SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    777201 8bdm:I (2.021) BS01 QE9 ? N/A P40337 36749883
    777202 8bdm:L (2.021) BS01 QE9 ? N/A P40337 36749883
    777203 8bdn:C (2.76) BS01 QFR ? N/A P40337 36749883
    777204 8bdn:F (2.76) BS01 QFR ? N/A P40337 36749883
    777205 8bdn:I (2.76) BS01 QFR ? N/A P40337 36749883
    777206 8bdn:L (2.76) BS01 QFR ? N/A P40337 36749883
    777207 8bdo:C (2.8) BS01 QFF ? N/A P40337 36749883
    777208 8bdo:F (2.8) BS01 QFF ? N/A P40337 36749883
    777209 8bdr:A (2.7) BS01 rna 3.1.-.- GO:0003723 ... Q5V8Z9 36596301
    777210 8bdr:B (2.7) BS01 rna 2.7.7.48 GO:0000166 ... Q5V8Y6 36596301
    777211 8bdr:B (2.7) BS02 rna 2.7.7.48 GO:0000166 ... Q5V8Y6 36596301
    777212 8bdr:B (2.7) BS03 rna 2.7.7.48 GO:0000166 ... Q5V8Y6 36596301
    777213 8bdr:B (2.7) BS04 MG 2.7.7.48 GO:0000166 ... Q5V8Y6 36596301
    777214 8bdr:C (2.7) BS01 rna ? GO:0001172 ... Q5V8X3 36596301
    777215 8bdr:C (2.7) BS02 rna ? GO:0001172 ... Q5V8X3 36596301
    777216 8bdr:C (2.7) BS03 GTA ? GO:0001172 ... Q5V8X3 36596301
    777217 8bds:C (1.72) BS01 QIY ? N/A P40337 36749883
    777218 8bds:D (1.72) BS01 QIY ? N/A O60885 36749883
    777219 8bdt:A (2.7) BS01 QLX ? N/A O60885 36749883
    777220 8bdt:D (2.7) BS01 QLX ? N/A P40337 36749883
    777221 8bdt:E (2.7) BS01 QLX ? N/A O60885 36749883
    777222 8bdt:H (2.7) BS01 QLX ? N/A P40337 36749883
    777223 8bdx:A (2.93) BS01 QIY ? N/A O60885 36749883
    777224 8bdx:D (2.93) BS01 QIY ? N/A P40337 36749883
    777225 8bdx:E (2.93) BS01 QIY ? N/A O60885 36749883
    777226 8bdx:H (2.93) BS01 QIY ? N/A P40337 36749883
    777227 8bdy:A (3.05) BS01 QCU 2.3.2.27 N/A Q9UPN9 36430693
    777228 8bdy:A (3.05) BS02 ZN 2.3.2.27 N/A Q9UPN9 36430693
    777229 8bdy:A (3.05) BS03 ZN 2.3.2.27 N/A Q9UPN9 36430693
    777230 8be0:A (2.34) BS01 rna 3.1.-.- GO:0003723 ... Q5V8Z9 36596301
    777231 8be0:B (2.34) BS01 rna 2.7.7.48 GO:0000166 ... Q5V8Y6 36596301
    777232 8be0:B (2.34) BS02 rna 2.7.7.48 GO:0000166 ... Q5V8Y6 36596301
    777233 8be0:B (2.34) BS03 rna 2.7.7.48 GO:0000166 ... Q5V8Y6 36596301
    777234 8be0:B (2.34) BS04 MG 2.7.7.48 GO:0000166 ... Q5V8Y6 36596301
    777235 8be0:B (2.34) BS05 MG 2.7.7.48 GO:0000166 ... Q5V8Y6 36596301
    777236 8be0:C (2.34) BS01 rna ? GO:0001172 ... Q5V8X3 36596301
    777237 8be0:C (2.34) BS02 rna ? GO:0001172 ... Q5V8X3 36596301
    777238 8be0:C (2.34) BS03 GTA ? GO:0001172 ... Q5V8X3 36596301
    777239 8be3:A (1.85) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 39043660
    777240 8be3:R (1.85) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 39043660
    777241 8be6:S (2.8988) BS01 peptide ? GO:0005085 ... Q07889 37067463
    777242 8be7:S (3.0) BS01 peptide ? GO:0005085 ... Q07889 37067463
    777243 8be8:S (2.4) BS01 peptide ? GO:0005085 ... Q07889 37067463
    777244 8be9:S (2.51) BS01 peptide ? GO:0005085 ... Q07889 37067463
    777245 8bea:S (2.47) BS01 peptide ? GO:0005085 ... Q07889 37067463
    777246 8beb:C (3.18) BS01 QIK ? N/A P40337 36749883
    777247 8beb:D (3.18) BS01 QIK ? N/A O60885 36749883
    777248 8bec:A (1.7) BS01 BMA N/A N/A N/A N/A
    777249 8bec:A (1.7) BS02 MAN N/A N/A N/A N/A
    777250 8bec:B (1.7) BS01 MAN ? N/A P0DTC2 N/A
    777251 8bec:C (1.7) BS01 MAN N/A N/A N/A N/A
    777252 8bec:D (1.7) BS01 MAN ? N/A P0DTC2 N/A
    777253 8bed:E (2.03) BS01 FES 7.1.1.2 GO:0003954 ... O22769 36585502
