SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    776401 8bs3:A (2.2) BS01 ZN 2.3.2.-
    3.4.19.12
    GO:0004843 ... Q9P275 37443395
    776402 8bs3:A (2.2) BS02 ZN 2.3.2.-
    3.4.19.12
    GO:0004843 ... Q9P275 37443395
    776403 8bs3:A (2.2) BS03 AYE 2.3.2.-
    3.4.19.12
    GO:0004843 ... Q9P275 37443395
    776404 8bs9:A (1.9) BS01 ZN 2.3.2.-
    3.4.19.12
    GO:0004843 ... Q9P275 37443395
    776405 8bs9:A (1.9) BS02 ZN 2.3.2.-
    3.4.19.12
    GO:0004843 ... Q9P275 37443395
    776406 8bs9:A (1.9) BS03 AYE 2.3.2.-
    3.4.19.12
    GO:0004843 ... Q9P275 37443395
    776407 8bs9:C (1.9) BS01 ZN 2.3.2.-
    3.4.19.12
    GO:0004843 ... Q9P275 37443395
    776408 8bs9:C (1.9) BS02 ZN 2.3.2.-
    3.4.19.12
    GO:0004843 ... Q9P275 37443395
    776409 8bs9:C (1.9) BS03 AYE 2.3.2.-
    3.4.19.12
    GO:0004843 ... Q9P275 37443395
    776410 8bsa:A (1.9) BS01 DAR ? N/A Q9KSE4 37365341
    776411 8bsa:B (1.9) BS01 DAR ? N/A Q9KSE4 37365341
    776412 8bsb:A (1.9) BS01 DLY ? N/A Q9KSE4 37365341
    776413 8bsb:B (1.9) BS01 DLY ? N/A Q9KSE4 37365341
    776414 8bsc:A (3.6) BS01 CA ? GO:0000150 ... Q06609 37216117
    776415 8bsc:A (3.6) BS02 ADP ? GO:0000150 ... Q06609 37216117
    776416 8bsc:B (3.6) BS01 CA ? GO:0000150 ... Q06609 37216117
    776417 8bsc:B (3.6) BS02 ADP ? GO:0000150 ... Q06609 37216117
    776418 8bsc:C (3.6) BS01 CA ? GO:0000150 ... Q06609 37216117
    776419 8bsc:C (3.6) BS02 ADP ? GO:0000150 ... Q06609 37216117
    776420 8bsc:D (3.6) BS01 CA ? GO:0000150 ... Q06609 37216117
    776421 8bsc:D (3.6) BS02 ADP ? GO:0000150 ... Q06609 37216117
    776422 8bsc:E (3.6) BS01 CA ? GO:0000150 ... Q06609 37216117
    776423 8bsc:E (3.6) BS02 ADP ? GO:0000150 ... Q06609 37216117
    776424 8bsc:F (3.6) BS01 CA ? GO:0000150 ... Q06609 37216117
    776425 8bsc:F (3.6) BS02 ADP ? GO:0000150 ... Q06609 37216117
    776426 8bsc:G (3.6) BS01 CA ? GO:0000150 ... Q06609 37216117
    776427 8bsc:G (3.6) BS02 ADP ? GO:0000150 ... Q06609 37216117
    776428 8bsd:A (1.95) BS01 TBN 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0004483 ... P0DTD1 N/A
    776429 8bsd:B (1.95) BS01 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0003723 ... P0DTD1 N/A
    776430 8bsd:B (1.95) BS02 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0003723 ... P0DTD1 N/A
    776431 8bsg:A (1.89) BS01 DIF ? GO:0003677 ... P49065 36675044
    776432 8bsg:A (1.89) BS02 DIF ? GO:0003677 ... P49065 36675044
    776433 8bsg:A (1.89) BS03 POG ? GO:0003677 ... P49065 36675044
    776434 8bsg:A (1.89) BS04 POG ? GO:0003677 ... P49065 36675044
    776435 8bsh:B (3.8) BS01 MG 3.6.5.- GO:0000139 ... P20606 36468689
    776436 8bsh:B (3.8) BS02 GNP 3.6.5.- GO:0000139 ... P20606 36468689
    776437 8bsi:LA (3.4) BS01 rna ? GO:0002181 ... E2RTN4 36912103
