SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 3862 3863 3864 3865 3866 3867 3868 3869 3870 3871 3872 3873 3874 3875 3876 3877 3878 3879 3880 3881 3882 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    774201 8bhp:d (2.37) BS01 rna ? GO:0002181 ... P0A7Q1 37553384
    774202 8bhp:e (2.37) BS01 rna ? GO:0002181 ... P0A7Q6 37553384
    774203 8bhp:f (2.37) BS01 rna ? GO:0000028 ... P0A7V0 37553384
    774204 8bhp:g (2.37) BS01 rna ? GO:0000028 ... P0A7V3 37553384
    774205 8bhp:h (2.37) BS01 rna ? GO:0000028 ... P0A7V8 37553384
    774206 8bhp:i (2.37) BS01 rna ? GO:0000028 ... P0A7W1 37553384
    774207 8bhp:j (2.37) BS01 rna ? GO:0002181 ... P02358 37553384
    774208 8bhp:k (2.37) BS01 rna ? GO:0000028 ... P02359 37553384
    774209 8bhp:l (2.37) BS01 rna ? GO:0000028 ... P0A7W7 37553384
    774210 8bhp:m (2.37) BS01 rna ? GO:0000049 ... P0A7X3 37553384
    774211 8bhp:n (2.37) BS01 rna ? GO:0000049 ... P0A7R5 37553384
    774212 8bhp:o (2.37) BS01 rna ? GO:0002181 ... P0A7R9 37553384
    774213 8bhp:p (2.37) BS01 rna ? GO:0000049 ... P0A7S3 37553384
    774214 8bhp:q (2.37) BS01 rna ? GO:0000049 ... P0A7S9 37553384
    774215 8bhp:r (2.37) BS01 rna ? GO:0000028 ... P0AG59 37553384
    774216 8bhp:s (2.37) BS01 rna ? GO:0000028 ... P0ADZ4 37553384
    774217 8bhp:s (2.37) BS02 rna ? GO:0000028 ... P0ADZ4 37553384
    774218 8bhp:t (2.37) BS01 rna ? GO:0000028 ... P0A7T3 37553384
    774219 8bhp:u (2.37) BS01 rna ? GO:0000028 ... P0AG63 37553384
    774220 8bhp:v (2.37) BS01 rna ? GO:0002181 ... P0A7T7 37553384
    774221 8bhp:w (2.37) BS01 rna ? GO:0000028 ... P0A7U3 37553384
    774222 8bhp:x (2.37) BS01 rna ? GO:0000028 ... P0A7U7 37553384
    774223 8bhp:y (2.37) BS01 rna ? GO:0000028 ... P68679 37553384
    774224 8bhq:A (3.3) BS01 QR3 ? GO:0004888 ... P31644 37903907
    774225 8bhq:A (3.3) BS02 QR3 ? GO:0004888 ... P31644 37903907
    774226 8bhq:B (3.3) BS01 QR3 ? GO:0004888 ... P31644 37903907
    774227 8bhq:B (3.3) BS02 QR3 ? GO:0004888 ... P31644 37903907
    774228 8bhq:C (3.3) BS01 QR3 ? GO:0004888 ... P31644 37903907
    774229 8bhq:C (3.3) BS02 QR3 ? GO:0004888 ... P31644 37903907
    774230 8bhq:D (3.3) BS01 QR3 ? GO:0004888 ... P31644 37903907
    774231 8bhq:D (3.3) BS02 QR3 ? GO:0004888 ... P31644 37903907
    774232 8bhq:E (3.3) BS01 QR3 ? GO:0004888 ... P31644 37903907
    774233 8bhq:E (3.3) BS02 QR3 ? GO:0004888 ... P31644 37903907
    774234 8bhr:A (3.38) BS01 QM7 ? GO:0004888 ... P31644 37903907
    774235 8bhr:A (3.38) BS02 QM7 ? GO:0004888 ... P31644 37903907
    774236 8bhr:B (3.38) BS01 QM7 ? GO:0004888 ... P31644 37903907
    774237 8bhr:B (3.38) BS02 QM7 ? GO:0004888 ... P31644 37903907
    774238 8bhr:C (3.38) BS01 QM7 ? GO:0004888 ... P31644 37903907
    774239 8bhr:C (3.38) BS02 QM7 ? GO:0004888 ... P31644 37903907
    774240 8bhr:D (3.38) BS01 QM7 ? GO:0004888 ... P31644 37903907
    774241 8bhr:E (3.38) BS01 QM7 ? GO:0004888 ... P31644 37903907
