SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    772001 8ane:B (3.2) BS01 rna ? N/A B8GLG3 36305833
    772002 8ane:C (3.2) BS01 rna ? N/A B8GLG3 36305833
    772003 8ane:D (3.2) BS01 rna ? N/A B8GLG3 36305833
    772004 8ane:E (3.2) BS01 rna ? N/A B8GLG3 36305833
    772005 8ane:F (3.2) BS01 rna ? N/A B8GLG3 36305833
    772006 8ane:G (3.2) BS01 rna ? N/A B8GLG3 36305833
    772007 8anf:A (1.4) BS01 peptide ? GO:0001836 ... P31947 37676236
    772008 8anf:A (1.4) BS02 N1R ? GO:0001836 ... P31947 37676236
    772009 8ano:A (1.29) BS01 peptide ? GO:0030246 ... Q9HYN5 37227046
    772010 8ano:A (1.29) BS02 CA ? GO:0030246 ... Q9HYN5 37227046
    772011 8ano:A (1.29) BS03 CA ? GO:0030246 ... Q9HYN5 37227046
    772012 8ano:A (1.29) BS04 ZDC ? GO:0030246 ... Q9HYN5 37227046
    772013 8ano:B (1.29) BS01 CA ? GO:0030246 ... Q9HYN5 37227046
    772014 8ano:B (1.29) BS02 CA ? GO:0030246 ... Q9HYN5 37227046
    772015 8ano:B (1.29) BS03 ZDC ? GO:0030246 ... Q9HYN5 37227046
    772016 8ano:C (1.29) BS01 CA ? GO:0030246 ... Q9HYN5 37227046
    772017 8ano:C (1.29) BS02 CA ? GO:0030246 ... Q9HYN5 37227046
    772018 8ano:C (1.29) BS03 ZDC ? GO:0030246 ... Q9HYN5 37227046
    772019 8ano:D (1.29) BS01 peptide ? GO:0030246 ... Q9HYN5 37227046
    772020 8ano:D (1.29) BS02 CA ? GO:0030246 ... Q9HYN5 37227046
    772021 8ano:D (1.29) BS03 CA ? GO:0030246 ... Q9HYN5 37227046
    772022 8ano:D (1.29) BS04 ZDC ? GO:0030246 ... Q9HYN5 37227046
    772023 8anp:A (2.2) BS01 MG 3.1.3.- N/A Q5ZXN5 37076474
    772024 8anp:A (2.2) BS02 MG 3.1.3.- N/A Q5ZXN5 37076474
    772025 8anp:B (2.2) BS01 MG 3.1.3.- N/A Q5ZXN5 37076474
    772026 8anp:C (2.2) BS01 MG 3.1.3.- N/A Q5ZXN5 37076474
    772027 8anp:D (2.2) BS01 MG 3.1.3.- N/A Q5ZXN5 37076474
    772028 8anr:A (1.62) BS01 peptide ? GO:0030246 ... Q9HYN5 37227046
    772029 8anr:A (1.62) BS02 CA ? GO:0030246 ... Q9HYN5 37227046
    772030 8anr:A (1.62) BS03 CA ? GO:0030246 ... Q9HYN5 37227046
    772031 8anr:A (1.62) BS04 ZDC ? GO:0030246 ... Q9HYN5 37227046
    772032 8anr:B (1.62) BS01 peptide ? GO:0030246 ... Q9HYN5 37227046
    772033 8anr:B (1.62) BS02 CA ? GO:0030246 ... Q9HYN5 37227046
    772034 8anr:B (1.62) BS03 CA ? GO:0030246 ... Q9HYN5 37227046
    772035 8anr:B (1.62) BS04 ZDC ? GO:0030246 ... Q9HYN5 37227046
    772036 8ans:A (2.01) BS01 MDI 2.7.10.1 GO:0004672 ... P08581 35987508
    772037 8anv:A (2.2) BS01 peptide ? GO:0046872 ... A0ACD6B8Y6 38177302
    772038 8anv:A (2.2) BS02 peptide ? GO:0046872 ... A0ACD6B8Y6 38177302
