SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    771001 8b64:J (2.589) BS01 BCL ? GO:0005886 ... P02950 36738736
    771002 8b64:J (2.589) BS02 SPO ? GO:0005886 ... P02950 36738736
    771003 8b64:J (2.589) BS03 SPO ? GO:0005886 ... P02950 36738736
    771004 8b64:J (2.589) BS04 BCL ? GO:0005886 ... P02950 36738736
    771005 8b64:K (2.589) BS01 BCL ? GO:0005886 ... P02950 36738736
    771006 8b64:K (2.589) BS02 SPO ? GO:0005886 ... P02950 36738736
    771007 8b64:K (2.589) BS03 BCL ? GO:0005886 ... P02950 36738736
    771008 8b64:K (2.589) BS04 SPO ? GO:0005886 ... P02950 36738736
    771009 8b64:L (2.589) BS01 BCL ? GO:0009772 ... P19057 36738736
    771010 8b64:L (2.589) BS02 BPH ? GO:0009772 ... P19057 36738736
    771011 8b64:L (2.589) BS03 U10 ? GO:0009772 ... P19057 36738736
    771012 8b64:L (2.589) BS04 U10 ? GO:0009772 ... P19057 36738736
    771013 8b64:L (2.589) BS05 BCL ? GO:0009772 ... P19057 36738736
    771014 8b64:L (2.589) BS06 FE ? GO:0009772 ... P19057 36738736
    771015 8b64:L (2.589) BS07 U10 ? GO:0009772 ... P19057 36738736
    771016 8b64:L (2.589) BS08 BCL ? GO:0009772 ... P19057 36738736
    771017 8b64:L (2.589) BS09 BPH ? GO:0009772 ... P19057 36738736
    771018 8b64:M (2.589) BS01 BPH ? GO:0009772 ... P11847 36738736
    771019 8b64:M (2.589) BS02 U10 ? GO:0009772 ... P11847 36738736
    771020 8b64:M (2.589) BS03 BCL ? GO:0009772 ... P11847 36738736
    771021 8b64:M (2.589) BS04 FE ? GO:0009772 ... P11847 36738736
    771022 8b64:M (2.589) BS05 U10 ? GO:0009772 ... P11847 36738736
    771023 8b64:M (2.589) BS06 SPO ? GO:0009772 ... P11847 36738736
    771024 8b64:M (2.589) BS07 BCL ? GO:0009772 ... P11847 36738736
    771025 8b64:M (2.589) BS08 BCL ? GO:0009772 ... P11847 36738736
    771026 8b64:M (2.589) BS09 BPH ? GO:0009772 ... P11847 36738736
    771027 8b64:N (2.589) BS01 BCL ? GO:0005886 ... P02950 36738736
    771028 8b64:N (2.589) BS02 BCL ? GO:0005886 ... P02950 36738736
    771029 8b64:N (2.589) BS03 SPO ? GO:0005886 ... P02950 36738736
    771030 8b64:N (2.589) BS04 SPO ? GO:0005886 ... P02950 36738736
    771031 8b64:O (2.589) BS01 BCL ? GO:0005886 ... P02950 36738736
    771032 8b64:O (2.589) BS02 SPO ? GO:0005886 ... P02950 36738736
    771033 8b64:O (2.589) BS03 BCL ? GO:0005886 ... P02950 36738736
    771034 8b64:O (2.589) BS04 SPO ? GO:0005886 ... P02950 36738736
    771035 8b64:R (2.589) BS01 BCL ? GO:0005886 ... P02950 36738736
    771036 8b64:R (2.589) BS02 SPO ? GO:0005886 ... P02950 36738736
    771037 8b64:R (2.589) BS03 BCL ? GO:0005886 ... P02950 36738736
    771038 8b64:R (2.589) BS04 SPO ? GO:0005886 ... P02950 36738736
    771039 8b64:S (2.589) BS01 SPO ? GO:0005886 ... P02950 36738736
    771040 8b64:S (2.589) BS02 SPO ? GO:0005886 ... P02950 36738736
