SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 3842 3843 3844 3845 3846 3847 3848 3849 3850 3851 3852 3853 3854 3855 3856 3857 3858 3859 3860 3861 3862 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    770201 8azw:V (2.14) BS03 ZN ? GO:0003723 ... A0A1S4DN51 37156858
    770202 8azw:W (2.14) BS01 rna ? GO:0003735 ... A0A1S4C4G8 37156858
    770203 8azw:X (2.14) BS01 rna ? GO:0003735 ... A0A1S3YR32 37156858
    770204 8azw:X (2.14) BS02 rna ? GO:0003735 ... A0A1S3YR32 37156858
    770205 8azw:Y (2.14) BS01 rna N/A GO:0003735 ... N/A 37156858
    770206 8azw:Y (2.14) BS02 ZN N/A GO:0003735 ... N/A 37156858
    770207 8azw:Z (2.14) BS01 rna ? GO:0003735 ... A0A1S4AVP7 37156858
    770208 8azw:Z (2.14) BS02 ZN ? GO:0003735 ... A0A1S4AVP7 37156858
    770209 8azw:a (2.14) BS01 rna ? GO:0003735 ... A0A1S3X5Y9 37156858
    770210 8azw:a (2.14) BS02 ZN ? GO:0003735 ... A0A1S3X5Y9 37156858
    770211 8azw:b (2.14) BS01 rna ? GO:0002181 ... A0A1S4B0G2 37156858
    770212 8azw:c (2.14) BS01 rna ? GO:0000470 ... A0A1S4D668 37156858
    770213 8azw:c (2.14) BS02 rna ? GO:0000470 ... A0A1S4D668 37156858
    770214 8azw:d (2.14) BS01 rna ? GO:0003729 ... A0A1S4DN49 37156858
    770215 8azw:e (2.14) BS01 rna ? GO:0003735 ... A0A1S3XSQ1 37156858
    770216 8azw:f (2.14) BS01 rna ? GO:0003729 ... A0A1S4BFD5 37156858
    770217 8azw:g (2.14) BS01 rna ? GO:0003735 ... A0A1S3Z2D7 37156858
    770218 8azw:g (2.14) BS02 rna ? GO:0003735 ... A0A1S3Z2D7 37156858
    770219 8azw:h (2.14) BS01 rna ? GO:0000027 ... A0A1S3XE16 37156858
    770220 8azw:h (2.14) BS02 rna ? GO:0000027 ... A0A1S3XE16 37156858
    770221 8azw:j (2.14) BS01 rna ? GO:0002181 ... A0A1S4CCH0 37156858
    770222 8azw:j (2.14) BS02 rna ? GO:0002181 ... A0A1S4CCH0 37156858
    770223 8azw:k (2.14) BS01 rna ? GO:0003729 ... Q07761 37156858
    770224 8azw:k (2.14) BS02 rna ? GO:0003729 ... Q07761 37156858
    770225 8azw:m (2.14) BS01 rna ? GO:0002181 ... A0A1S4DPM5 37156858
    770226 8azw:m (2.14) BS02 rna ? GO:0002181 ... A0A1S4DPM5 37156858
    770227 8azw:n (2.14) BS01 rna ? GO:0000463 ... A0A1S3WY31 37156858
    770228 8azw:n (2.14) BS02 rna ? GO:0000463 ... A0A1S3WY31 37156858
    770229 8azw:o (2.14) BS01 rna ? GO:0002181 ... A0A1S3XXQ5 37156858
    770230 8azw:q (2.14) BS01 rna ? GO:0000463 ... A0A1S4A5Z2 37156858
    770231 8azw:q (2.14) BS02 rna ? GO:0000463 ... A0A1S4A5Z2 37156858
    770232 8azw:q (2.14) BS03 MG ? GO:0000463 ... A0A1S4A5Z2 37156858
    770233 8azw:r (2.14) BS01 rna ? GO:0003723 ... A0A1S3ZLI9 37156858
    770234 8azw:s (2.14) BS01 rna ? GO:0003723 ... A0A1S3X0M5 37156858
    770235 8azw:s (2.14) BS02 rna ? GO:0003723 ... A0A1S3X0M5 37156858
    770236 8azw:t (2.14) BS01 rna ? GO:0003723 ... A0A1S3XAW1 37156858
    770237 8azw:t (2.14) BS02 rna ? GO:0003723 ... A0A1S3XAW1 37156858
