SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    770201 8afi:A (2.66) BS01 peptide ? GO:0000045 ... O95166 37252361
    770202 8afi:C (2.66) BS01 peptide ? GO:0000045 ... O95166 37252361
    770203 8afi:E (2.66) BS01 peptide ? GO:0000045 ... O95166 37252361
    770204 8afi:G (2.66) BS01 peptide ? GO:0000045 ... O95166 37252361
    770205 8afi:I (2.66) BS01 peptide ? GO:0000045 ... O95166 37252361
    770206 8afi:K (2.66) BS01 peptide ? GO:0000045 ... O95166 37252361
    770207 8afi:M (2.66) BS01 peptide ? GO:0000045 ... O95166 37252361
    770208 8afi:O (2.66) BS01 peptide ? GO:0000045 ... O95166 37252361
    770209 8afj:A (1.6) BS01 FE ? GO:0006400 ... A0A179QS89 N/A
    770210 8afj:A (1.6) BS02 FE ? GO:0006400 ... A0A179QS89 N/A
    770211 8afj:B (1.6) BS01 FE ? GO:0006400 ... A0A179QS89 N/A
    770212 8afj:B (1.6) BS02 FE ? GO:0006400 ... A0A179QS89 N/A
    770213 8afj:B (1.6) BS03 CA ? GO:0006400 ... A0A179QS89 N/A
    770214 8afj:B (1.6) BS04 CA ? GO:0006400 ... A0A179QS89 N/A
    770215 8afn:A (1.36) BS01 peptide ? GO:0001836 ... P31947 37252362
    770216 8afn:A (1.36) BS02 O6C ? GO:0001836 ... P31947 37252362
    770217 8afr:A (2.15) BS01 peptide 2.7.11.1 GO:0004672 ... P11309 36410167
    770218 8afr:A (2.15) BS02 M0F 2.7.11.1 GO:0004672 ... P11309 36410167
    770219 8afz:B (10.0) BS01 peptide ? GO:0001726 ... Q9Y5X3 37322239
    770220 8ag0:B (2.7) BS01 BGC ? GO:0002039 ... O43715
    P0AEX9
    36309326
    770221 8ag0:B (2.7) BS02 GLC ? GO:0002039 ... O43715
    P0AEX9
    36309326
    770222 8ag2:A (1.025) BS01 M1I ? GO:0006357 ... Q12830 36649575
    770223 8ag6:A (2.8) BS01 dna ? GO:0000287 ... P43246 36715327
    770224 8ag6:A (2.8) BS02 dna ? GO:0000287 ... P43246 36715327
    770225 8ag6:A (2.8) BS03 ADP ? GO:0000287 ... P43246 36715327
    770226 8ag6:B (2.8) BS01 dna ? GO:0000287 ... P52701 36715327
    770227 8ag6:B (2.8) BS02 dna ? GO:0000287 ... P52701 36715327
    770228 8agb:A (3.0) BS01 CPL 2.4.99.18 GO:0004576 ... P39007 36435935
    770229 8agb:A (3.0) BS02 ELU 2.4.99.18 GO:0004576 ... P39007 36435935
    770230 8agb:B (3.0) BS01 CPL ? GO:0005515 ... Q99380 36435935
    770231 8agb:C (3.0) BS01 CPL ? GO:0005198 ... Q92316 36435935
    770232 8agb:D (3.0) BS01 GLC ? GO:0003674 ... P46964 36435935
    770233 8agb:D (3.0) BS02 GLC ? GO:0003674 ... P46964 36435935
    770234 8agb:E (3.0) BS01 CPL ? GO:0009101 ... P41543 36435935
    770235 8agb:F (3.0) BS01 MAN ? GO:0008250 ... Q02795 36435935
    770236 8agb:F (3.0) BS02 CPL ? GO:0008250 ... Q02795 36435935
    770237 8agc:A (3.1) BS01 peptide 2.4.99.18 GO:0004576 ... P39007 36435935
