SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    776201 8br8:Lb (3.35) BS01 rna ? GO:0003735 ... A8BZ78 36912103
    776202 8br8:Lc (3.35) BS01 rna ? GO:0002181 ... A8BYY2 36912103
    776203 8br8:Ld (3.35) BS01 rna ? GO:0003723 ... A8B5N7 36912103
    776204 8br8:Le (3.35) BS01 rna ? GO:0002181 ... A8BMP3 36912103
    776205 8br8:Lf (3.35) BS01 rna ? GO:0003735 ... A8BMD9 36912103
    776206 8br8:Lg (3.35) BS01 rna ? GO:0002181 ... A8BKK5 36912103
    776207 8br8:Lh (3.35) BS01 rna ? GO:0003735 ... A8BMF7 36912103
    776208 8br8:Li (3.35) BS01 rna ? GO:0000463 ... A0A644FBK5 36912103
    776209 8br8:Li (3.35) BS02 rna ? GO:0000463 ... A0A644FBK5 36912103
    776210 8br8:Lj (3.35) BS01 rna ? GO:0002181 ... A8BYA6 36912103
    776211 8br8:Lk (3.35) BS01 rna ? GO:0003723 ... A8BLV7 36912103
    776212 8br8:Lk (3.35) BS02 rna ? GO:0003723 ... A8BLV7 36912103
    776213 8br8:Ll (3.35) BS01 rna ? GO:0003735 ... A8B481 36912103
    776214 8br8:Ln (3.35) BS01 rna ? GO:0003723 ... A0A644FB74 36912103
    776215 8br8:Lp (3.35) BS01 rna ? GO:0003735 ... A8BQU8 36912103
    776216 8br8:Lp (3.35) BS02 rna ? GO:0003735 ... A8BQU8 36912103
    776217 8br8:Lq (3.35) BS01 rna ? GO:0003735 ... A8BN26 36912103
    776218 8br8:Lq (3.35) BS02 rna ? GO:0003735 ... A8BN26 36912103
    776219 8br8:Ls (3.35) BS01 rna ? GO:0003735 ... A8BXE1 36912103
    776220 8br8:SA (3.35) BS01 rna ? GO:0000028 ... A8BE86 36912103
    776221 8br8:SB (3.35) BS01 rna ? GO:0003723 ... A8BMZ1 36912103
    776222 8br8:SC (3.35) BS01 rna ? GO:0003723 ... A8B8Z2 36912103
    776223 8br8:SD (3.35) BS01 rna ? GO:0003735 ... A8BS79 36912103
    776224 8br8:SD (3.35) BS02 rna ? GO:0003735 ... A8BS79 36912103
    776225 8br8:SE (3.35) BS01 rna ? GO:0003723 ... A8BFE3 36912103
    776226 8br8:SF (3.35) BS01 rna ? GO:0000028 ... A8BZD3 36912103
    776227 8br8:SG (3.35) BS01 rna ? GO:0003735 ... A8B6L8 36912103
    776228 8br8:SH (3.35) BS01 rna ? GO:0003735 ... A8BT38 36912103
    776229 8br8:SI (3.35) BS01 rna ? GO:0000462 ... A8B252 36912103
    776230 8br8:SI (3.35) BS02 rna ? GO:0000462 ... A8B252 36912103
    776231 8br8:SJ (3.35) BS01 rna ? GO:0003735 ... E2RU77 36912103
    776232 8br8:SK (3.35) BS01 rna ? GO:0003723 ... A8BKS8 36912103
    776233 8br8:SL (3.35) BS01 rna ? GO:0003723 ... A8BRX3 36912103
    776234 8br8:SM (3.35) BS01 rna ? GO:0003735 ... A8BVU0 36912103
    776235 8br8:SO (3.35) BS01 rna ? GO:0003735 ... A8BS96 36912103
    776236 8br8:SP (3.35) BS01 rna ? GO:0003735 ... A8BE02 36912103
    776237 8br8:SP (3.35) BS02 rna ? GO:0003735 ... A8BE02 36912103
    776238 8br8:SQ (3.35) BS01 rna ? GO:0000028 ... E2RU83 36912103
    776239 8br8:SR (3.35) BS01 rna ? GO:0000028 ... A8BBP3 36912103
