SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    771801 8am5:m (3.1) BS01 CLA ? GO:0015979 ... P72986 37542031
    771802 8am5:m (3.1) BS02 ECH ? GO:0015979 ... P72986 37542031
    771803 8am6:AAA (1.33) BS01 FAD ? N/A F4G7N3 38550701
    771804 8am6:AAA (1.33) BS02 A2Q ? N/A F4G7N3 38550701
    771805 8am6:AAA (1.33) BS03 A2Q ? N/A F4G7N3 38550701
    771806 8am6:AAA (1.33) BS04 A2Q ? N/A F4G7N3 38550701
    771807 8am6:AAA (1.33) BS05 A2Q ? N/A F4G7N3 38550701
    771808 8am6:BaB (1.33) BS01 FAD ? N/A F4G7N3 38550701
    771809 8am6:BaB (1.33) BS02 A2Q ? N/A F4G7N3 38550701
    771810 8am6:BaB (1.33) BS03 A2Q ? N/A F4G7N3 38550701
    771811 8am6:BaB (1.33) BS04 A2Q ? N/A F4G7N3 38550701
    771812 8am6:BaB (1.33) BS05 A2Q ? N/A F4G7N3 38550701
    771813 8am7:A (1.5) BS01 peptide ? GO:0001836 ... P31947 37676236
    771814 8am7:A (1.5) BS02 MRF ? GO:0001836 ... P31947 37676236
    771815 8am8:AAA (1.85) BS01 FAD ? N/A F4G7N3 38550701
    771816 8am8:AAA (1.85) BS02 A2Q ? N/A F4G7N3 38550701
    771817 8am8:BBB (1.85) BS01 FAD ? N/A F4G7N3 38550701
    771818 8am8:BBB (1.85) BS02 A2Q ? N/A F4G7N3 38550701
    771819 8am9:0 (2.8) BS01 rna ? GO:0000027 ... P0A7N9 36997646
    771820 8am9:1 (2.8) BS01 rna ? GO:0002181 ... P0A7P5 36997646
    771821 8am9:2 (2.8) BS01 rna ? GO:0002181 ... P0A7Q1 36997646
    771822 8am9:3 (2.8) BS01 rna ? GO:0002181 ... P0A7Q6 36997646
    771823 8am9:3 (2.8) BS02 ZN ? GO:0002181 ... P0A7Q6 36997646
    771824 8am9:4 (2.8) BS01 rna ? GO:0002181 ... P0A7M9 36997646
    771825 8am9:4 (2.8) BS02 rna ? GO:0002181 ... P0A7M9 36997646
    771826 8am9:4 (2.8) BS03 ZN ? GO:0002181 ... P0A7M9 36997646
    771827 8am9:C (2.8) BS01 rna ? GO:0000028 ... P0A7V0 36997646
    771828 8am9:D (2.8) BS01 rna ? GO:0000028 ... P0A7V3 36997646
    771829 8am9:E (2.8) BS01 rna ? GO:0000028 ... P0A7V8 36997646
    771830 8am9:F (2.8) BS01 rna ? GO:0000028 ... P0A7W1 36997646
    771831 8am9:G (2.8) BS01 rna ? GO:0002181 ... P02358 36997646
    771832 8am9:H (2.8) BS01 rna ? GO:0000028 ... P02359 36997646
    771833 8am9:I (2.8) BS01 rna ? GO:0000028 ... P0A7W7 36997646
    771834 8am9:J (2.8) BS01 rna ? GO:0002181 ... P0A7X3 36997646
    771835 8am9:J (2.8) BS02 rna ? GO:0002181 ... P0A7X3 36997646
    771836 8am9:K (2.8) BS01 rna ? GO:0000049 ... P0A7R5 36997646
    771837 8am9:L (2.8) BS01 rna ? GO:0002181 ... P0A7R9 36997646
    771838 8am9:M (2.8) BS01 rna ? GO:0000049 ... P0A7S3 36997646
    771839 8am9:M (2.8) BS02 rna ? GO:0000049 ... P0A7S3 36997646
    771840 8am9:N (2.8) BS01 rna ? GO:0000049 ... P0A7S9 36997646
    771841 8am9:N (2.8) BS02 rna ? GO:0000049 ... P0A7S9 36997646
