SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    775001 8bm3:D (3.5) BS01 FPP 3.1.3.27
    3.1.3.4
    3.6.1.27
    3.6.1.75
    GO:0000810 ... P0A924 N/A
    775002 8bm5:A (1.4) BS01 peptide ? GO:0000122 ... P31947 36926879
    775003 8bm5:A (1.4) BS02 QQ0 ? GO:0000122 ... P31947 36926879
    775004 8bm8:A (1.68) BS01 QT1 2.7.10.1 GO:0004672 ... P29317 N/A
    775005 8bmd:A (2.8) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775006 8bmd:B (2.8) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775007 8bmd:C (2.8) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775008 8bmd:D (2.8) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775009 8bmd:E (2.8) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775010 8bmd:F (2.8) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775011 8bmd:G (2.8) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775012 8bmd:H (2.8) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775013 8bmd:I (2.8) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775014 8bmd:J (2.8) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775015 8bmd:K (2.8) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775016 8bmd:L (2.8) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775017 8bmd:M (2.8) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775018 8bmd:N (2.8) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775019 8bmo:A (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775020 8bmo:B (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775021 8bmo:C (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775022 8bmo:E (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775023 8bmo:F (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775024 8bmo:H (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775025 8bmo:I (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775026 8bmo:J (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775027 8bmo:L (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775028 8bmo:M (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775029 8bmo:O (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775030 8bmo:P (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775031 8bmo:R (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775032 8bmo:S (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775033 8bmp:A (3.2) BS01 ATP 7.-.-.- GO:0005524 ... Q1GBJ0 37491368
    775034 8bmp:B (3.2) BS01 ADP 3.6.3.- GO:0005524 ... Q1GBI9 37491368
    775035 8bmq:A (3.6) BS01 ANP 7.-.-.- GO:0005524 ... Q1GBJ0 37491368
    775036 8bmq:B (3.6) BS01 ANP 3.6.3.- GO:0005524 ... Q1GBI9 37491368
    775037 8bms:A (2.6) BS01 ATP 7.-.-.- GO:0005524 ... Q1GBJ0 37491368
    775038 8bms:A (2.6) BS02 MG 7.-.-.- GO:0005524 ... Q1GBJ0 37491368
    775039 8bms:A (2.6) BS03 ATP 7.-.-.- GO:0005524 ... Q1GBJ0 37491368
    775040 8bms:B (2.6) BS01 ATP 3.6.3.- GO:0005524 ... Q1GBI9 37491368
    775041 8bms:B (2.6) BS02 ATP 3.6.3.- GO:0005524 ... Q1GBI9 37491368
    775042 8bms:B (2.6) BS03 MG 3.6.3.- GO:0005524 ... Q1GBI9 37491368