    777254 8bed:F (2.03) BS01 FMN 7.1.1.2 GO:0005739 ... Q9FNN5 36585502
    777255 8bed:F (2.03) BS02 SF4 7.1.1.2 GO:0005739 ... Q9FNN5 36585502
    777256 8bed:G (2.03) BS01 peptide 7.1.1.2 GO:0005739 ... Q9FGI6 36585502
    777257 8bed:G (2.03) BS02 peptide 7.1.1.2 GO:0005739 ... Q9FGI6 36585502
    777258 8bed:G (2.03) BS03 FES 7.1.1.2 GO:0005739 ... Q9FGI6 36585502
    777259 8bed:G (2.03) BS04 SF4 7.1.1.2 GO:0005739 ... Q9FGI6 36585502
    777260 8bed:G (2.03) BS05 SF4 7.1.1.2 GO:0005739 ... Q9FGI6 36585502
    777261 8bed:R (2.03) BS01 peptide ? GO:0003674 ... Q9M9M6 36585502
    777262 8bed:R (2.03) BS02 ZN ? GO:0003674 ... Q9M9M6 36585502
    777263 8bee:B (2.04) BS01 SF4 7.1.1.2 GO:0005739 ... Q42577 36585502
    777264 8bee:D (2.04) BS01 peptide 7.1.1.2 GO:0005739 ... P93306 36585502
    777265 8bee:D (2.04) BS02 SF4 7.1.1.2 GO:0005739 ... P93306 36585502
    777266 8bee:I (2.04) BS01 SF4 7.1.1.2 GO:0003954 ... Q42599 36585502
    777267 8bee:I (2.04) BS02 SF4 7.1.1.2 GO:0003954 ... Q42599 36585502
    777268 8bee:P (2.04) BS01 NDP ? GO:0005739 ... Q9SK66 36585502
    777269 8bee:U (2.04) BS01 8Q1 ? GO:0000035 ... O80800 36585502
    777270 8bee:W (2.04) BS01 8Q1 ? GO:0003674 ... Q9LHI0 36585502
    777271 8bef:A (2.13) BS01 Q7G 7.1.1.2 GO:0005739 ... P92533 36585502
    777272 8bef:H (2.13) BS01 UQ9 7.1.1.2 GO:0003674 ... P92558 36585502
    777273 8bef:H (2.13) BS02 Q7G 7.1.1.2 GO:0003674 ... P92558 36585502
    777274 8bef:H (2.13) BS03 Q7G 7.1.1.2 GO:0003674 ... P92558 36585502
    777275 8bef:J (2.13) BS01 Q7G 7.1.1.2 GO:0005739 ... P60497 36585502
    777276 8bef:L (2.13) BS01 UQ5 7.1.1.2 GO:0005743 ... P29388 36585502
    777277 8bef:M (2.13) BS01 Q7G 7.1.1.2 GO:0003954 ... P93313 36585502
    777278 8bef:N (2.13) BS01 Q7G 7.1.1.2 GO:0003954 ... O05000 36585502
    777279 8bef:N (2.13) BS02 UQ5 7.1.1.2 GO:0003954 ... O05000 36585502
    777280 8bef:O (2.13) BS01 FE ? GO:0005515 ... Q9SRR8 36585502
    777281 8bef:X (2.13) BS01 Q7G ? GO:0003674 ... Q8LGE7 36585502
    777282 8bef:Z (2.13) BS01 Q7G ? GO:0003674 ... Q8RWA7 36585502
    777283 8bef:f (2.13) BS01 peptide ? GO:0003674 ... Q84W12 36585502
    777284 8bef:x (2.13) BS01 BCO ? GO:0000325 ... Q9SMN1 36585502
    777285 8bef:y (2.13) BS01 peptide 4.2.1.- GO:0004089 ... Q9C6B3 36585502
    777286 8bef:y (2.13) BS02 ZN 4.2.1.- GO:0004089 ... Q9C6B3 36585502
    777287 8bef:y (2.13) BS03 BCO 4.2.1.- GO:0004089 ... Q9C6B3 36585502
    777288 8bef:z (2.13) BS01 peptide 4.2.1.- GO:0004089 ... Q9FWR5 36585502
    777289 8beg:A (1.84) BS01 MG ? N/A Q04112 37860966
    777290 8beg:B (1.84) BS01 MG ? N/A Q04112 37860966
    777291 8beh:g (2.29) BS01 peptide ? GO:0003674 ... Q9SLC8 36585502
    777292 8beh:n (2.29) BS01 8Q1 ? GO:0000325 ... Q945M1 36585502
    777293 8beh:p (2.29) BS01 peptide ? GO:0003674 ... Q94C12 36585502
    777294 8bek:A (2.86) BS01 rna 3.1.-.- GO:0003723 ... M9TI86 36596301
    777295 8bek:A (2.86) BS02 rna 3.1.-.- GO:0003723 ... M9TI86 36596301
    777296 8bek:B (2.86) BS01 rna 2.7.7.48 GO:0000166 ... M9TLW3 36596301
    777297 8bek:B (2.86) BS02 rna 2.7.7.48 GO:0000166 ... M9TLW3 36596301
    777298 8bek:B (2.86) BS03 rna 2.7.7.48 GO:0000166 ... M9TLW3 36596301
    777299 8bek:B (2.86) BS04 MG 2.7.7.48 GO:0000166 ... M9TLW3 36596301
    777300 8bek:C (2.86) BS01 rna ? GO:0001172 ... X5F427 36596301
    777301 8bek:C (2.86) BS02 rna ? GO:0001172 ... X5F427 36596301
