SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    772001 8bav:C (2.3) BS03 CA ? GO:0005509 ... O76038 38593081
    772002 8bav:C (2.3) BS04 CA ? GO:0005509 ... O76038 38593081
    772003 8bav:D (2.3) BS01 CA ? GO:0005509 ... O76038 38593081
    772004 8bav:D (2.3) BS02 CA ? GO:0005509 ... O76038 38593081
    772005 8bav:D (2.3) BS03 CA ? GO:0005509 ... O76038 38593081
    772006 8bav:D (2.3) BS04 CA ? GO:0005509 ... O76038 38593081
    772007 8baw:A (1.471) BS01 FE N/A GO:0006826 ... N/A 37428843
    772008 8baw:A (1.471) BS02 5LC N/A GO:0006826 ... N/A 37428843
    772009 8baw:B (1.471) BS01 FE N/A GO:0006826 ... N/A 37428843
    772010 8baw:B (1.471) BS02 5LC N/A GO:0006826 ... N/A 37428843
    772011 8bax:A (1.38) BS01 FE N/A GO:0006826 ... N/A 37428843
    772012 8bax:A (1.38) BS02 95B N/A GO:0006826 ... N/A 37428843
    772013 8bay:A (2.35) BS01 NDP 1.1.1.42 GO:0000287 ... O75874 36621625
    772014 8bay:A (2.35) BS02 QDC 1.1.1.42 GO:0000287 ... O75874 36621625
    772015 8bay:A (2.35) BS03 QD8 1.1.1.42 GO:0000287 ... O75874 36621625
    772016 8bay:A (2.35) BS04 CA 1.1.1.42 GO:0000287 ... O75874 36621625
    772017 8bay:B (2.35) BS01 CA 1.1.1.42 GO:0000287 ... O75874 36621625
    772018 8bay:B (2.35) BS02 NDP 1.1.1.42 GO:0000287 ... O75874 36621625
    772019 8bay:B (2.35) BS03 QDC 1.1.1.42 GO:0000287 ... O75874 36621625
    772020 8bay:B (2.35) BS04 QD8 1.1.1.42 GO:0000287 ... O75874 36621625
    772021 8bay:C (2.35) BS01 NDP 1.1.1.42 GO:0000287 ... O75874 36621625
    772022 8bay:C (2.35) BS02 QDC 1.1.1.42 GO:0000287 ... O75874 36621625
    772023 8bay:C (2.35) BS03 QD8 1.1.1.42 GO:0000287 ... O75874 36621625
    772024 8bay:C (2.35) BS04 CA 1.1.1.42 GO:0000287 ... O75874 36621625
    772025 8baz:A (2.0) BS01 CBY ? N/A Q8A6D0 N/A
    772026 8baz:B (2.0) BS01 CBY ? N/A Q8A6D0 N/A
    772027 8bb0:A (1.5) BS01 I2A ? N/A Q8A6D0 N/A
    772028 8bb0:B (1.5) BS01 I2A ? N/A Q8A6D0 N/A
    772029 8bb2:B (2.05) BS01 Q3X ? GO:0000122 ... P61964 N/A
    772030 8bb2:L (2.05) BS01 Q3X ? N/A P40337 N/A
    772031 8bb3:B (1.8) BS01 Q3X ? GO:0000122 ... P61964 N/A
    772032 8bb3:L (1.8) BS01 Q3X ? N/A P40337 N/A
    772033 8bb4:P (2.8) BS01 Q3R ? N/A P40337 37354907
    772034 8bb4:Q (2.8) BS01 Q3R ? GO:0000122 ... P61964 37354907
    772035 8bb5:C (2.2) BS01 Q43 ? N/A P40337 37354907
    772036 8bb5:D (2.2) BS01 Q43 ? GO:0000122 ... P61964 37354907
    772037 8bb8:A (1.8) BS01 OYA 1.2.1.5 GO:0004028 ... P30838 36966166
    772038 8bb8:B (1.8) BS01 OYA 1.2.1.5 GO:0004028 ... P30838 36966166
    772039 8bb9:A (1.68) BS01 ACV 1.21.3.1 GO:0005506 ... P05326 N/A
    772040 8bb9:A (1.68) BS02 FE 1.21.3.1 GO:0005506 ... P05326 N/A
    772041 8bba:A (1.5) BS01 ACV 1.21.3.1 GO:0005506 ... P05326 N/A
    772042 8bba:A (1.5) BS02 FE 1.21.3.1 GO:0005506 ... P05326 N/A