    775043 8bmt:A (2.5) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775044 8bmt:BA (2.5) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775045 8bmt:C (2.5) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775046 8bmt:E (2.5) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775047 8bmt:G (2.5) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775048 8bmt:I (2.5) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775049 8bmt:J (2.5) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775050 8bmt:L (2.5) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775051 8bmt:N (2.5) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775052 8bmt:P (2.5) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775053 8bmt:R (2.5) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775054 8bmt:T (2.5) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775055 8bmt:X (2.5) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775056 8bmt:Z (2.5) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    775057 8bmu:A (1.6) BS01 FAD ? GO:0000166 ... Q0UIL6 37903872
    775058 8bmv:A (1.95) BS01 URC N/A N/A Q88R14 38997289
    775059 8bmv:B (1.95) BS01 URC N/A N/A Q88R14 38997289
    775060 8bmw:F (3.5) BS01 rna ? GO:0051607 ... Q97YA7 36843655
    775061 8bmw:G (3.5) BS01 rna ? GO:0051607 ... Q97YA7 36843655
    775062 8bmw:H (3.5) BS01 rna ? GO:0051607 ... Q97YA6 36843655
    775063 8bmw:I (3.5) BS01 rna ? GO:0051607 ... Q97YA6 36843655
    775064 8bmw:J (3.5) BS01 rna ? GO:0051607 ... Q97YA5 36843655
    775065 8bmw:L (3.5) BS01 rna ? GO:0051607 ... Q97YA2 36843655
    775066 8bmw:M (3.5) BS01 rna ? GO:0051607 ... Q97YA1 36843655
    775067 8bmw:N (3.5) BS01 rna ? GO:0051607 ... Q97YA0 36843655
    775068 8bmy:A (1.72) BS01 CNC ? N/A Q8A6D0 37543597
    775069 8bmy:B (1.72) BS01 CNC ? N/A Q8A6D0 37543597
    775070 8bmz:A (2.3) BS01 B1Z ? N/A Q8A6D0 37543597
    775071 8bmz:B (2.3) BS01 B1Z ? N/A Q8A6D0 37543597
    775072 8bn0:A (1.33) BS01 CBY ? N/A Q8A6D0 37543597
    775073 8bn1:A (2.61) BS01 peptide 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 37433017
    775074 8bn1:A (2.61) BS02 ZN 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 37433017
    775075 8bn1:B (2.61) BS01 peptide 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 37433017
    775076 8bn1:B (2.61) BS02 ZN 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 37433017
    775077 8bn2:A (1.63) BS01 CA ? GO:0015276 ... Q9ULK0 38060673
    775078 8bn2:A (1.63) BS02 DSN ? GO:0015276 ... Q9ULK0 38060673
    775079 8bn2:B (1.63) BS01 CA ? GO:0015276 ... Q9ULK0 38060673
    775080 8bn3:B (2.4) BS01 rna ? GO:0000055 ... P0CX43 38324474
    775081 8bn3:C0 (2.4) BS01 rna ? GO:0000054 ... Q08745 38324474
    775082 8bn3:C1 (2.4) BS01 rna ? GO:0000028 ... P0CX47 38324474
    775083 8bn3:C3 (2.4) BS01 rna ? GO:0000462 ... P05756 38324474
    775084 8bn3:C3 (2.4) BS02 rna ? GO:0000462 ... P05756 38324474
    775085 8bn3:C4 (2.4) BS01 rna ? GO:0000028 ... P39516 38324474
    775086 8bn3:C5 (2.4) BS01 rna ? GO:0003723 ... Q01855 38324474
    775087 8bn3:C6 (2.4) BS01 rna ? GO:0000462 ... P0CX51 38324474
    775088 8bn3:C7 (2.4) BS01 rna ? GO:0003735 ... P02407 38324474
    775089 8bn3:C8 (2.4) BS01 rna ? GO:0000054 ... P0CX55 38324474
    775090 8bn3:C9 (2.4) BS01 rna ? GO:0000028 ... P07280 38324474
    775091 8bn3:D0 (2.4) BS01 rna ? GO:0003723 ... P38701 38324474
    775092 8bn3:D1 (2.4) BS01 rna ? GO:0000447 ... P0C0V8 38324474
    775093 8bn3:D2 (2.4) BS01 rna ? GO:0002181 ... P0C0W1 38324474
    775094 8bn3:D3 (2.4) BS01 rna ? GO:0000462 ... P0CX29 38324474
    775095 8bn3:D4 (2.4) BS01 rna ? GO:0000462 ... P0CX31 38324474
    775096 8bn3:D5 (2.4) BS01 rna ? N/A Q3E792 38324474
    775097 8bn3:D6 (2.4) BS01 rna ? GO:0003735 ... P39939 38324474
    775098 8bn3:D6 (2.4) BS02 ZN ? GO:0003735 ... P39939 38324474