    772039 8anv:A (2.2) BS03 CA ? GO:0046872 ... A0ACD6B8Y6 38177302
    772040 8anv:B (2.2) BS01 peptide ? GO:0046872 ... A0ACD6B8Y6 38177302
    772041 8anv:B (2.2) BS02 peptide ? GO:0046872 ... A0ACD6B8Y6 38177302
    772042 8any:0 (2.85) BS01 rna ? GO:0003723 ... Q9BYC8 39134711
    772043 8any:0 (2.85) BS02 ZN ? GO:0003723 ... Q9BYC8 39134711
    772044 8any:1 (2.85) BS01 rna ? GO:0003735 ... O75394 39134711
    772045 8any:2 (2.85) BS01 rna ? GO:0003735 ... Q9BQ48 39134711
    772046 8any:3 (2.85) BS01 rna ? GO:0003735 ... Q9NZE8 39134711
    772047 8any:4 (2.85) BS01 rna ? GO:0003735 ... Q9P0J6 39134711
    772048 8any:4 (2.85) BS02 ZN ? GO:0003735 ... Q9P0J6 39134711
    772049 8any:5 (2.85) BS01 rna ? GO:0003723 ... Q9BZE1 39134711
    772050 8any:6 (2.85) BS01 rna ? GO:0005515 ... Q96DV4 39134711
    772051 8any:6 (2.85) BS02 rna ? GO:0005515 ... Q96DV4 39134711
    772052 8any:8 (2.85) BS01 rna ? GO:0003723 ... Q9NQ50 39134711
    772053 8any:8 (2.85) BS02 rna ? GO:0003723 ... Q9NQ50 39134711
    772054 8any:8 (2.85) BS03 rna ? GO:0003723 ... Q9NQ50 39134711
    772055 8any:8 (2.85) BS04 rna ? GO:0003723 ... Q9NQ50 39134711
    772056 8any:9 (2.85) BS01 rna ? GO:0003723 ... Q8IXM3 39134711
    772057 8any:A0 (2.85) BS01 rna ? GO:0003735 ... P82930 39134711
    772058 8any:A2 (2.85) BS01 rna ? GO:0001650 ... Q96BP2 39134711
    772059 8any:A3 (2.85) BS01 rna ? GO:0005515 ... Q9NWT8 39134711
    772060 8any:A3 (2.85) BS02 rna ? GO:0005515 ... Q9NWT8 39134711
    772061 8any:A4 (2.85) BS01 rna ? GO:0003723 ... Q96EY7 39134711
    772062 8any:A5 (2.85) BS01 rna ? GO:0000794 ... P42704 39134711
    772063 8any:A6 (2.85) BS01 rna ? GO:0001669 ... Q9GZT3 39134711
    772064 8any:AB (2.85) BS01 rna ? GO:0003735 ... Q9Y399 39134711
    772065 8any:AB (2.85) BS02 MG ? GO:0003735 ... Q9Y399 39134711
    772066 8any:AC (2.85) BS01 rna ? GO:0003723 ... Q96EL2 39134711
    772067 8any:AD (2.85) BS01 rna ? GO:0003723 ... P82675 39134711
    772068 8any:AD (2.85) BS02 rna ? GO:0003723 ... P82675 39134711
    772069 8any:AE (2.85) BS01 rna ? GO:0003735 ... P82932 39134711
    772070 8any:AF (2.85) BS01 rna ? GO:0003723 ... Q9Y2R9 39134711
    772071 8any:AF (2.85) BS02 rna ? GO:0003723 ... Q9Y2R9 39134711
    772072 8any:AF (2.85) BS03 rna ? GO:0003723 ... Q9Y2R9 39134711
    772073 8any:AG (2.85) BS01 rna ? GO:0003723 ... P82933 39134711
    772074 8any:AG (2.85) BS02 rna ? GO:0003723 ... P82933 39134711