    772043 8bbb:A (1.57) BS01 ACV 1.21.3.1 GO:0005506 ... P05326 N/A
    772044 8bbc:A (1.71) BS01 ACV 1.21.3.1 GO:0005506 ... P05326 N/A
    772045 8bbc:A (1.71) BS02 FE 1.21.3.1 GO:0005506 ... P05326 N/A
    772046 8bbd:A (1.81) BS01 ACV 1.21.3.1 GO:0005506 ... P05326 N/A
    772047 8bbh:H (1.619) BS01 peptide N/A N/A N/A 36858822
    772048 8bbh:L (1.619) BS01 peptide N/A N/A N/A 36858822
    772049 8bbi:A (2.1) BS01 IPT 3.2.1.8 GO:0004553 ... F7YXD6 N/A
    772050 8bbi:B (2.1) BS01 IPT 3.2.1.8 GO:0004553 ... F7YXD6 N/A
    772051 8bbj:C (2.65) BS01 CA ? GO:0005509 ... Q91WD9 38593081
    772052 8bbj:C (2.65) BS02 CA ? GO:0005509 ... Q91WD9 38593081
    772053 8bbj:C (2.65) BS03 CA ? GO:0005509 ... Q91WD9 38593081
    772054 8bbj:C (2.65) BS04 CA ? GO:0005509 ... Q91WD9 38593081
    772055 8bbj:D (2.65) BS01 CA ? GO:0005509 ... Q91WD9 38593081
    772056 8bbj:D (2.65) BS02 CA ? GO:0005509 ... Q91WD9 38593081
    772057 8bbj:D (2.65) BS03 CA ? GO:0005509 ... Q91WD9 38593081
    772058 8bbj:D (2.65) BS04 CA ? GO:0005509 ... Q91WD9 38593081
    772059 8bbk:A (3.27) BS01 peptide 2.3.1.286 GO:0003950 ... Q9NTG7 36361557
    772060 8bbk:A (3.27) BS02 ZN 2.3.1.286 GO:0003950 ... Q9NTG7 36361557
    772061 8bbk:B (3.27) BS01 peptide 2.3.1.286 GO:0003950 ... Q9NTG7 36361557
    772062 8bbk:B (3.27) BS02 ZN 2.3.1.286 GO:0003950 ... Q9NTG7 36361557
    772063 8bbk:C (3.27) BS01 peptide 2.3.1.286 GO:0003950 ... Q9NTG7 36361557
    772064 8bbk:C (3.27) BS02 ZN 2.3.1.286 GO:0003950 ... Q9NTG7 36361557
    772065 8bbk:D (3.27) BS01 peptide 2.3.1.286 GO:0003950 ... Q9NTG7 36361557
    772066 8bbk:D (3.27) BS02 ZN 2.3.1.286 GO:0003950 ... Q9NTG7 36361557
    772067 8bbk:E (3.27) BS01 peptide 2.3.1.286 GO:0003950 ... Q9NTG7 36361557
    772068 8bbk:E (3.27) BS02 ZN 2.3.1.286 GO:0003950 ... Q9NTG7 36361557
    772069 8bbk:F (3.27) BS01 peptide 2.3.1.286 GO:0003950 ... Q9NTG7 36361557
    772070 8bbk:F (3.27) BS02 ZN 2.3.1.286 GO:0003950 ... Q9NTG7 36361557
    772071 8bbq:A (1.43) BS01 CU N/A GO:0016491 ... N/A 37759761
    772072 8bbq:A (1.43) BS02 CU N/A GO:0016491 ... N/A 37759761
    772073 8bbq:B (1.43) BS01 CU N/A GO:0016491 ... N/A 37759761
    772074 8bbq:B (1.43) BS02 CU N/A GO:0016491 ... N/A 37759761
    772075 8bbr:A (1.64) BS01 CU N/A GO:0016491 ... N/A 37759761
    772076 8bbr:A (1.64) BS02 CU N/A GO:0016491 ... N/A 37759761
    772077 8bbr:B (1.64) BS01 CU N/A GO:0016491 ... N/A 37759761
    772078 8bbr:B (1.64) BS02 CU N/A GO:0016491 ... N/A 37759761
    772079 8bbs:A (1.4) BS01 NAP 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64
    GO:0001523 ... P42330 36846371
    772080 8bbs:A (1.4) BS02 QBO 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64
    GO:0001523 ... P42330 36846371
