SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    772601 8apn:BF (3.1) BS03 rna N/A N/A N/A 36253367
    772602 8apn:Ba (3.1) BS01 peptide N/A N/A N/A 36253367
    772603 8apn:Ba (3.1) BS02 peptide N/A N/A N/A 36253367
    772604 8apn:Bc (3.1) BS01 rna N/A GO:0003735 ... N/A 36253367
    772605 8apn:Bd (3.1) BS01 rna N/A N/A N/A 36253367
    772606 8apn:Bd (3.1) BS02 rna N/A N/A N/A 36253367
    772607 8apn:Be (3.1) BS01 rna N/A GO:0003723 ... N/A 36253367
    772608 8apn:Be (3.1) BS02 rna N/A GO:0003723 ... N/A 36253367
    772609 8apn:Be (3.1) BS03 rna N/A GO:0003723 ... N/A 36253367
    772610 8apn:Be (3.1) BS04 rna N/A GO:0003723 ... N/A 36253367
    772611 8apn:Bf (3.1) BS01 rna N/A GO:0003735 ... N/A 36253367
    772612 8apn:Bg (3.1) BS01 rna N/A GO:0006412 ... N/A 36253367
    772613 8apn:Bh (3.1) BS01 rna N/A N/A N/A 36253367
    772614 8apn:Bh (3.1) BS02 rna N/A N/A N/A 36253367
    772615 8apn:Bh (3.1) BS03 rna N/A N/A N/A 36253367
    772616 8apn:Bi (3.1) BS01 rna N/A GO:0003735 ... N/A 36253367
    772617 8apn:Bi (3.1) BS02 rna N/A GO:0003735 ... N/A 36253367
    772618 8apn:Bi (3.1) BS03 rna N/A GO:0003735 ... N/A 36253367
    772619 8apn:Bj (3.1) BS01 rna N/A GO:0003735 ... N/A 36253367
    772620 8apn:Bj (3.1) BS02 rna N/A GO:0003735 ... N/A 36253367
    772621 8apn:Bk (3.1) BS01 rna N/A GO:0003735 ... N/A 36253367
    772622 8apn:Bk (3.1) BS02 rna N/A GO:0003735 ... N/A 36253367
    772623 8apn:Bl (3.1) BS01 rna N/A GO:0003735 ... N/A 36253367
    772624 8apn:Bl (3.1) BS02 rna N/A GO:0003735 ... N/A 36253367
    772625 8apn:Bl (3.1) BS03 rna N/A GO:0003735 ... N/A 36253367
    772626 8apn:Bm (3.1) BS01 rna N/A GO:0003676 ... N/A 36253367
    772627 8apn:Bm (3.1) BS02 rna N/A GO:0003676 ... N/A 36253367
    772628 8apn:Bm (3.1) BS03 MG N/A GO:0003676 ... N/A 36253367
    772629 8apn:Bn (3.1) BS01 rna N/A GO:0003735 ... N/A 36253367
    772630 8apn:Bn (3.1) BS02 rna N/A GO:0003735 ... N/A 36253367
    772631 8apn:Bo (3.1) BS01 rna N/A GO:0003735 ... N/A 36253367
    772632 8apn:Bp (3.1) BS01 rna N/A GO:0003735 ... N/A 36253367
    772633 8apn:Bp (3.1) BS02 rna N/A GO:0003735 ... N/A 36253367
    772634 8apn:Bq (3.1) BS01 rna N/A GO:0003735 ... N/A 36253367
    772635 8apn:Bq (3.1) BS02 rna N/A GO:0003735 ... N/A 36253367
    772636 8apn:Bq (3.1) BS03 rna N/A GO:0003735 ... N/A 36253367
    772637 8apn:Br (3.1) BS01 rna N/A GO:0003735 ... N/A 36253367
    772638 8apn:Br (3.1) BS02 peptide N/A GO:0003735 ... N/A 36253367
