SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    774401 8b0t:A (2.4) BS02 AU 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 36421689
    774402 8b0v:A (1.7) BS01 CA 3.4.21.88 GO:0003677 ... P37452 39898034
    774403 8b0v:B (1.7) BS01 CA 3.4.21.88 GO:0003677 ... P37452 39898034
    774404 8b0w:A (1.53) BS01 OVD ? GO:0003723 ... P09382 N/A
    774405 8b0w:B (1.53) BS01 OVD ? GO:0003723 ... P09382 N/A
    774406 8b0x:0 (1.55) BS01 rna ? GO:0000027 ... P0A7N9 36841832
    774407 8b0x:1 (1.55) BS01 rna ? GO:0002181 ... P0A7P5 36841832
    774408 8b0x:2 (1.55) BS01 rna ? GO:0002181 ... P0A7Q1 36841832
    774409 8b0x:3 (1.55) BS01 rna ? GO:0002181 ... P0A7Q6 36841832
    774410 8b0x:3 (1.55) BS02 ZN ? GO:0002181 ... P0A7Q6 36841832
    774411 8b0x:B (1.55) BS01 rna ? GO:0000028 ... P0A7V0 36841832
    774412 8b0x:C (1.55) BS01 rna ? GO:0000028 ... P0A7V3 36841832
    774413 8b0x:D (1.55) BS01 rna ? GO:0000028 ... P0A7V8 36841832
    774414 8b0x:E (1.55) BS01 rna ? GO:0000028 ... P0A7W1 36841832
    774415 8b0x:F (1.55) BS01 rna ? GO:0002181 ... P02358 36841832
    774416 8b0x:G (1.55) BS01 rna ? GO:0000028 ... P02359 36841832
    774417 8b0x:H (1.55) BS01 rna ? GO:0000028 ... P0A7W7 36841832
    774418 8b0x:I (1.55) BS01 rna ? GO:0002181 ... P0A7X3 36841832
    774419 8b0x:I (1.55) BS02 rna ? GO:0002181 ... P0A7X3 36841832
    774420 8b0x:J (1.55) BS01 rna ? GO:0000049 ... P0A7R5 36841832
    774421 8b0x:K (1.55) BS01 rna ? GO:0002181 ... P0A7R9 36841832
    774422 8b0x:L (1.55) BS01 rna ? GO:0000049 ... P0A7S3 36841832
    774423 8b0x:M (1.55) BS01 rna ? GO:0000049 ... P0A7S9 36841832
    774424 8b0x:M (1.55) BS02 rna ? GO:0000049 ... P0A7S9 36841832
    774425 8b0x:N (1.55) BS01 rna ? GO:0000028 ... P0AG59 36841832
    774426 8b0x:O (1.55) BS01 rna ? GO:0000028 ... P0ADZ4 36841832
    774427 8b0x:O (1.55) BS02 rna ? GO:0000028 ... P0ADZ4 36841832
    774428 8b0x:P (1.55) BS01 rna ? GO:0000028 ... P0A7T3 36841832
    774429 8b0x:Q (1.55) BS01 rna ? GO:0000028 ... P0AG63 36841832
    774430 8b0x:R (1.55) BS01 rna ? GO:0002181 ... P0A7T7 36841832
    774431 8b0x:S (1.55) BS01 rna ? GO:0002181 ... P0A7U3 36841832
    774432 8b0x:T (1.55) BS01 rna ? GO:0000028 ... P0A7U7 36841832
    774433 8b0x:U (1.55) BS01 rna ? GO:0000028 ... P68679 36841832
    774434 8b0x:c (1.55) BS01 rna ? GO:0000027 ... P60422 36841832
    774435 8b0x:d (1.55) BS01 rna ? GO:0000027 ... P60438 36841832
    774436 8b0x:e (1.55) BS01 rna ? GO:0001070 ... P60723 36841832
    774437 8b0x:f (1.55) BS01 rna ? GO:0000027 ... P62399 36841832
    774438 8b0x:f (1.55) BS02 rna ? GO:0000027 ... P62399 36841832
    774439 8b0x:f (1.55) BS03 rna ? GO:0000027 ... P62399 36841832
    774440 8b0x:g (1.55) BS01 rna ? GO:0000027 ... P0AG55 36841832
    774441 8b0x:h (1.55) BS01 rna ? GO:0002181 ... P0A7R1 36841832