    772081 8bbs:B (1.4) BS01 NAP 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64
    GO:0001523 ... P42330 36846371
    772082 8bbs:B (1.4) BS02 QBO 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64
    GO:0001523 ... P42330 36846371
    772083 8bbt:A (1.69) BS01 CA ? GO:0046872 ... A0A0B4VFQ3 37443157
    772084 8bbu:A (1.1) BS01 NA 3.2.1.17 GO:0003796 ... Q25091 37095116
    772085 8bbu:B (1.1) BS01 NA 3.2.1.17 GO:0003796 ... Q25091 37095116
    772086 8bbv:A (2.19) BS01 HT9 4.99.1.9 GO:0004325 ... Q8Y565 37743577
    772087 8bbx:A (2.7) BS01 MAN ? GO:0006508 ... A0A3F3RXI7 38059672
    772088 8bbx:A (2.7) BS02 MAN ? GO:0006508 ... A0A3F3RXI7 38059672
    772089 8bbx:A (2.7) BS03 MAN ? GO:0006508 ... A0A3F3RXI7 38059672
    772090 8bbx:B (2.7) BS01 MAN ? GO:0006508 ... A0A3F3RXI7 38059672
    772091 8bbx:B (2.7) BS02 MAN ? GO:0006508 ... A0A3F3RXI7 38059672
    772092 8bbz:CCC (2.2) BS01 ZN ? GO:0046872 ... A0A482M8M0 N/A
    772093 8bc0:A (3.09) BS01 CA ? GO:0002407 ... Q6P9J9 36335104
    772094 8bc0:A (3.09) BS02 CA ? GO:0002407 ... Q6P9J9 36335104
    772095 8bc0:A (3.09) BS03 CA ? GO:0002407 ... Q6P9J9 36335104
    772096 8bc0:B (3.09) BS01 CA ? GO:0002407 ... Q6P9J9 36335104
    772097 8bc0:B (3.09) BS02 CA ? GO:0002407 ... Q6P9J9 36335104
    772098 8bc0:B (3.09) BS03 CA ? GO:0002407 ... Q6P9J9 36335104
    772099 8bc1:A (2.93) BS01 CA ? GO:0002407 ... Q6P9J9 36335104
    772100 8bc1:A (2.93) BS02 CA ? GO:0002407 ... Q6P9J9 36335104
    772101 8bc1:A (2.93) BS03 CA ? GO:0002407 ... Q6P9J9 36335104
    772102 8bc1:B (2.93) BS01 CA ? GO:0002407 ... Q6P9J9 36335104
    772103 8bc1:B (2.93) BS02 CA ? GO:0002407 ... Q6P9J9 36335104
    772104 8bc1:B (2.93) BS03 CA ? GO:0002407 ... Q6P9J9 36335104
    772105 8bc3:A (2.1) BS01 QC9 2.2.1.14 GO:0004801 ... D5E1T2 36805128
    772106 8bc3:B (2.1) BS01 QC9 2.2.1.14 GO:0004801 ... D5E1T2 36805128
    772107 8bc3:C (2.1) BS01 QC9 2.2.1.14 GO:0004801 ... D5E1T2 36805128
    772108 8bc3:D (2.1) BS01 QC9 2.2.1.14 GO:0004801 ... D5E1T2 36805128
    772109 8bc3:E (2.1) BS01 QC9 2.2.1.14 GO:0004801 ... D5E1T2 36805128
    772110 8bc3:F (2.1) BS01 QC9 2.2.1.14 GO:0004801 ... D5E1T2 36805128
    772111 8bc3:G (2.1) BS01 QC9 2.2.1.14 GO:0004801 ... D5E1T2 36805128
    772112 8bc3:H (2.1) BS01 QC9 2.2.1.14 GO:0004801 ... D5E1T2 36805128
    772113 8bc3:I (2.1) BS01 QC9 2.2.1.14 GO:0004801 ... D5E1T2 36805128
    772114 8bc3:J (2.1) BS01 QC9 2.2.1.14 GO:0004801 ... D5E1T2 36805128
    772115 8bc4:A (2.7) BS01 QC9 2.2.1.14 GO:0004801 ... D5E1T2 36805128
    772116 8bc4:B (2.7) BS01 QC9 2.2.1.14 GO:0004801 ... D5E1T2 36805128
    772117 8bc4:C (2.7) BS01 QC9 2.2.1.14 GO:0004801 ... D5E1T2 36805128
    772118 8bc4:D (2.7) BS01 QC9 2.2.1.14 GO:0004801 ... D5E1T2 36805128
    772119 8bc4:E (2.7) BS01 QC9 2.2.1.14 GO:0004801 ... D5E1T2 36805128