    772075 8any:AG (2.85) BS03 rna ? GO:0003723 ... P82933 39134711
    772076 8any:AH (2.85) BS01 rna ? GO:0005739 ... P82664 39134711
    772077 8any:AI (2.85) BS01 rna ? GO:0003723 ... P82912 39134711
    772078 8any:AJ (2.85) BS01 rna ? GO:0003723 ... O15235 39134711
    772079 8any:AK (2.85) BS01 rna ? GO:0003723 ... O60783 39134711
    772080 8any:AL (2.85) BS01 rna ? GO:0003723 ... P82914 39134711
    772081 8any:AL (2.85) BS02 NAD ? GO:0003723 ... P82914 39134711
    772082 8any:AM (2.85) BS01 rna ? GO:0003735 ... Q9Y3D3 39134711
    772083 8any:AN (2.85) BS01 rna ? GO:0003735 ... Q9Y2R5 39134711
    772084 8any:AO (2.85) BS01 rna ? GO:0003735 ... Q9Y676 39134711
    772085 8any:AO (2.85) BS02 ZN ? GO:0003735 ... Q9Y676 39134711
    772086 8any:AP (2.85) BS01 rna ? GO:0003735 ... Q9Y3D5 39134711
    772087 8any:AP (2.85) BS02 FES ? GO:0003735 ... Q9Y3D5 39134711
    772088 8any:AQ (2.85) BS01 rna ? GO:0003723 ... P82921 39134711
    772089 8any:AS (2.85) BS01 rna ? GO:0003723 ... Q9Y3D9 39134711
    772090 8any:AT (2.85) BS01 rna ? GO:0003735 ... P82663 39134711
    772091 8any:AT (2.85) BS02 FES ? GO:0003735 ... P82663 39134711
    772092 8any:AU (2.85) BS01 rna ? GO:0003723 ... Q9BYN8 39134711
    772093 8any:AV (2.85) BS01 rna ? GO:0000049 ... Q92552 39134711
    772094 8any:AX (2.85) BS01 rna ? GO:0003723 ... P51398 39134711
    772095 8any:AX (2.85) BS02 ATP ? GO:0003723 ... P51398 39134711
    772096 8any:AX (2.85) BS03 GDP ? GO:0003723 ... P51398 39134711
    772097 8any:AZ (2.85) BS01 rna ? GO:0003735 ... Q9Y291 39134711
    772098 8any:D (2.85) BS01 rna ? GO:0003723 ... Q5T653 39134711
    772099 8any:E (2.85) BS01 rna ? GO:0003723 ... P09001 39134711
    772100 8any:F (2.85) BS01 rna ? GO:0003723 ... Q9BYD3 39134711
    772101 8any:H (2.85) BS01 rna ? GO:0003723 ... Q9BYD2 39134711
    772102 8any:I (2.85) BS01 rna ? GO:0003723 ... Q7Z7H8 39134711
    772103 8any:J (2.85) BS01 rna ? GO:0003723 ... Q9Y3B7 39134711
    772104 8any:K (2.85) BS01 rna ? GO:0003723 ... Q9BYD1 39134711
    772105 8any:L (2.85) BS01 rna ? GO:0003723 ... Q6P1L8 39134711
    772106 8any:M (2.85) BS01 rna ? GO:0003723 ... Q9P015 39134711
    772107 8any:N (2.85) BS01 rna ? GO:0003735 ... Q9NX20 39134711
    772108 8any:N (2.85) BS02 rna ? GO:0003735 ... Q9NX20 39134711
    772109 8any:O (2.85) BS01 rna ? GO:0003735 ... Q9NRX2 39134711
    772110 8any:P (2.85) BS01 rna ? GO:0003735 ... Q9H0U6 39134711
    772111 8any:P (2.85) BS02 rna ? GO:0003735 ... Q9H0U6 39134711
