SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 3869 3870 3871 3872 3873 3874 3875 3876 3877 3878 3879 3880 3881 3882 3883 3884 3885 3886 3887 3888 3889 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    775601 8bq5:B (2.73) BS02 UQ9 7.1.1.2 GO:0005739 ... Q42577 36585502
    775602 8bq5:BB (2.73) BS01 peptide 3.4.24.64 GO:0000325 ... Q42290 36585502
    775603 8bq5:BB (2.73) BS02 ZN 3.4.24.64 GO:0000325 ... Q42290 36585502
    775604 8bq5:BC (2.73) BS01 HEM ? GO:0005739 ... P42792 36585502
    775605 8bq5:BC (2.73) BS02 HEM ? GO:0005739 ... P42792 36585502
    775606 8bq5:BC (2.73) BS03 UQ5 ? GO:0005739 ... P42792 36585502
    775607 8bq5:BC (2.73) BS04 UQ7 ? GO:0005739 ... P42792 36585502
    775608 8bq5:BD (2.73) BS01 peptide 7.1.1.8 GO:0005739 ... Q94JS0 36585502
    775609 8bq5:BD (2.73) BS02 FES 7.1.1.8 GO:0005739 ... Q94JS0 36585502
    775610 8bq5:BE (2.73) BS01 HEM ? GO:0005515 ... Q9FKS5 36585502
    775611 8bq5:BI (2.73) BS01 peptide ? GO:0005739 ... Q9LXJ2 36585502
    775612 8bq5:D (2.73) BS01 SF4 7.1.1.2 GO:0005739 ... P93306 36585502
    775613 8bq5:E (2.73) BS01 FES 7.1.1.2 GO:0005739 ... O22769 36585502
    775614 8bq5:F (2.73) BS01 FMN 7.1.1.2 GO:0005739 ... Q9FNN5 36585502
    775615 8bq5:F (2.73) BS02 SF4 7.1.1.2 GO:0005739 ... Q9FNN5 36585502
    775616 8bq5:G (2.73) BS01 FES 7.1.1.2 GO:0005739 ... Q9FGI6 36585502
    775617 8bq5:G (2.73) BS02 SF4 7.1.1.2 GO:0005739 ... Q9FGI6 36585502
    775618 8bq5:G (2.73) BS03 SF4 7.1.1.2 GO:0005739 ... Q9FGI6 36585502
    775619 8bq5:H (2.73) BS01 UQ9 7.1.1.2 GO:0003954 ... P92558 36585502
    775620 8bq5:I (2.73) BS01 SF4 7.1.1.2 GO:0005739 ... Q42599 36585502
    775621 8bq5:I (2.73) BS02 SF4 7.1.1.2 GO:0005739 ... Q42599 36585502
    775622 8bq5:O (2.73) BS01 FE ? GO:0005515 ... Q9SRR8 36585502
    775623 8bq5:O (2.73) BS02 COO ? GO:0005515 ... Q9SRR8 36585502
    775624 8bq5:P (2.73) BS01 NDP ? GO:0005739 ... Q9SK66 36585502
    775625 8bq5:R (2.73) BS01 ZN ? GO:0005739 ... Q9M9M6 36585502
    775626 8bq5:U (2.73) BS01 8Q1 ? GO:0000036 ... O80800 36585502
    775627 8bq5:W (2.73) BS01 8Q1 ? GO:0005739 ... Q9LHI0 36585502
    775628 8bq5:f (2.73) BS01 peptide ? GO:0005739 ... Q84W12 36585502
    775629 8bq5:n (2.73) BS01 8Q1 ? GO:0000325 ... Q945M1 36585502
    775630 8bq5:x (2.73) BS01 COO ? GO:0000325 ... Q9SMN1 36585502
    775631 8bq5:y (2.73) BS01 peptide 4.2.1.- GO:0004089 ... Q9C6B3 36585502
    775632 8bq5:y (2.73) BS02 COO 4.2.1.- GO:0004089 ... Q9C6B3 36585502
    775633 8bq5:y (2.73) BS03 ZN 4.2.1.- GO:0004089 ... Q9C6B3 36585502
    775634 8bq5:z (2.73) BS01 peptide 4.2.1.- GO:0004089 ... Q9FWR5 36585502
    775635 8bq6:A (2.8) BS01 UQ9 7.1.1.2 GO:0005739 ... P92533 36585502
    775636 8bq6:AB (2.8) BS01 peptide 3.4.24.64 GO:0000325 ... Q42290 36585502