    770238 8agc:A (3.1) BS02 ELU 2.4.99.18 GO:0004576 ... P39007 36435935
    770239 8agc:A (3.1) BS03 CPL 2.4.99.18 GO:0004576 ... P39007 36435935
    770240 8agc:A (3.1) BS04 MG 2.4.99.18 GO:0004576 ... P39007 36435935
    770241 8agc:A (3.1) BS05 323 2.4.99.18 GO:0004576 ... P39007 36435935
    770242 8agc:C (3.1) BS01 CPL ? GO:0005198 ... Q92316 36435935
    770243 8agc:D (3.1) BS01 GLC ? GO:0003674 ... P46964 36435935
    770244 8agc:E (3.1) BS01 CPL ? GO:0009101 ... P41543 36435935
    770245 8agc:F (3.1) BS01 CPL ? GO:0008250 ... Q02795 36435935
    770246 8agd:A (3.5) BS01 JPI ? N/A Q9RRB6 36502921
    770247 8agd:A (3.5) BS02 JQ6 ? N/A Q9RRB6 36502921
    770248 8agd:A (3.5) BS03 JPX ? N/A Q9RRB6 36502921
    770249 8agd:A (3.5) BS04 CU ? N/A Q9RRB6 36502921
    770250 8agd:A (3.5) BS05 CU ? N/A Q9RRB6 36502921
    770251 8agd:A (3.5) BS06 CU ? N/A Q9RRB6 36502921
    770252 8agd:A (3.5) BS07 FE ? N/A Q9RRB6 36502921
    770253 8agd:A (3.5) BS08 JPX ? N/A Q9RRB6 36502921
    770254 8agd:B (3.5) BS01 JPX ? N/A Q9RRB6 36502921
    770255 8agd:B (3.5) BS02 JPI ? N/A Q9RRB6 36502921
    770256 8agd:B (3.5) BS03 JPX ? N/A Q9RRB6 36502921
    770257 8agd:B (3.5) BS04 JQ6 ? N/A Q9RRB6 36502921
    770258 8agd:B (3.5) BS05 CU ? N/A Q9RRB6 36502921
    770259 8agd:B (3.5) BS06 CU ? N/A Q9RRB6 36502921
    770260 8agd:B (3.5) BS07 CU ? N/A Q9RRB6 36502921
    770261 8agd:B (3.5) BS08 FE ? N/A Q9RRB6 36502921
    770262 8agd:C (3.5) BS01 JPX ? N/A Q9RRB6 36502921
    770263 8agd:C (3.5) BS02 JPX ? N/A Q9RRB6 36502921
    770264 8agd:C (3.5) BS03 JPI ? N/A Q9RRB6 36502921
    770265 8agd:C (3.5) BS04 JQ6 ? N/A Q9RRB6 36502921
    770266 8agd:C (3.5) BS05 CU ? N/A Q9RRB6 36502921
    770267 8agd:C (3.5) BS06 CU ? N/A Q9RRB6 36502921
    770268 8agd:C (3.5) BS07 CU ? N/A Q9RRB6 36502921
    770269 8agd:C (3.5) BS08 FE ? N/A Q9RRB6 36502921
    770270 8agd:H (3.5) BS01 CU ? N/A Q9RWM2 36502921
    770271 8agd:I (3.5) BS01 CU ? N/A Q9RWM2 36502921
    770272 8agd:L (3.5) BS01 CU ? N/A Q9RWM2 36502921
    770273 8age:A (2.8) BS01 peptide 2.4.99.18 GO:0004576 ... P39007 36435935
    770274 8age:A (2.8) BS02 CPL 2.4.99.18 GO:0004576 ... P39007 36435935
    770275 8age:A (2.8) BS03 MG 2.4.99.18 GO:0004576 ... P39007 36435935
    770276 8age:A (2.8) BS04 KZB 2.4.99.18 GO:0004576 ... P39007 36435935
    770277 8age:A (2.8) BS05 KZB 2.4.99.18 GO:0004576 ... P39007 36435935
    770278 8age:A (2.8) BS06 CPL 2.4.99.18 GO:0004576 ... P39007 36435935
    770279 8age:A (2.8) BS07 CPL 2.4.99.18 GO:0004576 ... P39007 36435935
    770280 8age:A (2.8) BS08 323 2.4.99.18 GO:0004576 ... P39007 36435935
    770281 8age:B (2.8) BS01 CPL ? GO:0005515 ... Q99380 36435935