    770238 8azw:u (2.14) BS01 rna ? GO:0002181 ... A0A1S4C068 37156858
    770239 8azx:A (1.04) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 37258666
    770240 8azx:A (1.04) BS02 OFU 3.6.5.2 GO:0003924 ... P01116 37258666
    770241 8azy:A (1.09) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 37258666
    770242 8azy:A (1.09) BS02 OFU 3.6.5.2 GO:0003924 ... P01116 37258666
    770243 8azz:A (1.02) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 37258666
    770244 8azz:A (1.02) BS02 OFU 3.6.5.2 GO:0003924 ... P01116 37258666
    770245 8b00:A (1.04) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 37258666
    770246 8b00:A (1.04) BS02 OFU 3.6.5.2 GO:0003924 ... P01116 37258666
    770247 8b01:B (3.03) BS01 NA ? GO:0005886 ... Q6LPW1 36849793
    770248 8b01:B (3.03) BS02 NA ? GO:0005886 ... Q6LPW1 36849793
    770249 8b03:B (2.22) BS01 PLP 4.2.1.20 GO:0000162 ... P0A2K1 37185266
    770250 8b04:A (1.6) BS01 OU0 3.4.21.36 GO:0004252 ... P00772 N/A
    770251 8b04:A (1.6) BS02 CA 3.4.21.36 GO:0004252 ... P00772 N/A
    770252 8b05:B (2.1) BS01 PLS 4.2.1.20 GO:0000162 ... P0A2K1 37185266
    770253 8b05:B (2.1) BS02 IND 4.2.1.20 GO:0000162 ... P0A2K1 37185266
    770254 8b06:B (2.49) BS01 PLP 4.2.1.20 GO:0000162 ... P0A2K1 37185266
    770255 8b06:B (2.49) BS02 SER 4.2.1.20 GO:0000162 ... P0A2K1 37185266
    770256 8b07:A (2.05) BS01 SFG 2.1.1.57 GO:0003746 ... A0A7H0DN74 37080993
    770257 8b07:B (2.05) BS01 SFG 2.1.1.57 GO:0003746 ... A0A7H0DN74 37080993
    770258 8b08:A (2.5) BS01 G3P 4.2.1.20 GO:0000162 ... P00929 37185266
    770259 8b08:B (2.5) BS01 PLS 4.2.1.20 GO:0000162 ... P0A2K1 37185266
    770260 8b0a:A (3.0) BS01 dna ? GO:0000786 ... P84233 38307862
    770261 8b0a:A (3.0) BS02 dna ? GO:0000786 ... P84233 38307862
    770262 8b0a:B (3.0) BS01 dna ? GO:0000786 ... P62799 38307862
    770263 8b0a:B (3.0) BS02 dna ? GO:0000786 ... P62799 38307862
    770264 8b0a:C (3.0) BS01 dna ? GO:0000786 ... P06897 38307862
    770265 8b0a:C (3.0) BS02 dna ? GO:0000786 ... P06897 38307862
    770266 8b0a:D (3.0) BS01 dna ? GO:0000786 ... P02281 38307862
    770267 8b0a:D (3.0) BS02 dna ? GO:0000786 ... P02281 38307862
    770268 8b0a:E (3.0) BS01 dna ? GO:0000786 ... P84233 38307862
    770269 8b0a:E (3.0) BS02 dna ? GO:0000786 ... P84233 38307862
    770270 8b0a:F (3.0) BS01 dna ? GO:0000786 ... P62799 38307862
    770271 8b0a:F (3.0) BS02 dna ? GO:0000786 ... P62799 38307862
    770272 8b0a:G (3.0) BS01 dna ? GO:0000786 ... P06897 38307862
    770273 8b0a:G (3.0) BS02 dna ? GO:0000786 ... P06897 38307862
    770274 8b0a:H (3.0) BS01 dna ? GO:0000786 ... P02281 38307862
    770275 8b0a:H (3.0) BS02 dna ? GO:0000786 ... P02281 38307862
    770276 8b0a:K (3.0) BS01 dna 3.6.4.- GO:0000166 ... Q86WJ1 38307862
    770277 8b0a:K (3.0) BS02 dna 3.6.4.- GO:0000166 ... Q86WJ1 38307862