    772112 8any:Q (2.85) BS01 rna ? GO:0003735 ... P49406 39134711
    772113 8any:R (2.85) BS01 rna ? GO:0003723 ... Q9BYC9 39134711
    772114 8any:S (2.85) BS01 rna ? GO:0003723 ... Q7Z2W9 39134711
    772115 8any:T (2.85) BS01 rna ? GO:0003723 ... Q9NWU5 39134711
    772116 8any:U (2.85) BS01 rna ? GO:0003723 ... Q16540 39134711
    772117 8any:V (2.85) BS01 rna ? GO:0003723 ... Q96A35 39134711
    772118 8any:W (2.85) BS01 rna ? GO:0003723 ... Q9P0M9 39134711
    772119 8any:X (2.85) BS01 rna ? GO:0003723 ... Q13084 39134711
    772120 8any:Y (2.85) BS01 rna ? GO:0003735 ... Q9HD33 39134711
    772121 8any:Z (2.85) BS01 rna ? GO:0003735 ... Q8TCC3 39134711
    772122 8any:a (2.85) BS01 rna ? GO:0003723 ... Q9Y6G3 39134711
    772123 8any:b (2.85) BS01 rna ? GO:0003723 ... Q8N983 39134711
    772124 8any:c (2.85) BS01 rna 3.1.26.- GO:0003723 ... Q9H9J2 39134711
    772125 8any:d (2.85) BS01 rna ? GO:0003723 ... Q9BRJ2 39134711
    772126 8any:e (2.85) BS01 rna ? GO:0003735 ... Q9H2W6 39134711
    772127 8any:f (2.85) BS01 rna ? GO:0005515 ... Q96GC5 39134711
    772128 8any:f (2.85) BS02 rna ? GO:0005515 ... Q96GC5 39134711
    772129 8any:f (2.85) BS03 rna ? GO:0005515 ... Q96GC5 39134711
    772130 8any:g (2.85) BS01 rna ? GO:0003735 ... Q13405 39134711
    772131 8any:i (2.85) BS01 rna ? GO:0003735 ... Q4U2R6 39134711
    772132 8any:j (2.85) BS01 rna ? GO:0003735 ... Q86TS9 39134711
    772133 8any:l (2.85) BS01 rna ? GO:0003723 ... Q6P161 39134711
    772134 8any:o (2.85) BS01 rna ? GO:0003735 ... Q9BQC6 39134711
    772135 8any:q (2.85) BS01 rna ? GO:0003735 ... Q8TAE8 39134711
    772136 8any:r (2.85) BS01 rna ? GO:0003735 ... Q9NVS2 39134711
    772137 8any:r (2.85) BS02 FES ? GO:0003735 ... Q9NVS2 39134711
    772138 8any:s (2.85) BS01 rna ? GO:0003723 ... Q9NP92 39134711
    772139 8any:z (2.85) BS01 rna ? GO:0003723 ... Q9BYD6 39134711
    772140 8any:z (2.85) BS02 rna ? GO:0003723 ... Q9BYD6 39134711
    772141 8ao0:A (-1.00) BS01 O1F ? GO:0006355 ... P16113 36232662
    772142 8ao2:A (1.796) BS01 NXI 2.7.11.24 GO:0000165 ... P28482 36101934
    772143 8ao3:A (1.778) BS01 NYX 2.7.11.24 GO:0000165 ... P28482 36101934
    772144 8ao4:A (1.825) BS01 N8U 2.7.11.24 GO:0000165 ... P28482 36101934
    772145 8ao5:A (1.595) BS01 N6K 2.7.11.24 GO:0000165 ... P28482 36101934
    772146 8ao6:A (1.811) BS01 N9F 2.7.11.24 GO:0000165 ... P28482 36101934
    772147 8ao7:A (1.61) BS01 N3X 2.7.11.24 GO:0000165 ... P28482 36101934