    776438 8bsi:LB (3.4) BS01 rna ? GO:0003723 ... A8BRZ3 36912103
    776439 8bsi:LC (3.4) BS01 rna ? GO:0003723 ... A8B7H8 36912103
    776440 8bsi:LC (3.4) BS02 rna ? GO:0003723 ... A8B7H8 36912103
    776441 8bsi:LF (3.4) BS01 rna ? GO:0000027 ... E2RU47 36912103
    776442 8bsi:LF (3.4) BS02 rna ? GO:0000027 ... E2RU47 36912103
    776443 8bsi:LG (3.4) BS01 rna ? GO:0003735 ... A0A644EZB9 36912103
    776444 8bsi:LG (3.4) BS02 rna ? GO:0003735 ... A0A644EZB9 36912103
    776445 8bsi:LH (3.4) BS01 rna ? GO:0000463 ... A8BRY6 36912103
    776446 8bsi:LH (3.4) BS02 rna ? GO:0000463 ... A8BRY6 36912103
    776447 8bsi:LI (3.4) BS01 rna ? GO:0000470 ... A8BLL7 36912103
    776448 8bsi:LI (3.4) BS02 rna ? GO:0000470 ... A8BLL7 36912103
    776449 8bsi:LJ (3.4) BS01 rna ? GO:0002181 ... A8BNT5 36912103
    776450 8bsi:LK (3.4) BS01 rna ? GO:0003735 ... A8BM86 36912103
    776451 8bsi:LK (3.4) BS02 rna ? GO:0003735 ... A8BM86 36912103
    776452 8bsi:LL (3.4) BS01 rna ? GO:0003723 ... A8BI95 36912103
    776453 8bsi:LL (3.4) BS02 rna ? GO:0003723 ... A8BI95 36912103
    776454 8bsi:LM (3.4) BS01 rna ? GO:0003735 ... N/A 36912103
    776455 8bsi:LM (3.4) BS02 rna ? GO:0003735 ... N/A 36912103
    776456 8bsi:LN (3.4) BS01 rna ? GO:0003723 ... A8B4F8 36912103
    776457 8bsi:LO (3.4) BS01 rna ? GO:0002181 ... A8B8Z6 36912103
    776458 8bsi:LO (3.4) BS02 rna ? GO:0002181 ... A8B8Z6 36912103
    776459 8bsi:LP (3.4) BS01 rna ? GO:0003729 ... A8BU75 36912103
    776460 8bsi:LQ (3.4) BS01 rna ? GO:0002181 ... A8BE76 36912103
    776461 8bsi:LQ (3.4) BS02 rna ? GO:0002181 ... A8BE76 36912103
    776462 8bsi:LR (3.4) BS01 rna ? GO:0003723 ... A8B4T7 36912103
    776463 8bsi:LS (3.4) BS01 rna ? GO:0003723 ... A8BH61 36912103
    776464 8bsi:LS (3.4) BS02 rna ? GO:0003723 ... A8BH61 36912103
    776465 8bsi:LT (3.4) BS01 rna ? GO:0002181 ... A0A644FBU1 36912103
    776466 8bsi:LT (3.4) BS02 rna ? GO:0002181 ... A0A644FBU1 36912103
    776467 8bsi:LU (3.4) BS01 rna ? GO:0003735 ... A8B2Q4 36912103
    776468 8bsi:LU (3.4) BS02 rna ? GO:0003735 ... A8B2Q4 36912103
    776469 8bsi:LV (3.4) BS01 rna ? GO:0002181 ... A0A644FC41 36912103
    776470 8bsi:LW (3.4) BS01 rna ? GO:0003735 ... A8BS37 36912103
    776471 8bsi:LX (3.4) BS01 rna ? GO:0003735 ... A8B7P2 36912103
    776472 8bsi:LY (3.4) BS01 rna ? GO:0003735 ... A8BMP6 36912103
    776473 8bsi:LY (3.4) BS02 rna ? GO:0003735 ... A8BMP6 36912103
    776474 8bsi:LZ (3.4) BS01 rna ? GO:0002181 ... A8BFT3 36912103
    776475 8bsi:LZ (3.4) BS02 rna ? GO:0002181 ... A8BFT3 36912103
    776476 8bsi:La (3.4) BS01 rna ? GO:0003735 ... A8B1T3 36912103
    776477 8bsi:Lb (3.4) BS01 rna ? GO:0003735 ... A8BZ78 36912103
    776478 8bsi:Lc (3.4) BS01 rna ? GO:0002181 ... A8BYY2 36912103