    771041 8b64:S (2.589) BS03 BCL ? GO:0005886 ... P02950 36738736
    771042 8b64:S (2.589) BS04 BCL ? GO:0005886 ... P02950 36738736
    771043 8b64:T (2.589) BS01 BCL ? GO:0005886 ... P02950 36738736
    771044 8b64:T (2.589) BS02 SPO ? GO:0005886 ... P02950 36738736
    771045 8b64:T (2.589) BS03 BCL ? GO:0005886 ... P02950 36738736
    771046 8b64:X (2.589) BS01 SPO ? GO:0005886 ... P26240 36738736
    771047 8b64:a (2.589) BS01 BCL ? GO:0005886 ... P02948 36738736
    771048 8b64:a (2.589) BS02 BCL ? GO:0005886 ... P02948 36738736
    771049 8b64:a (2.589) BS03 SPO ? GO:0005886 ... P02948 36738736
    771050 8b64:a (2.589) BS04 BCL ? GO:0005886 ... P02948 36738736
    771051 8b64:b (2.589) BS01 BCL ? GO:0005886 ... P02948 36738736
    771052 8b64:b (2.589) BS02 BCL ? GO:0005886 ... P02948 36738736
    771053 8b64:b (2.589) BS03 SPO ? GO:0005886 ... P02948 36738736
    771054 8b64:b (2.589) BS04 SPO ? GO:0005886 ... P02948 36738736
    771055 8b64:d (2.589) BS01 BCL ? GO:0005886 ... P02948 36738736
    771056 8b64:d (2.589) BS02 SPO ? GO:0005886 ... P02948 36738736
    771057 8b64:d (2.589) BS03 BCL ? GO:0005886 ... P02948 36738736
    771058 8b64:d (2.589) BS04 SPO ? GO:0005886 ... P02948 36738736
    771059 8b64:e (2.589) BS01 BCL ? GO:0005886 ... P02948 36738736
    771060 8b64:e (2.589) BS02 BCL ? GO:0005886 ... P02948 36738736
    771061 8b64:e (2.589) BS03 SPO ? GO:0005886 ... P02948 36738736
    771062 8b64:e (2.589) BS04 SPO ? GO:0005886 ... P02948 36738736
    771063 8b64:e (2.589) BS05 SPO ? GO:0005886 ... P02948 36738736
    771064 8b64:f (2.589) BS01 SPO ? GO:0005886 ... P02948 36738736
    771065 8b64:f (2.589) BS02 BCL ? GO:0005886 ... P02948 36738736
    771066 8b64:f (2.589) BS03 SPO ? GO:0005886 ... P02948 36738736
    771067 8b64:f (2.589) BS04 BCL ? GO:0005886 ... P02948 36738736
    771068 8b64:f (2.589) BS05 SPO ? GO:0005886 ... P02948 36738736
    771069 8b64:g (2.589) BS01 SPO ? GO:0005886 ... P02948 36738736
    771070 8b64:g (2.589) BS02 BCL ? GO:0005886 ... P02948 36738736
    771071 8b64:g (2.589) BS03 BCL ? GO:0005886 ... P02948 36738736
    771072 8b64:g (2.589) BS04 SPO ? GO:0005886 ... P02948 36738736
    771073 8b64:g (2.589) BS05 SPO ? GO:0005886 ... P02948 36738736
    771074 8b64:i (2.589) BS01 BCL ? GO:0005886 ... P02948 36738736
    771075 8b64:i (2.589) BS02 BCL ? GO:0005886 ... P02948 36738736
    771076 8b64:i (2.589) BS03 SPO ? GO:0005886 ... P02948 36738736
    771077 8b64:i (2.589) BS04 SPO ? GO:0005886 ... P02948 36738736
    771078 8b64:j (2.589) BS01 BCL ? GO:0005886 ... P02948 36738736
    771079 8b64:j (2.589) BS02 SPO ? GO:0005886 ... P02948 36738736
    771080 8b64:j (2.589) BS03 BCL ? GO:0005886 ... P02948 36738736