    774442 8b0x:i (1.55) BS01 rna ? GO:0002181 ... P0AA10 36841832
    774443 8b0x:j (1.55) BS01 rna ? GO:0002181 ... P0ADY3 36841832
    774444 8b0x:j (1.55) BS02 rna ? GO:0002181 ... P0ADY3 36841832
    774445 8b0x:k (1.55) BS01 rna ? GO:0002181 ... P02413 36841832
    774446 8b0x:l (1.55) BS01 rna ? GO:0000027 ... P0ADY7 36841832
    774447 8b0x:l (1.55) BS02 rna ? GO:0000027 ... P0ADY7 36841832
    774448 8b0x:m (1.55) BS01 rna ? GO:0000027 ... P0AG44 36841832
    774449 8b0x:n (1.55) BS01 rna ? GO:0002181 ... P0C018 36841832
    774450 8b0x:n (1.55) BS02 rna ? GO:0002181 ... P0C018 36841832
    774451 8b0x:o (1.55) BS01 rna ? GO:0000027 ... P0A7K6 36841832
    774452 8b0x:o (1.55) BS02 rna ? GO:0000027 ... P0A7K6 36841832
    774453 8b0x:p (1.55) BS01 rna ? GO:0000027 ... P0A7L3 36841832
    774454 8b0x:q (1.55) BS01 rna ? GO:0002181 ... P0AG48 36841832
    774455 8b0x:r (1.55) BS01 rna ? GO:0002181 ... P61175 36841832
    774456 8b0x:s (1.55) BS01 rna ? GO:0000027 ... P0ADZ0 36841832
    774457 8b0x:t (1.55) BS01 rna ? GO:0000027 ... P60624 36841832
    774458 8b0x:u (1.55) BS01 rna ? GO:0000027 ... P68919 36841832
    774459 8b0x:v (1.55) BS01 rna ? GO:0000027 ... P0A7L8 36841832
    774460 8b0x:v (1.55) BS02 rna ? GO:0000027 ... P0A7L8 36841832
    774461 8b0x:w (1.55) BS01 rna ? GO:0000027 ... P0A7M2 36841832
    774462 8b0x:x (1.55) BS01 rna ? GO:0000027 ... P0A7M6 36841832
    774463 8b0x:y (1.55) BS01 rna ? GO:0000027 ... P0AG51 36841832
    774464 8b0x:y (1.55) BS02 rna ? GO:0000027 ... P0AG51 36841832
    774465 8b0x:z (1.55) BS01 rna ? GO:0000027 ... P0A7N4 36841832
    774466 8b0z:A (1.23) BS01 OV6 ? GO:0003723 ... P09382 N/A
    774467 8b0z:B (1.23) BS01 OV6 ? GO:0003723 ... P09382 N/A
    774468 8b14:A (2.6) BS01 LU9 ? GO:0009279 ... P06971 36779755
    774469 8b16:A (1.55) BS01 peptide N/A N/A N/A N/A
    774470 8b16:D (1.55) BS01 peptide N/A N/A N/A N/A
    774471 8b16:H (1.55) BS01 peptide N/A N/A N/A N/A
    774472 8b16:H (1.55) BS02 peptide N/A N/A N/A N/A
    774473 8b16:J (1.55) BS01 peptide N/A N/A N/A N/A
    774474 8b16:L (1.55) BS01 peptide N/A N/A N/A N/A
    774475 8b17:A (2.5) BS01 peptide ? GO:0005886 ... P36837 37467108
    774476 8b18:A (2.3) BS01 peptide ? GO:0005886 ... P36837 37467108
    774477 8b19:A (2.45) BS01 peptide ? GO:0005886 ... P36837 37467108
    774478 8b1a:A (2.15) BS01 peptide ? GO:0005886 ... P36837 37467108
    774479 8b1b:A (2.8) BS01 peptide ? GO:0005886 ... P36837 37467108
    774480 8b1c:A (2.56) BS01 peptide ? GO:0005886 ... P36837 37467108
    774481 8b1d:A (2.3) BS01 peptide ? GO:0005886 ... P36837 37467108
    774482 8b1e:A (2.47) BS01 peptide ? GO:0005886 ... P36837 37467108
    774483 8b1f:A (2.35) BS01 peptide ? GO:0005886 ... P36837 37467108