    774242 8bhr:E (3.38) BS02 QM7 ? GO:0004888 ... P31644 37903907
    774243 8bhs:A (3.24) BS01 QK9 ? GO:0004888 ... P31644 37903907
    774244 8bhs:A (3.24) BS02 QK9 ? GO:0004888 ... P31644 37903907
    774245 8bhs:B (3.24) BS01 QK9 ? GO:0004888 ... P31644 37903907
    774246 8bhs:B (3.24) BS02 QK9 ? GO:0004888 ... P31644 37903907
    774247 8bhs:C (3.24) BS01 QK9 ? GO:0004888 ... P31644 37903907
    774248 8bhs:C (3.24) BS02 QK9 ? GO:0004888 ... P31644 37903907
    774249 8bhs:D (3.24) BS01 QK9 ? GO:0004888 ... P31644 37903907
    774250 8bhs:D (3.24) BS02 QK9 ? GO:0004888 ... P31644 37903907
    774251 8bhs:E (3.24) BS01 QK9 ? GO:0004888 ... P31644 37903907
    774252 8bhs:E (3.24) BS02 QK9 ? GO:0004888 ... P31644 37903907
    774253 8bht:A (3.1) BS01 ATP 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    774254 8bht:A (3.1) BS02 CLR 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    774255 8bht:A (3.1) BS03 R1H 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    774256 8bht:B (3.1) BS01 ATP 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    774257 8bht:B (3.1) BS02 CLR 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    774258 8bht:B (3.1) BS03 R1H 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    774259 8bhv:A (4.51) BS01 dna 2.7.11.1 GO:0000460 ... P78527 37256950
    774260 8bhv:A (4.51) BS02 dna 2.7.11.1 GO:0000460 ... P78527 37256950
    774261 8bhv:F (4.51) BS01 dna 2.7.11.1 GO:0000460 ... P78527 37256950
    774262 8bhv:F (4.51) BS02 dna 2.7.11.1 GO:0000460 ... P78527 37256950
    774263 8bhv:a (4.51) BS01 peptide 3.6.4.-
    4.2.99.-
    GO:0000723 ... P12956 37256950
    774264 8bhv:a (4.51) BS02 dna 3.6.4.-
    4.2.99.-
    GO:0000723 ... P12956 37256950
    774265 8bhv:a (4.51) BS03 dna 3.6.4.-
    4.2.99.-
    GO:0000723 ... P12956 37256950
    774266 8bhv:b (4.51) BS01 dna 3.6.4.- GO:0000723 ... P13010 37256950
    774267 8bhv:b (4.51) BS02 dna 3.6.4.- GO:0000723 ... P13010 37256950
    774268 8bhv:h (4.51) BS01 peptide 3.6.4.-
    4.2.99.-
    GO:0000723 ... P12956 37256950
    774269 8bhv:h (4.51) BS02 dna 3.6.4.-
    4.2.99.-
    GO:0000723 ... P12956 37256950
    774270 8bhv:j (4.51) BS01 dna 3.6.4.- GO:0000723 ... P13010 37256950
    774271 8bhv:j (4.51) BS02 dna 3.6.4.- GO:0000723 ... P13010 37256950
    774272 8bhx:A (1.25) BS01 FE 1.15.1.1 GO:0004784 ... Q47RC2 37725277
    774273 8bhx:B (1.25) BS01 FE 1.15.1.1 GO:0004784 ... Q47RC2 37725277
    774274 8bhy:A (5.33) BS01 dna 2.7.11.1 GO:0000460 ... P78527 37256950
    774275 8bhy:B (5.33) BS01 dna 3.6.4.-
    4.2.99.-
    GO:0000723 ... P12956 37256950
    774276 8bhy:B (5.33) BS02 dna 3.6.4.-
    4.2.99.-
    GO:0000723 ... P12956 37256950
    774277 8bhy:C (5.33) BS01 dna 3.6.4.- GO:0000723 ... P13010 37256950
    774278 8bhy:C (5.33) BS02 dna 3.6.4.- GO:0000723 ... P13010 37256950
    774279 8bhy:C (5.33) BS03 peptide 3.6.4.- GO:0000723 ... P13010 37256950