    770282 8age:C (2.8) BS01 CPL ? GO:0005198 ... Q92316 36435935
    770283 8age:E (2.8) BS01 CPL ? GO:0009101 ... P41543 36435935
    770284 8age:F (2.8) BS01 CPL ? GO:0008250 ... Q02795 36435935
    770285 8age:G (2.8) BS01 KZB ? GO:0005789 ... P33767 36435935
    770286 8agg:A (3.6) BS01 MG 3.1.3.- GO:0005576 ... Q5ZXN5 37076474
    770287 8agi:A (2.1) BS01 M0U 3.6.4.10 GO:0005524 ... P07900 36012721
    770288 8agi:B (2.1) BS01 M0U 3.6.4.10 GO:0005524 ... P07900 36012721
    770289 8agi:B (2.1) BS02 M0U 3.6.4.10 GO:0005524 ... P07900 36012721
    770290 8agj:A (2.32) BS01 M0U 3.6.4.10 GO:0005524 ... P07900 36012721
    770291 8agj:B (2.32) BS01 M0U 3.6.4.10 GO:0005524 ... P07900 36012721
    770292 8agj:B (2.32) BS02 M0U 3.6.4.10 GO:0005524 ... P07900 36012721
    770293 8agk:AAA (1.5) BS01 GAL ? GO:0005576 ... C9WWY7 36077016
    770294 8agk:AAA (1.5) BS02 SIA ? GO:0005576 ... C9WWY7 36077016
    770295 8agl:A (2.2) BS01 M0U 3.6.4.10 GO:0005524 ... P07900 36012721
    770296 8agl:B (2.2) BS01 M0U 3.6.4.10 GO:0005524 ... P07900 36012721
    770297 8agl:B (2.2) BS02 M0U 3.6.4.10 GO:0005524 ... P07900 36012721
    770298 8agm:AAA (1.966) BS01 LEO ? GO:0003824 ... N/A N/A
    770299 8agm:BBB (1.966) BS01 LEO ? GO:0003824 ... N/A N/A
    770300 8agm:BBB (1.966) BS02 LEO ? GO:0003824 ... N/A N/A
    770301 8agm:CCC (1.966) BS01 LEO ? GO:0003824 ... N/A N/A
    770302 8agm:CCC (1.966) BS02 LEO ? GO:0003824 ... N/A N/A
    770303 8agm:DDD (1.966) BS01 LEO ? GO:0003824 ... N/A N/A
    770304 8agm:DDD (1.966) BS02 LEO ? GO:0003824 ... N/A N/A
    770305 8agn:AAA (1.957) BS01 7EX ? GO:0003824 ... N/A N/A
    770306 8agn:AAA (1.957) BS02 7EX ? GO:0003824 ... N/A N/A
    770307 8agn:BBB (1.957) BS01 7EX ? GO:0003824 ... N/A N/A
    770308 8agn:BBB (1.957) BS02 7EX ? GO:0003824 ... N/A N/A
    770309 8agn:CCC (1.957) BS01 7EX ? GO:0003824 ... N/A N/A
    770310 8agn:CCC (1.957) BS02 7EX ? GO:0003824 ... N/A N/A
    770311 8agn:DDD (1.957) BS01 7EX ? GO:0003824 ... N/A N/A
    770312 8agn:DDD (1.957) BS02 7EX ? GO:0003824 ... N/A N/A
    770313 8agp:AAA (1.49) BS01 M1U ? GO:0003824 ... N/A N/A
    770314 8agp:AAA (1.49) BS02 M1U ? GO:0003824 ... N/A N/A
    770315 8agp:BBB (1.49) BS01 M1U ? GO:0003824 ... N/A N/A
    770316 8agp:BBB (1.49) BS02 M1U ? GO:0003824 ... N/A N/A
    770317 8agq:A (1.093) BS01 GSH 2.5.1.18 GO:0004364 ... B9MWW0 37881531
    770318 8agq:A (1.093) BS02 M5O 2.5.1.18 GO:0004364 ... B9MWW0 37881531
    770319 8ags:AAA (1.61) BS01 2CH ? GO:0003824 ... N/A N/A
    770320 8ags:BBB (1.61) BS01 2CH ? GO:0003824 ... N/A N/A
    770321 8agt:0 (2.6) BS01 rna ? GO:0000027 ... P05317 36804914