    776240 8br8:ST (3.35) BS01 rna ? GO:0000462 ... A8BKC6 36912103
    776241 8br8:SU (3.35) BS01 rna ? GO:0003735 ... A8BRG5 36912103
    776242 8br8:SV (3.35) BS01 rna ? GO:0003676 ... A8BZ58 36912103
    776243 8br8:SW (3.35) BS01 rna ? GO:0000028 ... A0A644F964 36912103
    776244 8br8:SX (3.35) BS01 rna ? GO:0003735 ... A8B4G0 36912103
    776245 8br8:Sb (3.35) BS01 rna ? GO:0003735 ... A8B593 36912103
    776246 8br8:Sc (3.35) BS01 rna ? GO:0003735 ... A8B8H7 36912103
    776247 8br8:Sd (3.35) BS01 rna ? GO:0003729 ... A8BQZ7 36912103
    776248 8br8:Se (3.35) BS01 rna ? GO:0000028 ... A0A644F5K9 36912103
    776249 8br8:Sg (3.35) BS01 rna ? GO:0000028 ... A8B4F3 36912103
    776250 8br8:Sh (3.35) BS01 rna ? GO:0002181 ... A0A644FA19 36912103
    776251 8br8:Sj (3.35) BS01 rna ? GO:0003735 ... A0A644F843 36912103
    776252 8br9:A (1.63) BS01 peptide ? GO:0003677 ... O74036 38075664
    776253 8br9:A (1.63) BS02 ADP ? GO:0003677 ... O74036 38075664
    776254 8bra:B (1.7) BS01 UB7 N/A N/A N/A 37019924
    776255 8brb:A (1.7) BS01 UB7 N/A N/A N/A 37019924
    776256 8brb:B (1.7) BS01 UB7 N/A N/A N/A 37019924
    776257 8brc:A (3.17) BS01 FE ? GO:0005515 ... P02787 36602395
    776258 8brd:B (2.48) BS01 NA ? GO:0005515 ... O06873 37500658
    776259 8brd:E (2.48) BS01 NA ? GO:0005515 ... O06873 37500658
    776260 8brd:G (2.48) BS01 NA ? N/A A0A7Y4B4T7 37500658
    776261 8brh:A (2.4) BS01 peptide ? GO:0005737 ... Q6CMY7 39054317
    776262 8brk:A (1.75) BS01 HEC ? N/A Q746G4 37199504
    776263 8brl:D (1.88) BS01 HEC ? GO:0005506 ... F7J213 37199504
    776264 8brm:LA (3.33) BS01 rna ? GO:0002181 ... E2RTN4 36912103
    776265 8brm:LA (3.33) BS02 rna ? GO:0002181 ... E2RTN4 36912103
    776266 8brm:LB (3.33) BS01 rna ? GO:0003723 ... A8BRZ3 36912103
    776267 8brm:LC (3.33) BS01 rna ? GO:0003723 ... A8B7H8 36912103
    776268 8brm:LC (3.33) BS02 rna ? GO:0003723 ... A8B7H8 36912103
    776269 8brm:LF (3.33) BS01 rna ? GO:0000027 ... E2RU47 36912103
    776270 8brm:LF (3.33) BS02 rna ? GO:0000027 ... E2RU47 36912103
    776271 8brm:LG (3.33) BS01 rna ? GO:0003735 ... A0A644EZB9 36912103
    776272 8brm:LG (3.33) BS02 rna ? GO:0003735 ... A0A644EZB9 36912103
    776273 8brm:LH (3.33) BS01 rna ? GO:0000463 ... A8BRY6 36912103
    776274 8brm:LH (3.33) BS02 rna ? GO:0000463 ... A8BRY6 36912103
    776275 8brm:LI (3.33) BS01 rna ? GO:0000470 ... A8BLL7 36912103
    776276 8brm:LI (3.33) BS02 rna ? GO:0000470 ... A8BLL7 36912103
    776277 8brm:LJ (3.33) BS01 rna ? GO:0002181 ... A8BNT5 36912103
    776278 8brm:LK (3.33) BS01 rna ? GO:0003735 ... A8BM86 36912103
    776279 8brm:LK (3.33) BS02 rna ? GO:0003735 ... A8BM86 36912103
    776280 8brm:LL (3.33) BS01 rna ? GO:0003723 ... A8BI95 36912103