    772120 8bc4:F (2.7) BS01 QC9 2.2.1.14 GO:0004801 ... D5E1T2 36805128
    772121 8bc4:G (2.7) BS01 QC9 2.2.1.14 GO:0004801 ... D5E1T2 36805128
    772122 8bc4:H (2.7) BS01 QC9 2.2.1.14 GO:0004801 ... D5E1T2 36805128
    772123 8bc4:J (2.7) BS01 QC9 2.2.1.14 GO:0004801 ... D5E1T2 36805128
    772124 8bc5:A (1.91) BS01 CA ? GO:0046872 ... A0A0B4VFQ3 37443157
    772125 8bc6:A (1.72) BS01 peptide ? GO:0046872 ... A4TVL0 36375252
    772126 8bc6:A (1.72) BS02 ZN ? GO:0046872 ... A4TVL0 36375252
    772127 8bc6:B (1.72) BS01 peptide ? GO:0046872 ... A4TVL0 36375252
    772128 8bc6:B (1.72) BS02 ZN ? GO:0046872 ... A4TVL0 36375252
    772129 8bc6:C (1.72) BS01 ZN ? GO:0046872 ... A4TVL0 36375252
    772130 8bc7:A (1.719) BS01 ZN ? GO:0046872 ... A4TVL0 36375252
    772131 8bc7:A (1.719) BS02 EF2 ? GO:0046872 ... A4TVL0 36375252
    772132 8bc7:B (1.719) BS01 peptide ? GO:0046872 ... A4TVL0 36375252
    772133 8bc7:B (1.719) BS02 ZN ? GO:0046872 ... A4TVL0 36375252
    772134 8bc7:C (1.719) BS01 ZN ? GO:0046872 ... A4TVL0 36375252
    772135 8bc7:C (1.719) BS02 EF2 ? GO:0046872 ... A4TVL0 36375252
    772136 8bc8:B (2.39) BS01 QB6 3.6.4.13 GO:0003676 ... O75643 36974964
    772137 8bc8:B (2.39) BS02 QB6 3.6.4.13 GO:0003676 ... O75643 36974964
    772138 8bc8:B (2.39) BS03 QB6 3.6.4.13 GO:0003676 ... O75643 36974964
    772139 8bc8:J (2.39) BS01 QB6 ? GO:0000398 ... Q6P2Q9 36974964
    772140 8bc9:B (2.3) BS01 A09 3.6.4.13 GO:0003676 ... O75643 36974964
    772141 8bca:B (2.8) BS01 Q96 3.6.4.13 GO:0003676 ... O75643 36974964
    772142 8bca:B (2.8) BS02 Q96 3.6.4.13 GO:0003676 ... O75643 36974964
    772143 8bcb:B (2.38) BS01 SAN 3.6.4.13 GO:0003676 ... O75643 36974964
    772144 8bcb:B (2.38) BS02 SAN 3.6.4.13 GO:0003676 ... O75643 36974964
    772145 8bcc:B (2.35) BS01 QAU 3.6.4.13 GO:0003676 ... O75643 36974964
    772146 8bcc:B (2.35) BS02 QAU 3.6.4.13 GO:0003676 ... O75643 36974964
    772147 8bcc:B (2.35) BS03 QAU 3.6.4.13 GO:0003676 ... O75643 36974964
    772148 8bcd:B (3.5) BS01 QB0 3.6.4.13 GO:0003676 ... O75643 36974964
    772149 8bce:B (2.05) BS01 B09 3.6.4.13 GO:0003676 ... O75643 36974964
    772150 8bcf:B (2.42) BS01 Q8Z 3.6.4.13 GO:0003676 ... O75643 36974964
    772151 8bcg:B (2.39) BS01 Q9I 3.6.4.13 GO:0003676 ... O75643 36974964
    772152 8bch:B (2.87) BS01 QA9 3.6.4.13 GO:0003676 ... O75643 36974964
    772153 8bcj:A (1.15) BS01 NAP ? GO:0000166 ... Q9HZ96 N/A
    772154 8bcj:B (1.15) BS01 NAP ? GO:0000166 ... Q9HZ96 N/A
    772155 8bcj:C (1.15) BS01 NAP ? GO:0000166 ... Q9HZ96 N/A
    772156 8bcj:D (1.15) BS01 NAP ? GO:0000166 ... Q9HZ96 N/A
    772157 8bck:A (1.96) BS01 CA ? GO:0046872 ... A0A0B4VFQ3 37443157
    772158 8bcr:A (1.9) BS01 SAM 3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004482 ... A9LIE0 36905944
