SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    775401 8b6v:C (3.1) BS01 MG ? N/A N/A 37443175
    775402 8b6v:D (3.1) BS01 MG ? N/A N/A 37443175
    775403 8b6v:E (3.1) BS01 MG ? N/A N/A 37443175
    775404 8b6v:F (3.1) BS01 MG ? N/A N/A 37443175
    775405 8b6v:G (3.1) BS01 MG ? N/A N/A 37443175
    775406 8b6v:H (3.1) BS01 MG ? N/A N/A 37443175
    775407 8b6v:I (3.1) BS01 MG ? N/A N/A 37443175
    775408 8b6v:J (3.1) BS01 MG ? N/A N/A 37443175
    775409 8b6v:K (3.1) BS01 MG ? N/A N/A 37443175
    775410 8b6v:L (3.1) BS01 MG ? N/A N/A 37443175
    775411 8b6v:M (3.1) BS01 MG ? N/A N/A 37443175
    775412 8b6v:N (3.1) BS01 MG ? N/A N/A 37443175
    775413 8b6v:O (3.1) BS01 MG ? N/A N/A 37443175
    775414 8b6v:P (3.1) BS01 MG ? N/A N/A 37443175
    775415 8b6v:Q (3.1) BS01 MG ? N/A N/A 37443175
    775416 8b6v:R (3.1) BS01 MG ? N/A N/A 37443175
    775417 8b6v:S (3.1) BS01 MG ? N/A N/A 37443175
    775418 8b6v:T (3.1) BS01 MG ? N/A N/A 37443175
    775419 8b6v:U (3.1) BS01 MG ? N/A N/A 37443175
    775420 8b6v:V (3.1) BS01 MG ? N/A N/A 37443175
    775421 8b6v:W (3.1) BS01 MG ? N/A N/A 37443175
    775422 8b6w:A (2.6) BS01 MG ? N/A N/A 37443175
    775423 8b6w:C (2.6) BS01 MG ? N/A N/A 37443175
    775424 8b6w:D (2.6) BS01 MG ? N/A N/A 37443175
    775425 8b6w:E (2.6) BS01 MG ? N/A N/A 37443175
    775426 8b6w:F (2.6) BS01 MG ? N/A N/A 37443175
    775427 8b6w:G (2.6) BS01 MG ? N/A N/A 37443175
    775428 8b6w:H (2.6) BS01 MG ? N/A N/A 37443175
    775429 8b6w:I (2.6) BS01 MG ? N/A N/A 37443175
    775430 8b6w:J (2.6) BS01 MG ? N/A N/A 37443175
    775431 8b6w:K (2.6) BS01 MG ? N/A N/A 37443175
    775432 8b6w:L (2.6) BS01 MG ? N/A N/A 37443175
    775433 8b6w:M (2.6) BS01 MG ? N/A N/A 37443175
    775434 8b6w:N (2.6) BS01 MG ? N/A N/A 37443175
    775435 8b6w:O (2.6) BS01 MG ? N/A N/A 37443175
    775436 8b6w:P (2.6) BS01 MG ? N/A N/A 37443175
    775437 8b6w:Q (2.6) BS01 MG ? N/A N/A 37443175
    775438 8b6w:R (2.6) BS01 MG ? N/A N/A 37443175
    775439 8b6w:S (2.6) BS01 MG ? N/A N/A 37443175
    775440 8b6w:T (2.6) BS01 MG ? N/A N/A 37443175
    775441 8b6w:U (2.6) BS01 MG ? N/A N/A 37443175
    775442 8b6w:V (2.6) BS01 MG ? N/A N/A 37443175
    775443 8b6z:A (2.9) BS01 rna ? GO:0003746 ... Q05639 36697828
    775444 8b70:A (3.3) BS01 2BA ? GO:0005886 ... P96589 37344476
    775445 8b70:A (3.3) BS02 K ? GO:0005886 ... P96589 37344476
    775446 8b70:B (3.3) BS01 2BA ? GO:0005886 ... P96589 37344476
    775447 8b70:B (3.3) BS02 2BA ? GO:0005886 ... P96589 37344476
    775448 8b70:B (3.3) BS03 K ? GO:0005886 ... P96589 37344476
    775449 8b71:A (3.8) BS01 2BA ? GO:0005886 ... P96589 37344476
    775450 8b71:A (3.8) BS02 2BA ? GO:0005886 ... P96589 37344476
    775451 8b71:B (3.8) BS01 2BA ? GO:0005886 ... P96589 37344476
    775452 8b71:B (3.8) BS02 2BA ? GO:0005886 ... P96589 37344476
    775453 8b72:A (1.87) BS01 M25 4.2.1.59
    5.3.3.14
    GO:0005737 ... O33877 N/A
    775454 8b72:B (1.87) BS01 M25 4.2.1.59
    5.3.3.14
    GO:0005737 ... O33877 N/A
    775455 8b75:A (1.82) BS01 PJU 4.6.1.1 GO:0009190 ... Q96PN6 36346696