    775637 8bq6:AB (2.8) BS02 ZN 3.4.24.64 GO:0000325 ... Q42290 36585502
    775638 8bq6:AC (2.8) BS01 HEM ? GO:0005739 ... P42792 36585502
    775639 8bq6:AC (2.8) BS02 HEM ? GO:0005739 ... P42792 36585502
    775640 8bq6:AC (2.8) BS03 UQ5 ? GO:0005739 ... P42792 36585502
    775641 8bq6:AC (2.8) BS04 UQ5 ? GO:0005739 ... P42792 36585502
    775642 8bq6:AD (2.8) BS01 peptide 7.1.1.8 GO:0005739 ... Q94JS0 36585502
    775643 8bq6:AD (2.8) BS02 FES 7.1.1.8 GO:0005739 ... Q94JS0 36585502
    775644 8bq6:AD (2.8) BS03 UQ7 7.1.1.8 GO:0005739 ... Q94JS0 36585502
    775645 8bq6:AE (2.8) BS01 HEM ? GO:0005515 ... Q9FKS5 36585502
    775646 8bq6:AI (2.8) BS01 peptide ? GO:0005739 ... Q9LXJ2 36585502
    775647 8bq6:B (2.8) BS01 SF4 7.1.1.2 GO:0005739 ... Q42577 36585502
    775648 8bq6:BB (2.8) BS01 ZN 3.4.24.64 GO:0000325 ... Q42290 36585502
    775649 8bq6:BC (2.8) BS01 HEM ? GO:0005739 ... P42792 36585502
    775650 8bq6:BC (2.8) BS02 HEM ? GO:0005739 ... P42792 36585502
    775651 8bq6:BC (2.8) BS03 UQ5 ? GO:0005739 ... P42792 36585502
    775652 8bq6:BC (2.8) BS04 UQ7 ? GO:0005739 ... P42792 36585502
    775653 8bq6:BD (2.8) BS01 peptide 7.1.1.8 GO:0005739 ... Q94JS0 36585502
    775654 8bq6:BD (2.8) BS02 FES 7.1.1.8 GO:0005739 ... Q94JS0 36585502
    775655 8bq6:BE (2.8) BS01 HEM ? GO:0005515 ... Q9FKS5 36585502
    775656 8bq6:BI (2.8) BS01 peptide ? GO:0005739 ... Q9LXJ2 36585502
    775657 8bq6:D (2.8) BS01 SF4 7.1.1.2 GO:0005739 ... P93306 36585502
    775658 8bq6:E (2.8) BS01 FES 7.1.1.2 GO:0005739 ... O22769 36585502
    775659 8bq6:F (2.8) BS01 FMN 7.1.1.2 GO:0005739 ... Q9FNN5 36585502
    775660 8bq6:F (2.8) BS02 SF4 7.1.1.2 GO:0005739 ... Q9FNN5 36585502
    775661 8bq6:G (2.8) BS01 FES 7.1.1.2 GO:0005739 ... Q9FGI6 36585502
    775662 8bq6:G (2.8) BS02 SF4 7.1.1.2 GO:0005739 ... Q9FGI6 36585502
    775663 8bq6:G (2.8) BS03 SF4 7.1.1.2 GO:0005739 ... Q9FGI6 36585502
    775664 8bq6:H (2.8) BS01 UQ9 7.1.1.2 GO:0005739 ... B5TM92 36585502
    775665 8bq6:I (2.8) BS01 SF4 7.1.1.2 GO:0005739 ... Q42599 36585502
    775666 8bq6:I (2.8) BS02 SF4 7.1.1.2 GO:0005739 ... Q42599 36585502
    775667 8bq6:O (2.8) BS01 FE ? GO:0051536 ... A0A384LA38 36585502
    775668 8bq6:P (2.8) BS01 NDP ? GO:0005739 ... Q9SK66 36585502
    775669 8bq6:R (2.8) BS01 ZN ? GO:0005739 ... Q9M9M6 36585502
    775670 8bq6:T (2.8) BS01 8Q1 ? GO:0000036 ... P53665 36585502
    775671 8bq6:U (2.8) BS01 8Q1 ? GO:0000036 ... O80800 36585502
    775672 8bq6:W (2.8) BS01 8Q1 ? GO:0005739 ... Q9LHI0 36585502
    775673 8bq6:f (2.8) BS01 peptide ? GO:0005739 ... Q84W12 36585502
    775674 8bq6:n (2.8) BS01 8Q1 ? GO:0000325 ... Q945M1 36585502
    775675 8bq6:x (2.8) BS01 COO ? GO:0000325 ... Q9SMN1 36585502
    775676 8bq6:y (2.8) BS01 peptide 4.2.1.- GO:0004089 ... Q9C6B3 36585502