    776281 8brm:LL (3.33) BS02 rna ? GO:0003723 ... A8BI95 36912103
    776282 8brm:LM (3.33) BS01 rna ? GO:0003735 ... N/A 36912103
    776283 8brm:LM (3.33) BS02 rna ? GO:0003735 ... N/A 36912103
    776284 8brm:LN (3.33) BS01 rna ? GO:0003723 ... A8B4F8 36912103
    776285 8brm:LO (3.33) BS01 rna ? GO:0002181 ... A8B8Z6 36912103
    776286 8brm:LO (3.33) BS02 rna ? GO:0002181 ... A8B8Z6 36912103
    776287 8brm:LP (3.33) BS01 rna ? GO:0003729 ... A8BU75 36912103
    776288 8brm:LQ (3.33) BS01 rna ? GO:0002181 ... A8BE76 36912103
    776289 8brm:LQ (3.33) BS02 rna ? GO:0002181 ... A8BE76 36912103
    776290 8brm:LR (3.33) BS01 rna ? GO:0003723 ... A8B4T7 36912103
    776291 8brm:LS (3.33) BS01 rna ? GO:0003723 ... A8BH61 36912103
    776292 8brm:LS (3.33) BS02 rna ? GO:0003723 ... A8BH61 36912103
    776293 8brm:LT (3.33) BS01 rna ? GO:0002181 ... A0A644FBU1 36912103
    776294 8brm:LT (3.33) BS02 rna ? GO:0002181 ... A0A644FBU1 36912103
    776295 8brm:LU (3.33) BS01 rna ? GO:0003735 ... A8B2Q4 36912103
    776296 8brm:LU (3.33) BS02 rna ? GO:0003735 ... A8B2Q4 36912103
    776297 8brm:LV (3.33) BS01 rna ? GO:0002181 ... A0A644FC41 36912103
    776298 8brm:LW (3.33) BS01 rna ? GO:0003735 ... A8BS37 36912103
    776299 8brm:LX (3.33) BS01 rna ? GO:0003735 ... A8B7P2 36912103
    776300 8brm:LY (3.33) BS01 rna ? GO:0003735 ... A8BMP6 36912103
    776301 8brm:LY (3.33) BS02 rna ? GO:0003735 ... A8BMP6 36912103
    776302 8brm:LZ (3.33) BS01 rna ? GO:0002181 ... A8BFT3 36912103
    776303 8brm:LZ (3.33) BS02 rna ? GO:0002181 ... A8BFT3 36912103
    776304 8brm:La (3.33) BS01 rna ? GO:0003735 ... A8B1T3 36912103
    776305 8brm:Lb (3.33) BS01 rna ? GO:0003735 ... A8BZ78 36912103
    776306 8brm:Lc (3.33) BS01 rna ? GO:0002181 ... A8BYY2 36912103
    776307 8brm:Ld (3.33) BS01 rna ? GO:0003723 ... A8B5N7 36912103
    776308 8brm:Le (3.33) BS01 rna ? GO:0002181 ... A8BMP3 36912103
    776309 8brm:Lf (3.33) BS01 rna ? GO:0003735 ... A8BMD9 36912103
    776310 8brm:Lg (3.33) BS01 rna ? GO:0002181 ... A8BKK5 36912103
    776311 8brm:Lh (3.33) BS01 rna ? GO:0003735 ... A8BMF7 36912103
    776312 8brm:Li (3.33) BS01 rna ? GO:0000463 ... A0A644FBK5 36912103
    776313 8brm:Li (3.33) BS02 rna ? GO:0000463 ... A0A644FBK5 36912103
    776314 8brm:Lj (3.33) BS01 rna ? GO:0002181 ... A8BYA6 36912103
    776315 8brm:Lk (3.33) BS01 rna ? GO:0003723 ... A8BLV7 36912103
    776316 8brm:Lk (3.33) BS02 rna ? GO:0003723 ... A8BLV7 36912103
    776317 8brm:Ll (3.33) BS01 rna ? GO:0003735 ... A8B481 36912103
    776318 8brm:Ln (3.33) BS01 rna ? GO:0003723 ... A0A644FB74 36912103
    776319 8brm:Lp (3.33) BS01 rna ? GO:0003735 ... A8BQU8 36912103
    776320 8brm:Lq (3.33) BS01 rna ? GO:0003735 ... A8BN26 36912103