    771842 8am9:O (2.8) BS01 rna ? GO:0000028 ... P0AG59 36997646
    771843 8am9:P (2.8) BS01 rna ? GO:0000028 ... P0ADZ4 36997646
    771844 8am9:P (2.8) BS02 rna ? GO:0000028 ... P0ADZ4 36997646
    771845 8am9:Q (2.8) BS01 rna ? GO:0000028 ... P0A7T3 36997646
    771846 8am9:R (2.8) BS01 rna ? GO:0000028 ... P0AG63 36997646
    771847 8am9:S (2.8) BS01 rna ? GO:0002181 ... P0A7T7 36997646
    771848 8am9:T (2.8) BS01 rna ? GO:0002181 ... P0A7U3 36997646
    771849 8am9:U (2.8) BS01 rna ? GO:0000028 ... P0A7U7 36997646
    771850 8am9:V (2.8) BS01 rna ? GO:0000028 ... P68679 36997646
    771851 8am9:c (2.8) BS01 rna ? GO:0000027 ... P60422 36997646
    771852 8am9:c (2.8) BS02 rna ? GO:0000027 ... P60422 36997646
    771853 8am9:d (2.8) BS01 rna ? GO:0000027 ... P60438 36997646
    771854 8am9:e (2.8) BS01 rna ? GO:0001070 ... P60723 36997646
    771855 8am9:e (2.8) BS02 peptide ? GO:0001070 ... P60723 36997646
    771856 8am9:f (2.8) BS01 rna ? GO:0000027 ... P62399 36997646
    771857 8am9:f (2.8) BS02 rna ? GO:0000027 ... P62399 36997646
    771858 8am9:f (2.8) BS03 rna ? GO:0000027 ... P62399 36997646
    771859 8am9:g (2.8) BS01 rna ? GO:0000027 ... P0AG55 36997646
    771860 8am9:h (2.8) BS01 rna ? GO:0002181 ... P0A7R1 36997646
    771861 8am9:i (2.8) BS01 rna ? GO:0002181 ... P0AA10 36997646
    771862 8am9:j (2.8) BS01 rna ? GO:0002181 ... P0ADY3 36997646
    771863 8am9:j (2.8) BS02 rna ? GO:0002181 ... P0ADY3 36997646
    771864 8am9:k (2.8) BS01 rna ? GO:0002181 ... P02413 36997646
    771865 8am9:l (2.8) BS01 rna ? GO:0000027 ... P0ADY7 36997646
    771866 8am9:l (2.8) BS02 rna ? GO:0000027 ... P0ADY7 36997646
    771867 8am9:l (2.8) BS03 rna ? GO:0000027 ... P0ADY7 36997646
    771868 8am9:m (2.8) BS01 rna ? GO:0000027 ... P0AG44 36997646
    771869 8am9:n (2.8) BS01 rna ? GO:0002181 ... P0C018 36997646
    771870 8am9:n (2.8) BS02 rna ? GO:0002181 ... P0C018 36997646
    771871 8am9:o (2.8) BS01 rna ? GO:0000027 ... P0A7K6 36997646
    771872 8am9:o (2.8) BS02 rna ? GO:0000027 ... P0A7K6 36997646
    771873 8am9:p (2.8) BS01 rna ? GO:0000027 ... P0A7L3 36997646
    771874 8am9:q (2.8) BS01 rna ? GO:0002181 ... P0AG48 36997646
    771875 8am9:r (2.8) BS01 rna ? GO:0002181 ... P61175 36997646
    771876 8am9:r (2.8) BS02 peptide ? GO:0002181 ... P61175 36997646
    771877 8am9:s (2.8) BS01 rna ? GO:0000027 ... P0ADZ0 36997646
    771878 8am9:t (2.8) BS01 rna ? GO:0000027 ... P60624 36997646
    771879 8am9:u (2.8) BS01 rna ? GO:0000027 ... P68919 36997646
    771880 8am9:v (2.8) BS01 rna ? GO:0000027 ... P0A7L8 36997646
    771881 8am9:v (2.8) BS02 rna ? GO:0000027 ... P0A7L8 36997646