    772639 8apn:Bs (3.1) BS01 rna N/A GO:0003723 ... N/A 36253367
    772640 8apn:Bs (3.1) BS02 rna N/A GO:0003723 ... N/A 36253367
    772641 8apn:Bt (3.1) BS01 rna N/A GO:0003735 ... N/A 36253367
    772642 8apn:Bu (3.1) BS01 peptide N/A N/A N/A 36253367
    772643 8apn:Bv (3.1) BS01 rna N/A N/A N/A 36253367
    772644 8apn:Bv (3.1) BS02 rna N/A N/A N/A 36253367
    772645 8apn:Bw (3.1) BS01 rna N/A N/A N/A 36253367
    772646 8apn:Bw (3.1) BS02 MG N/A N/A N/A 36253367
    772647 8apn:Bw (3.1) BS03 ATP N/A N/A N/A 36253367
    772648 8apn:By (3.1) BS01 rna N/A N/A N/A 36253367
    772649 8apn:Bz (3.1) BS01 rna N/A GO:0003735 ... N/A 36253367
    772650 8apn:Bz (3.1) BS02 rna N/A GO:0003735 ... N/A 36253367
    772651 8apn:Xa (3.1) BS01 rna N/A N/A N/A 36253367
    772652 8apn:Xb (3.1) BS01 rna N/A N/A N/A 36253367
    772653 8apn:Xc (3.1) BS01 rna N/A N/A N/A 36253367
    772654 8apn:Xd (3.1) BS01 rna N/A N/A N/A 36253367
    772655 8apn:Xd (3.1) BS02 rna N/A N/A N/A 36253367
    772656 8apn:Xe (3.1) BS01 rna N/A N/A N/A 36253367
    772657 8apn:Xe (3.1) BS02 rna N/A N/A N/A 36253367
    772658 8apn:Xe (3.1) BS03 rna N/A N/A N/A 36253367
    772659 8apn:Xf (3.1) BS01 rna N/A N/A N/A 36253367
    772660 8apn:Xg (3.1) BS01 rna N/A N/A N/A 36253367
    772661 8apn:Xg (3.1) BS02 rna N/A N/A N/A 36253367
    772662 8apn:Ya (3.1) BS01 rna N/A N/A N/A 36253367
    772663 8apn:Ya (3.1) BS02 rna N/A N/A N/A 36253367
    772664 8apn:Yd (3.1) BS01 rna N/A N/A N/A 36253367
    772665 8apn:Ye (3.1) BS01 rna N/A N/A N/A 36253367
    772666 8apn:Yl (3.1) BS01 rna N/A N/A N/A 36253367
    772667 8apo:AA (3.2) BS01 rna N/A GO:0003735 ... N/A 36253367
    772668 8apo:AB (3.2) BS01 rna N/A GO:0003735 ... N/A 36253367
    772669 8apo:AB (3.2) BS02 rna N/A GO:0003735 ... N/A 36253367
    772670 8apo:AB (3.2) BS03 rna N/A GO:0003735 ... N/A 36253367
    772671 8apo:AC (3.2) BS01 rna N/A N/A N/A 36253367
    772672 8apo:AC (3.2) BS02 rna N/A N/A N/A 36253367
    772673 8apo:AC (3.2) BS03 rna N/A N/A N/A 36253367
    772674 8apo:AC (3.2) BS04 rna N/A N/A N/A 36253367
    772675 8apo:AD (3.2) BS01 rna N/A GO:0003735 ... N/A 36253367
    772676 8apo:AD (3.2) BS02 rna N/A GO:0003735 ... N/A 36253367
    772677 8apo:AD (3.2) BS03 ZN N/A GO:0003735 ... N/A 36253367
    772678 8apo:AE (3.2) BS01 rna N/A N/A N/A 36253367
    772679 8apo:AF (3.2) BS01 rna N/A GO:0003735 ... N/A 36253367
    772680 8apo:AF (3.2) BS02 rna N/A GO:0003735 ... N/A 36253367
    772681 8apo:AG (3.2) BS01 rna N/A GO:0003735 ... N/A 36253367