    775099 8bn3:D7 (2.4) BS01 rna ? GO:0000028 ... P35997 38324474
    775100 8bn3:D8 (2.4) BS01 rna ? GO:0000028 ... Q3E7X9 38324474
    775101 8bn3:D9 (2.4) BS01 rna ? GO:0002181 ... P41057 38324474
    775102 8bn3:D9 (2.4) BS02 ZN ? GO:0002181 ... P41057 38324474
    775103 8bn3:E0 (2.4) BS01 rna ? GO:0002181 ... P0CX33 38324474
    775104 8bn3:E1 (2.4) BS01 rna ? GO:0003735 ... P05759 38324474
    775105 8bn3:L2 (2.4) BS01 rna ? GO:0002181 ... P0CX45 38324474
    775106 8bn3:L2 (2.4) BS02 rna ? GO:0002181 ... P0CX45 38324474
    775107 8bn3:L3 (2.4) BS01 rna ? GO:0000027 ... P14126 38324474
    775108 8bn3:L4 (2.4) BS01 rna ? GO:0002181 ... P10664 38324474
    775109 8bn3:L4 (2.4) BS02 rna ? GO:0002181 ... P10664 38324474
    775110 8bn3:L5 (2.4) BS01 rna ? GO:0000027 ... P26321 38324474
    775111 8bn3:L5 (2.4) BS02 rna ? GO:0000027 ... P26321 38324474
    775112 8bn3:L6 (2.4) BS01 rna N/A GO:0003735 ... Q02326 38324474
    775113 8bn3:L7 (2.4) BS01 rna ? GO:0000463 ... P05737 38324474
    775114 8bn3:L7 (2.4) BS02 rna ? GO:0000463 ... P05737 38324474
    775115 8bn3:L8 (2.4) BS01 rna ? GO:0000470 ... P17076 38324474
    775116 8bn3:L8 (2.4) BS02 rna ? GO:0000470 ... P17076 38324474
    775117 8bn3:L9 (2.4) BS01 rna ? GO:0002181 ... P05738 38324474
    775118 8bn3:M0 (2.4) BS01 rna ? GO:0000027 ... P41805 38324474
    775119 8bn3:M0 (2.4) BS02 rna ? GO:0000027 ... P41805 38324474
    775120 8bn3:M1 (2.4) BS01 rna ? GO:0000027 ... P0C0W9 38324474
    775121 8bn3:M1 (2.4) BS02 rna ? GO:0000027 ... P0C0W9 38324474
    775122 8bn3:M3 (2.4) BS01 rna ? GO:0002181 ... Q12690 38324474
    775123 8bn3:M3 (2.4) BS02 rna ? GO:0002181 ... Q12690 38324474
    775124 8bn3:M4 (2.4) BS01 rna ? GO:0000027 ... P36105 38324474
    775125 8bn3:M5 (2.4) BS01 rna ? GO:0002181 ... P05748 38324474
    775126 8bn3:M5 (2.4) BS02 rna ? GO:0002181 ... P05748 38324474
    775127 8bn3:M6 (2.4) BS01 rna ? GO:0000470 ... P26784 38324474
    775128 8bn3:M7 (2.4) BS01 rna ? GO:0000448 ... P05740 38324474
    775129 8bn3:M7 (2.4) BS02 rna ? GO:0000448 ... P05740 38324474
    775130 8bn3:M8 (2.4) BS01 rna ? GO:0002181 ... P0CX49 38324474
    775131 8bn3:M9 (2.4) BS01 rna ? GO:0002181 ... P0CX82 38324474
    775132 8bn3:M9 (2.4) BS02 rna ? GO:0002181 ... P0CX82 38324474
    775133 8bn3:N0 (2.4) BS01 rna ? GO:0002181 ... P0CX23 38324474
    775134 8bn3:N0 (2.4) BS02 rna ? GO:0002181 ... P0CX23 38324474
    775135 8bn3:N1 (2.4) BS01 rna ? GO:0002181 ... Q02753 38324474
    775136 8bn3:N1 (2.4) BS02 rna ? GO:0002181 ... Q02753 38324474
    775137 8bn3:N2 (2.4) BS01 rna ? GO:0003735 ... P05749 38324474
    775138 8bn3:N3 (2.4) BS01 rna ? GO:0002181 ... P0CX41 38324474
    775139 8bn3:N4 (2.4) BS01 rna ? GO:0003735 ... P04449 38324474
    775140 8bn3:N5 (2.4) BS01 rna ? GO:0003735 ... P04456 38324474
    775141 8bn3:N5 (2.4) BS02 rna ? GO:0003735 ... P04456 38324474
    775142 8bn3:N6 (2.4) BS01 rna ? GO:0002181 ... P05743 38324474
    775143 8bn3:N6 (2.4) BS02 rna ? GO:0002181 ... P05743 38324474
    775144 8bn3:N7 (2.4) BS01 rna ? GO:0002181 ... P0C2H6 38324474
    775145 8bn3:N8 (2.4) BS01 rna ? GO:0002181 ... P02406 38324474
    775146 8bn3:N9 (2.4) BS01 rna ? GO:0002181 ... P05747 38324474
    775147 8bn3:O0 (2.4) BS01 rna ? GO:0002181 ... P14120 38324474
    775148 8bn3:O1 (2.4) BS01 rna ? GO:0002181 ... P0C2H8 38324474
    775149 8bn3:O2 (2.4) BS01 rna ? GO:0002181 ... P38061 38324474
    775150 8bn3:O3 (2.4) BS01 rna ? GO:0000027 ... P05744 38324474