    774484 8b1g:A (2.5) BS01 peptide ? GO:0005886 ... P36837 37467108
    774485 8b1h:A (2.6) BS01 peptide ? GO:0005886 ... P36837 37467108
    774486 8b1i:A (2.55) BS01 peptide ? GO:0005886 ... P36837 37467108
    774487 8b1j:A (2.67) BS01 peptide ? GO:0005886 ... P36837 37467108
    774488 8b1k:A (2.8) BS01 peptide ? GO:0005886 ... P36837 37467108
    774489 8b1n:A (2.0) BS01 MG 2.1.1.228 GO:0002939 ... E4THH1 38903539
    774490 8b1n:A (2.0) BS02 SAM 2.1.1.228 GO:0002939 ... E4THH1 38903539
    774491 8b1n:A (2.0) BS03 SAM 2.1.1.228 GO:0002939 ... E4THH1 38903539
    774492 8b1n:A (2.0) BS04 SAM 2.1.1.228 GO:0002939 ... E4THH1 38903539
    774493 8b1n:B (2.0) BS01 SAM 2.1.1.228 GO:0002939 ... E4THH1 38903539
    774494 8b1n:B (2.0) BS02 MG 2.1.1.228 GO:0002939 ... E4THH1 38903539
    774495 8b1n:B (2.0) BS03 SAM 2.1.1.228 GO:0002939 ... E4THH1 38903539
    774496 8b1n:B (2.0) BS04 SAM 2.1.1.228 GO:0002939 ... E4THH1 38903539
    774497 8b1r:B (3.2) BS01 MG 3.1.11.5
    5.6.2.4
    GO:0000287 ... P08394 36533901
    774498 8b1s:A (1.6) BS01 SAL ? N/A Q5XX06 39100314
    774499 8b1t:B (3.4) BS01 dna 3.1.11.5
    5.6.2.4
    GO:0000287 ... P08394 36533901
    774500 8b1t:B (3.4) BS02 ANP 3.1.11.5
    5.6.2.4
    GO:0000287 ... P08394 36533901
    774501 8b1t:C (3.4) BS01 dna 3.1.11.5 GO:0000724 ... P07648 36533901
    774502 8b1t:D (3.4) BS01 dna 5.6.2.3 GO:0000724 ... P04993 36533901
    774503 8b1u:B (3.8) BS01 dna 3.1.11.5
    5.6.2.4
    GO:0000287 ... P08394 36533901
    774504 8b1u:B (3.8) BS02 ANP 3.1.11.5
    5.6.2.4
    GO:0000287 ... P08394 36533901
    774505 8b1u:C (3.8) BS01 dna 3.1.11.5 GO:0000724 ... P07648 36533901
    774506 8b1u:D (3.8) BS01 dna 5.6.2.3 GO:0000724 ... P04993 36533901
    774507 8b1v:A (1.882) BS01 ORZ ? GO:0004022 ... A0A5B8X8Z0 36198083
    774508 8b1v:A (1.882) BS02 ZN ? GO:0004022 ... A0A5B8X8Z0 36198083
    774509 8b1v:B (1.882) BS01 ORZ ? GO:0004022 ... A0A5B8X8Z0 36198083
    774510 8b1v:B (1.882) BS02 ZN ? GO:0004022 ... A0A5B8X8Z0 36198083
    774511 8b1w:A (1.7) BS01 ZN 3.5.2.6 GO:0008800 ... F6IAY7 38139809
    774512 8b1w:A (1.7) BS02 ZN 3.5.2.6 GO:0008800 ... F6IAY7 38139809
    774513 8b1w:A (1.7) BS03 CA 3.5.2.6 GO:0008800 ... F6IAY7 38139809
    774514 8b1w:A (1.7) BS04 CA 3.5.2.6 GO:0008800 ... F6IAY7 38139809
    774515 8b1w:A (1.7) BS05 OQU 3.5.2.6 GO:0008800 ... F6IAY7 38139809
    774516 8b1w:B (1.7) BS01 ZN 3.5.2.6 GO:0008800 ... F6IAY7 38139809
    774517 8b1w:B (1.7) BS02 ZN 3.5.2.6 GO:0008800 ... F6IAY7 38139809
    774518 8b1w:B (1.7) BS03 CA 3.5.2.6 GO:0008800 ... F6IAY7 38139809
    774519 8b1w:B (1.7) BS04 CA 3.5.2.6 GO:0008800 ... F6IAY7 38139809
    774520 8b1w:B (1.7) BS05 OQU 3.5.2.6 GO:0008800 ... F6IAY7 38139809
    774521 8b1y:A (1.12) BS01 CA 3.4.21.36 GO:0004252 ... P00772 N/A