    772682 8apo:AI (3.2) BS01 rna N/A N/A N/A 36253367
    772683 8apo:AI (3.2) BS02 rna N/A N/A N/A 36253367
    772684 8apo:AI (3.2) BS03 rna N/A N/A N/A 36253367
    772685 8apo:AJ (3.2) BS01 rna N/A N/A N/A 36253367
    772686 8apo:AK (3.2) BS01 rna N/A N/A N/A 36253367
    772687 8apo:AK (3.2) BS02 rna N/A N/A N/A 36253367
    772688 8apo:AL (3.2) BS01 rna N/A N/A N/A 36253367
    772689 8apo:AM (3.2) BS01 rna N/A N/A N/A 36253367
    772690 8apo:AM (3.2) BS02 rna N/A N/A N/A 36253367
    772691 8apo:AM (3.2) BS03 rna N/A N/A N/A 36253367
    772692 8apo:AM (3.2) BS04 rna N/A N/A N/A 36253367
    772693 8apo:AN (3.2) BS01 rna N/A N/A N/A 36253367
    772694 8apo:AN (3.2) BS02 rna N/A N/A N/A 36253367
    772695 8apo:AO (3.2) BS01 rna N/A N/A N/A 36253367
    772696 8apo:Aa (3.2) BS01 rna N/A GO:0003723 ... N/A 36253367
    772697 8apo:Aa (3.2) BS02 rna N/A GO:0003723 ... N/A 36253367
    772698 8apo:Aa (3.2) BS03 rna N/A GO:0003723 ... N/A 36253367
    772699 8apo:Ab (3.2) BS01 rna N/A GO:0003735 ... N/A 36253367
    772700 8apo:Ab (3.2) BS02 rna N/A GO:0003735 ... N/A 36253367
    772701 8apo:Ab (3.2) BS03 rna N/A GO:0003735 ... N/A 36253367
    772702 8apo:Ac (3.2) BS01 rna N/A GO:0003735 ... N/A 36253367
    772703 8apo:Ac (3.2) BS02 rna N/A GO:0003735 ... N/A 36253367
    772704 8apo:Ac (3.2) BS03 rna N/A GO:0003735 ... N/A 36253367
    772705 8apo:Ac (3.2) BS04 rna N/A GO:0003735 ... N/A 36253367
    772706 8apo:Ac (3.2) BS05 rna N/A GO:0003735 ... N/A 36253367
    772707 8apo:Ad (3.2) BS01 rna N/A N/A N/A 36253367
    772708 8apo:Ae (3.2) BS01 rna N/A GO:0003735 ... N/A 36253367
    772709 8apo:Ah (3.2) BS01 rna N/A GO:0003735 ... N/A 36253367
    772710 8apo:Ah (3.2) BS02 rna N/A GO:0003735 ... N/A 36253367
    772711 8apo:Ah (3.2) BS03 rna N/A GO:0003735 ... N/A 36253367
    772712 8apo:Ah (3.2) BS04 rna N/A GO:0003735 ... N/A 36253367
    772713 8apo:Ai (3.2) BS01 rna N/A GO:0003735 ... N/A 36253367
    772714 8apo:Ai (3.2) BS02 rna N/A GO:0003735 ... N/A 36253367
    772715 8apo:Aj (3.2) BS01 rna N/A GO:0003735 ... N/A 36253367
    772716 8apo:Aj (3.2) BS02 rna N/A GO:0003735 ... N/A 36253367
    772717 8apo:Aj (3.2) BS03 rna N/A GO:0003735 ... N/A 36253367
    772718 8apo:Aj (3.2) BS04 rna N/A GO:0003735 ... N/A 36253367
    772719 8apo:Aj (3.2) BS05 rna N/A GO:0003735 ... N/A 36253367
    772720 8apo:Ak (3.2) BS01 rna N/A GO:0003735 ... N/A 36253367
    772721 8apo:Ak (3.2) BS02 rna N/A GO:0003735 ... N/A 36253367
    772722 8apo:Ak (3.2) BS03 rna N/A GO:0003735 ... N/A 36253367