    775151 8bn3:O4 (2.4) BS01 rna ? GO:0002181 ... P87262 38324474
    775152 8bn3:O4 (2.4) BS02 ZN ? GO:0002181 ... P87262 38324474
    775153 8bn3:O5 (2.4) BS01 rna ? GO:0000463 ... P0CX84 38324474
    775154 8bn3:O5 (2.4) BS02 rna ? GO:0000463 ... P0CX84 38324474
    775155 8bn3:O6 (2.4) BS01 rna ? GO:0002181 ... P05745 38324474
    775156 8bn3:O7 (2.4) BS01 rna ? GO:0000448 ... P49166 38324474
    775157 8bn3:O7 (2.4) BS02 rna ? GO:0000448 ... P49166 38324474
    775158 8bn3:O7 (2.4) BS03 ZN ? GO:0000448 ... P49166 38324474
    775159 8bn3:O8 (2.4) BS01 rna ? GO:0002181 ... P49167 38324474
    775160 8bn3:O9 (2.4) BS01 rna ? GO:0002181 ... P04650 38324474
    775161 8bn3:O9 (2.4) BS02 rna ? GO:0002181 ... P04650 38324474
    775162 8bn3:Q0 (2.4) BS01 rna ? GO:0003735 ... P0CH08 38324474
    775163 8bn3:Q0 (2.4) BS02 ZN ? GO:0003735 ... P0CH08 38324474
    775164 8bn3:Q2 (2.4) BS01 rna ? GO:0002181 ... P0CX27 38324474
    775165 8bn3:Q2 (2.4) BS02 ZN ? GO:0002181 ... P0CX27 38324474
    775166 8bn3:Q3 (2.4) BS01 rna ? GO:0002181 ... P0CX25 38324474
    775167 8bn3:Q3 (2.4) BS02 ZN ? GO:0002181 ... P0CX25 38324474
    775168 8bn3:S0 (2.4) BS01 rna ? GO:0000028 ... P32905 38324474
    775169 8bn3:S1 (2.4) BS01 rna ? GO:0003735 ... P33442 38324474
    775170 8bn3:S2 (2.4) BS01 rna ? GO:0003723 ... P25443 38324474
    775171 8bn3:S3 (2.4) BS01 rna ? GO:0000054 ... P05750 38324474
    775172 8bn3:S4 (2.4) BS01 rna ? GO:0002181 ... P0CX35 38324474
    775173 8bn3:S5 (2.4) BS01 rna ? GO:0000028 ... P26783 38324474
    775174 8bn3:S6 (2.4) BS01 rna ? GO:0000462 ... P0CX37 38324474
    775175 8bn3:S7 (2.4) BS01 rna ? GO:0002181 ... P26786 38324474
    775176 8bn3:S8 (2.4) BS01 rna ? GO:0000462 ... P0CX39 38324474
    775177 8bn3:S8 (2.4) BS02 rna ? GO:0000462 ... P0CX39 38324474
    775178 8bn3:S9 (2.4) BS01 rna ? GO:0000462 ... O13516 38324474
    775179 8bn3:SM (2.4) BS01 rna ? N/A P39015 38324474
    775180 8bn3:SM (2.4) BS02 rna ? N/A P39015 38324474
    775181 8bn3:SR (2.4) BS01 rna ? GO:0001965 ... P38011 38324474
    775182 8bn3:eI (2.4) BS01 rna ? GO:0002182 ... P23301 38324474
    775183 8bn5:A (1.9) BS01 CA ? GO:0015276 ... Q9ULK0 38060673
    775184 8bn5:A (1.9) BS02 ABU ? GO:0015276 ... Q9ULK0 38060673
    775185 8bn5:B (1.9) BS01 CA ? GO:0015276 ... Q9ULK0 38060673
    775186 8bn5:B (1.9) BS02 ABU ? GO:0015276 ... Q9ULK0 38060673
    775187 8bn6:A (1.6) BS01 CA 5.6.2.2 GO:0003677 ... Q9I7C2 36877255
    775188 8bn6:A (1.6) BS02 R53 5.6.2.2 GO:0003677 ... Q9I7C2 36877255
    775189 8bn8:AAA (2.213) BS01 QWR 2.1.1.348 GO:0001510 ... Q86U44 37548590
    775190 8bns:A (3.24) BS01 ADP N/A GO:0000723 ... N/A 36838444
    775191 8bns:B (3.24) BS01 ADP N/A GO:0000723 ... N/A 36838444
    775192 8bns:C (3.24) BS01 ADP N/A GO:0000723 ... N/A 36838444
    775193 8bns:D (3.24) BS01 ADP N/A GO:0000723 ... N/A 36838444
    775194 8bnv:A (2.86) BS01 MG ? GO:0000723 ... D3PAZ1 36838444
    775195 8bnx:A (3.12) BS01 ANP ? GO:0000723 ... D3PAZ1 36838444
    775196 8bo1:A (2.501) BS01 LAB 3.6.4.- GO:0000287 ... P68135 37747912
    775197 8bo1:A (2.501) BS02 ATP 3.6.4.- GO:0000287 ... P68135 37747912
    775198 8bo1:B (2.501) BS01 3AT 4.6.1.1 GO:0005576 ... A0A9P1NJI6 37747912
    775199 8bo1:B (2.501) BS02 MN 4.6.1.1 GO:0005576 ... A0A9P1NJI6 37747912
    775200 8bo1:B (2.501) BS03 MG 4.6.1.1 GO:0005576 ... A0A9P1NJI6 37747912

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).