SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    769801 8abm:C (2.8) BS01 HEM ? GO:0005743 ... Q9B6D0 36598500
    769802 8abm:C (2.8) BS02 HEM ? GO:0005743 ... Q9B6D0 36598500
    769803 8abm:D (2.8) BS01 HEC 7.1.1.8 GO:0005743 ... Q6CGP7 36598500
    769804 8abm:N (2.8) BS01 HEM ? GO:0005743 ... Q9B6D0 36598500
    769805 8abm:N (2.8) BS02 HEM ? GO:0005743 ... Q9B6D0 36598500
    769806 8abm:O (2.8) BS01 HEC 7.1.1.8 GO:0005743 ... Q6CGP7 36598500
    769807 8abm:P (2.8) BS01 FES 7.1.1.8 GO:0005739 ... Q6CI02 36598500
    769808 8abo:A (1.97) BS01 231 N/A GO:0004497 ... A0AA82WPC6 N/A
    769809 8abo:A (1.97) BS02 HEM N/A GO:0004497 ... A0AA82WPC6 N/A
    769810 8abp:A (1.49) BS01 GLA ? GO:0015407 ... P02924 2069949 MOAD: Kd=0.01uM
    769811 8abp:A (1.49) BS02 GAL ? GO:0015407 ... P02924 2069949 MOAD: Kd=0.01uM
    769812 8abr:A (2.1) BS01 HEB 1.14.-.- GO:0004497 ... D5DF88 37453052
    769813 8abr:A (2.1) BS02 6NA 1.14.-.- GO:0004497 ... D5DF88 37453052
    769814 8abr:A (2.1) BS03 OCA 1.14.-.- GO:0004497 ... D5DF88 37453052
    769815 8abs:A (1.75) BS01 HEB 1.14.-.- GO:0004497 ... D5DF88 37453052
    769816 8abs:A (1.75) BS02 W2L 1.14.-.- GO:0004497 ... D5DF88 37453052
    769817 8abs:A (1.75) BS03 TES 1.14.-.- GO:0004497 ... D5DF88 37453052
    769818 8abt:A (1.39) BS01 STL ? N/A Q2G4I2 36652470
    769819 8abt:B (1.39) BS01 STL ? N/A Q2G4I2 36652470
    769820 8abu:A (1.661) BS01 LJU ? N/A Q2G4I2 36652470
    769821 8abv:A (1.683) BS01 LJU ? N/A A0ACD6B9D0 36652470
    769822 8abv:A (1.683) BS02 LJL ? N/A A0ACD6B9D0 36652470
    769823 8abw:A (1.83) BS01 LJC ? N/A A0ACD6B9D0 36652470
    769824 8abw:A (1.83) BS02 LHX ? N/A A0ACD6B9D0 36652470
    769825 8abx:A (1.65) BS01 N39 1.13.11.52 GO:0004833 ... P14902 35959923
    769826 8abx:A (1.65) BS02 N2U 1.13.11.52 GO:0004833 ... P14902 35959923
    769827 8aby:C (3.7) BS01 dna 2.7.7.6 GO:0000345 ... P0A8V2 36220101
    769828 8aby:C (3.7) BS02 rna 2.7.7.6 GO:0000345 ... P0A8V2 36220101
    769829 8aby:D (3.7) BS01 dna 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    769830 8aby:D (3.7) BS02 rna 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    769831 8aby:D (3.7) BS03 dna 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    769832 8aby:D (3.7) BS04 MG 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    769833 8aby:D (3.7) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    769834 8aby:D (3.7) BS06 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    769835 8abz:C (3.4) BS01 rna 2.7.7.6 GO:0000345 ... P0A8V2 36220101
    769836 8abz:C (3.4) BS02 dna 2.7.7.6 GO:0000345 ... P0A8V2 36220101
    769837 8abz:D (3.4) BS01 rna 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    769838 8abz:D (3.4) BS02 dna 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    769839 8abz:D (3.4) BS03 MG 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    769840 8abz:D (3.4) BS04 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    769841 8abz:D (3.4) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    769842 8ac0:C (4.1) BS01 dna 2.7.7.6 GO:0000345 ... P0A8V2 36220101
    769843 8ac0:C (4.1) BS02 rna 2.7.7.6 GO:0000345 ... P0A8V2 36220101
    769844 8ac0:C (4.1) BS03 dna 2.7.7.6 GO:0000345 ... P0A8V2 36220101
    769845 8ac0:D (4.1) BS01 dna 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    769846 8ac0:D (4.1) BS02 rna 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    769847 8ac0:D (4.1) BS03 dna 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    769848 8ac0:D (4.1) BS04 MG 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    769849 8ac0:D (4.1) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    769850 8ac0:D (4.1) BS06 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    769851 8ac1:C (4.06) BS01 peptide 2.7.7.6 GO:0000345 ... P0A8V2 36220101