    770278 8b0b:AAA (1.95) BS01 OUU 3.2.1.166 GO:0016020 ... Q9Y251 36533564
    770279 8b0b:BBB (1.95) BS01 OUU 3.2.1.166 N/A Q9Y251 36533564
    770280 8b0c:AAA (2.1) BS01 OV3 3.2.1.166 GO:0016020 ... Q9Y251 36533564
    770281 8b0c:BBB (2.1) BS01 OV3 3.2.1.166 N/A Q9Y251 36533564
    770282 8b0d:AAA (1.62) BS01 ALA ? GO:0016020 ... C1F2K5 36533564
    770283 8b0d:AAA (1.62) BS02 OUU ? GO:0016020 ... C1F2K5 36533564
    770284 8b0e:AAA (1.55) BS01 OV3 ? GO:0016020 ... C1F2K5 36533564
    770285 8b0f:D (3.0) BS01 CA ? GO:0005579 ... P07358 36797260
    770286 8b0f:E (3.0) BS01 CA ? GO:0005579 ... P07357 36797260
    770287 8b0i:A (4.28) BS01 rna ? GO:0003723 ... P0A894 36504162
    770288 8b0i:B (4.28) BS01 rna ? GO:0003723 ... P0A894 36504162
    770289 8b0i:C (4.28) BS01 rna ? GO:0003723 ... P0A894 36504162
    770290 8b0i:D (4.28) BS01 rna ? GO:0003723 ... P0A894 36504162
    770291 8b0j:A (3.99) BS01 rna ? GO:0003723 ... P0A894 36504162
    770292 8b0j:B (3.99) BS01 rna ? GO:0003723 ... P0A894 36504162
    770293 8b0j:C (3.99) BS01 rna ? GO:0003723 ... P0A894 36504162
    770294 8b0j:D (3.99) BS01 rna ? GO:0003723 ... P0A894 36504162
    770295 8b0j:L (3.99) BS01 rna 3.1.26.12 GO:0003676 ... P21513 36504162
    770296 8b0n:A (2.67) BS01 OU9 2.3.1.269 GO:0005515 ... P23930 37390210
    770297 8b0o:A (3.02) BS01 OJF 2.3.1.269 GO:0005515 ... P23930 37390210
    770298 8b0p:A (2.86) BS01 peptide 2.3.1.269 GO:0005515 ... P23930 37390210
    770299 8b0p:A (2.86) BS02 IG7 2.3.1.269 GO:0005515 ... P23930 37390210
    770300 8b0r:A (2.2) BS01 rna N/A N/A N/A 36423657
    770301 8b0s:A (2.42) BS01 AU 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 36421689
    770302 8b0t:A (2.4) BS01 AU 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 36421689
    770303 8b0t:A (2.4) BS02 AU 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 36421689
    770304 8b0v:A (1.7) BS01 CA 3.4.21.88 GO:0003677 ... P37452 N/A
    770305 8b0v:B (1.7) BS01 CA 3.4.21.88 GO:0003677 ... P37452 N/A
    770306 8b0w:A (1.53) BS01 OVD ? GO:0002317 ... P09382 N/A
    770307 8b0w:B (1.53) BS01 OVD ? GO:0002317 ... P09382 N/A
    770308 8b0x:0 (1.55) BS01 rna ? GO:0000027 ... P0A7N9 36841832
    770309 8b0x:1 (1.55) BS01 rna ? GO:0002181 ... P0A7P5 36841832
    770310 8b0x:2 (1.55) BS01 rna ? GO:0002181 ... P0A7Q1 36841832
    770311 8b0x:3 (1.55) BS01 rna ? GO:0002181 ... P0A7Q6 36841832
    770312 8b0x:3 (1.55) BS02 ZN ? GO:0002181 ... P0A7Q6 36841832
    770313 8b0x:B (1.55) BS01 rna ? GO:0000028 ... P0A7V0 36841832
    770314 8b0x:C (1.55) BS01 rna ? GO:0000028 ... P0A7V3 36841832
    770315 8b0x:D (1.55) BS01 rna ? GO:0000028 ... P0A7V8 36841832
    770316 8b0x:E (1.55) BS01 rna ? GO:0000028 ... P0A7W1 36841832
    770317 8b0x:F (1.55) BS01 rna ? GO:0002181 ... P02358 36841832