    772148 8ao8:A (1.697) BS01 N5U 2.7.11.24 GO:0000165 ... P28482 36101934
    772149 8ao9:A (1.624) BS01 N4F 2.7.11.24 GO:0000165 ... P28482 36101934
    772150 8aoa:A (1.62) BS01 N83 2.7.11.24 GO:0000165 ... P28482 36101934
    772151 8aoa:A (1.62) BS02 OZU 2.7.11.24 GO:0000165 ... P28482 36101934
    772152 8aob:A (1.623) BS01 NB3 2.7.11.24 GO:0000165 ... P28482 36101934
    772153 8aoc:A (1.62) BS01 N3O 2.7.11.24 GO:0000165 ... P28482 36101934
    772154 8aod:A (1.62) BS01 NY0 2.7.11.24 GO:0000165 ... P28482 36101934
    772155 8aoe:A (1.687) BS01 N6U 2.7.11.24 GO:0000165 ... P28482 36101934
    772156 8aof:A (1.615) BS01 N4U 2.7.11.24 GO:0000165 ... P28482 36101934
    772157 8aog:A (1.603) BS01 N29 2.7.11.24 GO:0000165 ... P28482 36101934
    772158 8aog:A (1.603) BS02 N29 2.7.11.24 GO:0000165 ... P28482 36101934
    772159 8aog:A (1.603) BS03 N29 2.7.11.24 GO:0000165 ... P28482 36101934
    772160 8aoh:A (1.6) BS01 N96 2.7.11.24 GO:0000165 ... P28482 36101934
    772161 8aoh:A (1.6) BS02 N96 2.7.11.24 GO:0000165 ... P28482 36101934
    772162 8aoi:A (1.602) BS01 NX0 2.7.11.24 GO:0000165 ... P28482 36101934
    772163 8aoi:A (1.602) BS02 NX0 2.7.11.24 GO:0000165 ... P28482 36101934
    772164 8aoj:A (1.12) BS01 N8L 2.7.11.24 GO:0000165 ... P28482 36101934
    772165 8aol:A (2.4) BS01 ZN ? N/A Q5FLN0 38838019
    772166 8aoo:A (1.18) BS01 peptide ? GO:0030246 ... Q9HYN5 37227046
    772167 8aoo:A (1.18) BS02 CA ? GO:0030246 ... Q9HYN5 37227046
    772168 8aoo:A (1.18) BS03 CA ? GO:0030246 ... Q9HYN5 37227046
    772169 8aoo:A (1.18) BS04 ZDC ? GO:0030246 ... Q9HYN5 37227046
    772170 8aoo:B (1.18) BS01 CA ? GO:0030246 ... Q9HYN5 37227046
    772171 8aoo:B (1.18) BS02 CA ? GO:0030246 ... Q9HYN5 37227046
    772172 8aoo:B (1.18) BS03 ZDC ? GO:0030246 ... Q9HYN5 37227046
    772173 8aoo:C (1.18) BS01 CA ? GO:0030246 ... Q9HYN5 37227046
    772174 8aoo:C (1.18) BS02 CA ? GO:0030246 ... Q9HYN5 37227046
    772175 8aoo:C (1.18) BS03 ZDC ? GO:0030246 ... Q9HYN5 37227046
    772176 8aoo:D (1.18) BS01 CA ? GO:0030246 ... Q9HYN5 37227046
    772177 8aoo:D (1.18) BS02 CA ? GO:0030246 ... Q9HYN5 37227046
    772178 8aoo:D (1.18) BS03 ZDC ? GO:0030246 ... Q9HYN5 37227046
    772179 8aop:A (1.944) BS01 ZN ? N/A A4TVL0 36476642
    772180 8aop:A (1.944) BS02 MW6 ? N/A A4TVL0 36476642
    772181 8aop:B (1.944) BS01 ZN ? N/A A4TVL0 36476642
    772182 8aop:B (1.944) BS02 MW6 ? N/A A4TVL0 36476642
    772183 8aop:C (1.944) BS01 ZN ? N/A A4TVL0 36476642