    776479 8bsi:Ld (3.4) BS01 rna ? GO:0003723 ... A8B5N7 36912103
    776480 8bsi:Le (3.4) BS01 rna ? GO:0002181 ... A8BMP3 36912103
    776481 8bsi:Lf (3.4) BS01 rna ? GO:0003735 ... A8BMD9 36912103
    776482 8bsi:Lg (3.4) BS01 rna ? GO:0002181 ... A8BKK5 36912103
    776483 8bsi:Lh (3.4) BS01 rna ? GO:0003735 ... A8BMF7 36912103
    776484 8bsi:Li (3.4) BS01 rna ? GO:0000463 ... A0A644FBK5 36912103
    776485 8bsi:Li (3.4) BS02 rna ? GO:0000463 ... A0A644FBK5 36912103
    776486 8bsi:Lj (3.4) BS01 rna ? GO:0002181 ... A8BYA6 36912103
    776487 8bsi:Lk (3.4) BS01 rna ? GO:0003723 ... A8BLV7 36912103
    776488 8bsi:Lk (3.4) BS02 rna ? GO:0003723 ... A8BLV7 36912103
    776489 8bsi:Ll (3.4) BS01 rna ? GO:0003735 ... A8B481 36912103
    776490 8bsi:Ln (3.4) BS01 rna ? GO:0003723 ... A0A644FB74 36912103
    776491 8bsi:Lp (3.4) BS01 rna ? GO:0003735 ... A8BQU8 36912103
    776492 8bsi:Lp (3.4) BS02 rna ? GO:0003735 ... A8BQU8 36912103
    776493 8bsi:Lq (3.4) BS01 rna ? GO:0003735 ... A8BN26 36912103
    776494 8bsi:Lq (3.4) BS02 rna ? GO:0003735 ... A8BN26 36912103
    776495 8bsi:Ls (3.4) BS01 rna ? GO:0003735 ... A8BXE1 36912103
    776496 8bsi:SA (3.4) BS01 rna ? GO:0000028 ... A8BE86 36912103
    776497 8bsi:SB (3.4) BS01 rna ? GO:0003723 ... A8BMZ1 36912103
    776498 8bsi:SC (3.4) BS01 rna ? GO:0003723 ... A8B8Z2 36912103
    776499 8bsi:SD (3.4) BS01 rna ? GO:0003735 ... A8BS79 36912103
    776500 8bsi:SE (3.4) BS01 rna ? GO:0003723 ... A8BFE3 36912103
    776501 8bsi:SF (3.4) BS01 rna ? GO:0000028 ... A8BZD3 36912103
    776502 8bsi:SG (3.4) BS01 rna ? GO:0003735 ... A8B6L8 36912103
    776503 8bsi:SH (3.4) BS01 rna ? GO:0003735 ... A8BT38 36912103
    776504 8bsi:SI (3.4) BS01 rna ? GO:0000462 ... A8B252 36912103
    776505 8bsi:SI (3.4) BS02 rna ? GO:0000462 ... A8B252 36912103
    776506 8bsi:SJ (3.4) BS01 rna ? GO:0003735 ... E2RU77 36912103
    776507 8bsi:SK (3.4) BS01 rna ? GO:0003723 ... A8BKS8 36912103
    776508 8bsi:SL (3.4) BS01 rna ? GO:0003723 ... A8BRX3 36912103
    776509 8bsi:SM (3.4) BS01 rna ? GO:0003735 ... A8BVU0 36912103
    776510 8bsi:SO (3.4) BS01 rna ? GO:0003735 ... A8BS96 36912103
    776511 8bsi:SP (3.4) BS01 rna ? GO:0003735 ... A8BE02 36912103
    776512 8bsi:SP (3.4) BS02 rna ? GO:0003735 ... A8BE02 36912103
    776513 8bsi:SQ (3.4) BS01 rna ? GO:0000028 ... E2RU83 36912103
    776514 8bsi:SR (3.4) BS01 rna ? GO:0000028 ... A8BBP3 36912103
    776515 8bsi:ST (3.4) BS01 rna ? GO:0000462 ... A8BKC6 36912103
    776516 8bsi:SU (3.4) BS01 rna ? GO:0003735 ... A8BRG5 36912103
    776517 8bsi:SV (3.4) BS01 rna ? GO:0003676 ... A8BZ58 36912103
    776518 8bsi:SW (3.4) BS01 rna ? GO:0000028 ... A0A644F964 36912103
    776519 8bsi:SX (3.4) BS01 rna ? GO:0003735 ... A8B4G0 36912103
