 8abf:N (2.3) BS01 HEM ? GO:0005743 ... Q9B6D0 36598500
    769747 8abf:N (2.3) BS02 HEM ? GO:0005743 ... Q9B6D0 36598500
    769748 8abf:O (2.3) BS01 HEC 7.1.1.8 GO:0005743 ... Q6CGP7 36598500
    769749 8abf:P (2.3) BS01 FES 7.1.1.8 GO:0005739 ... Q6CI02 36598500
    769750 8abg:C (2.3) BS01 HEM ? GO:0005743 ... Q9B6D0 36598500
    769751 8abg:C (2.3) BS02 HEM ? GO:0005743 ... Q9B6D0 36598500
    769752 8abg:D (2.3) BS01 HEC 7.1.1.8 GO:0005743 ... Q6CGP7 36598500
    769753 8abg:N (2.3) BS01 HEM ? GO:0005743 ... Q9B6D0 36598500
    769754 8abg:N (2.3) BS02 HEM ? GO:0005743 ... Q9B6D0 36598500
    769755 8abg:O (2.3) BS01 HEC 7.1.1.8 GO:0005743 ... Q6CGP7 36598500
    769756 8abg:P (2.3) BS01 FES 7.1.1.8 GO:0005739 ... Q6CI02 36598500
    769757 8abh:C (3.0) BS01 HEM ? GO:0005743 ... Q9B6D0 36598500
    769758 8abh:C (3.0) BS02 HEM ? GO:0005743 ... Q9B6D0 36598500
    769759 8abh:C (3.0) BS03 AWB ? GO:0005743 ... Q9B6D0 36598500
    769760 8abh:D (3.0) BS01 HEC 7.1.1.8 GO:0005743 ... Q6CGP7 36598500
    769761 8abh:N (3.0) BS01 HEM ? GO:0005743 ... Q9B6D0 36598500
    769762 8abh:N (3.0) BS02 HEM ? GO:0005743 ... Q9B6D0 36598500
    769763 8abh:N (3.0) BS03 AWB ? GO:0005743 ... Q9B6D0 36598500
    769764 8abh:O (3.0) BS01 HEC 7.1.1.8 GO:0005743 ... Q6CGP7 36598500
    769765 8abh:P (3.0) BS01 FES 7.1.1.8 GO:0005739 ... Q6CI02 36598500
    769766 8abi:C (3.0) BS01 HEM ? GO:0005743 ... Q9B6D0 36598500
    769767 8abi:C (3.0) BS02 HEM ? GO:0005743 ... Q9B6D0 36598500
    769768 8abi:C (3.0) BS03 AWB ? GO:0005743 ... Q9B6D0 36598500
    769769 8abi:D (3.0) BS01 HEC 7.1.1.8 GO:0005743 ... Q6CGP7 36598500
    769770 8abi:N (3.0) BS01 HEM ? GO:0005743 ... Q9B6D0 36598500
    769771 8abi:N (3.0) BS02 HEM ? GO:0005743 ... Q9B6D0 36598500
    769772 8abi:N (3.0) BS03 AWB ? GO:0005743 ... Q9B6D0 36598500
    769773 8abi:O (3.0) BS01 HEC 7.1.1.8 GO:0005743 ... Q6CGP7 36598500
    769774 8abi:P (3.0) BS01 FES 7.1.1.8 GO:0005739 ... Q6CI02 36598500
    769775 8abj:C (3.7) BS01 HEM ? GO:0005743 ... Q9B6D0 36598500
    769776 8abj:C (3.7) BS02 HEM ? GO:0005743 ... Q9B6D0 36598500
    769777 8abj:C (3.7) BS03 AWB ? GO:0005743 ... Q9B6D0 36598500
    769778 8abj:D (3.7) BS01 HEC 7.1.1.8 GO:0005743 ... Q6CGP7 36598500
    769779 8abj:N (3.7) BS01 HEM ? GO:0005743 ... Q9B6D0 36598500
    769780 8abj:N (3.7) BS02 HEM ? GO:0005743 ... Q9B6D0 36598500
    769781 8abj:N (3.7) BS03 AWB ? GO:0005743 ... Q9B6D0 36598500
    769782 8abj:O (3.7) BS01 HEC 7.1.1.8 GO:0005743 ... Q6CGP7 36598500
    769783 8abj:P (3.7) BS01 FES 7.1.1.8 GO:0005739 ... Q6CI02 36598500
    769784 8abk:C (2.5) BS01 HEM ? GO:0005743 ... Q9B6D0 36598500
    769785 8abk:C (2.5) BS02 HEM ? GO:0005743 ... Q9B6D0 36598500
    769786 8abk:C (2.5) BS03 DCQ ? GO:0005743 ... Q9B6D0 36598500
    769787 8abk:D (2.5) BS01 HEC 7.1.1.8 GO:0005743 ... Q6CGP7 36598500
    769788 8abk:N (2.5) BS01 HEM ? GO:0005743 ... Q9B6D0 36598500
    769789 8abk:N (2.5) BS02 HEM ? GO:0005743 ... Q9B6D0 36598500
    769790 8abk:N (2.5) BS03 DCQ ? GO:0005743 ... Q9B6D0 36598500
    769791 8abk:O (2.5) BS01 HEC 7.1.1.8 GO:0005743 ... Q6CGP7 36598500
    769792 8abk:P (2.5) BS01 FES 7.1.1.8 GO:0005739 ... Q6CI02 36598500
    769793 8abl:C (2.1) BS01 HEM ? GO:0005743 ... Q9B6D0 36598500
    769794 8abl:C (2.1) BS02 HEM ? GO:0005743 ... Q9B6D0 36598500
    769795 8abl:C (2.1) BS03 AWB ? GO:0005743 ... Q9B6D0 36598500
    769796 8abl:D (2.1) BS01 HEC 7.1.1.8 GO:0005743 ... Q6CGP7 36598500
    769797 8abl:N (2.1) BS01 HEM ? GO:0005743 ... Q9B6D0 36598500
    769798 8abl:N (2.1) BS02 HEM ? GO:0005743 ... Q9B6D0 36598500
    769799 8abl:N (2.1) BS03 AWB ? GO:0005743 ... Q9B6D0 36598500
    769800 8abl:O (2.1) BS01 HEC 7.1.1.8 GO:0005743 ... Q6CGP7 36598500

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).