    775456 8b76:A (2.6) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775457 8b76:A (2.6) BS02 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775458 8b76:A (2.6) BS03 CA 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775459 8b76:A (2.6) BS04 CA 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775460 8b76:A (2.6) BS05 TTP 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775461 8b76:B (2.6) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775462 8b76:B (2.6) BS02 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775463 8b76:B (2.6) BS03 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775464 8b76:B (2.6) BS04 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775465 8b76:B (2.6) BS05 CA 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775466 8b76:B (2.6) BS06 CA 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775467 8b76:B (2.6) BS07 TTP 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775468 8b77:A (2.7) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775469 8b77:A (2.7) BS02 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775470 8b77:A (2.7) BS03 DTP 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775471 8b77:A (2.7) BS04 CA 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775472 8b78:A (1.11) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 37395055
    775473 8b78:A (1.11) BS02 PUO 3.6.5.2 GO:0003924 ... P01116 37395055
    775474 8b79:A (2.65) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775475 8b79:A (2.65) BS02 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775476 8b79:A (2.65) BS03 UTP 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775477 8b79:A (2.65) BS04 CA 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775478 8b79:A (2.65) BS05 CA 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775479 8b79:A (2.65) BS06 CA 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775480 8b79:B (2.65) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775481 8b79:B (2.65) BS02 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775482 8b79:B (2.65) BS03 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775483 8b79:B (2.65) BS04 UTP 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775484 8b79:B (2.65) BS05 CA 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775485 8b79:B (2.65) BS06 CA 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775486 8b79:B (2.65) BS07 CA 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775487 8b7a:A (2.25) BS01 GTP 3.6.5.- GO:0000226 ... P81947 36468686
    775488 8b7a:A (2.25) BS02 CA 3.6.5.- GO:0000226 ... P81947 36468686
    775489 8b7a:B (2.25) BS01 GDP ? GO:0000226 ... Q6B856 36468686
    775490 8b7a:C (2.25) BS01 GTP 3.6.5.- GO:0000226 ... P81947 36468686
    775491 8b7a:C (2.25) BS02 CA 3.6.5.- GO:0000226 ... P81947 36468686
    775492 8b7a:D (2.25) BS01 GDP ? GO:0000226 ... Q6B856 36468686
    775493 8b7a:D (2.25) BS02 Q0F ? GO:0000226 ... Q6B856 36468686
    775494 8b7a:F (2.25) BS01 ACP 6.3.2.25 GO:0000226 ... A0A8V0Z8P0 36468686
    775495 8b7b:A (2.25) BS01 GTP 3.6.5.- GO:0000226 ... P81947 36468686
    775496 8b7b:A (2.25) BS02 CA 3.6.5.- GO:0000226 ... P81947 36468686
    775497 8b7b:B (2.25) BS01 GDP ? GO:0000226 ... Q6B856 36468686
    775498 8b7b:C (2.25) BS01 GTP 3.6.5.- GO:0000226 ... P81947 36468686
    775499 8b7b:C (2.25) BS02 CA 3.6.5.- GO:0000226 ... P81947 36468686
    775500 8b7b:D (2.25) BS01 GDP ? GO:0000226 ... Q6B856 36468686
    775501 8b7b:D (2.25) BS02 PX0 ? GO:0000226 ... Q6B856 36468686
    775502 8b7b:F (2.25) BS01 ACP 6.3.2.25 GO:0000226 ... A0A8V0Z8P0 36468686
    775503 8b7c:A (1.9) BS01 GTP 3.6.5.- GO:0000226 ... P81947 36468686
    775504 8b7c:A (1.9) BS02 CA 3.6.5.- GO:0000226 ... P81947 36468686
    775505 8b7c:B (1.9) BS01 GDP ? GO:0000226 ... Q6B856 36468686
    775506 8b7c:C (1.9) BS01 GTP 3.6.5.- GO:0000226 ... P81947 36468686
    775507 8b7c:C (1.9) BS02 CA 3.6.5.- GO:0000226 ... P81947 36468686