    771081 8b64:k (2.589) BS01 BCL ? GO:0005886 ... P02948 36738736
    771082 8b64:k (2.589) BS02 SPO ? GO:0005886 ... P02948 36738736
    771083 8b64:k (2.589) BS03 BCL ? GO:0005886 ... P02948 36738736
    771084 8b64:k (2.589) BS04 SPO ? GO:0005886 ... P02948 36738736
    771085 8b64:n (2.589) BS01 SPO ? GO:0005886 ... P02948 36738736
    771086 8b64:n (2.589) BS02 BCL ? GO:0005886 ... P02948 36738736
    771087 8b64:n (2.589) BS03 BCL ? GO:0005886 ... P02948 36738736
    771088 8b64:n (2.589) BS04 SPO ? GO:0005886 ... P02948 36738736
    771089 8b64:n (2.589) BS05 SPO ? GO:0005886 ... P02948 36738736
    771090 8b64:o (2.589) BS01 BCL ? GO:0005886 ... P02948 36738736
    771091 8b64:o (2.589) BS02 BCL ? GO:0005886 ... P02948 36738736
    771092 8b64:o (2.589) BS03 SPO ? GO:0005886 ... P02948 36738736
    771093 8b64:o (2.589) BS04 SPO ? GO:0005886 ... P02948 36738736
    771094 8b64:r (2.589) BS01 BCL ? GO:0005886 ... P02948 36738736
    771095 8b64:r (2.589) BS02 SPO ? GO:0005886 ... P02948 36738736
    771096 8b64:r (2.589) BS03 BCL ? GO:0005886 ... P02948 36738736
    771097 8b64:r (2.589) BS04 SPO ? GO:0005886 ... P02948 36738736
    771098 8b64:s (2.589) BS01 SPO ? GO:0005886 ... P02948 36738736
    771099 8b64:s (2.589) BS02 BCL ? GO:0005886 ... P02948 36738736
    771100 8b64:s (2.589) BS03 BCL ? GO:0005886 ... P02948 36738736
    771101 8b64:s (2.589) BS04 SPO ? GO:0005886 ... P02948 36738736
    771102 8b64:t (2.589) BS01 BCL ? GO:0005886 ... P02948 36738736
    771103 8b64:t (2.589) BS02 SPO ? GO:0005886 ... P02948 36738736
    771104 8b64:t (2.589) BS03 SPO ? GO:0005886 ... P02948 36738736
    771105 8b64:t (2.589) BS04 BCL ? GO:0005886 ... P02948 36738736
    771106 8b64:u (2.589) BS01 SPO ? GO:0005886 ... P02948 36738736
    771107 8b64:u (2.589) BS02 BCL ? GO:0005886 ... P02948 36738736
    771108 8b64:u (2.589) BS03 BCL ? GO:0005886 ... P02948 36738736
    771109 8b66:A (0.95) BS01 NAP 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 N/A
    771110 8b66:A (0.95) BS02 4G7 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 N/A
    771111 8b67:A (2.6) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    771112 8b67:A (2.6) BS02 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    771113 8b67:A (2.6) BS03 CA 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    771114 8b67:A (2.6) BS04 CA 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    771115 8b67:A (2.6) BS05 CA 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    771116 8b67:A (2.6) BS06 CTP 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    771117 8b68:A (1.6) BS01 UPG 2.7.7.9 GO:0000166 ... A0A2W4LV58 N/A
    771118 8b69:B (3.07) BS01 MG 3.6.5.2 GO:0003924 ... P01116 37833074
    771119 8b69:B (3.07) BS02 GNP 3.6.5.2 GO:0003924 ... P01116 37833074