    771882 8am9:w (2.8) BS01 rna ? GO:0000027 ... P0A7M2 36997646
    771883 8am9:x (2.8) BS01 rna ? GO:0000027 ... P0A7M6 36997646
    771884 8am9:y (2.8) BS01 rna ? GO:0000027 ... P0AG51 36997646
    771885 8am9:y (2.8) BS02 rna ? GO:0000027 ... P0AG51 36997646
    771886 8am9:z (2.8) BS01 rna ? GO:0000027 ... P0A7N4 36997646
    771887 8amd:A (3.9) BS01 dna ? GO:0000150 ... P0A452 36806960
    771888 8amd:A (3.9) BS02 AGS ? GO:0000150 ... P0A452 36806960
    771889 8amd:A (3.9) BS03 AGS ? GO:0000150 ... P0A452 36806960
    771890 8amd:B (3.9) BS01 dna ? GO:0000150 ... P0A452 36806960
    771891 8amd:B (3.9) BS02 AGS ? GO:0000150 ... P0A452 36806960
    771892 8amd:B (3.9) BS03 AGS ? GO:0000150 ... P0A452 36806960
    771893 8amd:F (3.9) BS01 dna ? GO:0000150 ... P0A452 36806960
    771894 8amd:F (3.9) BS02 AGS ? GO:0000150 ... P0A452 36806960
    771895 8amd:F (3.9) BS03 AGS ? GO:0000150 ... P0A452 36806960
    771896 8amd:G (3.9) BS01 AGS ? GO:0000150 ... P0A452 36806960
    771897 8amf:A (3.8) BS01 dna ? GO:0000150 ... P0A452 36806960
    771898 8amf:A (3.8) BS02 dna ? GO:0000150 ... P0A452 36806960
    771899 8amf:A (3.8) BS03 AGS ? GO:0000150 ... P0A452 36806960
    771900 8amf:A (3.8) BS04 AGS ? GO:0000150 ... P0A452 36806960
    771901 8amf:B (3.8) BS01 dna ? GO:0000150 ... P0A452 36806960
    771902 8amf:B (3.8) BS02 dna ? GO:0000150 ... P0A452 36806960
    771903 8amf:B (3.8) BS03 AGS ? GO:0000150 ... P0A452 36806960
    771904 8amf:B (3.8) BS04 AGS ? GO:0000150 ... P0A452 36806960
    771905 8amf:F (3.8) BS01 dna ? GO:0000150 ... P0A452 36806960
    771906 8amf:F (3.8) BS02 dna ? GO:0000150 ... P0A452 36806960
    771907 8amf:F (3.8) BS03 AGS ? GO:0000150 ... P0A452 36806960
    771908 8amf:F (3.8) BS04 AGS ? GO:0000150 ... P0A452 36806960
    771909 8amf:G (3.8) BS01 dna ? GO:0000150 ... P0A452 36806960
    771910 8amf:G (3.8) BS02 AGS ? GO:0000150 ... P0A452 36806960
    771911 8amo:A (1.4) BS01 HEM 1.14.-.- GO:0004497 ... P9WPL3 36699703
    771912 8amp:A (2.0) BS01 F3S ? N/A P71820 36699703
    771913 8amq:A (1.6) BS01 F3S 1.14.-.- GO:0004497 ... O53937
    P9WPL3
    36699703
    771914 8amq:A (1.6) BS02 HEM 1.14.-.- GO:0004497 ... O53937
    P9WPL3
    36699703
    771915 8ams:C (2.4) BS01 ZN 2.3.2.27 GO:0008270 ... Q9C040 N/A
    771916 8ams:C (2.4) BS02 ZN 2.3.2.27 GO:0008270 ... Q9C040 N/A
    771917 8ams:D (2.4) BS01 ZN 2.3.2.27 GO:0008270 ... Q9C040 N/A
    771918 8ams:D (2.4) BS02 ZN 2.3.2.27 GO:0008270 ... Q9C040 N/A
    771919 8amt:AAA (1.5) BS01 MN ? GO:0003677 ... P13921 36688326
    771920 8amu:A (3.0) BS01 dna ? GO:0003677 ... P13921 36688326