    776321 8brm:Ls (3.33) BS01 rna ? GO:0003735 ... A8BXE1 36912103
    776322 8brm:SA (3.33) BS01 rna ? GO:0000028 ... A8BE86 36912103
    776323 8brm:SB (3.33) BS01 rna ? GO:0003723 ... A8BMZ1 36912103
    776324 8brm:SC (3.33) BS01 rna ? GO:0003723 ... A8B8Z2 36912103
    776325 8brm:SD (3.33) BS01 rna ? GO:0003735 ... A8BS79 36912103
    776326 8brm:SE (3.33) BS01 rna ? GO:0003723 ... A8BFE3 36912103
    776327 8brm:SF (3.33) BS01 rna ? GO:0000028 ... A8BZD3 36912103
    776328 8brm:SG (3.33) BS01 rna ? GO:0003735 ... A8B6L8 36912103
    776329 8brm:SH (3.33) BS01 rna ? GO:0003735 ... A8BT38 36912103
    776330 8brm:SI (3.33) BS01 rna ? GO:0000462 ... A8B252 36912103
    776331 8brm:SI (3.33) BS02 rna ? GO:0000462 ... A8B252 36912103
    776332 8brm:SJ (3.33) BS01 rna ? GO:0003735 ... E2RU77 36912103
    776333 8brm:SK (3.33) BS01 rna ? GO:0003723 ... A8BKS8 36912103
    776334 8brm:SL (3.33) BS01 rna ? GO:0003723 ... A8BRX3 36912103
    776335 8brm:SM (3.33) BS01 rna ? GO:0003735 ... A8BVU0 36912103
    776336 8brm:SO (3.33) BS01 rna ? GO:0003735 ... A8BS96 36912103
    776337 8brm:SP (3.33) BS01 rna ? GO:0003735 ... A8BE02 36912103
    776338 8brm:SQ (3.33) BS01 rna ? GO:0000028 ... E2RU83 36912103
    776339 8brm:SR (3.33) BS01 rna ? GO:0000028 ... A8BBP3 36912103
    776340 8brm:ST (3.33) BS01 rna ? GO:0000462 ... A8BKC6 36912103
    776341 8brm:SU (3.33) BS01 rna ? GO:0003735 ... A8BRG5 36912103
    776342 8brm:SV (3.33) BS01 rna ? GO:0003676 ... A8BZ58 36912103
    776343 8brm:SV (3.33) BS02 rna ? GO:0003676 ... A8BZ58 36912103
    776344 8brm:SW (3.33) BS01 rna ? GO:0000028 ... A0A644F964 36912103
    776345 8brm:SX (3.33) BS01 rna ? GO:0003735 ... A8B4G0 36912103
    776346 8brm:Sb (3.33) BS01 rna ? GO:0003735 ... A8B593 36912103
    776347 8brm:Sc (3.33) BS01 rna ? GO:0003735 ... A8B8H7 36912103
    776348 8brm:Sd (3.33) BS01 rna ? GO:0003729 ... A8BQZ7 36912103
    776349 8brm:Se (3.33) BS01 rna ? GO:0000028 ... A0A644F5K9 36912103
    776350 8brm:Sg (3.33) BS01 rna ? GO:0000028 ... A8B4F3 36912103
    776351 8brm:Sh (3.33) BS01 rna ? GO:0002181 ... A0A644FA19 36912103
    776352 8brm:Sj (3.33) BS01 rna ? GO:0003735 ... A0A644F843 36912103
    776353 8brn:A (2.0) BS01 ZN 3.1.3.2 GO:0003993 ... P80366 37087894
    776354 8brn:A (2.0) BS02 FE 3.1.3.2 GO:0003993 ... P80366 37087894
    776355 8brn:A (2.0) BS03 R9X 3.1.3.2 GO:0003993 ... P80366 37087894
    776356 8brn:A (2.0) BS04 R9X 3.1.3.2 GO:0003993 ... P80366 37087894
    776357 8brn:B (2.0) BS01 ZN 3.1.3.2 GO:0003993 ... P80366 37087894
    776358 8brn:B (2.0) BS02 FE 3.1.3.2 GO:0003993 ... P80366 37087894
    776359 8brn:B (2.0) BS03 R9X 3.1.3.2 GO:0003993 ... P80366 37087894
    776360 8brn:C (2.0) BS01 ZN 3.1.3.2 GO:0003993 ... P80366 37087894