    769852 8ac1:C (4.06) BS02 dna 2.7.7.6 GO:0000345 ... P0A8V2 36220101
    769853 8ac1:C (4.06) BS03 rna 2.7.7.6 GO:0000345 ... P0A8V2 36220101
    769854 8ac1:D (4.06) BS01 peptide 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    769855 8ac1:D (4.06) BS02 dna 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    769856 8ac1:D (4.06) BS03 MG 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    769857 8ac1:D (4.06) BS04 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    769858 8ac1:D (4.06) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    769859 8ac2:D (3.7) BS01 dna 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    769860 8ac2:D (3.7) BS02 MG 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    769861 8ac2:D (3.7) BS03 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    769862 8ac2:D (3.7) BS04 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    769863 8ac3:C (2.8) BS01 HEM ? GO:0005743 ... Q9B6D0 36598500
    769864 8ac3:C (2.8) BS02 HEM ? GO:0005743 ... Q9B6D0 36598500
    769865 8ac3:D (2.8) BS01 HEC 7.1.1.8 GO:0005743 ... Q6CGP7 36598500
    769866 8ac3:N (2.8) BS01 HEM ? GO:0005743 ... Q9B6D0 36598500
    769867 8ac3:N (2.8) BS02 HEM ? GO:0005743 ... Q9B6D0 36598500
    769868 8ac3:O (2.8) BS01 HEC 7.1.1.8 GO:0005743 ... Q6CGP7 36598500
    769869 8ac3:P (2.8) BS01 FES 7.1.1.8 GO:0005739 ... Q6CI02 36598500
    769870 8ac4:C (2.7) BS01 HEM ? GO:0005743 ... Q9B6D0 36598500
    769871 8ac4:C (2.7) BS02 HEM ? GO:0005743 ... Q9B6D0 36598500
    769872 8ac4:D (2.7) BS01 HEC 7.1.1.8 GO:0005743 ... Q6CGP7 36598500
    769873 8ac4:N (2.7) BS01 HEM ? GO:0005743 ... Q9B6D0 36598500
    769874 8ac4:N (2.7) BS02 HEM ? GO:0005743 ... Q9B6D0 36598500
    769875 8ac4:O (2.7) BS01 HEC 7.1.1.8 GO:0005743 ... Q6CGP7 36598500
    769876 8ac4:P (2.7) BS01 FES 7.1.1.8 GO:0005739 ... Q6CI02 36598500
    769877 8ac5:C (3.1) BS01 HEC ? GO:0005743 ... Q9B6D0 36598500
    769878 8ac5:C (3.1) BS02 HEC ? GO:0005743 ... Q9B6D0 36598500
    769879 8ac5:D (3.1) BS01 HEC 7.1.1.8 GO:0005743 ... Q6CGP7 36598500
    769880 8ac5:N (3.1) BS01 HEC ? GO:0005743 ... Q9B6D0 36598500
    769881 8ac5:N (3.1) BS02 HEC ? GO:0005743 ... Q9B6D0 36598500
    769882 8ac5:O (3.1) BS01 HEC 7.1.1.8 GO:0005743 ... Q6CGP7 36598500
    769883 8ac5:P (3.1) BS01 FES 7.1.1.8 GO:0005739 ... Q6CI02 36598500
    769884 8ac7:A (1.4) BS01 ZN 3.4.11.1 GO:0004177 ... Q02PA2 37386135
    769885 8ac7:A (1.4) BS02 ZN 3.4.11.1 GO:0004177 ... Q02PA2 37386135
    769886 8ac7:A (1.4) BS03 ZN 3.4.11.1 GO:0004177 ... Q02PA2 37386135
    769887 8ac7:A (1.4) BS04 ZN 3.4.11.1 GO:0004177 ... Q02PA2 37386135
    769888 8ac7:B (1.4) BS01 ZN 3.4.11.1 GO:0004177 ... Q02PA2 37386135
    769889 8ac7:B (1.4) BS02 ZN 3.4.11.1 GO:0004177 ... Q02PA2 37386135
    769890 8ac7:B (1.4) BS03 ZN 3.4.11.1 GO:0004177 ... Q02PA2 37386135
    769891 8ac7:B (1.4) BS04 ZN 3.4.11.1 GO:0004177 ... Q02PA2 37386135
    769892 8ac8:A (1.6) BS01 dna ? GO:0003887 ... P03856 37713613
    769893 8ac8:C (1.6) BS01 dna ? GO:0003887 ... P03856 37713613
    769894 8ac9:A (2.351) BS01 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769895 8ac9:A (2.351) BS02 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769896 8ac9:A (2.351) BS03 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769897 8ac9:A (2.351) BS04 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769898 8ac9:B (2.351) BS01 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769899 8ac9:B (2.351) BS02 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769900 8ac9:B (2.351) BS03 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769901 8aca:A (2.54) BS01 CU ? N/A Q9RWM2 36502921