    777302 8bek:C (2.86) BS03 GTA ? GO:0001172 ... X5F427 36596301
    777303 8bel:C (2.25) BS01 HEM ? GO:0003674 ... P42792 36585502
    777304 8bel:C (2.25) BS02 HEM ? GO:0003674 ... P42792 36585502
    777305 8bel:C (2.25) BS03 UQ5 ? GO:0003674 ... P42792 36585502
    777306 8bel:C (2.25) BS04 UQ5 ? GO:0003674 ... P42792 36585502
    777307 8bel:D (2.25) BS01 peptide 7.1.1.8 GO:0005739 ... Q94JS0 36585502
    777308 8bel:D (2.25) BS02 FES 7.1.1.8 GO:0005739 ... Q94JS0 36585502
    777309 8bel:D (2.25) BS03 UQ7 7.1.1.8 GO:0005739 ... Q94JS0 36585502
    777310 8bel:E (2.25) BS01 HEM ? GO:0005515 ... Q9FKS5 36585502
    777311 8bel:I (2.25) BS01 peptide ? GO:0003674 ... Q9LXJ2 36585502
    777312 8bel:M (2.25) BS01 HEM ? GO:0003674 ... P42792 36585502
    777313 8bel:M (2.25) BS02 HEM ? GO:0003674 ... P42792 36585502
    777314 8bel:M (2.25) BS03 UQ5 ? GO:0003674 ... P42792 36585502
    777315 8bel:M (2.25) BS04 UQ7 ? GO:0003674 ... P42792 36585502
    777316 8bel:M (2.25) BS05 Q7G ? GO:0003674 ... P42792 36585502
    777317 8bel:N (2.25) BS01 peptide 7.1.1.8 GO:0005739 ... Q94JS0 36585502
    777318 8bel:N (2.25) BS02 FES 7.1.1.8 GO:0005739 ... Q94JS0 36585502
    777319 8bel:O (2.25) BS01 HEM ? GO:0005515 ... Q9FKS5 36585502
    777320 8bel:S (2.25) BS01 peptide ? GO:0003674 ... Q9LXJ2 36585502
    777321 8bem:A (2.6) BS01 AV9 2.7.11.1 GO:0004672 ... Q9H2G2 N/A
    777322 8bem:B (2.6) BS01 AV9 2.7.11.1 GO:0004672 ... Q9H2G2 N/A
    777323 8bem:D (2.6) BS01 AV9 2.7.11.1 GO:0004672 ... Q9H2G2 N/A
    777324 8bem:G (2.6) BS01 AV9 2.7.11.1 GO:0004672 ... Q9H2G2 N/A
    777325 8beo:A (1.96) BS01 MG 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777326 8beo:A (1.96) BS02 MG 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777327 8beo:A (1.96) BS03 FAD 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777328 8beo:A (1.96) BS04 TDK 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777329 8beo:A (1.96) BS05 UQ0 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777330 8beo:A (1.96) BS06 MG 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777331 8beo:B (1.96) BS01 MG 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777332 8beo:B (1.96) BS02 MG 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777333 8beo:B (1.96) BS03 FAD 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777334 8beo:B (1.96) BS04 TDK 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777335 8beo:B (1.96) BS05 ALU 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777336 8beo:B (1.96) BS06 UQ0 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777337 8beo:C (1.96) BS01 MG 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777338 8beo:C (1.96) BS02 FAD 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777339 8beo:C (1.96) BS03 TDK 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777340 8beo:C (1.96) BS04 UQ0 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777341 8beo:C (1.96) BS05 MG 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777342 8beo:C (1.96) BS06 ALU 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777343 8beo:C (1.96) BS07 TDK 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777344 8beo:D (1.96) BS01 MG 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777345 8beo:D (1.96) BS02 FAD 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777346 8beo:D (1.96) BS03 TDK 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777347 8beo:D (1.96) BS04 