SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    771401 8b7b:C (2.25) BS02 CA 3.6.5.- GO:0000226 ... P81947 36468686
    771402 8b7b:D (2.25) BS01 GDP ? GO:0000226 ... Q6B856 36468686
    771403 8b7b:D (2.25) BS02 PX0 ? GO:0000226 ... Q6B856 36468686
    771404 8b7b:F (2.25) BS01 ACP 6.3.2.25 GO:0000226 ... A0A8V0Z8P0 36468686
    771405 8b7c:A (1.9) BS01 GTP 3.6.5.- GO:0000226 ... P81947 36468686
    771406 8b7c:A (1.9) BS02 CA 3.6.5.- GO:0000226 ... P81947 36468686
    771407 8b7c:B (1.9) BS01 GDP ? GO:0000226 ... Q6B856 36468686
    771408 8b7c:C (1.9) BS01 GTP 3.6.5.- GO:0000226 ... P81947 36468686
    771409 8b7c:C (1.9) BS02 CA 3.6.5.- GO:0000226 ... P81947 36468686
    771410 8b7c:D (1.9) BS01 GDP ? GO:0000226 ... Q6B856 36468686
    771411 8b7c:D (1.9) BS02 PWC ? GO:0000226 ... Q6B856 36468686
    771412 8b7c:F (1.9) BS01 ACP 6.3.2.25 GO:0000226 ... A0A8V0Z8P0 36468686
    771413 8b7e:A (2.6) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    771414 8b7e:A (2.6) BS02 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    771415 8b7e:A (2.6) BS03 UTP 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    771416 8b7e:A (2.6) BS04 CA 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    771417 8b7e:B (2.6) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    771418 8b7e:B (2.6) BS02 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    771419 8b7e:B (2.6) BS03 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    771420 8b7e:B (2.6) BS04 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    771421 8b7e:B (2.6) BS05 UTP 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    771422 8b7e:B (2.6) BS06 CA 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    771423 8b7l:AAA (1.24) BS01 AU ? GO:0005506 ... P02791 36430642
    771424 8b7o:AAA (1.17) BS01 MG 1.16.3.1 GO:0004322 ... P02794 36430642
    771425 8b7o:AAA (1.17) BS02 FE 1.16.3.1 GO:0004322 ... P02794 36430642
    771426 8b7o:AAA (1.17) BS03 AU 1.16.3.1 GO:0004322 ... P02794 36430642
    771427 8b7p:AAA (2.11) BS01 CU 3.2.1.4 GO:0003674 ... Q5AZ52 N/A
    771428 8b7p:BBB (2.11) BS01 CU 3.2.1.4 GO:0003674 ... Q5AZ52 N/A
    771429 8b7p:CCC (2.11) BS01 CU 3.2.1.4 GO:0003674 ... Q5AZ52 N/A
    771430 8b7p:DDD (2.11) BS01 CU 3.2.1.4 GO:0003674 ... Q5AZ52 N/A
    771431 8b7r:A (2.15) BS01 Q0X 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771432 8b7r:B (2.15) BS01 Q0X 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771433 8b7r:C (2.15) BS01 Q0X 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771434 8b7r:D (2.15) BS01 Q0X 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771435 8b7r:E (2.15) BS01 Q0X 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771436 8b7r:F (2.15) BS01 Q0X 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771437 8b7s:A (2.1) BS01 FAD N/A GO:0016614 ... N/A 36353978
    771438 8b7u:A (2.8) BS01 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771439 8b7u:A (2.8) BS02 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771440 8b7u:B (2.8) BS01 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771441 8b7u:B (2.8) BS02 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771442 8b7u:B (2.8) BS03 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771443 8b7u:C (2.8) BS01 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771444 8b7u:C (2.8) BS02 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771445 8b7u:D (2.8) BS01 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771446 8b7u:D (2.8) BS02 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771447 8b7u:E (2.8) BS01 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771448 