    772184 8aoq:A (2.088) BS01 ZN ? N/A A4TVL0 36476642
    772185 8aoq:A (2.088) BS02 N8F ? N/A A4TVL0 36476642
    772186 8aoq:B (2.088) BS01 ZN ? N/A A4TVL0 36476642
    772187 8aoq:B (2.088) BS02 N8F ? N/A A4TVL0 36476642
    772188 8aoq:C (2.088) BS01 ZN ? N/A A4TVL0 36476642
    772189 8aov:A (2.48) BS01 ZN 2.1.1.-
    2.7.7.-
    2.7.7.19
    2.7.7.48
    3.1.3.84
    3.4.22.-
    3.6.1.15
    3.6.1.74
    3.6.4.13
    GO:0003723 ... Q8JUX6 36913573
    772190 8aov:A (2.48) BS02 GTP 2.1.1.-
    2.7.7.-
    2.7.7.19
    2.7.7.48
    3.1.3.84
    3.4.22.-
    3.6.1.15
    3.6.1.74
    3.6.4.13
    GO:0003723 ... Q8JUX6 36913573
    772191 8aov:C (2.48) BS01 ZN 2.1.1.-
    2.7.7.-
    2.7.7.19
    2.7.7.48
    3.1.3.84
    3.4.22.-
    3.6.1.15
    3.6.1.74
    3.6.4.13
    GO:0003723 ... Q8JUX6 36913573
    772192 8aov:C (2.48) BS02 GTP 2.1.1.-
    2.7.7.-
    2.7.7.19
    2.7.7.48
    3.1.3.84
    3.4.22.-
    3.6.1.15
    3.6.1.74
    3.6.4.13
    GO:0003723 ... Q8JUX6 36913573
    772193 8aov:E (2.48) BS01 ZN 2.1.1.-
    2.7.7.-
    2.7.7.19
    2.7.7.48
    3.1.3.84
    3.4.22.-
    3.6.1.15
    3.6.1.74
    3.6.4.13
    GO:0003723 ... Q8JUX6 36913573
    772194 8aov:E (2.48) BS02 GTP 2.1.1.-
    2.7.7.-
    2.7.7.19
    2.7.7.48
    3.1.3.84
    3.4.22.-
    3.6.1.15
    3.6.1.74
    3.6.4.13
    GO:0003723 ... Q8JUX6 36913573
    772195 8aov:G (2.48) BS01 ZN 2.1.1.-
    2.7.7.-
    2.7.7.19
    2.7.7.48
    3.1.3.84
    3.4.22.-
    3.6.1.15
    3.6.1.74
    3.6.4.13
    GO:0003723 ... Q8JUX6 36913573
    772196 8aov:G (2.48) BS02 GTP 2.1.1.-
    2.7.7.-
    2.7.7.19
    2.7.7.48
    3.1.3.84
    3.4.22.-
    3.6.1.15
    3.6.1.74
    3.6.4.13
    GO:0003723 ... Q8JUX6 36913573
    772197 8aov:I (2.48) BS01 ZN 2.1.1.-
    2.7.7.-
    2.7.7.19
    2.7.7.48
    3.1.3.84
    3.4.22.-
    3.6.1.15
    3.6.1.74
    3.6.4.13
    GO:0003723 ... Q8JUX6 36913573
    772198 8aov:I (2.48) BS02 GTP 2.1.1.-
    2.7.7.-
    2.7.7.19
    2.7.7.48
    3.1.3.84
    3.4.22.-
    3.6.1.15
    3.6.1.74
    3.6.4.13
    GO:0003723 ... Q8JUX6 36913573
    772199 8aov:K (2.48) BS01 ZN 2.1.1.-
    2.7.7.-
    2.7.7.19
    2.7.7.48
    3.1.3.84
    3.4.22.-
    3.6.1.15
    3.6.1.74
    3.6.4.13
    GO:0003723 ... Q8JUX6 36913573
    772200 8aov:K (2.48) BS02 GTP 2.1.1.-
    2.7.7.-
    2.7.7.19
    2.7.7.48
    3.1.3.84
    3.4.22.-
    3.6.1.15
    3.6.1.74
    3.6.4.13
    GO:0003723 ... Q8JUX6 36913573

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).