    774522 8b1z:A (1.6) BS01 ZN 3.5.2.6 GO:0008800 ... F6IAY7 38139809
    774523 8b1z:A (1.6) BS02 ZN 3.5.2.6 GO:0008800 ... F6IAY7 38139809
    774524 8b1z:A (1.6) BS03 CA 3.5.2.6 GO:0008800 ... F6IAY7 38139809
    774525 8b1z:A (1.6) BS04 ORL 3.5.2.6 GO:0008800 ... F6IAY7 38139809
    774526 8b1z:B (1.6) BS01 ZN 3.5.2.6 GO:0008800 ... F6IAY7 38139809
    774527 8b1z:B (1.6) BS02 ZN 3.5.2.6 GO:0008800 ... F6IAY7 38139809
    774528 8b1z:B (1.6) BS03 ORL 3.5.2.6 GO:0008800 ... F6IAY7 38139809
    774529 8b20:A (1.78) BS01 ZN 3.5.2.6 GO:0008800 ... F6IAY7 38139809
    774530 8b20:A (1.78) BS02 ZN 3.5.2.6 GO:0008800 ... F6IAY7 38139809
    774531 8b20:A (1.78) BS03 CA 3.5.2.6 GO:0008800 ... F6IAY7 38139809
    774532 8b20:A (1.78) BS04 CA 3.5.2.6 GO:0008800 ... F6IAY7 38139809
    774533 8b20:A (1.78) BS05 OQK 3.5.2.6 GO:0008800 ... F6IAY7 38139809
    774534 8b20:B (1.78) BS01 ZN 3.5.2.6 GO:0008800 ... F6IAY7 38139809
    774535 8b20:B (1.78) BS02 ZN 3.5.2.6 GO:0008800 ... F6IAY7 38139809
    774536 8b20:B (1.78) BS03 CA 3.5.2.6 GO:0008800 ... F6IAY7 38139809
    774537 8b22:A (3.98) BS01 MG 7.2.3.1 GO:0000287 ... Q9S5X0 38182815
    774538 8b22:A (3.98) BS02 MG 7.2.3.1 GO:0000287 ... Q9S5X0 38182815
    774539 8b23:A (3.84) BS01 MG 7.2.3.1 GO:0000287 ... Q9S5X0 38182815
    774540 8b23:A (3.84) BS02 MG 7.2.3.1 GO:0000287 ... Q9S5X0 38182815
    774541 8b23:A (3.84) BS03 MG 7.2.3.1 GO:0000287 ... Q9S5X0 38182815
    774542 8b24:A (4.53) BS01 MG 7.2.3.1 GO:0000287 ... Q9S5X0 38182815
    774543 8b24:A (4.53) BS02 MG 7.2.3.1 GO:0000287 ... Q9S5X0 38182815
    774544 8b24:A (4.53) BS03 MG 7.2.3.1 GO:0000287 ... Q9S5X0 38182815
    774545 8b24:A (4.53) BS04 MG 7.2.3.1 GO:0000287 ... Q9S5X0 38182815
    774546 8b24:A (4.53) BS05 MG 7.2.3.1 GO:0000287 ... Q9S5X0 38182815
    774547 8b24:B (4.53) BS01 MG 7.2.3.1 GO:0000287 ... Q9S5X0 38182815
    774548 8b24:B (4.53) BS02 MG 7.2.3.1 GO:0000287 ... Q9S5X0 38182815
    774549 8b24:B (4.53) BS03 MG 7.2.3.1 GO:0000287 ... Q9S5X0 38182815
    774550 8b25:A (2.24) BS01 OSO ? GO:0004022 ... A0A5B8X8Z0 36198083
    774551 8b25:A (2.24) BS02 ZN ? GO:0004022 ... A0A5B8X8Z0 36198083
    774552 8b25:B (2.24) BS01 OSO ? GO:0004022 ... A0A5B8X8Z0 36198083
    774553 8b25:B (2.24) BS02 ZN ? GO:0004022 ... A0A5B8X8Z0 36198083
    774554 8b26:A (2.42) BS01 ZN ? GO:0004022 ... A0A5B8X8Z0 36198083
    774555 8b26:B (2.42) BS01 ZN ? GO:0004022 ... A0A5B8X8Z0 36198083
    774556 8b29:A (1.7) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 36604341
    774557 8b2a:AAA (1.65) BS01 PVI 4.2.1.10 GO:0003855 ... Q2YWJ9 36762206
    774558 8b2a:BBB (1.65) BS01 PVI 4.2.1.10 GO:0003855 ... Q2YWJ9 36762206
    774559 8b2b:AAA (1.9) BS01 PVI 4.2.1.10 GO:0003855 ... P24670 36762206
    774560 8b2b:BBB (1.9) BS01 PVI 4.2.1.10 GO:0003855 ... P24670 36762206
