SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    773601 8atw:A (3.62) BS03 rna 2.7.7.6 GO:0001018 ... P13433 37821701
    773602 8atw:B (3.62) BS01 dna 2.1.1.- GO:0005739 ... P14908 37821701
    773603 8atw:B (3.62) BS02 dna 2.1.1.- GO:0005739 ... P14908 37821701
    773604 8atx:A (7.0) BS01 ZN 2.3.2.27 GO:0000922 ... Q9NR09 36758105
    773605 8atx:B (7.0) BS01 ZN 2.3.2.27 GO:0000922 ... Q9NR09 36758105
    773606 8aty:A (1.9) BS01 O7O ? GO:0003677 ... P37231 37385602
    773607 8aty:A (1.9) BS02 O7O ? GO:0003677 ... P37231 37385602
    773608 8atz:A (1.95) BS01 O86 ? GO:0003677 ... P37231 37385602
    773609 8au2:A (1.6) BS01 peptide ? GO:0001836 ... P31947 37676236
    773610 8au2:A (1.6) BS02 O3O ? GO:0001836 ... P31947 37676236
    773611 8au3:A (2.26) BS01 3E8 2.7.10.1 GO:0004672 ... P08581 37806493
    773612 8au3:B (2.26) BS01 3E8 2.7.10.1 GO:0004672 ... P08581 37806493
    773613 8au5:A (2.72) BS01 3E8 2.7.10.1 GO:0004672 ... P08581 37806493
    773614 8au6:A (2.0) BS01 CA ? GO:0016020 ... Q8NQL8 36469781
    773615 8au8:A (1.58) BS01 FMN ? GO:0003959 ... Q9R9V9 36846821
    773616 8au8:A (1.58) BS02 O8I ? GO:0003959 ... Q9R9V9 36846821
    773617 8au8:A (1.58) BS03 O8I ? GO:0003959 ... Q9R9V9 36846821
    773618 8au8:B (1.58) BS01 FMN ? GO:0003959 ... Q9R9V9 36846821
    773619 8au8:B (1.58) BS02 O8I ? GO:0003959 ... Q9R9V9 36846821
    773620 8au9:A (1.5) BS01 FMN ? GO:0003959 ... Q9R9V9 36846821
    773621 8au9:A (1.5) BS02 O8R ? GO:0003959 ... Q9R9V9 36846821
    773622 8au9:B (1.5) BS01 FMN ? GO:0003959 ... Q9R9V9 36846821
    773623 8au9:B (1.5) BS02 O8R ? GO:0003959 ... Q9R9V9 36846821
    773624 8aua:A (1.9) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773625 8aua:A (1.9) BS02 L9I 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773626 8aua:B (1.9) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773627 8aua:B (1.9) BS02 L9I 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773628 8aub:A (1.62) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773629 8aub:A (1.62) BS02 O8I 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773630 8aub:B (1.62) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773631 8aub:B (1.62) BS02 O8I 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773632 8aue:A (1.82) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773633 8aue:A (1.82) BS02 O8R 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773634 8aue:A (1.82) BS03 GLY 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773635 8aue:B (1.82) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773636 8aue:B (1.82) BS02 O8R 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773637 8aue:B (1.82) BS03 GLY 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773638 8auf:A (1.35) BS01 O8I ? GO:0003959 ... Q9R9V9 36846821
    773639 8auf:A (1.35) BS02 FMN ? GO:0003959 ... Q9R9V9 36846821