    772723 8apo:Ak (3.2) BS04 rna N/A GO:0003735 ... N/A 36253367
    772724 8apo:Ak (3.2) BS05 rna N/A GO:0003735 ... N/A 36253367
    772725 8apo:Ak (3.2) BS06 rna N/A GO:0003735 ... N/A 36253367
    772726 8apo:Al (3.2) BS01 rna N/A GO:0003735 ... N/A 36253367
    772727 8apo:Al (3.2) BS02 rna N/A GO:0003735 ... N/A 36253367
    772728 8apo:Al (3.2) BS03 rna N/A GO:0003735 ... N/A 36253367
    772729 8apo:Am (3.2) BS01 rna N/A N/A N/A 36253367
    772730 8apo:Am (3.2) BS02 rna N/A N/A N/A 36253367
    772731 8apo:An (3.2) BS01 rna N/A GO:0003735 ... N/A 36253367
    772732 8apo:An (3.2) BS02 rna N/A GO:0003735 ... N/A 36253367
    772733 8apo:Ao (3.2) BS01 rna N/A GO:0003735 ... N/A 36253367
    772734 8apo:Ao (3.2) BS02 rna N/A GO:0003735 ... N/A 36253367
    772735 8apo:Ao (3.2) BS03 rna N/A GO:0003735 ... N/A 36253367
    772736 8apo:Ao (3.2) BS04 rna N/A GO:0003735 ... N/A 36253367
    772737 8apo:Ap (3.2) BS01 rna N/A GO:0003723 ... N/A 36253367
    772738 8apo:Ap (3.2) BS02 rna N/A GO:0003723 ... N/A 36253367
    772739 8apo:Ap (3.2) BS03 rna N/A GO:0003723 ... N/A 36253367
    772740 8apo:Ap (3.2) BS04 rna N/A GO:0003723 ... N/A 36253367
    772741 8apo:Ap (3.2) BS05 rna N/A GO:0003723 ... N/A 36253367
    772742 8apo:Ap (3.2) BS06 rna N/A GO:0003723 ... N/A 36253367
    772743 8apo:Aq (3.2) BS01 rna N/A GO:0003735 ... N/A 36253367
    772744 8apo:Aq (3.2) BS02 rna N/A GO:0003735 ... N/A 36253367
    772745 8apo:Aq (3.2) BS03 rna N/A GO:0003735 ... N/A 36253367
    772746 8apo:Aq (3.2) BS04 rna N/A GO:0003735 ... N/A 36253367
    772747 8apo:Aq (3.2) BS05 rna N/A GO:0003735 ... N/A 36253367
    772748 8apo:Aq (3.2) BS06 peptide N/A GO:0003735 ... N/A 36253367
    772749 8apo:Ar (3.2) BS01 rna N/A GO:0003735 ... N/A 36253367
    772750 8apo:Ar (3.2) BS02 rna N/A GO:0003735 ... N/A 36253367
    772751 8apo:Ar (3.2) BS03 peptide N/A GO:0003735 ... N/A 36253367
    772752 8apo:At (3.2) BS01 rna N/A GO:0003735 ... N/A 36253367
    772753 8apo:Au (3.2) BS01 rna N/A GO:0003735 ... N/A 36253367
    772754 8apo:Au (3.2) BS02 rna N/A GO:0003735 ... N/A 36253367
    772755 8apo:Av (3.2) BS01 rna N/A GO:0003735 ... N/A 36253367
    772756 8apo:Ax (3.2) BS01 rna N/A GO:0003735 ... N/A 36253367
    772757 8apo:Ax (3.2) BS02 rna N/A GO:0003735 ... N/A 36253367
    772758 8apo:Ax (3.2) BS03 rna N/A GO:0003735 ... N/A 36253367
    772759 8apo:Az (3.2) BS01 rna N/A GO:0003735 ... N/A 36253367
    772760 8apo:Az (3.2) BS02 rna N/A GO:0003735 ... N/A 36253367