8b7u:E (2.8) BS02 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771449 8b7u:F (2.8) BS01 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771450 8b7u:F (2.8) BS02 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771451 8b7u:G (2.8) BS01 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771452 8b7u:G (2.8) BS02 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771453 8b7u:H (2.8) BS01 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771454 8b7u:H (2.8) BS02 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771455 8b7u:I (2.8) BS01 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771456 8b7u:I (2.8) BS02 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771457 8b7u:J (2.8) BS01 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771458 8b7u:K (2.8) BS01 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771459 8b7u:K (2.8) BS02 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771460 8b7u:L (2.8) BS01 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771461 8b7u:L (2.8) BS02 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771462 8b7u:M (2.8) BS01 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771463 8b7u:M (2.8) BS02 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771464 8b7u:N (2.8) BS01 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771465 8b7u:N (2.8) BS02 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771466 8b7u:O (2.8) BS01 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771467 8b7u:O (2.8) BS02 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771468 8b7u:P (2.8) BS01 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771469 8b7u:P (2.8) BS02 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771470 8b7u:Q (2.8) BS01 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771471 8b7u:Q (2.8) BS02 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771472 8b7u:R (2.8) BS01 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771473 8b7u:R (2.8) BS02 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771474 8b7x:A (1.42) BS01 JEF N/A GO:0006826 ... N/A 37428843
    771475 8b7y:5 (3.0) BS01 rna ? GO:0000028 ... P68679 36603206
    771476 8b7y:5 (3.0) BS02 MG ? GO:0000028 ... P68679 36603206
    771477 8b7y:D (3.0) BS01 rna ? GO:0000028 ... P0A7V0 36603206
    771478 8b7y:E (3.0) BS01 rna ? GO:0000028 ... P0A7V3 36603206
    771479 8b7y:F (3.0) BS01 rna ? GO:0000028 ... P0A7V8 36603206
    771480 8b7y:G (3.0) BS01 rna ? GO:0000028 ... P0A7W1 36603206
    771481 8b7y:H (3.0) BS01 rna ? GO:0002181 ... P02358 36603206
    771482 8b7y:K (3.0) BS01 rna ? GO:0000027 ... P60422 36603206
    771483 8b7y:K (3.0) BS02 rna ? GO:0000027 ... P60422 36603206
    771484 8b7y:L (3.0) BS01 rna ? GO:0000027 ... P60438 36603206
    771485 8b7y:M (3.0) BS01 rna ? GO:0001070 ... P60723 36603206
    771486 8b7y:N (3.0) BS01 rna ? GO:0000028 ... P02359 36603206
    771487 8b7y:O (3.0) BS01 rna ? GO:0000027 ... P0AG55 36603206
    771488 8b7y:P (3.0) BS01 rna ? GO:0000028 ... P0A7W7 36603206
    771489 8b7y:Q (3.0) BS01 rna ? GO:0000049 ... P0A7X3 36603206
    771490 8b7y:Q (3.0) BS02 rna ? GO:0000049 ... P0A7X3 36603206
    771491 8b7y:R (3.0) BS01 rna ? GO:0002181 ... P0AA10 36603206
    771492 8b7y:S (3.0) BS01 rna ? GO:0002181 ... P0ADY3 36603206
    771493 8b7y:S (3.0) BS02 rna ? GO:0002181 ... P0ADY3 36603206
    771494 8b7y:T (3.0) BS01 rna ? GO:0002181 ... P02413 36603206
    771495 8b7y:U (3.0) BS01 rna ? GO:0000027 ... P0ADY7 36603206
    771496 8b7y:U (3.0) BS02 rna ? GO:0000027 ... P0ADY7 36603206
    771497 8b7y:V (3.0) BS01 rna ? GO:0000027 ... P0AG44 36603206