    770322 8agt:A (2.6) BS01 rna ? GO:0000470 ... P05748 36804914
    770323 8agt:A (2.6) BS02 rna ? GO:0000470 ... P05748 36804914
    770324 8agt:B (2.6) BS01 rna ? GO:0000470 ... P26784 36804914
    770325 8agt:C (2.6) BS01 rna ? GO:0000448 ... P05740 36804914
    770326 8agt:C (2.6) BS02 rna ? GO:0000448 ... P05740 36804914
    770327 8agt:D (2.6) BS01 rna ? GO:0002181 ... P0CX49 36804914
    770328 8agt:E (2.6) BS01 rna ? GO:0002181 ... P0CX82 36804914
    770329 8agt:F (2.6) BS01 rna ? GO:0002181 ... P0CX23 36804914
    770330 8agt:F (2.6) BS02 rna ? GO:0002181 ... P0CX23 36804914
    770331 8agt:G (2.6) BS01 rna ? GO:0002181 ... Q02753 36804914
    770332 8agt:G (2.6) BS02 rna ? GO:0002181 ... Q02753 36804914
    770333 8agt:H (2.6) BS01 rna ? GO:0002181 ... P05749 36804914
    770334 8agt:I (2.6) BS01 rna ? GO:0002181 ... P0CX41 36804914
    770335 8agt:J (2.6) BS01 rna ? GO:0002181 ... P04449 36804914
    770336 8agt:K (2.6) BS01 rna ? GO:0000027 ... P04456 36804914
    770337 8agt:K (2.6) BS02 rna ? GO:0000027 ... P04456 36804914
    770338 8agt:L (2.6) BS01 rna ? GO:0002181 ... P05743 36804914
    770339 8agt:L (2.6) BS02 rna ? GO:0002181 ... P05743 36804914
    770340 8agt:M (2.6) BS01 rna ? GO:0002181 ... P0C2H6 36804914
    770341 8agt:N (2.6) BS01 rna ? GO:0002181 ... P02406 36804914
    770342 8agt:O (2.6) BS01 rna ? GO:0002181 ... P05747 36804914
    770343 8agt:P (2.6) BS01 rna ? GO:0002181 ... P14120 36804914
    770344 8agt:Q (2.6) BS01 rna ? GO:0002181 ... P0C2H8 36804914
    770345 8agt:R (2.6) BS01 rna ? GO:0002181 ... P38061 36804914
    770346 8agt:R (2.6) BS02 MG ? GO:0002181 ... P38061 36804914
    770347 8agt:S (2.6) BS01 rna ? GO:0000027 ... P05744 36804914
    770348 8agt:T (2.6) BS01 rna ? GO:0002181 ... P87262 36804914
    770349 8agt:T (2.6) BS02 ZN ? GO:0002181 ... P87262 36804914
    770350 8agt:U (2.6) BS01 rna ? GO:0000463 ... P0CX84 36804914
    770351 8agt:U (2.6) BS02 rna ? GO:0000463 ... P0CX84 36804914
    770352 8agt:V (2.6) BS01 rna ? GO:0000470 ... P05745 36804914
    770353 8agt:W (2.6) BS01 rna ? GO:0000448 ... P49166 36804914
    770354 8agt:W (2.6) BS02 rna ? GO:0000448 ... P49166 36804914
    770355 8agt:W (2.6) BS03 ZN ? GO:0000448 ... P49166 36804914
    770356 8agt:X (2.6) BS01 rna ? GO:0002181 ... P49167 36804914
    770357 8agt:Y (2.6) BS01 rna ? GO:0002181 ... P04650 36804914
    770358 8agt:Y (2.6) BS02 rna ? GO:0002181 ... P04650 36804914
    770359 8agt:Z (2.6) BS01 rna ? GO:0000027 ... P0CH08 36804914
    770360 8agt:Z (2.6) BS02 ZN ? GO:0000027 ... P0CH08 36804914
    770361 8agt:a (2.6) BS01 rna ? GO:0000049 ... Q12532 36804914