    774280 8bhy:L (5.33) BS01 dna 3.6.4.- GO:0000723 ... P13010 37256950
    774281 8bhy:L (5.33) BS02 dna 3.6.4.- GO:0000723 ... P13010 37256950
    774282 8bhy:L (5.33) BS03 peptide 3.6.4.- GO:0000723 ... P13010 37256950
    774283 8bhy:S (5.33) BS01 dna 2.7.11.1 GO:0000460 ... P78527 37256950
    774284 8bhy:S (5.33) BS02 dna 2.7.11.1 GO:0000460 ... P78527 37256950
    774285 8bhy:T (5.33) BS01 dna 3.6.4.-
    4.2.99.-
    GO:0000723 ... P12956 37256950
    774286 8bhy:T (5.33) BS02 dna 3.6.4.-
    4.2.99.-
    GO:0000723 ... P12956 37256950
    774287 8bi0:A (3.2) BS01 ATP 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    774288 8bi0:A (3.2) BS02 CLR 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    774289 8bi0:A (3.2) BS03 CLR 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    774290 8bi0:A (3.2) BS04 MG 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    774291 8bi0:A (3.2) BS05 R1H 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    774292 8bi0:B (3.2) BS01 ATP 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    774293 8bi0:B (3.2) BS02 CLR 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    774294 8bi0:B (3.2) BS03 CLR 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    774295 8bi0:B (3.2) BS04 R1H 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    774296 8bi0:B (3.2) BS05 MG 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    774297 8bi2:A (1.508) BS01 QR7 2.7.10.2 GO:0004672 ... P43405 37270074
    774298 8bi5:A (2.5) BS01 MG 2.7.1.32
    2.7.1.82
    GO:0004103 ... P35790 N/A
    774299 8bi5:A (2.5) BS02 QQS 2.7.1.32
    2.7.1.82
    GO:0004103 ... P35790 N/A
    774300 8bi5:B (2.5) BS01 MG 2.7.1.32
    2.7.1.82
    GO:0004103 ... P35790 N/A
    774301 8bi5:B (2.5) BS02 QQS 2.7.1.32
    2.7.1.82
    GO:0004103 ... P35790 N/A
    774302 8bi6:A (2.4) BS01 MG 2.7.1.32
    2.7.1.82
    GO:0004103 ... P35790 N/A
    774303 8bi6:A (2.4) BS02 CIQ 2.7.1.32
    2.7.1.82
    GO:0004103 ... P35790 N/A
    774304 8bi6:B (2.4) BS01 MG 2.7.1.32
    2.7.1.82
    GO:0004103 ... P35790 N/A
    774305 8bi6:B (2.4) BS02 CIQ 2.7.1.32
    2.7.1.82
    GO:0004103 ... P35790 N/A
    774306 8bi7:A (1.4) BS01 peptide ? GO:0000122 ... P31947 36926879
    774307 8bi7:A (1.4) BS02 MG ? GO:0000122 ... P31947 36926879
    774308 8bia:A (2.4) BS01 peptide ? N/A Q14160 N/A
    774309 8bib:A (2.3) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    774310 8bib:A (2.3) BS02 QOI ? GO:0008168 ... Q7MY08 36963398
    774311 8bib:B (2.3) BS01 CO3 ? GO:0008168 ... Q7MY08 36963398
    774312 8bib:B (2.3) BS02 SAH ? GO:0008168 ... Q7MY08 36963398
    774313 8bib:B (2.3) BS03 QOI ? GO:0008168 ... Q7MY08 36963398
    774314 8bib:C (2.3) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    774315 8bib:C (2.3) BS02 QOI ? GO:0008168 ... Q7MY08 36963398
    774316 8bib:C (2.3) BS03 CO3 ? GO:0008168 ... Q7MY08 36963398