    773640 8auf:A (1.35) BS03 O8I ? GO:0003959 ... Q9R9V9 36846821
    773641 8auf:B (1.35) BS01 FMN ? GO:0003959 ... Q9R9V9 36846821
    773642 8auf:B (1.35) BS02 O8I ? GO:0003959 ... Q9R9V9 36846821
    773643 8aug:A (1.35) BS01 L9I ? GO:0003959 ... Q9R9V9 36846821
    773644 8aug:A (1.35) BS02 FMN ? GO:0003959 ... Q9R9V9 36846821
    773645 8aug:A (1.35) BS03 L9I ? GO:0003959 ... Q9R9V9 36846821
    773646 8aug:A (1.35) BS04 L9I ? GO:0003959 ... Q9R9V9 36846821
    773647 8aug:A (1.35) BS05 L9I ? GO:0003959 ... Q9R9V9 36846821
    773648 8aug:B (1.35) BS01 L9I ? GO:0003959 ... Q9R9V9 36846821
    773649 8aug:B (1.35) BS02 L9I ? GO:0003959 ... Q9R9V9 36846821
    773650 8aug:B (1.35) BS03 FMN ? GO:0003959 ... Q9R9V9 36846821
    773651 8aug:B (1.35) BS04 L9I ? GO:0003959 ... Q9R9V9 36846821
    773652 8aug:B (1.35) BS05 L9I ? GO:0003959 ... Q9R9V9 36846821
    773653 8aug:B (1.35) BS06 L9I ? GO:0003959 ... Q9R9V9 36846821
    773654 8auh:A (1.35) BS01 FMN ? GO:0003959 ... Q9R9V9 36846821
    773655 8auh:A (1.35) BS02 L9I ? GO:0003959 ... Q9R9V9 36846821
    773656 8auh:B (1.35) BS01 FMN ? GO:0003959 ... Q9R9V9 36846821
    773657 8auh:B (1.35) BS02 L9I ? GO:0003959 ... Q9R9V9 36846821
    773658 8aui:A (1.54) BS01 FMN ? GO:0003959 ... Q9R9V9 36846821
    773659 8aui:A (1.54) BS02 O8R ? GO:0003959 ... Q9R9V9 36846821
    773660 8aui:A (1.54) BS03 O8R ? GO:0003959 ... Q9R9V9 36846821
    773661 8aui:A (1.54) BS04 O8R ? GO:0003959 ... Q9R9V9 36846821
    773662 8aui:A (1.54) BS05 O8R ? GO:0003959 ... Q9R9V9 36846821
    773663 8aui:B (1.54) BS01 O8R ? GO:0003959 ... Q9R9V9 36846821
    773664 8aui:B (1.54) BS02 O8R ? GO:0003959 ... Q9R9V9 36846821
    773665 8aui:B (1.54) BS03 FMN ? GO:0003959 ... Q9R9V9 36846821
    773666 8aui:B (1.54) BS04 O8R ? GO:0003959 ... Q9R9V9 36846821
    773667 8aui:B (1.54) BS05 O8R ? GO:0003959 ... Q9R9V9 36846821
    773668 8auj:A (1.57) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773669 8auj:A (1.57) BS02 L9I 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773670 8auj:B (1.57) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773671 8auj:B (1.57) BS02 L9I 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773672 8auk:A (6.2) BS01 ZN 2.3.2.27 GO:0000922 ... Q9NR09 36758105
    773673 8auk:B (6.2) BS01 ZN 2.3.2.27 GO:0000922 ... Q9NR09 36758105
    773674 8aul:A (1.5) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773675 8aul:A (1.5) BS02 O8R 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773676 8aul:B (1.5) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773677 8aul:B (1.5) BS02 O8R 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773678 8aum:A (1.35) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773679 8aum:A (1.35) BS02 O8I 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773680 8aum:B (1.35) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773681 8aum:B (1.35) BS02 O8I 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773682 8aun:A (1.49) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773683 8aun:A (1.49) BS02 L9I 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773684 8aun:B (1.49) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773685 8aun:B (1.49) BS02 L9I 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773686 8auo:A (1.58) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773687 8auo:A (1.58) BS02 O8R 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773688 8auo:B (1.58) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773689 8auo:B (1.58) BS02 O8R 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773690 8aup:A (2.17) BS01 MN 3.5.3.1 GO:0000050 ... P05089 36939275
    773691 8aup:A (2.17) BS02 MN 3.5.3.1 GO:0000050 ... P05089 36939275
    773692 8aup:A (2.17) BS03 O93 3.5.3.1 GO:0000050 ... P05089 36939275
    773693 8aup:B (2.17) BS01 MN 3.5.3.1 GO:0000050 ... P05089 36939275
    773694 8aup:B (2.17) BS02 MN 3.5.3.1 GO:0000050 ... P05089 36939275
    773695 8aup:B (2.17) BS03 O93 3.5.3.1 GO:0000050 ... P05089 36939275
    773696 8aup:C (2.17) BS01 MN 3.5.3.1 GO:0000050 ... P05089 36939275
    773697 8aup:C (2.17) BS02 MN 3.5.3.1 GO:0000050 ... P05089 36939275
    773698 8aup:C (2.17) BS03 O93 3.5.3.1 GO:0000050 ... P05089 36939275
    773699 8aup:D (2.17) BS01 MN 3.5.3.1 GO:0000050 ... P05089 36939275
    773700 8aup:D (2.17) BS02 MN 3.5.3.1 GO:0000050 ... P05089 36939275
    773701 8aup:D (2.17) BS03 O93 3.5.3.1 GO:0000050 ... P05089 36939275
    773702 8aup:E (2.17) BS01 MN 3.5.3.1 GO:0000050 ... P05089 36939275
    773703 8aup:E (2.17) BS02 MN 3.5.3.1 GO:0000050 ... P05089 36939275
    773704 8aup:E (2.17) BS03 O93 3.5.3.1 GO:0000050 ... P05089 36939275
    773705 8aup:F (2.17) BS01 MN 3.5.3.1 GO:0000050 ... P05089 36939275
    773706 8aup:F (2.17) BS02 MN 3.5.3.1 GO:0000050 ... P05089 36939275
    773707 8aup:F (2.17) BS03 O93 3.5.3.1 GO:0000050 ... P05089 36939275
    773708 8auq:A (1.42) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773709 8auq:A (1.42) BS02 O8I 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773710 8auq:B (1.42) BS01 FMN 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773711 8auq:B (1.42) BS02 O8I 1.3.1.42 GO:0005777 ... Q9FEW9 36846821
    773712 8aus:A (1.4) BS01 peptide ? GO:0001836 ... P31947 37676236
    773713 8aus:A (1.4) BS02 O3F ? GO:0001836 ... P31947 37676236
    773714 8aut:A (2.685) BS01 ZN ? N/A A0A075X7C6 N/A
    773715 8aut:A (2.685) BS02 AKG ? N/A A0A075X7C6 N/A
    773716 8aut:A (2.685) BS03 OAU ? N/A A0A075X7C6 N/A
    773717 8aut:B (2.685) BS01 ZN ? N/A A0A075X7C6 N/A
    773718 8aut:B (2.685) BS02 AKG ? N/A A0A075X7C6 N/A
    773719 8aut:B (2.685) BS03 OAU ? N/A A0A075X7C6 N/A
    773720 8aut:C (2.685) BS01 ZN ? N/A A0A075X7C6 N/A