    776361 8brn:C (2.0) BS02 FE 3.1.3.2 GO:0003993 ... P80366 37087894
    776362 8brn:C (2.0) BS03 R9X 3.1.3.2 GO:0003993 ... P80366 37087894
    776363 8brn:C (2.0) BS04 R9X 3.1.3.2 GO:0003993 ... P80366 37087894
    776364 8brn:D (2.0) BS01 ZN 3.1.3.2 GO:0003993 ... P80366 37087894
    776365 8brn:D (2.0) BS02 FE 3.1.3.2 GO:0003993 ... P80366 37087894
    776366 8brn:D (2.0) BS03 R9X 3.1.3.2 GO:0003993 ... P80366 37087894
    776367 8bro:A (1.55) BS01 R7E ? N/A B4EH86 36771163
    776368 8brp:A (2.6) BS01 MN ? GO:0046872 ... D8G6F7 36791048
    776369 8brp:A (2.6) BS02 MN ? GO:0046872 ... D8G6F7 36791048
    776370 8brp:B (2.6) BS01 MN ? GO:0046872 ... D8G6F7 36791048
    776371 8brp:B (2.6) BS02 MN ? GO:0046872 ... D8G6F7 36791048
    776372 8brp:C (2.6) BS01 MN ? GO:0046872 ... D8G6F7 36791048
    776373 8brp:C (2.6) BS02 MN ? GO:0046872 ... D8G6F7 36791048
    776374 8brp:D (2.6) BS01 MN ? GO:0046872 ... D8G6F7 36791048
    776375 8brp:D (2.6) BS02 MN ? GO:0046872 ... D8G6F7 36791048
    776376 8brq:B (1.63) BS01 BU3 ? GO:0016787 ... A0A0K9H482 N/A
    776377 8brq:B (1.63) BS02 BU3 ? GO:0016787 ... A0A0K9H482 N/A
    776378 8brq:B (1.63) BS03 CA ? GO:0016787 ... A0A0K9H482 N/A
    776379 8brq:B (1.63) BS04 CA ? GO:0016787 ... A0A0K9H482 N/A
    776380 8brr:B (1.95) BS01 BU3 ? GO:0016787 ... A0A0K9H482 N/A
    776381 8brr:B (1.95) BS02 CA ? GO:0016787 ... A0A0K9H482 N/A
    776382 8brr:B (1.95) BS03 CA ? GO:0016787 ... A0A0K9H482 N/A
    776383 8brr:D (1.95) BS01 BU3 ? GO:0016787 ... A0A0K9H482 N/A
    776384 8brr:D (1.95) BS02 CA ? GO:0016787 ... A0A0K9H482 N/A
    776385 8brr:D (1.95) BS03 CA ? GO:0016787 ... A0A0K9H482 N/A
    776386 8brs:B (1.2) BS01 BU3 ? GO:0016787 ... A0A0K9H482 N/A
    776387 8brs:B (1.2) BS02 BU3 ? GO:0016787 ... A0A0K9H482 N/A
    776388 8brs:B (1.2) BS03 BU3 ? GO:0016787 ... A0A0K9H482 N/A
    776389 8brs:B (1.2) BS04 CA ? GO:0016787 ... A0A0K9H482 N/A
    776390 8brs:B (1.2) BS05 CA ? GO:0016787 ... A0A0K9H482 N/A
    776391 8brt:B (1.31) BS01 BU3 ? GO:0016787 ... A0A0K9H482 N/A
    776392 8brt:B (1.31) BS02 BU3 ? GO:0016787 ... A0A0K9H482 N/A
    776393 8brt:B (1.31) BS03 CA ? GO:0016787 ... A0A0K9H482 N/A
    776394 8brt:B (1.31) BS04 CA ? GO:0016787 ... A0A0K9H482 N/A
    776395 8bru:A (1.55) BS01 ZN 6.1.1.10 GO:0000166 ... P00959 37518893
    776396 8brv:A (1.53) BS01 ZN 6.1.1.10 GO:0000166 ... P00959 37518893
    776397 8brv:A (1.53) BS02 B3M 6.1.1.10 GO:0000166 ... P00959 37518893
    776398 8brw:A (1.73) BS01 ZN 6.1.1.10 GO:0000166 ... P00959 37518893
    776399 8brx:A (1.54) BS01 ZN 6.1.1.10 GO:0000166 ... P00959 37518893
    776400 8brx:A (1.54) BS02 B3M 6.1.1.10 GO:0000166 ... P00959 37518893

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).