    770362 8agt:a (2.6) BS02 rna ? GO:0000049 ... Q12532 36804914
    770363 8agt:a (2.6) BS03 rna ? GO:0000049 ... Q12532 36804914
    770364 8agt:b (2.6) BS01 rna ? GO:0002181 ... P0CX27 36804914
    770365 8agt:b (2.6) BS02 ZN ? GO:0002181 ... P0CX27 36804914
    770366 8agt:c (2.6) BS01 rna ? GO:0002181 ... P0CX25 36804914
    770367 8agt:c (2.6) BS02 ZN ? GO:0002181 ... P0CX25 36804914
    770368 8agt:e (2.6) BS01 rna 2.3.2.27 GO:0000781 ... Q04781 36804914
    770369 8agt:e (2.6) BS02 ZN 2.3.2.27 GO:0000781 ... Q04781 36804914
    770370 8agt:e (2.6) BS03 ZN 2.3.2.27 GO:0000781 ... Q04781 36804914
    770371 8agt:g (2.6) BS01 rna ? GO:0000054 ... Q12522 36804914
    770372 8agt:j (2.6) BS01 rna ? GO:0002181 ... P0CX45 36804914
    770373 8agt:j (2.6) BS02 MG ? GO:0002181 ... P0CX45 36804914
    770374 8agt:k (2.6) BS01 rna ? GO:0000027 ... P14126 36804914
    770375 8agt:k (2.6) BS02 MG ? GO:0000027 ... P14126 36804914
    770376 8agt:l (2.6) BS01 rna ? GO:0002181 ... P10664 36804914
    770377 8agt:l (2.6) BS02 rna ? GO:0002181 ... P10664 36804914
    770378 8agt:m (2.6) BS01 rna ? GO:0000027 ... P26321 36804914
    770379 8agt:m (2.6) BS02 rna ? GO:0000027 ... P26321 36804914
    770380 8agt:n (2.6) BS01 rna ? GO:0000027 ... P05739 36804914
    770381 8agt:o (2.6) BS01 rna ? GO:0000463 ... P05737 36804914
    770382 8agt:o (2.6) BS02 rna ? GO:0000463 ... P05737 36804914
    770383 8agt:p (2.6) BS01 rna ? GO:0000470 ... P17076 36804914
    770384 8agt:p (2.6) BS02 rna ? GO:0000470 ... P17076 36804914
    770385 8agt:q (2.6) BS01 rna ? GO:0002181 ... P05738 36804914
    770386 8agt:r (2.6) BS01 rna ? GO:0000027 ... P41805 36804914
    770387 8agt:r (2.6) BS02 rna ? GO:0000027 ... P41805 36804914
    770388 8agt:r (2.6) BS03 rna ? GO:0000027 ... P41805 36804914
    770389 8agt:r (2.6) BS04 rna ? GO:0000027 ... P41805 36804914
    770390 8agt:s (2.6) BS01 rna ? GO:0000027 ... P0C0W9 36804914
    770391 8agt:s (2.6) BS02 rna ? GO:0000027 ... P0C0W9 36804914
    770392 8agt:t (2.6) BS01 rna ? GO:0002181 ... Q12690 36804914
    770393 8agt:t (2.6) BS02 rna ? GO:0002181 ... Q12690 36804914
    770394 8agt:u (2.6) BS01 rna ? GO:0000027 ... P36105 36804914
    770395 8agt:v (2.6) BS01 rna ? GO:0002182 ... P23301 36804914
    770396 8agt:w (2.6) BS01 rna ? GO:0000055 ... P0CX43 36804914
    770397 8agt:z (2.6) BS01 rna ? GO:0000027 ... P0CX53 36804914
    770398 8agu:0 (2.7) BS01 rna ? GO:0000027 ... P05317 36804914
    770399 8agu:A (2.7) BS01 rna ? GO:0000470 ... P05748 36804914
    770400 8agu:A (2.7) BS02 rna ? GO:0000470 ... P05748 36804914

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).