    769902 8aca:B (2.54) BS01 CU ? N/A Q9RWM2 36502921
    769903 8aca:C (2.54) BS01 CU ? N/A Q9RWM2 36502921
    769904 8acb:A (2.6) BS01 rna 3.4.22.44
    3.4.22.45
    GO:0019028 ... A0A0Y0I2B8 37076658
    769905 8acc:A (2.9) BS01 rna ? GO:0019028 ... Q599X9 37076658
    769906 8acd:A (1.39) BS01 LQ6 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 36107752
    769907 8acf:H (1.8) BS01 CA N/A N/A N/A N/A
    769908 8acg:A (2.84) BS01 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769909 8acg:A (2.84) BS02 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769910 8acg:A (2.84) BS03 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769911 8acg:A (2.84) BS04 MG 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769912 8acg:B (2.84) BS01 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769913 8acg:B (2.84) BS02 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769914 8acg:B (2.84) BS03 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769915 8acg:C (2.84) BS01 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769916 8acg:C (2.84) BS02 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769917 8acg:C (2.84) BS03 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769918 8acg:D (2.84) BS01 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769919 8acg:D (2.84) BS02 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769920 8acg:D (2.84) BS03 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769921 8acg:D (2.84) BS04 MG 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769922 8acg:E (2.84) BS01 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769923 8acg:E (2.84) BS02 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769924 8acg:E (2.84) BS03 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769925 8acg:F (2.84) BS01 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769926 8acg:F (2.84) BS02 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769927 8acg:F (2.84) BS03 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769928 8acg:F (2.84) BS04 MG 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769929 8aci:H (1.85) BS01 CA N/A N/A N/A N/A
    769930 8ack:A (1.784) BS01 peptide 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769931 8ack:A (1.784) BS02 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769932 8ack:A (1.784) BS03 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769933 8ack:A (1.784) BS04 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769934 8ack:A (1.784) BS05 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769935 8ack:B (1.784) BS01 peptide 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769936 8ack:B (1.784) BS02 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769937 8ack:B (1.784) BS03 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769938 8ack:B (1.784) BS04 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769939 8acl:A (1.4) BS01 LQL 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 36107752
    769940 8acm:AAA (2.14) BS01 MG 2.7.11.24 GO:0000077 ... P47811 N/A
    769941 8acm:AAA (2.14) BS02 MG 2.7.11.24 GO:0000077 ... P47811 N/A
    769942 8acm:AAA (2.14) BS03 MG 2.7.11.24 GO:0000077 ... P47811 N/A
    769943 8acm:AAA (2.14) BS04 SB2 2.7.11.24 GO:0000077 ... P47811 N/A
    769944 8acn:A (2.0) BS01 SF4 4.2.1.3 GO:0003994 ... P20004 1547214