    774561 8b2c:AAA (1.55) BS01 OVU 4.2.1.10 GO:0003855 ... P24670 36762206
    774562 8b2d:A (1.62) BS01 FAD 1.14.13.148 GO:0004499 ... F5SYD3 37222584
    774563 8b2d:A (1.62) BS02 NAP 1.14.13.148 GO:0004499 ... F5SYD3 37222584
    774564 8b2d:B (1.62) BS01 FAD 1.14.13.148 GO:0004499 ... F5SYD3 37222584
    774565 8b2d:B (1.62) BS02 NAP 1.14.13.148 GO:0004499 ... F5SYD3 37222584
    774566 8b2f:A (1.183) BS01 peptide N/A N/A A0AA82WPC9 37428847
    774567 8b2f:B (1.183) BS01 peptide N/A N/A A0AA82WPC9 37428847
    774568 8b2g:A (1.5) BS01 ZN N/A N/A A0AA82WPD0 37428847
    774569 8b2g:B (1.5) BS01 ZN N/A N/A A0AA82WPD0 37428847
    774570 8b2h:A (2.36) BS01 ZN ? N/A G2QV10 37428847
    774571 8b2i:A (1.4) BS01 peptide ? GO:0001836 ... P31947 36926879
    774572 8b2i:A (1.4) BS02 OQ9 ? GO:0001836 ... P31947 36926879
    774573 8b2j:A (2.174) BS01 GJF ? GO:0002218 ... Q86WV6 N/A
    774574 8b2j:A (2.174) BS02 CA ? GO:0002218 ... Q86WV6 N/A
    774575 8b2j:B (2.174) BS01 GJF ? GO:0002218 ... Q86WV6 N/A
    774576 8b2j:B (2.174) BS02 CA ? GO:0002218 ... Q86WV6 N/A
    774577 8b2k:A (1.4) BS01 peptide ? GO:0001836 ... P31947 36926879
    774578 8b2k:A (1.4) BS02 MG ? GO:0001836 ... P31947 36926879
    774579 8b2k:A (1.4) BS03 OQ3 ? GO:0001836 ... P31947 36926879
    774580 8b2l:A1 (2.2) BS01 rna ? GO:0003723 ... A0A1S4DQ51 37156858
    774581 8b2l:C1 (2.2) BS01 rna ? GO:0003735 ... A0A1S4B129 37156858
    774582 8b2l:D1 (2.2) BS01 rna ? GO:0003729 ... A0A1S3Z9G2 37156858
    774583 8b2l:D3 (2.2) BS01 rna ? GO:0003723 ... A0A1S4CSN1 37156858
    774584 8b2l:D3 (2.2) BS02 rna ? GO:0003723 ... A0A1S4CSN1 37156858
    774585 8b2l:E1 (2.2) BS01 rna ? GO:0000028 ... A0A1S3Y949 37156858
    774586 8b2l:E3 (2.2) BS01 rna ? GO:0003723 ... A0A1S4A807 37156858
    774587 8b2l:F1 (2.2) BS01 rna ? GO:0003735 ... Q285L8 37156858
    774588 8b2l:F1 (2.2) BS02 rna ? GO:0003735 ... Q285L8 37156858
    774589 8b2l:F3 (2.2) BS01 rna ? GO:0002181 ... A0A1S4D5P7 37156858
    774590 8b2l:F3 (2.2) BS02 rna ? GO:0002181 ... A0A1S4D5P7 37156858
    774591 8b2l:G1 (2.2) BS01 rna ? GO:0000447 ... A0A1S4A3T4 37156858
    774592 8b2l:G3 (2.2) BS01 rna ? GO:0002181 ... A0A1S4DF55 37156858
    774593 8b2l:H1 (2.2) BS01 rna ? GO:0002181 ... A0A1S3ZXI6 37156858
    774594 8b2l:H3 (2.2) BS01 rna ? GO:0003723 ... A0A1S3X0I4 37156858
    774595 8b2l:H3 (2.2) BS02 rna ? GO:0003723 ... A0A1S3X0I4 37156858
    774596 8b2l:I1 (2.2) BS01 rna ? GO:0003735 ... A0A076L2E2 37156858
    774597 8b2l:I3 (2.2) BS01 rna ? GO:0002181 ... A0A1S4CP52 37156858
    774598 8b2l:I3 (2.2) BS02 rna ? GO:0002181 ... A0A1S4CP52 37156858
    774599 8b2l:J1 (2.2) BS01 rna ? GO:0003729 ... A0A1S4CWI7 37156858
    774600 8b2l:J1 (2.2) BS02 ZN ? GO:0003729 ... A0A1S4CWI7 37156858

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).