    773721 8aut:C (2.685) BS02 AKG ? N/A A0A075X7C6 N/A
    773722 8aut:C (2.685) BS03 OAU ? N/A A0A075X7C6 N/A
    773723 8aut:D (2.685) BS01 ZN ? N/A A0A075X7C6 N/A
    773724 8aut:D (2.685) BS02 AKG ? N/A A0A075X7C6 N/A
    773725 8aut:D (2.685) BS03 OAU ? N/A A0A075X7C6 N/A
    773726 8auu:A (0.95) BS01 NAP 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 N/A
    773727 8auu:A (0.95) BS02 30L 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 N/A
    773728 8auv:A (2.38) BS01 rna ? GO:0003723 ... A0A1S4DQ51 37156858
    773729 8auv:C (2.38) BS01 rna ? GO:0003735 ... A0A1S4B129 37156858
    773730 8auv:D (2.38) BS01 rna ? GO:0003729 ... A0A1S3Z9G2 37156858
    773731 8auv:E (2.38) BS01 rna ? GO:0000028 ... A0A1S3Y949 37156858
    773732 8auv:F (2.38) BS01 rna ? GO:0003735 ... Q285L8 37156858
    773733 8auv:G (2.38) BS01 rna ? GO:0000447 ... A0A1S4A3T4 37156858
    773734 8auv:H (2.38) BS01 rna ? GO:0002181 ... A0A1S3ZXI6 37156858
    773735 8auv:I (2.38) BS01 rna ? GO:0003735 ... A0A076L2E2 37156858
    773736 8auv:J (2.38) BS01 rna ? GO:0003729 ... A0A1S4CWI7 37156858
    773737 8auv:J (2.38) BS02 ZN ? GO:0003729 ... A0A1S4CWI7 37156858
    773738 8auv:K (2.38) BS01 rna ? GO:0003735 ... A0A1S3XJK0 37156858
    773739 8auv:L (2.38) BS01 rna ? GO:0000028 ... A0A1S4AS05 37156858
    773740 8auv:M (2.38) BS01 rna ? GO:0003735 ... A0A1S3XGJ0 37156858
    773741 8auv:N (2.38) BS01 rna ? GO:0003729 ... A0A1S4C0C1 37156858
    773742 8auv:N (2.38) BS02 ZN ? GO:0003729 ... A0A1S4C0C1 37156858
    773743 8auv:O (2.38) BS01 rna ? GO:0003735 ... A0A1S3Z906 37156858
    773744 8auv:P (2.38) BS01 rna ? GO:0002181 ... A0A1S4CZK3 37156858
    773745 8auv:Q (2.38) BS01 rna ? GO:0000165 ... A0A1S4ABX7 37156858
    773746 8auv:R (2.38) BS01 rna ? GO:0003723 ... A0A1S3XHL0 37156858
    773747 8auv:S (2.38) BS01 rna ? GO:0000028 ... A0A1S3XAN1 37156858
    773748 8auv:T (2.38) BS01 rna ? GO:0003735 ... A0A1S4C879 37156858
    773749 8auv:T (2.38) BS02 rna ? GO:0003735 ... A0A1S4C879 37156858
    773750 8auv:U (2.38) BS01 rna ? GO:0003676 ... A0A1S3YM01 37156858
    773751 8auv:U (2.38) BS02 MG ? GO:0003676 ... A0A1S3YM01 37156858
    773752 8auv:V (2.38) BS01 rna ? GO:0002181 ... A0A1S4DPT4 37156858
    773753 8auv:V (2.38) BS02 ZN ? GO:0002181 ... A0A1S4DPT4 37156858
    773754 8auv:W (2.38) BS01 rna ? GO:0000462 ... A0A1S3ZRI7 37156858
    773755 8auv:X (2.38) BS01 rna ? GO:0003729 ... A0A1S4BW10 37156858
    773756 8auv:Y (2.38) BS01 rna ? GO:0000028 ... A0A1S4DFI4 37156858
    773757 8auv:Z (2.38) BS01 rna ? GO:0000028 ... A0A1S3Y4M0 37156858
    773758 8auv:a (2.38) BS01 rna ? GO:0003723 ... A0A1S4BXU2 37156858
    773759 8auv:b (2.38) BS01 rna ? GO:0003723 ... A0A1S4B907 37156858
    773760 8auv:c (2.38) BS01 rna ? GO:0003723 ... A0A1S3XAX8 37156858
    773761 8auv:d (2.38) BS01 rna ? GO:0003723 ... A0A1S4BXT5 37156858