    770318 8b0x:G (1.55) BS01 rna ? GO:0000028 ... P02359 36841832
    770319 8b0x:H (1.55) BS01 rna ? GO:0000028 ... P0A7W7 36841832
    770320 8b0x:I (1.55) BS01 rna ? GO:0000049 ... P0A7X3 36841832
    770321 8b0x:I (1.55) BS02 rna ? GO:0000049 ... P0A7X3 36841832
    770322 8b0x:J (1.55) BS01 rna ? GO:0000049 ... P0A7R5 36841832
    770323 8b0x:K (1.55) BS01 rna ? GO:0002181 ... P0A7R9 36841832
    770324 8b0x:L (1.55) BS01 rna ? GO:0000049 ... P0A7S3 36841832
    770325 8b0x:M (1.55) BS01 rna ? GO:0000049 ... P0A7S9 36841832
    770326 8b0x:M (1.55) BS02 rna ? GO:0000049 ... P0A7S9 36841832
    770327 8b0x:N (1.55) BS01 rna ? GO:0000028 ... P0AG59 36841832
    770328 8b0x:O (1.55) BS01 rna ? GO:0000028 ... P0ADZ4 36841832
    770329 8b0x:O (1.55) BS02 rna ? GO:0000028 ... P0ADZ4 36841832
    770330 8b0x:P (1.55) BS01 rna ? GO:0000028 ... P0A7T3 36841832
    770331 8b0x:Q (1.55) BS01 rna ? GO:0000028 ... P0AG63 36841832
    770332 8b0x:R (1.55) BS01 rna ? GO:0002181 ... P0A7T7 36841832
    770333 8b0x:S (1.55) BS01 rna ? GO:0000028 ... P0A7U3 36841832
    770334 8b0x:T (1.55) BS01 rna ? GO:0000028 ... P0A7U7 36841832
    770335 8b0x:U (1.55) BS01 rna ? GO:0000028 ... P68679 36841832
    770336 8b0x:c (1.55) BS01 rna ? GO:0000027 ... P60422 36841832
    770337 8b0x:d (1.55) BS01 rna ? GO:0000027 ... P60438 36841832
    770338 8b0x:e (1.55) BS01 rna ? GO:0001070 ... P60723 36841832
    770339 8b0x:f (1.55) BS01 rna ? GO:0000027 ... P62399 36841832
    770340 8b0x:f (1.55) BS02 rna ? GO:0000027 ... P62399 36841832
    770341 8b0x:f (1.55) BS03 rna ? GO:0000027 ... P62399 36841832
    770342 8b0x:g (1.55) BS01 rna ? GO:0000027 ... P0AG55 36841832
    770343 8b0x:h (1.55) BS01 rna ? GO:0002181 ... P0A7R1 36841832
    770344 8b0x:i (1.55) BS01 rna ? GO:0002181 ... P0AA10 36841832
    770345 8b0x:j (1.55) BS01 rna ? GO:0002181 ... P0ADY3 36841832
    770346 8b0x:j (1.55) BS02 rna ? GO:0002181 ... P0ADY3 36841832
    770347 8b0x:k (1.55) BS01 rna ? GO:0002181 ... P02413 36841832
    770348 8b0x:l (1.55) BS01 rna ? GO:0000027 ... P0ADY7 36841832
    770349 8b0x:l (1.55) BS02 rna ? GO:0000027 ... P0ADY7 36841832
    770350 8b0x:m (1.55) BS01 rna ? GO:0000027 ... P0AG44 36841832
    770351 8b0x:n (1.55) BS01 rna ? GO:0002181 ... P0C018 36841832
    770352 8b0x:n (1.55) BS02 rna ? GO:0002181 ... P0C018 36841832
    770353 8b0x:o (1.55) BS01 rna ? GO:0000027 ... P0A7K6 36841832
    770354 8b0x:o (1.55) BS02 rna ? GO:0000027 ... P0A7K6 36841832
    770355 8b0x:p (1.55) BS01 rna ? GO:0000027 ... P0A7L3 36841832
    770356 8b0x:q (1.55) BS01 rna ? GO:0002181 ... P0AG48 36841832
    770357 8b0x:r (1.55) BS01 rna ? GO:0002181 ... P61175 36841832
    770358 8b0x:s (1.55) BS01 rna ? GO:0000027 ... P0ADZ0 36841832
    770359 8b0x:t (1.55) BS01 rna ? GO:0000027 ... P60624 36841832