    774317 8bib:D (2.3) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    774318 8bib:D (2.3) BS02 QOI ? GO:0008168 ... Q7MY08 36963398
    774319 8bic:A (1.85) BS01 SAH ? GO:0008168 ... Q7MY07 36963398
    774320 8bic:B (1.85) BS01 SAH ? GO:0008168 ... Q7MY07 36963398
    774321 8bid:A (1.75) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    774322 8bid:A (1.75) BS02 QPF ? GO:0008168 ... Q7MY08 36963398
    774323 8bid:B (1.75) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    774324 8bid:B (1.75) BS02 QPF ? GO:0008168 ... Q7MY08 36963398
    774325 8bid:C (1.75) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    774326 8bid:C (1.75) BS02 QPF ? GO:0008168 ... Q7MY08 36963398
    774327 8bid:D (1.75) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    774328 8bid:D (1.75) BS02 QPF ? GO:0008168 ... Q7MY08 36963398
    774329 8bie:A (2.25) BS01 SAH ? GO:0008168 ... Q7MY05 36963398
    774330 8bie:B (2.25) BS01 SAH ? GO:0008168 ... Q7MY05 36963398
    774331 8bif:A (2.0) BS01 SAH ? GO:0008168 ... Q7MY06 36963398
    774332 8bif:B (2.0) BS01 SAH ? GO:0008168 ... Q7MY06 36963398
    774333 8bif:C (2.0) BS01 SAH ? GO:0008168 ... Q7MY06 36963398
    774334 8bif:D (2.0) BS01 SAH ? GO:0008168 ... Q7MY06 36963398
    774335 8big:A (2.8) BS01 SAH ? GO:0008168 ... Q7MY04 36963398
    774336 8big:B (2.8) BS01 SAH ? GO:0008168 ... Q7MY04 36963398
    774337 8big:C (2.8) BS01 SAH ? GO:0008168 ... Q7MY04 36963398
    774338 8big:D (2.8) BS01 SAH ? GO:0008168 ... Q7MY04 36963398
    774339 8big:E (2.8) BS01 SAH ? GO:0008168 ... Q7MY04 36963398
    774340 8big:F (2.8) BS01 SAH ? GO:0008168 ... Q7MY04 36963398
    774341 8big:G (2.8) BS01 SAH ? GO:0008168 ... Q7MY04 36963398
    774342 8big:G (2.8) BS02 MG ? GO:0008168 ... Q7MY04 36963398
    774343 8big:H (2.8) BS01 SAH ? GO:0008168 ... Q7MY04 36963398
    774344 8bih:A (2.4) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    774345 8bih:A (2.4) BS02 QOT ? GO:0008168 ... Q7MY08 36963398
    774346 8bih:B (2.4) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    774347 8bih:B (2.4) BS02 QOT ? GO:0008168 ... Q7MY08 36963398
    774348 8bih:C (2.4) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    774349 8bih:C (2.4) BS02 QOT ? GO:0008168 ... Q7MY08 36963398
    774350 8bih:D (2.4) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    774351 8bih:D (2.4) BS02 QOT ? GO:0008168 ... Q7MY08 36963398
    774352 8bih:E (2.4) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    774353 8bih:E (2.4) BS02 QOT ? GO:0008168 ... Q7MY08 36963398
    774354 8bih:F (2.4) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    774355 8bih:F (2.4) BS02 QOT ? GO:0008168 ... Q7MY08 36963398
    774356 8bih:G (2.4) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    774357 8bih:G (2.4) BS02 QOT ? GO:0008168 ... Q7MY08 36963398
    774358 8bih:H (2.4) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    774359 8bih:H (2.4) BS02 QOT ? GO:0008168 ... Q7MY08 36963398