    776520 8bsi:Sb (3.4) BS01 rna ? GO:0003735 ... A8B593 36912103
    776521 8bsi:Sc (3.4) BS01 rna ? GO:0003735 ... A8B8H7 36912103
    776522 8bsi:Sd (3.4) BS01 rna ? GO:0003729 ... A8BQZ7 36912103
    776523 8bsi:Se (3.4) BS01 rna ? GO:0000028 ... A0A644F5K9 36912103
    776524 8bsi:Sg (3.4) BS01 rna ? GO:0000028 ... A8B4F3 36912103
    776525 8bsi:Sh (3.4) BS01 rna ? GO:0002181 ... A0A644FA19 36912103
    776526 8bsi:Sj (3.4) BS01 rna ? GO:0003735 ... A0A644F843 36912103
    776527 8bsi:a (3.4) BS01 rna ? GO:0003746 ... A8BU59 36912103
    776528 8bsi:a (3.4) BS02 rna ? GO:0003746 ... A8BU59 36912103
    776529 8bsi:a (3.4) BS03 rna ? GO:0003746 ... A8BU59 36912103
    776530 8bsi:a (3.4) BS04 GDP ? GO:0003746 ... A8BU59 36912103
    776531 8bsj:LA (6.49) BS01 rna ? GO:0002181 ... E2RTN4 36912103
    776532 8bsj:LB (6.49) BS01 rna ? GO:0003723 ... A8BRZ3 36912103
    776533 8bsj:LC (6.49) BS01 rna ? GO:0003723 ... A8B7H8 36912103
    776534 8bsj:LC (6.49) BS02 rna ? GO:0003723 ... A8B7H8 36912103
    776535 8bsj:LF (6.49) BS01 rna ? GO:0000027 ... E2RU47 36912103
    776536 8bsj:LF (6.49) BS02 rna ? GO:0000027 ... E2RU47 36912103
    776537 8bsj:LG (6.49) BS01 rna ? GO:0003735 ... A0A644EZB9 36912103
    776538 8bsj:LG (6.49) BS02 rna ? GO:0003735 ... A0A644EZB9 36912103
    776539 8bsj:LH (6.49) BS01 rna ? GO:0000463 ... A8BRY6 36912103
    776540 8bsj:LH (6.49) BS02 rna ? GO:0000463 ... A8BRY6 36912103
    776541 8bsj:LI (6.49) BS01 rna ? GO:0000470 ... A8BLL7 36912103
    776542 8bsj:LI (6.49) BS02 rna ? GO:0000470 ... A8BLL7 36912103
    776543 8bsj:LJ (6.49) BS01 rna ? GO:0002181 ... A8BNT5 36912103
    776544 8bsj:LK (6.49) BS01 rna ? GO:0003735 ... A8BM86 36912103
    776545 8bsj:LK (6.49) BS02 rna ? GO:0003735 ... A8BM86 36912103
    776546 8bsj:LK (6.49) BS03 rna ? GO:0003735 ... A8BM86 36912103
    776547 8bsj:LL (6.49) BS01 rna ? GO:0003723 ... A8BI95 36912103
    776548 8bsj:LL (6.49) BS02 rna ? GO:0003723 ... A8BI95 36912103
    776549 8bsj:LL (6.49) BS03 rna ? GO:0003723 ... A8BI95 36912103
    776550 8bsj:LM (6.49) BS01 rna ? GO:0003735 ... N/A 36912103
    776551 8bsj:LM (6.49) BS02 rna ? GO:0003735 ... N/A 36912103
    776552 8bsj:LN (6.49) BS01 rna ? GO:0003723 ... A8B4F8 36912103
    776553 8bsj:LO (6.49) BS01 rna ? GO:0002181 ... A8B8Z6 36912103
    776554 8bsj:LO (6.49) BS02 rna ? GO:0002181 ... A8B8Z6 36912103
    776555 8bsj:LP (6.49) BS01 rna ? GO:0003729 ... A8BU75 36912103
    776556 8bsj:LQ (6.49) BS01 rna ? GO:0002181 ... A8BE76 36912103
    776557 8bsj:LQ (6.49) BS02 rna ? GO:0002181 ... A8BE76 36912103
    776558 8bsj:LR (6.49) BS01 rna ? GO:0003723 ... A8B4T7 36912103
    776559 8bsj:LS (6.49) BS01 rna ? GO:0003723 ... A8BH61 36912103
    776560 8bsj:LS (6.49) BS02 rna ? GO:0003723 ... A8BH61 36912103