    770360 8b0x:u (1.55) BS01 rna ? GO:0000027 ... P68919 36841832
    770361 8b0x:v (1.55) BS01 rna ? GO:0000027 ... P0A7L8 36841832
    770362 8b0x:v (1.55) BS02 rna ? GO:0000027 ... P0A7L8 36841832
    770363 8b0x:w (1.55) BS01 rna ? GO:0000027 ... P0A7M2 36841832
    770364 8b0x:x (1.55) BS01 rna ? GO:0000027 ... P0A7M6 36841832
    770365 8b0x:y (1.55) BS01 rna ? GO:0000027 ... P0AG51 36841832
    770366 8b0x:y (1.55) BS02 rna ? GO:0000027 ... P0AG51 36841832
    770367 8b0x:z (1.55) BS01 rna ? GO:0000027 ... P0A7N4 36841832
    770368 8b0z:A (1.23) BS01 OV6 ? GO:0002317 ... P09382 N/A
    770369 8b0z:B (1.23) BS01 OV6 ? GO:0002317 ... P09382 N/A
    770370 8b14:A (2.6) BS01 LU9 ? GO:0009279 ... P06971 36779755
    770371 8b16:A (1.55) BS01 peptide N/A N/A N/A N/A
    770372 8b16:D (1.55) BS01 peptide N/A N/A N/A N/A
    770373 8b16:H (1.55) BS01 peptide N/A N/A N/A N/A
    770374 8b16:H (1.55) BS02 peptide N/A N/A N/A N/A
    770375 8b16:J (1.55) BS01 peptide N/A N/A N/A N/A
    770376 8b16:L (1.55) BS01 peptide N/A N/A N/A N/A
    770377 8b17:A (2.5) BS01 peptide ? GO:0005886 ... P36837 37467108
    770378 8b18:A (2.3) BS01 peptide ? GO:0005886 ... P36837 37467108
    770379 8b19:A (2.45) BS01 peptide ? GO:0005886 ... P36837 37467108
    770380 8b1a:A (2.15) BS01 peptide ? GO:0005886 ... P36837 37467108
    770381 8b1b:A (2.8) BS01 peptide ? GO:0005886 ... P36837 37467108
    770382 8b1c:A (2.56) BS01 peptide ? GO:0005886 ... P36837 37467108
    770383 8b1d:A (2.3) BS01 peptide ? GO:0005886 ... P36837 37467108
    770384 8b1e:A (2.47) BS01 peptide ? GO:0005886 ... P36837 37467108
    770385 8b1f:A (2.35) BS01 peptide ? GO:0005886 ... P36837 37467108
    770386 8b1g:A (2.5) BS01 peptide ? GO:0005886 ... P36837 37467108
    770387 8b1h:A (2.6) BS01 peptide ? GO:0005886 ... P36837 37467108
    770388 8b1i:A (2.55) BS01 peptide ? GO:0005886 ... P36837 37467108
    770389 8b1j:A (2.67) BS01 peptide ? GO:0005886 ... P36837 37467108
    770390 8b1k:A (2.8) BS01 peptide ? GO:0005886 ... P36837 37467108
    770391 8b1n:A (2.0) BS01 MG 2.1.1.228 GO:0002939 ... E4THH1 38903539
    770392 8b1n:A (2.0) BS02 SAM 2.1.1.228 GO:0002939 ... E4THH1 38903539
    770393 8b1n:A (2.0) BS03 SAM 2.1.1.228 GO:0002939 ... E4THH1 38903539
    770394 8b1n:A (2.0) BS04 SAM 2.1.1.228 GO:0002939 ... E4THH1 38903539
    770395 8b1n:B (2.0) BS01 SAM 2.1.1.228 GO:0002939 ... E4THH1 38903539
    770396 8b1n:B (2.0) BS02 MG 2.1.1.228 GO:0002939 ... E4THH1 38903539
    770397 8b1n:B (2.0) BS03 SAM 2.1.1.228 GO:0002939 ... E4THH1 38903539
    770398 8b1n:B (2.0) BS04 SAM 2.1.1.228 GO:0002939 ... E4THH1 38903539
    770399 8b1r:B (3.2) BS01 MG 3.1.11.5
    5.6.2.4
    GO:0000287 ... P08394 36533901
    770400 8b1s:A (1.6) BS01 SAL ? N/A Q5XX06 39100314

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).