    772761 8apo:Az (3.2) BS03 rna N/A GO:0003735 ... N/A 36253367
    772762 8apo:Az (3.2) BS04 rna N/A GO:0003735 ... N/A 36253367
    772763 8apo:BB (3.2) BS01 rna N/A N/A N/A 36253367
    772764 8apo:BB (3.2) BS02 rna N/A N/A N/A 36253367
    772765 8apo:BC (3.2) BS01 rna N/A N/A N/A 36253367
    772766 8apo:BC (3.2) BS02 rna N/A N/A N/A 36253367
    772767 8apo:BD (3.2) BS01 rna N/A N/A N/A 36253367
    772768 8apo:BE (3.2) BS01 rna N/A N/A N/A 36253367
    772769 8apo:BF (3.2) BS01 rna N/A N/A N/A 36253367
    772770 8apo:BF (3.2) BS02 rna N/A N/A N/A 36253367
    772771 8apo:BF (3.2) BS03 rna N/A N/A N/A 36253367
    772772 8apo:Ba (3.2) BS01 peptide N/A N/A N/A 36253367
    772773 8apo:Ba (3.2) BS02 peptide N/A N/A N/A 36253367
    772774 8apo:Bb (3.2) BS01 peptide N/A GO:0003735 ... N/A 36253367
    772775 8apo:Bc (3.2) BS01 rna N/A GO:0003735 ... N/A 36253367
    772776 8apo:Bd (3.2) BS01 rna N/A N/A N/A 36253367
    772777 8apo:Bd (3.2) BS02 rna N/A N/A N/A 36253367
    772778 8apo:Be (3.2) BS01 rna N/A GO:0003723 ... N/A 36253367
    772779 8apo:Be (3.2) BS02 rna N/A GO:0003723 ... N/A 36253367
    772780 8apo:Be (3.2) BS03 rna N/A GO:0003723 ... N/A 36253367
    772781 8apo:Be (3.2) BS04 rna N/A GO:0003723 ... N/A 36253367
    772782 8apo:Bf (3.2) BS01 rna N/A GO:0003735 ... N/A 36253367
    772783 8apo:Bg (3.2) BS01 rna N/A GO:0006412 ... N/A 36253367
    772784 8apo:Bh (3.2) BS01 rna N/A N/A N/A 36253367
    772785 8apo:Bh (3.2) BS02 rna N/A N/A N/A 36253367
    772786 8apo:Bh (3.2) BS03 rna N/A N/A N/A 36253367
    772787 8apo:Bi (3.2) BS01 rna N/A GO:0003735 ... N/A 36253367
    772788 8apo:Bi (3.2) BS02 rna N/A GO:0003735 ... N/A 36253367
    772789 8apo:Bi (3.2) BS03 rna N/A GO:0003735 ... N/A 36253367
    772790 8apo:Bj (3.2) BS01 rna N/A GO:0003735 ... N/A 36253367
    772791 8apo:Bj (3.2) BS02 rna N/A GO:0003735 ... N/A 36253367
    772792 8apo:Bk (3.2) BS01 rna N/A GO:0003735 ... N/A 36253367
    772793 8apo:Bk (3.2) BS02 rna N/A GO:0003735 ... N/A 36253367
    772794 8apo:Bl (3.2) BS01 rna N/A GO:0003735 ... N/A 36253367
    772795 8apo:Bl (3.2) BS02 rna N/A GO:0003735 ... N/A 36253367
    772796 8apo:Bl (3.2) BS03 rna N/A GO:0003735 ... N/A 36253367
    772797 8apo:Bm (3.2) BS01 rna N/A GO:0003676 ... N/A 36253367
    772798 8apo:Bm (3.2) BS02 rna N/A GO:0003676 ... N/A 36253367
    772799 8apo:Bm (3.2) BS03 MG N/A GO:0003676 ... N/A 36253367
    772800 8apo:Bn (3.2) BS01 rna N/A GO:0003735 ... N/A 36253367

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).