    771498 8b7y:W (3.0) BS01 rna ? GO:0002181 ... P0C018 36603206
    771499 8b7y:W (3.0) BS02 rna ? GO:0002181 ... P0C018 36603206
    771500 8b7y:X (3.0) BS01 rna ? GO:0000027 ... P0A7K6 36603206
    771501 8b7y:X (3.0) BS02 rna ? GO:0000027 ... P0A7K6 36603206
    771502 8b7y:Y (3.0) BS01 rna ? GO:0000027 ... P0A7L3 36603206
    771503 8b7y:Z (3.0) BS01 rna ? GO:0002181 ... P0AG48 36603206
    771504 8b7y:a (3.0) BS01 rna ? GO:0002181 ... P61175 36603206
    771505 8b7y:a (3.0) BS02 peptide ? GO:0002181 ... P61175 36603206
    771506 8b7y:b (3.0) BS01 rna ? GO:0000027 ... P0ADZ0 36603206
    771507 8b7y:c (3.0) BS01 rna ? GO:0000027 ... P60624 36603206
    771508 8b7y:d (3.0) BS01 rna ? GO:0000027 ... P68919 36603206
    771509 8b7y:d (3.0) BS02 rna ? GO:0000027 ... P68919 36603206
    771510 8b7y:e (3.0) BS01 rna ? GO:0000027 ... P0A7L8 36603206
    771511 8b7y:e (3.0) BS02 rna ? GO:0000027 ... P0A7L8 36603206
    771512 8b7y:f (3.0) BS01 rna ? GO:0000027 ... P0A7M2 36603206
    771513 8b7y:g (3.0) BS01 rna ? GO:0000027 ... P0A7M6 36603206
    771514 8b7y:h (3.0) BS01 rna ? GO:0000027 ... P0AG51 36603206
    771515 8b7y:i (3.0) BS01 rna ? GO:0000027 ... P0A7N4 36603206
    771516 8b7y:j (3.0) BS01 rna ? GO:0000027 ... P0A7N9 36603206
    771517 8b7y:k (3.0) BS01 rna ? GO:0002181 ... P0A7P5 36603206
    771518 8b7y:l (3.0) BS01 rna ? GO:0002181 ... P0A7Q1 36603206
    771519 8b7y:m (3.0) BS01 rna ? GO:0002181 ... P0A7Q6 36603206
    771520 8b7y:m (3.0) BS02 ZN ? GO:0002181 ... P0A7Q6 36603206
    771521 8b7y:o (3.0) BS01 rna ? GO:0000049 ... P0A7R5 36603206
    771522 8b7y:p (3.0) BS01 rna ? GO:0002181 ... P0A7R9 36603206
    771523 8b7y:q (3.0) BS01 rna ? GO:0000049 ... P0A7S3 36603206
    771524 8b7y:r (3.0) BS01 rna ? GO:0000049 ... P0A7S9 36603206
    771525 8b7y:s (3.0) BS01 rna ? GO:0000028 ... P0AG59 36603206
    771526 8b7y:t (3.0) BS01 rna ? GO:0000028 ... P0ADZ4 36603206
    771527 8b7y:t (3.0) BS02 rna ? GO:0000028 ... P0ADZ4 36603206
    771528 8b7y:u (3.0) BS01 rna ? GO:0000028 ... P0A7T3 36603206
    771529 8b7y:v (3.0) BS01 rna ? GO:0000028 ... P0AG63 36603206
    771530 8b7y:w (3.0) BS01 rna ? GO:0002181 ... P0A7T7 36603206
    771531 8b7y:x (3.0) BS01 rna ? GO:0000028 ... P0A7U3 36603206
    771532 8b7y:y (3.0) BS01 rna ? GO:0000028 ... P0A7U7 36603206
    771533 8b7z:A (3.0) BS01 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771534 8b7z:A (3.0) BS02 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771535 8b7z:B (3.0) BS01 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771536 8b7z:B (3.0) BS02 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771537 8b7z:B (3.0) BS03 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771538 8b7z:C (3.0) BS01 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771539 8b7z:C (3.0) BS02 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771540 8b7z:D (3.0) BS01 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771541 8b7z:D (3.0) BS02 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771542 8b7z:E (3.0) BS01 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771543 8b7z:E (3.0) BS02 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771544 8b7z:F (3.0) BS01 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771545 8b7z:F (3.0) BS02 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771546 8b7z:G (3.0) BS01 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771547 8b7z:G (3.0) BS02 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771548 8b7z:H (3.0) BS01 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771549 8b7z:H (3.0) BS02 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771550 8b7z:I (3.0) BS01 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771551 8b7z:I (3.0) BS02 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771552 8b7z:I (3.0) BS03 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771553 8b7z:J (3.0) BS01 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771554 8b7z:K (3.0) BS01 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771555 8b7z:K (3.0) BS02 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771556 8b7z:L (3.0) BS01 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771557 8b7z:L (3.0) BS02 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771558 8b7z:M (3.0) BS01 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771559 8b7z:M (3.0) BS02 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771560 8b7z:M (3.0) BS03 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771561 8b7z:M (3.0) BS04 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771562 8b7z:M (3.0) BS05 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771563 8b7z:N (3.0) BS01 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771564 8b7z:N (3.0) BS02 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771565 8b7z:N (3.0) BS03 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771566 8b7z:N (3.0) BS04 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771567 8b7z:N (3.0) BS05 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771568 8b7z:O (3.0) BS01 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771569 8b7z:O (3.0) BS02 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771570 8b7z:O (3.0) BS03 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771571 8b7z:O (3.0) BS04 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771572 8b7z:O (3.0) BS05 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771573 8b7z:P (3.0) BS01 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771574 8b7z:P (3.0) BS02 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771575 8b7z:P (3.0) BS03 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771576 8b7z:P (3.0) BS04 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771577 8b7z:P (3.0) BS05 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771578 8b7z:Q (3.0) BS01 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771579 8b7z:Q (3.0) BS02 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771580 8b7z:R (3.0) BS01 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771581 8b7z:R (3.0) BS02 DQH 5.5.1.6 GO:0016853 ... V9P0A9 36432010
    771582 8b80:A (1.78) BS01 BGP 3.2.1.85 GO:0004553 ... W8QF82 N/A
    771583 8b81:A (1.585) BS01 BGC 3.2.1.85 GO:0004553 ... W8QF82 N/A
    771584 8b81:A (1.585) BS02 BG6 3.2.1.85 GO:0004553 ... W8QF82 N/A
    771585 8b81:B (1.585) BS01 BGC 3.2.1.85 GO:0004553 ... W8QF82 N/A
    771586 8b81:B (1.585) BS02 BG6 3.2.1.85 GO:0004553 ... W8QF82 N/A
    771587 8b82:A (2.8) BS01 peptide ? N/A Q14160 N/A
    771588 8b82:A (2.8) BS02 peptide ? N/A Q14160 N/A
    771589 8b82:B (2.8) BS01 peptide ? N/A Q14160 N/A
    771590 8b87:A (2.0) BS01 peptide ? N/A Q14160 N/A
    771591 8b87:A (2.0) BS02 peptide ? N/A Q14160 N/A
    771592 8b87:A (2.0) BS03 SDY ? N/A Q14160 N/A
    771593 8b87:B (2.0) BS01 peptide ? N/A Q14160 N/A
    771594 8b87:B (2.0) BS02 peptide ? N/A Q14160 N/A
    771595 8b87:B (2.0) BS03 SDY ? N/A Q14160 N/A
    771596 8b8f:A (1.0) BS01 GAL ? N/A B0D650 36754262
    771597 8b8f:A (1.0) BS02 GAL ? N/A B0D650 36754262
    771598 8b8f:A (1.0) BS03 GAL ? N/A B0D650 36754262
    771599 8b8f:A (1.0) BS04 GAL ? N/A B0D650 36754262
    771600 8b8f:A (1.0) BS05 GAL ? N/A B0D650 36754262

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).