    776561 8bsj:LT (6.49) BS01 rna ? GO:0003735 ... N/A 36912103
    776562 8bsj:LT (6.49) BS02 rna ? GO:0003735 ... N/A 36912103
    776563 8bsj:LU (6.49) BS01 rna ? GO:0003735 ... A8B2Q4 36912103
    776564 8bsj:LU (6.49) BS02 rna ? GO:0003735 ... A8B2Q4 36912103
    776565 8bsj:LV (6.49) BS01 rna ? GO:0002181 ... A0A644FC41 36912103
    776566 8bsj:LW (6.49) BS01 rna ? GO:0003735 ... A8BS37 36912103
    776567 8bsj:LW (6.49) BS02 rna ? GO:0003735 ... A8BS37 36912103
    776568 8bsj:LX (6.49) BS01 rna ? GO:0003735 ... A8B7P2 36912103
    776569 8bsj:LY (6.49) BS01 rna ? GO:0003735 ... A8BMP6 36912103
    776570 8bsj:LY (6.49) BS02 rna ? GO:0003735 ... A8BMP6 36912103
    776571 8bsj:LZ (6.49) BS01 rna ? GO:0002181 ... A8BFT3 36912103
    776572 8bsj:LZ (6.49) BS02 rna ? GO:0002181 ... A8BFT3 36912103
    776573 8bsj:La (6.49) BS01 rna ? GO:0003735 ... A8B1T3 36912103
    776574 8bsj:Lb (6.49) BS01 rna ? GO:0003735 ... A8BZ78 36912103
    776575 8bsj:Lc (6.49) BS01 rna ? GO:0002181 ... A8BYY2 36912103
    776576 8bsj:Ld (6.49) BS01 rna ? GO:0003723 ... A8B5N7 36912103
    776577 8bsj:Le (6.49) BS01 rna ? GO:0002181 ... A8BMP3 36912103
    776578 8bsj:Lf (6.49) BS01 rna ? GO:0003735 ... A8BMD9 36912103
    776579 8bsj:Lg (6.49) BS01 rna ? GO:0002181 ... A8BKK5 36912103
    776580 8bsj:Lh (6.49) BS01 rna ? GO:0003735 ... A8BMF7 36912103
    776581 8bsj:Li (6.49) BS01 rna ? GO:0000463 ... A0A644FBK5 36912103
    776582 8bsj:Li (6.49) BS02 rna ? GO:0000463 ... A0A644FBK5 36912103
    776583 8bsj:Lj (6.49) BS01 rna ? GO:0002181 ... A8BYA6 36912103
    776584 8bsj:Lk (6.49) BS01 rna ? GO:0003723 ... A8BLV7 36912103
    776585 8bsj:Lk (6.49) BS02 rna ? GO:0003723 ... A8BLV7 36912103
    776586 8bsj:Ll (6.49) BS01 rna ? GO:0003735 ... A8B481 36912103
    776587 8bsj:Ln (6.49) BS01 rna ? GO:0003723 ... A0A644FB74 36912103
    776588 8bsj:Lp (6.49) BS01 rna ? GO:0003735 ... A8BQU8 36912103
    776589 8bsj:Lp (6.49) BS02 rna ? GO:0003735 ... A8BQU8 36912103
    776590 8bsj:Lq (6.49) BS01 rna ? GO:0003735 ... A8BN26 36912103
    776591 8bsj:Ls (6.49) BS01 rna ? GO:0003735 ... A8BXE1 36912103
    776592 8bsj:SA (6.49) BS01 rna ? GO:0000028 ... A8BE86 36912103
    776593 8bsj:SB (6.49) BS01 rna ? GO:0003723 ... A8BMZ1 36912103
    776594 8bsj:SC (6.49) BS01 rna ? GO:0003723 ... A8B8Z2 36912103
    776595 8bsj:SD (6.49) BS01 rna ? GO:0003735 ... A8BS79 36912103
    776596 8bsj:SE (6.49) BS01 rna ? GO:0003723 ... A8BFE3 36912103
    776597 8bsj:SF (6.49) BS01 rna ? GO:0000028 ... A8BZD3 36912103
    776598 8bsj:SG (6.49) BS01 rna ? GO:0003735 ... A8B6L8 36912103
    776599 8bsj:SH (6.49) BS01 rna ? GO:0003735 ... A8BT38 36912103
    776600 8bsj:SI (6.49) BS01 rna ? GO:0000462 ... A8B252 36912103

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).