    773762 8auv:e (2.38) BS01 rna ? GO:0003735 ... A0A1S4DBQ8 37156858
    773763 8auv:f (2.38) BS01 rna ? GO:0000462 ... A0A1S4AU23 37156858
    773764 8auv:k (2.38) BS01 rna ? GO:0003735 ... A0A1S3Z3Y7 37156858
    773765 8auv:l (2.38) BS01 rna ? GO:0003723 ... A0A1S4DHU6 37156858
    773766 8auw:A (7.2) BS01 ZN 2.3.2.27 GO:0000922 ... Q9NR09 36758105
    773767 8auw:B (7.2) BS01 ZN 2.3.2.27 GO:0000922 ... Q9NR09 36758105
    773768 8auy:A (1.5) BS01 peptide ? GO:0001836 ... P31947 37676236
    773769 8auy:A (1.5) BS02 O2X ? GO:0001836 ... P31947 37676236
    773770 8auz:A (2.66) BS01 O9C 2.7.11.1
    2.7.11.26
    GO:0004672 ... P49841 36913879
    773771 8auz:B (2.66) BS01 O9C 2.7.11.1
    2.7.11.26
    GO:0004672 ... P49841 36913879
    773772 8av0:A (1.5) BS01 peptide ? GO:0001836 ... P31947 37252362
    773773 8av0:A (1.5) BS02 O6C ? GO:0001836 ... P31947 37252362
    773774 8av1:A (2.15) BS01 O9L 2.7.11.1
    2.7.11.26
    GO:0004672 ... P49841 36913879
    773775 8av1:B (2.15) BS01 O9L 2.7.11.1
    2.7.11.26
    GO:0004672 ... P49841 36913879
    773776 8av3:A (1.8) BS01 peptide ? GO:0001836 ... P31947 37676236
    773777 8av3:A (1.8) BS02 O3T ? GO:0001836 ... P31947 37676236
    773778 8av4:A (1.6) BS01 peptide ? GO:0001836 ... P31947 37676236
    773779 8av4:A (1.6) BS02 O49 ? GO:0001836 ... P31947 37676236
    773780 8av5:A (1.62) BS01 MG 1.11.2.1 GO:0004601 ... B9W4V6 N/A
    773781 8av5:A (1.62) BS02 HEM 1.11.2.1 GO:0004601 ... B9W4V6 N/A
    773782 8av6:A (4.68) BS01 ADP 3.6.4.12 GO:0000812 ... G0RYI5 36490333
    773783 8av6:B (4.68) BS01 ADP 3.6.4.12 GO:0000812 ... G0RYI5 36490333
    773784 8av6:C (4.68) BS01 ADP 3.6.4.12 GO:0000812 ... G0RYI5 36490333
    773785 8av6:D (4.68) BS01 ADP 3.6.4.12 GO:0000812 ... G0RYC2 36490333
    773786 8av6:E (4.68) BS01 ADP 3.6.4.12 GO:0000812 ... G0RYC2 36490333
    773787 8av6:E (4.68) BS02 ADP 3.6.4.12 GO:0000812 ... G0RYC2 36490333
    773788 8av6:F (4.68) BS01 ADP 3.6.4.12 GO:0000812 ... G0RYC2 36490333
    773789 8av6:G (4.68) BS01 dna N/A GO:0003677 ... N/A 36490333
    773790 8av6:G (4.68) BS02 dna N/A GO:0003677 ... N/A 36490333
    773791 8av6:I (4.68) BS01 dna ? GO:0005634 ... G0S590 36490333
    773792 8av6:J (4.68) BS01 dna ? N/A G0S589 36490333
    773793 8av6:J (4.68) BS02 ATP ? N/A G0S589 36490333
    773794 8av6:M (4.68) BS01 dna ? GO:0000786 ... Q71DI3 36490333
    773795 8av6:M (4.68) BS02 dna ? GO:0000786 ... Q71DI3 36490333
    773796 8av6:N (4.68) BS01 dna ? GO:0000781 ... P62805 36490333
    773797 8av6:N (4.68) BS02 dna ? GO:0000781 ... P62805 36490333
    773798 8av6:O (4.68) BS01 dna ? GO:0000786 ... P0C0S8 36490333
    773799 8av6:O (4.68) BS02 dna ? GO:0000786 ... P0C0S8 36490333
    773800 8av6:P (4.68) BS01 dna ? GO:0000786 ... P62807 36490333

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).