    775508 8b7c:D (1.9) BS01 GDP ? GO:0000226 ... Q6B856 36468686
    775509 8b7c:D (1.9) BS02 PWC ? GO:0000226 ... Q6B856 36468686
    775510 8b7c:F (1.9) BS01 ACP 6.3.2.25 GO:0000226 ... A0A8V0Z8P0 36468686
    775511 8b7e:A (2.6) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775512 8b7e:A (2.6) BS02 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775513 8b7e:A (2.6) BS03 UTP 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775514 8b7e:A (2.6) BS04 CA 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775515 8b7e:B (2.6) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775516 8b7e:B (2.6) BS02 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775517 8b7e:B (2.6) BS03 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775518 8b7e:B (2.6) BS04 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775519 8b7e:B (2.6) BS05 UTP 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775520 8b7e:B (2.6) BS06 CA 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37819038
    775521 8b7l:AAA (1.24) BS01 AU ? GO:0005506 ... P02791 36430642
    775522 8b7o:AAA (1.17) BS01 MG 1.16.3.1 GO:0004322 ... P02794 36430642
    775523 8b7o:AAA (1.17) BS02 FE 1.16.3.1 GO:0004322 ... P02794 36430642
    775524 8b7o:AAA (1.17) BS03 AU 1.16.3.1 GO:0004322 ... P02794 36430642
    775525 8b7p:AAA (2.11) BS01 CU 3.2.1.4 GO:0005576 ... Q5AZ52 N/A
    775526 8b7p:BBB (2.11) BS01 CU 3.2.1.4 GO:0005576 ... Q5AZ52 N/A
    775527 8b7p:CCC (2.11) BS01 CU 3.2.1.4 GO:0005576 ... Q5AZ52 N/A
    775528 8b7p:DDD (2.11) BS01 CU 3.2.1.4 GO:0005576 ... Q5AZ52 N/A
    775529 8b7r:A (2.15) BS01 Q0X 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775530 8b7r:B (2.15) BS01 Q0X 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775531 8b7r:C (2.15) BS01 Q0X 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775532 8b7r:D (2.15) BS01 Q0X 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775533 8b7r:E (2.15) BS01 Q0X 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775534 8b7r:F (2.15) BS01 Q0X 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775535 8b7s:A (2.1) BS01 FAD N/A GO:0016491 ... A0A9X9ZA80 36353978
    775536 8b7u:A (2.8) BS01 DQH 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775537 8b7u:A (2.8) BS02 DQH 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775538 8b7u:B (2.8) BS01 DQH 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775539 8b7u:B (2.8) BS02 DQH 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775540 8b7u:B (2.8) BS03 DQH 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775541 8b7u:C (2.8) BS01 DQH 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775542 8b7u:C (2.8) BS02 DQH 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775543 8b7u:D (2.8) BS01 DQH 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775544 8b7u:D (2.8) BS02 DQH 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775545 8b7u:E (2.8) BS01 DQH 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775546 8b7u:E (2.8) BS02 DQH 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775547 8b7u:F (2.8) BS01 DQH 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775548 8b7u:F (2.8) BS02 DQH 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775549 8b7u:G (2.8) BS01 DQH 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775550 8b7u:G (2.8) BS02 DQH 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775551 8b7u:H (2.8) BS01 DQH 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775552 8b7u:H (2.8) BS02 DQH 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775553 