    771120 8b69:D (3.07) BS01 MG 3.6.5.2 GO:0003924 ... P01116 37833074
    771121 8b69:D (3.07) BS02 GNP 3.6.5.2 GO:0003924 ... P01116 37833074
    771122 8b6c:A (2.79) BS01 rna ? GO:0002181 ... G1TT27 36867692
    771123 8b6c:A (2.79) BS02 MG ? GO:0002181 ... G1TT27 36867692
    771124 8b6c:B (2.79) BS01 rna ? GO:0003723 ... G1TL06 36867692
    771125 8b6c:C (2.79) BS01 rna ? GO:0003735 ... G1SVW5 36867692
    771126 8b6c:C (2.79) BS02 rna ? GO:0003735 ... G1SVW5 36867692
    771127 8b6c:D (2.79) BS01 rna ? GO:0000027 ... P19949 36867692
    771128 8b6c:D (2.79) BS02 rna ? GO:0000027 ... P19949 36867692
    771129 8b6c:E (2.79) BS01 rna ? GO:0000027 ... G1SKF7 36867692
    771130 8b6c:F (2.79) BS01 rna ? GO:0000463 ... G1SV32 36867692
    771131 8b6c:F (2.79) BS02 rna ? GO:0000463 ... G1SV32 36867692
    771132 8b6c:G (2.79) BS01 rna ? GO:0003723 ... G1STW0 36867692
    771133 8b6c:G (2.79) BS02 rna ? GO:0003723 ... G1STW0 36867692
    771134 8b6c:H (2.79) BS01 rna ? GO:0002181 ... G1SWI6 36867692
    771135 8b6c:I (2.79) BS01 rna ? GO:0003735 ... B7NZQ2 36867692
    771136 8b6c:I (2.79) BS02 rna ? GO:0003735 ... B7NZQ2 36867692
    771137 8b6c:J (2.79) BS01 rna ? GO:0003735 ... G1TUB8 36867692
    771138 8b6c:J (2.79) BS02 rna ? GO:0003735 ... G1TUB8 36867692
    771139 8b6c:K (2.79) BS01 rna ? GO:0005262 ... A0A5F9CHB7 36867692
    771140 8b6c:K (2.79) BS02 OWI ? GO:0005262 ... A0A5F9CHB7 36867692
    771141 8b6c:L (2.79) BS01 rna ? GO:0003723 ... G1TKB3 36867692
    771142 8b6c:L (2.79) BS02 rna ? GO:0003723 ... G1TKB3 36867692
    771143 8b6c:M (2.79) BS01 rna ? GO:0003723 ... G1SZ12 36867692
    771144 8b6c:N (2.79) BS01 rna ? GO:0002181 ... G1T0C1 36867692
    771145 8b6c:N (2.79) BS02 rna ? GO:0002181 ... G1T0C1 36867692
    771146 8b6c:O (2.79) BS01 rna ? GO:0003729 ... G1TVS8 36867692
    771147 8b6c:P (2.79) BS01 rna ? GO:0003735 ... G1SCJ6 36867692
    771148 8b6c:P (2.79) BS02 rna ? GO:0003735 ... G1SCJ6 36867692
    771149 8b6c:Q (2.79) BS01 rna ? GO:0003723 ... G1TFE0 36867692
    771150 8b6c:R (2.79) BS01 rna ? GO:0003723 ... G1TYL6 36867692
    771151 8b6c:S (2.79) BS01 rna ? GO:0003735 ... G1TTY7 36867692
    771152 8b6c:S (2.79) BS02 rna ? GO:0003735 ... G1TTY7 36867692
    771153 8b6c:T (2.79) BS01 rna ? GO:0003735 ... G1SHQ2 36867692
    771154 8b6c:T (2.79) BS02 rna ? GO:0003735 ... G1SHQ2 36867692
    771155 8b6c:U (2.79) BS01 rna ? GO:0003735 ... G1TSG1 36867692
    771156 8b6c:V (2.79) BS01 rna ? GO:0003735 ... G1T6D1 36867692
    771157 8b6c:W (2.79) BS01 rna ? GO:0000027 ... G1SE28 36867692
    771158 8b6c:X (2.79) BS01 rna ? GO:0003735 ... G1SE76 36867692
    771159 8b6c:X (2.79) BS02 rna ? GO:0003735 ... G1SE76 36867692
    771160 8b6c:Y (2.79) BS01 rna ? GO:0003723 ... G1SQH0 36867692