    771921 8amu:A (3.0) BS02 dna ? GO:0003677 ... P13921 36688326
    771922 8amu:A (3.0) BS03 MN ? GO:0003677 ... P13921 36688326
    771923 8amu:B (3.0) BS01 dna ? GO:0003677 ... P13921 36688326
    771924 8amu:B (3.0) BS02 dna ? GO:0003677 ... P13921 36688326
    771925 8amu:B (3.0) BS03 MN ? GO:0003677 ... P13921 36688326
    771926 8amu:E (3.0) BS01 dna ? GO:0003677 ... P13921 36688326
    771927 8amu:E (3.0) BS02 dna ? GO:0003677 ... P13921 36688326
    771928 8amu:E (3.0) BS03 MN ? GO:0003677 ... P13921 36688326
    771929 8amu:F (3.0) BS01 dna ? GO:0003677 ... P13921 36688326
    771930 8amu:F (3.0) BS02 dna ? GO:0003677 ... P13921 36688326
    771931 8amy:A (1.67) BS01 ZN ? GO:0005576 ... P0DRC4 37642664
    771932 8amz:H (3.3) BS01 ATP ? GO:0005524 ... Q41365 N/A
    771933 8amz:I (3.3) BS01 ADP N/A GO:0005524 ... N/A N/A
    771934 8an2:AAA (3.2) BS01 MAN ? N/A Q4J6E5 38251732
    771935 8an2:AAA (3.2) BS02 MAN ? N/A Q4J6E5 38251732
    771936 8an3:AAA (3.9) BS01 YZT ? N/A Q4J6E5 38251732
    771937 8an6:A (1.9) BS01 BTN N/A GO:0009374 ... N/A 36853192
    771938 8an6:B (1.9) BS01 BTN N/A GO:0009374 ... N/A 36853192
    771939 8an6:C (1.9) BS01 BTN N/A GO:0009374 ... N/A 36853192
    771940 8an6:D (1.9) BS01 BTN N/A GO:0009374 ... N/A 36853192
    771941 8an8:A (2.394) BS01 MDI 2.7.10.1 GO:0004672 ... P08581 35987508
    771942 8an8:B (2.394) BS01 MDI 2.7.10.1 GO:0004672 ... P08581 35987508
    771943 8an9:A (1.273) BS01 peptide ? GO:0030246 ... Q9HYN5 37227046
    771944 8an9:A (1.273) BS02 CA ? GO:0030246 ... Q9HYN5 37227046
    771945 8an9:A (1.273) BS03 CA ? GO:0030246 ... Q9HYN5 37227046
    771946 8an9:A (1.273) BS04 ZDC ? GO:0030246 ... Q9HYN5 37227046
    771947 8an9:B (1.273) BS01 peptide ? GO:0030246 ... Q9HYN5 37227046
    771948 8an9:B (1.273) BS02 CA ? GO:0030246 ... Q9HYN5 37227046
    771949 8an9:B (1.273) BS03 CA ? GO:0030246 ... Q9HYN5 37227046
    771950 8an9:B (1.273) BS04 ZDC ? GO:0030246 ... Q9HYN5 37227046
    771951 8an9:C (1.273) BS01 CA ? GO:0030246 ... Q9HYN5 37227046
    771952 8an9:C (1.273) BS02 CA ? GO:0030246 ... Q9HYN5 37227046
    771953 8an9:C (1.273) BS03 ZDC ? GO:0030246 ... Q9HYN5 37227046
    771954 8an9:D (1.273) BS01 CA ? GO:0030246 ... Q9HYN5 37227046
    771955 8an9:D (1.273) BS02 CA ? GO:0030246 ... Q9HYN5 37227046
    771956 8an9:D (1.273) BS03 ZDC ? GO:0030246 ... Q9HYN5 37227046
    771957 8ana:0 (2.1) BS01 rna ? GO:0000027 ... P0A7N9 36997646
    771958 8ana:1 (2.1) BS01 rna ? GO:0002181 ... P0A7P5 36997646
    771959 8ana:2 (2.1) BS01 rna ? GO:0002181 ... P0A7Q1 36997646
    771960 8ana:3 (2.1) BS01 rna ? GO:0002181 ... P0A7Q6 36997646
    771961 8ana:3 (2.1) BS02 ZN ? GO:0002181 ... P0A7Q6 36997646