    775677 8bq6:y (2.8) BS02 ZN 4.2.1.- GO:0004089 ... Q9C6B3 36585502
    775678 8bq6:y (2.8) BS03 COO 4.2.1.- GO:0004089 ... Q9C6B3 36585502
    775679 8bq6:z (2.8) BS01 peptide 4.2.1.- GO:0004089 ... Q9FWR5 36585502
    775680 8bq7:A (2.6) BS01 R4U 3.2.2.-
    4.2.99.18
    GO:0000702 ... O08760 N/A
    775681 8bq8:A (2.7) BS01 peptide ? N/A A0A369SI82 N/A
    775682 8bq8:B (2.7) BS01 peptide ? N/A A0A369SI82 N/A
    775683 8bq8:C (2.7) BS01 peptide ? N/A A0A369SI82 N/A
    775684 8bqa:AAA (1.67) BS01 RBH 3.2.1.4 GO:0000272 ... B3PCS3 38161374
    775685 8bqa:AAA (1.67) BS02 XYS 3.2.1.4 GO:0000272 ... B3PCS3 38161374
    775686 8bqa:AAA (1.67) BS03 YLL 3.2.1.4 GO:0000272 ... B3PCS3 38161374
    775687 8bqb:A (2.701) BS01 YLL 3.2.1.4 GO:0000272 ... B3PF55 38161374
    775688 8bqb:A (2.701) BS02 BGC 3.2.1.4 GO:0000272 ... B3PF55 38161374
    775689 8bqb:B (2.701) BS01 YLL 3.2.1.4 GO:0000272 ... B3PF55 38161374
    775690 8bqb:B (2.701) BS02 BGC 3.2.1.4 GO:0000272 ... B3PF55 38161374
    775691 8bqb:C (2.701) BS01 BGC 3.2.1.4 GO:0000272 ... B3PF55 38161374
    775692 8bqb:C (2.701) BS02 YLL 3.2.1.4 GO:0000272 ... B3PF55 38161374
    775693 8bqd:A (3.9) BS01 rna ? GO:0000054 ... P05750 37079644
    775694 8bqd:AA (3.9) BS01 rna ? GO:0000470 ... P17076 37079644
    775695 8bqd:AA (3.9) BS02 rna ? GO:0000470 ... P17076 37079644
    775696 8bqd:AB (3.9) BS01 rna ? GO:0002181 ... P0CX41 37079644
    775697 8bqd:AB (3.9) BS02 rna ? GO:0002181 ... P0CX41 37079644
    775698 8bqd:AC (3.9) BS01 rna ? GO:0002181 ... P05745 37079644
    775699 8bqd:AD (3.9) BS01 rna ? GO:0002181 ... P05738 37079644
    775700 8bqd:AE (3.9) BS01 rna ? GO:0003735 ... P04449 37079644
    775701 8bqd:AE (3.9) BS02 rna ? GO:0003735 ... P04449 37079644
    775702 8bqd:AF (3.9) BS01 rna ? GO:0000448 ... P49166 37079644
    775703 8bqd:AF (3.9) BS02 rna ? GO:0000448 ... P49166 37079644
    775704 8bqd:AF (3.9) BS03 ZN ? GO:0000448 ... P49166 37079644
    775705 8bqd:AG (3.9) BS01 rna ? GO:0000027 ... P0C0W9 37079644
    775706 8bqd:AG (3.9) BS02 rna ? GO:0000027 ... P0C0W9 37079644
    775707 8bqd:AH (3.9) BS01 rna ? GO:0003735 ... P04456 37079644
    775708 8bqd:AH (3.9) BS02 rna ? GO:0003735 ... P04456 37079644
    775709 8bqd:AI (3.9) BS01 rna ? GO:0002181 ... P49167 37079644
    775710 8bqd:AJ (3.9) BS01 rna ? GO:0002181 ... Q12690 37079644
    775711 8bqd:AJ (3.9) BS02 rna ? GO:0002181 ... Q12690 37079644
    775712 8bqd:AK (3.9) BS01 rna ? GO:0002181 ... P05743 37079644
    775713 8bqd:AK (3.9) BS02 rna ? GO:0002181 ... P05743 37079644
    775714 8bqd:AL (3.9) BS01 rna ? GO:0002181 ... P04650 37079644
    775715 8bqd:AL (3.9) BS02 rna ? GO:0002181 ... P04650 37079644
    775716 8bqd:AM (3.9) BS01 rna ? GO:0000027 ... P36105 37079644
    775717 8bqd:AN (3.9) BS01 rna ? GO:0002181 ... P0C2H6 37079644