    771161 8b6c:Y (2.79) BS02 rna ? GO:0003723 ... G1SQH0 36867692
    771162 8b6c:Z (2.79) BS01 rna ? GO:0003735 ... G1TXF6 36867692
    771163 8b6c:a (2.79) BS01 rna ? GO:0003735 ... G1SNY0 36867692
    771164 8b6c:b (2.79) BS01 rna ? GO:0002181 ... G1SGR6 36867692
    771165 8b6c:c (2.79) BS01 rna ? GO:0003723 ... G1TDL2 36867692
    771166 8b6c:d (2.79) BS01 rna ? GO:0003735 ... G1SHG0 36867692
    771167 8b6c:e (2.79) BS01 rna ? GO:0003735 ... G1TUN8 36867692
    771168 8b6c:f (2.79) BS01 rna ? GO:0000049 ... G1SF08 36867692
    771169 8b6c:g (2.79) BS01 rna ? GO:0003735 ... G1TXG5 36867692
    771170 8b6c:g (2.79) BS02 ZN ? GO:0003735 ... G1TXG5 36867692
    771171 8b6c:h (2.79) BS01 rna ? GO:0000463 ... G1SIT5 36867692
    771172 8b6c:h (2.79) BS02 rna ? GO:0000463 ... G1SIT5 36867692
    771173 8b6c:i (2.79) BS01 rna ? GO:0003735 ... G1TTQ5 36867692
    771174 8b6c:j (2.79) BS01 rna ? GO:0003735 ... U3KPD5 36867692
    771175 8b6c:j (2.79) BS02 rna ? GO:0003735 ... U3KPD5 36867692
    771176 8b6c:j (2.79) BS03 ZN ? GO:0003735 ... U3KPD5 36867692
    771177 8b6c:k (2.79) BS01 rna ? GO:0003735 ... G1U001 36867692
    771178 8b6c:l (2.79) BS01 rna ? GO:0003735 ... G1TTN1 36867692
    771179 8b6c:l (2.79) BS02 rna ? GO:0003735 ... G1TTN1 36867692
    771180 8b6c:m (2.79) BS01 rna ? GO:0003735 ... P0DXC2 36867692
    771181 8b6c:m (2.79) BS02 ZN ? GO:0003735 ... P0DXC2 36867692
    771182 8b6c:o (2.79) BS01 rna ? GO:0003735 ... G1T040 36867692
    771183 8b6c:o (2.79) BS02 ZN ? GO:0003735 ... G1T040 36867692
    771184 8b6c:p (2.79) BS01 rna ? GO:0003735 ... G1SY53 36867692
    771185 8b6c:p (2.79) BS02 ZN ? GO:0003735 ... G1SY53 36867692
    771186 8b6c:r (2.79) BS01 rna ? GO:0003735 ... G1U7L1 36867692
    771187 8b6d:A (2.1) BS01 UDP 2.7.7.9 GO:0000166 ... A0A2W4LV58 N/A
    771188 8b6d:B (2.1) BS01 UDP 2.7.7.9 GO:0000166 ... A0A2W4LV58 N/A
    771189 8b6f:A0 (2.8) BS01 UDP 2.4.1.182 GO:0005543 ... Q22E24 36949187
    771190 8b6f:A1 (2.8) BS01 NDP ? GO:0005739 ... I7MLH2 36949187
    771191 8b6f:A5 (2.8) BS01 ADP ? N/A I7MIJ7 36949187
    771192 8b6f:A8 (2.8) BS01 ADP N/A N/A N/A 36949187
    771193 8b6f:AB (2.8) BS01 FES ? GO:0008137 ... Q23KA9 36949187
    771194 8b6f:AB (2.8) BS02 SF4 ? GO:0008137 ... Q23KA9 36949187
    771195 8b6f:AB (2.8) BS03 SF4 ? GO:0008137 ... Q23KA9 36949187
    771196 8b6f:AD (2.8) BS01 SF4 7.1.1.2 GO:0005739 ... Q23KE4 36949187
    771197 8b6f:AD (2.8) BS02 FMN 7.1.1.2 GO:0005739 ... Q23KE4 36949187
    771198 8b6f:AE (2.8) BS01 ADP 1.6.5.3 GO:0005739 ... Q951B1 36949187
    771199 8b6f:AI (2.8) BS01 FES ? GO:0003954 ... I7MEP0 36949187
    771200 8b6f:AL (2.8) BS01 SF4 ? GO:0003954 ... I7MDW5 36949187

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).