    772159 8bcr:B (1.9) BS01 AT9 3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004482 ... A9LIE0 36905944
    772160 8bcr:B (1.9) BS02 SAH 3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004482 ... A9LIE0 36905944
    772161 8bcv:1 (2.2) BS01 CHL ? GO:0009507 ... A0A482JYH1 N/A
    772162 8bcv:1 (2.2) BS02 CLA ? GO:0009507 ... A0A482JYH1 N/A
    772163 8bcv:1 (2.2) BS03 CLA ? GO:0009507 ... A0A482JYH1 N/A
    772164 8bcv:1 (2.2) BS04 CLA ? GO:0009507 ... A0A482JYH1 N/A
    772165 8bcv:1 (2.2) BS05 CLA ? GO:0009507 ... A0A482JYH1 N/A
    772166 8bcv:1 (2.2) BS06 CHL ? GO:0009507 ... A0A482JYH1 N/A
    772167 8bcv:1 (2.2) BS07 CLA ? GO:0009507 ... A0A482JYH1 N/A
    772168 8bcv:1 (2.2) BS08 CLA ? GO:0009507 ... A0A482JYH1 N/A
    772169 8bcv:1 (2.2) BS09 CLA ? GO:0009507 ... A0A482JYH1 N/A
    772170 8bcv:1 (2.2) BS10 CLA ? GO:0009507 ... A0A482JYH1 N/A
    772171 8bcv:1 (2.2) BS11 CLA ? GO:0009507 ... A0A482JYH1 N/A
    772172 8bcv:1 (2.2) BS12 CLA ? GO:0009507 ... A0A482JYH1 N/A
    772173 8bcv:1 (2.2) BS13 CLA ? GO:0009507 ... A0A482JYH1 N/A
    772174 8bcv:1 (2.2) BS14 CLA ? GO:0009507 ... A0A482JYH1 N/A
    772175 8bcv:2 (2.2) BS01 CLA N/A GO:0009765 ... N/A N/A
    772176 8bcv:2 (2.2) BS02 CLA N/A GO:0009765 ... N/A N/A
    772177 8bcv:2 (2.2) BS03 CLA N/A GO:0009765 ... N/A N/A
    772178 8bcv:2 (2.2) BS04 CHL N/A GO:0009765 ... N/A N/A
    772179 8bcv:2 (2.2) BS05 CHL N/A GO:0009765 ... N/A N/A
    772180 8bcv:2 (2.2) BS06 CHL N/A GO:0009765 ... N/A N/A
    772181 8bcv:2 (2.2) BS07 CLA N/A GO:0009765 ... N/A N/A
    772182 8bcv:2 (2.2) BS08 CLA N/A GO:0009765 ... N/A N/A
    772183 8bcv:2 (2.2) BS09 CLA N/A GO:0009765 ... N/A N/A
    772184 8bcv:2 (2.2) BS10 CLA N/A GO:0009765 ... N/A N/A
    772185 8bcv:2 (2.2) BS11 CLA N/A GO:0009765 ... N/A N/A
    772186 8bcv:2 (2.2) BS12 CHL N/A GO:0009765 ... N/A N/A
    772187 8bcv:2 (2.2) BS13 CLA N/A GO:0009765 ... N/A N/A
    772188 8bcv:3 (2.2) BS01 CLA N/A GO:0009765 ... N/A N/A
    772189 8bcv:3 (2.2) BS02 CLA N/A GO:0009765 ... N/A N/A
    772190 8bcv:3 (2.2) BS03 CHL N/A GO:0009765 ... N/A N/A
    772191 8bcv:3 (2.2) BS04 CLA N/A GO:0009765 ... N/A N/A
    772192 8bcv:3 (2.2) BS05 CLA N/A GO:0009765 ... N/A N/A
    772193 8bcv:3 (2.2) BS06 CLA N/A GO:0009765 ... N/A N/A
    772194 8bcv:3 (2.2) BS07 CHL N/A GO:0009765 ... N/A N/A
    772195 8bcv:3 (2.2) BS08 CLA N/A GO:0009765 ... N/A N/A
    772196 8bcv:3 (2.2) BS09 CLA N/A GO:0009765 ... N/A N/A
    772197 8bcv:3 (2.2) BS10 CLA N/A GO:0009765 ... N/A N/A
    772198 8bcv:3 (2.2) BS11 CLA N/A GO:0009765 ... N/A N/A
    772199 8bcv:3 (2.2) BS12 CLA N/A GO:0009765 ... N/A N/A
    772200 8bcv:3 (2.2) BS13 CLA N/A GO:0009765 ... N/A N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).