    775718 8bqd:AO (3.9) BS01 rna ? GO:0003735 ... P0CH08 37079644
    775719 8bqd:AO (3.9) BS02 ZN ? GO:0003735 ... P0CH08 37079644
    775720 8bqd:AP (3.9) BS01 rna ? GO:0002181 ... P0CX27 37079644
    775721 8bqd:AP (3.9) BS02 ZN ? GO:0002181 ... P0CX27 37079644
    775722 8bqd:AQ (3.9) BS01 rna ? GO:0002181 ... P05748 37079644
    775723 8bqd:AQ (3.9) BS02 rna ? GO:0002181 ... P05748 37079644
    775724 8bqd:AR (3.9) BS01 rna ? GO:0002181 ... P02406 37079644
    775725 8bqd:AT (3.9) BS01 rna ? GO:0002181 ... P0CX25 37079644
    775726 8bqd:AT (3.9) BS02 ZN ? GO:0002181 ... P0CX25 37079644
    775727 8bqd:AU (3.9) BS01 rna ? GO:0000470 ... P26784 37079644
    775728 8bqd:AV (3.9) BS01 rna ? GO:0002181 ... P05747 37079644
    775729 8bqd:AW (3.9) BS01 rna ? GO:0002181 ... P0CX45 37079644
    775730 8bqd:AX (3.9) BS01 rna ? GO:0000448 ... P05740 37079644
    775731 8bqd:AX (3.9) BS02 rna ? GO:0000448 ... P05740 37079644
    775732 8bqd:AY (3.9) BS01 rna ? GO:0002181 ... P14120 37079644
    775733 8bqd:B (3.9) BS01 rna ? GO:0000028 ... P26783 37079644
    775734 8bqd:BA (3.9) BS01 rna ? GO:0000027 ... P14126 37079644
    775735 8bqd:BB (3.9) BS01 rna ? GO:0002181 ... P0CX49 37079644
    775736 8bqd:BC (3.9) BS01 rna ? GO:0002181 ... P0C2H8 37079644
    775737 8bqd:BD (3.9) BS01 rna ? GO:0000027 ... P41805 37079644
    775738 8bqd:BD (3.9) BS02 rna ? GO:0000027 ... P41805 37079644
    775739 8bqd:BE (3.9) BS01 rna ? GO:0002181 ... P10664 37079644
    775740 8bqd:BE (3.9) BS02 rna ? GO:0002181 ... P10664 37079644
    775741 8bqd:BF (3.9) BS01 rna ? GO:0002181 ... P0CX82 37079644
    775742 8bqd:BF (3.9) BS02 rna ? GO:0002181 ... P0CX82 37079644
    775743 8bqd:BG (3.9) BS01 rna ? GO:0002181 ... P38061 37079644
    775744 8bqd:BH (3.9) BS01 rna ? GO:0002181 ... P0CX23 37079644
    775745 8bqd:BH (3.9) BS02 rna ? GO:0002181 ... P0CX23 37079644
    775746 8bqd:BI (3.9) BS01 rna ? GO:0000027 ... P26321 37079644
    775747 8bqd:BI (3.9) BS02 rna ? GO:0000027 ... P26321 37079644
    775748 8bqd:BJ (3.9) BS01 rna ? GO:0002181 ... Q02753 37079644
    775749 8bqd:BJ (3.9) BS02 rna ? GO:0002181 ... Q02753 37079644
    775750 8bqd:BK (3.9) BS01 rna ? GO:0000027 ... P05744 37079644
    775751 8bqd:BL (3.9) BS01 rna ? GO:0003735 ... P05749 37079644
    775752 8bqd:BM (3.9) BS01 rna ? GO:0000027 ... P05739 37079644
    775753 8bqd:BN (3.9) BS01 rna ? GO:0002181 ... P87262 37079644
    775754 8bqd:BN (3.9) BS02 ZN ? GO:0002181 ... P87262 37079644
    775755 8bqd:BO (3.9) BS01 rna ? GO:0000463 ... P05737 37079644
    775756 8bqd:BO (3.9) BS02 rna ? GO:0000463 ... P05737 37079644
    775757 8bqd:BP (3.9) BS01 rna ? GO:0000463 ... P0CX84 37079644
    775758 8bqd:BP (3.9) BS02 rna ? GO:0000463 ... P0CX84 37079644
    775759 8bqd:BT (3.9) BS01 rna ? GO:0000055 ... P0CX43 37079644