    769945 8acn:A (2.0) BS02 NIC 4.2.1.3 GO:0003994 ... P20004 1547214
    769946 8aco:AAA (2.65) BS01 SB2 2.7.11.24 GO:0000077 ... P47811 N/A
    769947 8aco:AAA (2.65) BS02 MG 2.7.11.24 GO:0000077 ... P47811 N/A
    769948 8acp:C (4.5) BS01 peptide 2.7.7.6 GO:0000345 ... P0A8V2 36220101
    769949 8acp:C (4.5) BS02 dna 2.7.7.6 GO:0000345 ... P0A8V2 36220101
    769950 8acp:C (4.5) BS03 rna 2.7.7.6 GO:0000345 ... P0A8V2 36220101
    769951 8acp:C (4.5) BS04 dna 2.7.7.6 GO:0000345 ... P0A8V2 36220101
    769952 8acp:D (4.5) BS01 peptide 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    769953 8acp:D (4.5) BS02 rna 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    769954 8acp:D (4.5) BS03 MG 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    769955 8acp:D (4.5) BS04 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    769956 8acp:D (4.5) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36220101
    769957 8acq:A (2.54) BS01 JPI ? N/A Q9RRB6 36502921
    769958 8acq:A (2.54) BS02 JQ6 ? N/A Q9RRB6 36502921
    769959 8acq:A (2.54) BS03 JPX ? N/A Q9RRB6 36502921
    769960 8acq:A (2.54) BS04 CU ? N/A Q9RRB6 36502921
    769961 8acq:A (2.54) BS05 CU ? N/A Q9RRB6 36502921
    769962 8acq:A (2.54) BS06 CU ? N/A Q9RRB6 36502921
    769963 8acq:A (2.54) BS07 FE ? N/A Q9RRB6 36502921
    769964 8acq:A (2.54) BS08 JPX ? N/A Q9RRB6 36502921
    769965 8acq:B (2.54) BS01 JPX ? N/A Q9RRB6 36502921
    769966 8acq:B (2.54) BS02 JPI ? N/A Q9RRB6 36502921
    769967 8acq:B (2.54) BS03 JPX ? N/A Q9RRB6 36502921
    769968 8acq:B (2.54) BS04 JQ6 ? N/A Q9RRB6 36502921
    769969 8acq:B (2.54) BS05 CU ? N/A Q9RRB6 36502921
    769970 8acq:B (2.54) BS06 CU ? N/A Q9RRB6 36502921
    769971 8acq:B (2.54) BS07 CU ? N/A Q9RRB6 36502921
    769972 8acq:B (2.54) BS08 FE ? N/A Q9RRB6 36502921
    769973 8acq:C (2.54) BS01 JPX ? N/A Q9RRB6 36502921
    769974 8acq:C (2.54) BS02 JPX ? N/A Q9RRB6 36502921
    769975 8acq:C (2.54) BS03 JPI ? N/A Q9RRB6 36502921
    769976 8acq:C (2.54) BS04 JQ6 ? N/A Q9RRB6 36502921
    769977 8acq:C (2.54) BS05 CU ? N/A Q9RRB6 36502921
    769978 8acq:C (2.54) BS06 CU ? N/A Q9RRB6 36502921
    769979 8acq:C (2.54) BS07 CU ? N/A Q9RRB6 36502921
    769980 8acq:C (2.54) BS08 FE ? N/A Q9RRB6 36502921
    769981 8acq:H (2.54) BS01 CU ? N/A Q9RWM2 36502921
    769982 8acq:I (2.54) BS01 CU ? N/A Q9RWM2 36502921
    769983 8acq:L (2.54) BS01 CU ? N/A Q9RWM2 36502921
    769984 8acr:A (2.1) BS01 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769985 8acr:A (2.1) BS02 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769986 8acr:A (2.1) BS03 ZN 3.4.11.1 GO:0004177 ... Q9HZQ8 37386135
    769987 8acs:A (2.5) BS01 FAD ? GO:0004497 ... A0A290WZ30 36970468
    769988 8acs:B (2.5) BS01 FAD ? GO:0004497 ... A0A290WZ30 36970468
    769989 8acs:C (2.5) BS01 FAD ? GO:0004497 ... A0A290WZ30 36970468
    769990 8acs:D (2.5) BS01 FAD ? GO:0004497 ... A0A290WZ30 36970468
    769991 8act:A (3.6) BS01 ADP ? GO:0003774 ... P12883 37258552
    769992 8act:B (3.6) BS01 ADP ? GO:0003774 ... P12883 37258552
    769993 8act:B (3.6) BS02 MG ? GO:0003774 ... P12883 37258552
    769994 8acu:A (2.97) BS01 MN 2.7.6.5 GO:0015969 ... O54408 N/A
    769995 8acu:B (2.97) BS01 MN 2.7.6.5 GO:0015969 ... O54408 N/A
    769996 8acv:A (2.26) BS01 AKG ? N/A A0A075X7C6 N/A
    769997 8acv:A (2.26) BS02 ZN ? N/A A0A075X7C6 N/A
    769998 8acv:B (2.26) BS01 AKG ? N/A A0A075X7C6 N/A
    769999 8acv:B (2.26) BS02 ZN ? N/A A0A075X7C6 N/A
    770000 8acw:B (3.4) BS01 FMN 7.2.1.1 GO:0005886 ... A5F5X0 37710014

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).