    774360 8bih:I (2.4) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    774361 8bih:I (2.4) BS02 QOT ? GO:0008168 ... Q7MY08 36963398
    774362 8bih:J (2.4) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    774363 8bih:K (2.4) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    774364 8bih:L (2.4) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    774365 8bii:A (2.8) BS01 SAH ? GO:0008168 ... Q7MY04 36963398
    774366 8bii:B (2.8) BS01 SAH ? GO:0008168 ... Q7MY04 36963398
    774367 8bii:C (2.8) BS01 SAH ? GO:0008168 ... Q7MY04 36963398
    774368 8bii:D (2.8) BS01 SAH ? GO:0008168 ... Q7MY04 36963398
    774369 8bii:E (2.8) BS01 SAH ? GO:0008168 ... Q7MY04 36963398
    774370 8bii:F (2.8) BS01 SAH ? GO:0008168 ... Q7MY04 36963398
    774371 8bii:G (2.8) BS01 SAH ? GO:0008168 ... Q7MY04 36963398
    774372 8bii:H (2.8) BS01 SAH ? GO:0008168 ... Q7MY04 36963398
    774373 8bij:A (1.55) BS01 SAH ? GO:0008168 ... Q7MY05 36963398
    774374 8bij:B (1.55) BS01 SAH ? GO:0008168 ... Q7MY05 36963398
    774375 8bik:A (2.5) BS01 STU 2.7.11.1
    2.7.11.31
    GO:0003682 ... P54646 N/A
    774376 8bik:A (2.5) BS02 QTN 2.7.11.1
    2.7.11.31
    GO:0003682 ... P54646 N/A
    774377 8bik:B (2.5) BS01 QTN ? GO:0005515 ... Q9Y478 N/A
    774378 8bik:C (2.5) BS01 AMP ? GO:0004691 ... P54619 N/A
    774379 8bik:C (2.5) BS02 AMP ? GO:0004691 ... P54619 N/A
    774380 8bik:D (2.5) BS01 STU 2.7.11.1
    2.7.11.31
    GO:0003682 ... P54646 N/A
    774381 8bik:D (2.5) BS02 QTN 2.7.11.1
    2.7.11.31
    GO:0003682 ... P54646 N/A
    774382 8bik:E (2.5) BS01 QTN ? GO:0005515 ... Q9Y478 N/A
    774383 8bik:F (2.5) BS01 AMP ? GO:0004691 ... P54619 N/A
    774384 8bik:F (2.5) BS02 AMP ? GO:0004691 ... P54619 N/A
    774385 8bik:F (2.5) BS03 AMP ? GO:0004691 ... P54619 N/A
    774386 8bil:A (2.04) BS01 rna ? GO:0000027 ... P60422 37553384
    774387 8bil:B (2.04) BS01 rna ? GO:0000027 ... P60438 37553384
    774388 8bil:C (2.04) BS01 rna ? GO:0001070 ... P60723 37553384
    774389 8bil:D (2.04) BS01 rna ? GO:0000027 ... P62399 37553384
    774390 8bil:D (2.04) BS02 rna ? GO:0000027 ... P62399 37553384
    774391 8bil:D (2.04) BS03 rna ? GO:0000027 ... P62399 37553384
    774392 8bil:E (2.04) BS01 rna ? GO:0000027 ... P0AG55 37553384
    774393 8bil:F (2.04) BS01 rna ? GO:0002181 ... P0A7R1 37553384
    774394 8bil:G (2.04) BS01 rna ? GO:0002181 ... P0AA10 37553384
    774395 8bil:H (2.04) BS01 rna ? GO:0002181 ... P0ADY3 37553384
    774396 8bil:I (2.04) BS01 rna ? GO:0002181 ... P02413 37553384
    774397 8bil:J (2.04) BS01 rna ? GO:0000027 ... P0ADY7 37553384
    774398 8bil:K (2.04) BS01 rna ? GO:0000027 ... P0AG44 37553384
    774399 8bil:L (2.04) BS01 rna ? GO:0002181 ... P0C018 37553384
    774400 8bil:L (2.04) BS02 rna ? GO:0002181 ... P0C018 37553384

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).