    775760 8bqd:C (3.9) BS01 rna ? N/A Q08745 37079644
    775761 8bqd:D (3.9) BS01 rna ? GO:0003735 ... P48589 37079644
    775762 8bqd:E (3.9) BS01 rna ? GO:0000028 ... Q01855 37079644
    775763 8bqd:F (3.9) BS01 rna ? GO:0000462 ... P0CX51 37079644
    775764 8bqd:G (3.9) BS01 rna ? GO:0000028 ... P02407 37079644
    775765 8bqd:H (3.9) BS01 rna ? GO:0000054 ... P0CX55 37079644
    775766 8bqd:I (3.9) BS01 rna ? GO:0000028 ... P07280 37079644
    775767 8bqd:J (3.9) BS01 rna ? GO:0003723 ... P38701 37079644
    775768 8bqd:K (3.9) BS01 rna ? N/A Q3E792 37079644
    775769 8bqd:L (3.9) BS01 rna ? GO:0000028 ... Q3E7X9 37079644
    775770 8bqd:M (3.9) BS01 rna ? GO:0002181 ... P41057 37079644
    775771 8bqd:M (3.9) BS02 ZN ? GO:0002181 ... P41057 37079644
    775772 8bqd:N (3.9) BS01 rna ? GO:0003735 ... P05759 37079644
    775773 8bqd:N (3.9) BS02 ZN ? GO:0003735 ... P05759 37079644
    775774 8bqd:O (3.9) BS01 rna ? GO:0001965 ... P38011 37079644
    775775 8bqd:P (3.9) BS01 rna ? GO:0003735 ... P32905 37079644
    775776 8bqd:Q (3.9) BS01 rna ? GO:0000462 ... P33442 37079644
    775777 8bqd:R (3.9) BS01 rna ? GO:0003723 ... P25443 37079644
    775778 8bqd:S (3.9) BS01 rna ? GO:0002181 ... P0CX35 37079644
    775779 8bqd:T (3.9) BS01 rna ? GO:0000462 ... P0CX37 37079644
    775780 8bqd:U (3.9) BS01 rna ? GO:0002181 ... P26786 37079644
    775781 8bqd:V (3.9) BS01 rna ? GO:0000462 ... P0CX39 37079644
    775782 8bqd:V (3.9) BS02 rna ? GO:0000462 ... P0CX39 37079644
    775783 8bqd:W (3.9) BS01 rna ? GO:0000462 ... O13516 37079644
    775784 8bqd:X (3.9) BS01 rna ? GO:0000028 ... P0CX47 37079644
    775785 8bqd:Y (3.9) BS01 rna ? GO:0000462 ... P05756 37079644
    775786 8bqd:Y (3.9) BS02 rna ? GO:0000462 ... P05756 37079644
    775787 8bqd:Z (3.9) BS01 rna ? GO:0000028 ... P39516 37079644
    775788 8bqd:a (3.9) BS01 rna ? GO:0000447 ... P0C0V8 37079644
    775789 8bqd:b (3.9) BS01 rna ? GO:0002181 ... P0C0W1 37079644
    775790 8bqd:c (3.9) BS01 rna ? GO:0000462 ... P0CX29 37079644
    775791 8bqd:d (3.9) BS01 rna ? GO:0000462 ... P0CX31 37079644
    775792 8bqd:e (3.9) BS01 rna ? GO:0003735 ... P39939 37079644
    775793 8bqd:f (3.9) BS01 rna ? GO:0000028 ... P35997 37079644
    775794 8bqd:g (3.9) BS01 rna ? GO:0002181 ... P0CX33 37079644
    775795 8bqd:x (3.9) BS01 rna 3.4.11.18 GO:0003729 ... Q01662 37079644
    775796 8bqe:A (3.5) BS01 MRH ? GO:0005509 ... A0A0H3C8J1 36468689
    775797 8bqe:A (3.5) BS02 MRH ? GO:0005509 ... A0A0H3C8J1 36468689
    775798 8bqe:A (3.5) BS03 MRH ? GO:0005509 ... A0A0H3C8J1 36468689
    775799 8bqe:A (3.5) BS04 MRH ? GO:0005509 ... A0A0H3C8J1 36468689
    775800 8bqe:A (3.5) BS05 MRH ? GO:0005509 ... A0A0H3C8J1 36468689

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).