    771962 8ana:4 (2.1) BS01 rna ? GO:0002181 ... P0A7M9 36997646
    771963 8ana:4 (2.1) BS02 ZN ? GO:0002181 ... P0A7M9 36997646
    771964 8ana:c (2.1) BS01 rna ? GO:0000027 ... P60422 36997646
    771965 8ana:d (2.1) BS01 rna ? GO:0000027 ... P60438 36997646
    771966 8ana:e (2.1) BS01 peptide ? GO:0001070 ... P60723 36997646
    771967 8ana:e (2.1) BS02 rna ? GO:0001070 ... P60723 36997646
    771968 8ana:f (2.1) BS01 rna ? GO:0000027 ... P62399 36997646
    771969 8ana:f (2.1) BS02 rna ? GO:0000027 ... P62399 36997646
    771970 8ana:g (2.1) BS01 rna ? GO:0000027 ... P0AG55 36997646
    771971 8ana:h (2.1) BS01 rna ? GO:0002181 ... P0A7R1 36997646
    771972 8ana:i (2.1) BS01 rna ? GO:0002181 ... P0AA10 36997646
    771973 8ana:j (2.1) BS01 rna ? GO:0002181 ... P0ADY3 36997646
    771974 8ana:k (2.1) BS01 rna ? GO:0002181 ... P02413 36997646
    771975 8ana:l (2.1) BS01 rna ? GO:0000027 ... P0ADY7 36997646
    771976 8ana:l (2.1) BS02 rna ? GO:0000027 ... P0ADY7 36997646
    771977 8ana:m (2.1) BS01 rna ? GO:0000027 ... P0AG44 36997646
    771978 8ana:n (2.1) BS01 rna ? GO:0002181 ... P0C018 36997646
    771979 8ana:n (2.1) BS02 rna ? GO:0002181 ... P0C018 36997646
    771980 8ana:o (2.1) BS01 rna ? GO:0000027 ... P0A7K6 36997646
    771981 8ana:p (2.1) BS01 rna ? GO:0000027 ... P0A7L3 36997646
    771982 8ana:q (2.1) BS01 rna ? GO:0002181 ... P0AG48 36997646
    771983 8ana:r (2.1) BS01 peptide ? GO:0002181 ... P61175 36997646
    771984 8ana:r (2.1) BS02 rna ? GO:0002181 ... P61175 36997646
    771985 8ana:s (2.1) BS01 rna ? GO:0000027 ... P0ADZ0 36997646
    771986 8ana:t (2.1) BS01 rna ? GO:0000027 ... P60624 36997646
    771987 8ana:u (2.1) BS01 rna ? GO:0000027 ... P68919 36997646
    771988 8ana:u (2.1) BS02 rna ? GO:0000027 ... P68919 36997646
    771989 8ana:v (2.1) BS01 rna ? GO:0000027 ... P0A7L8 36997646
    771990 8ana:v (2.1) BS02 rna ? GO:0000027 ... P0A7L8 36997646
    771991 8ana:w (2.1) BS01 rna ? GO:0000027 ... P0A7M2 36997646
    771992 8ana:x (2.1) BS01 rna ? GO:0000027 ... P0A7M6 36997646
    771993 8ana:y (2.1) BS01 rna ? GO:0000027 ... P0AG51 36997646
    771994 8ana:y (2.1) BS02 rna ? GO:0000027 ... P0AG51 36997646
    771995 8ana:z (2.1) BS01 rna ? GO:0000027 ... P0A7N4 36997646
    771996 8anb:A (1.64) BS01 peptide ? GO:0001836 ... P31947 N/A
    771997 8anc:A (1.11) BS01 peptide ? GO:0001836 ... P31947 N/A
    771998 8anc:A (1.11) BS02 MG ? GO:0001836 ... P31947 N/A
    771999 8anc:A (1.11) BS03 CA ? GO:0001836 ... P31947 N/A
    772000 8ane:A (3.2) BS01 rna ? N/A B8GLG3 36305833

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).