8b7u:I (2.8) BS01 DQH 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775554 8b7u:I (2.8) BS02 DQH 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775555 8b7u:J (2.8) BS01 DQH 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775556 8b7u:K (2.8) BS01 DQH 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775557 8b7u:K (2.8) BS02 DQH 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775558 8b7u:L (2.8) BS01 DQH 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775559 8b7u:L (2.8) BS02 DQH 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775560 8b7u:M (2.8) BS01 DQH 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775561 8b7u:M (2.8) BS02 DQH 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775562 8b7u:N (2.8) BS01 DQH 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775563 8b7u:N (2.8) BS02 DQH 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775564 8b7u:O (2.8) BS01 DQH 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775565 8b7u:O (2.8) BS02 DQH 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775566 8b7u:P (2.8) BS01 DQH 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775567 8b7u:P (2.8) BS02 DQH 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775568 8b7u:Q (2.8) BS01 DQH 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775569 8b7u:Q (2.8) BS02 DQH 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775570 8b7u:R (2.8) BS01 DQH 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775571 8b7u:R (2.8) BS02 DQH 5.5.1.6 GO:0045430 ... V9P0A9 36432010
    775572 8b7x:A (1.42) BS01 JEF N/A GO:0006826 ... N/A 37428843
    775573 8b7y:5 (3.0) BS01 rna ? GO:0000028 ... P68679 36603206
    775574 8b7y:5 (3.0) BS02 MG ? GO:0000028 ... P68679 36603206
    775575 8b7y:D (3.0) BS01 rna ? GO:0000028 ... P0A7V0 36603206
    775576 8b7y:E (3.0) BS01 rna ? GO:0000028 ... P0A7V3 36603206
    775577 8b7y:F (3.0) BS01 rna ? GO:0000028 ... P0A7V8 36603206
    775578 8b7y:G (3.0) BS01 rna ? GO:0000028 ... P0A7W1 36603206
    775579 8b7y:H (3.0) BS01 rna ? GO:0002181 ... P02358 36603206
    775580 8b7y:K (3.0) BS01 rna ? GO:0000027 ... P60422 36603206
    775581 8b7y:K (3.0) BS02 rna ? GO:0000027 ... P60422 36603206
    775582 8b7y:L (3.0) BS01 rna ? GO:0000027 ... P60438 36603206
    775583 8b7y:M (3.0) BS01 rna ? GO:0001070 ... P60723 36603206
    775584 8b7y:N (3.0) BS01 rna ? GO:0000028 ... P02359 36603206
    775585 8b7y:O (3.0) BS01 rna ? GO:0000027 ... P0AG55 36603206
    775586 8b7y:P (3.0) BS01 rna ? GO:0000028 ... P0A7W7 36603206
    775587 8b7y:Q (3.0) BS01 rna ? GO:0002181 ... P0A7X3 36603206
    775588 8b7y:Q (3.0) BS02 rna ? GO:0002181 ... P0A7X3 36603206
    775589 8b7y:R (3.0) BS01 rna ? GO:0002181 ... P0AA10 36603206
    775590 8b7y:S (3.0) BS01 rna ? GO:0002181 ... P0ADY3 36603206
    775591 8b7y:S (3.0) BS02 rna ? GO:0002181 ... P0ADY3 36603206
    775592 8b7y:T (3.0) BS01 rna ? GO:0002181 ... P02413 36603206
    775593 8b7y:U (3.0) BS01 rna ? GO:0000027 ... P0ADY7 36603206
    775594 8b7y:U (3.0) BS02 rna ? GO:0000027 ... P0ADY7 36603206
    775595 8b7y:V (3.0) BS01 rna ? GO:0000027 ... P0AG44 36603206
    775596 8b7y:W (3.0) BS01 rna ? GO:0002181 ... P0C018 36603206
    775597 8b7y:W (3.0) BS02 rna ? GO:0002181 ... P0C018 36603206
    775598 8b7y:X (3.0) BS01 rna ? GO:0000027 ... P0A7K6 36603206
    775599 8b7y:X (3.0) BS02 rna ? GO:0000027 ... P0A7K6 36603206
    775600 8b7y:Y (3.0) BS01 rna ? GO:0000027 ... P0A7L3 36603206

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).