UQ0 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777348 8beo:D (1.96) BS05 MG 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777349 8beo:D (1.96) BS06 TDK 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777350 8beo:E (1.96) BS01 TDK 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777351 8beo:E (1.96) BS02 MG 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777352 8beo:E (1.96) BS03 MG 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777353 8beo:E (1.96) BS04 FAD 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777354 8beo:E (1.96) BS05 TDK 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777355 8beo:E (1.96) BS06 UQ0 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777356 8beo:E (1.96) BS07 MG 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777357 8beo:F (1.96) BS01 TDK 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777358 8beo:F (1.96) BS02 ALU 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777359 8beo:F (1.96) BS03 MG 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777360 8beo:F (1.96) BS04 MG 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777361 8beo:F (1.96) BS05 FAD 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777362 8beo:F (1.96) BS06 TDK 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777363 8beo:F (1.96) BS07 UQ0 4.1.1.47 GO:0000287 ... P0AEP7 N/A
    777364 8bep:B (2.29) BS01 peptide 3.4.24.64 GO:0000325 ... Q42290 36585502
    777365 8bep:B (2.29) BS02 ZN 3.4.24.64 GO:0000325 ... Q42290 36585502
    777366 8bep:L (2.29) BS01 peptide 3.4.24.64 GO:0000325 ... Q42290 36585502
    777367 8bep:L (2.29) BS02 ZN 3.4.24.64 GO:0000325 ... Q42290 36585502
    777368 8beq:A (2.07) BS01 MAN 3.2.1.26 GO:0004553 ... A0A856TAI5 36499311
    777369 8beq:B (2.07) BS01 MAN 3.2.1.26 GO:0004553 ... A0A856TAI5 36499311
    777370 8beq:B (2.07) BS02 MAN 3.2.1.26 GO:0004553 ... A0A856TAI5 36499311
    777371 8beq:B (2.07) BS03 MAN 3.2.1.26 GO:0004553 ... A0A856TAI5 36499311
    777372 8beq:B (2.07) BS04 MAN 3.2.1.26 GO:0004553 ... A0A856TAI5 36499311
    777373 8beq:B (2.07) BS05 MAN 3.2.1.26 GO:0004553 ... A0A856TAI5 36499311
    777374 8beq:B (2.07) BS06 MAN 3.2.1.26 GO:0004553 ... A0A856TAI5 36499311
    777375 8bes:A (1.86) BS01 MAN 3.2.1.26 GO:0004553 ... A0A856TAI5 36499311
    777376 8bes:A (1.86) BS02 MAN 3.2.1.26 GO:0004553 ... A0A856TAI5 36499311
    777377 8bes:A (1.86) BS03 FRU 3.2.1.26 GO:0004553 ... A0A856TAI5 36499311
    777378 8bes:A (1.86) BS04 MAN 3.2.1.26 GO:0004553 ... A0A856TAI5 36499311
    777379 8bes:B (1.86) BS01 MAN 3.2.1.26 GO:0004553 ... A0A856TAI5 36499311
    777380 8bes:B (1.86) BS02 MAN 3.2.1.26 GO:0004553 ... A0A856TAI5 36499311
    777381 8bes:B (1.86) BS03 FRU 3.2.1.26 GO:0004553 ... A0A856TAI5 36499311
    777382 8bes:C (1.86) BS01 MAN 3.2.1.26 GO:0004553 ... A0A856TAI5 36499311
    777383 8bes:C (1.86) BS02 MAN 3.2.1.26 GO:0004553 ... A0A856TAI5 36499311
    777384 8bes:C (1.86) BS03 MAN 3.2.1.26 GO:0004553 ... A0A856TAI5 36499311
    777385 8bes:C (1.86) BS04 MAN 3.2.1.26 GO:0004553 ... A0A856TAI5 36499311
    777386 8bes:C (1.86) BS05 FRU 3.2.1.26 GO:0004553 ... A0A856TAI5 36499311
    777387 8bes:D (1.86) BS01 MAN 3.2.1.26 GO:0004553 ... A0A856TAI5 36499311
    777388 8bes:D (1.86) BS02 MAN 3.2.1.26 GO:0004553 ... A0A856TAI5 36499311
    777389 8bes:D (1.86) BS03 FRU 3.2.1.26 GO:0004553 ... A0A856TAI5 36499311
    777390 8bet:A (2.38) BS01 GLC 3.2.1.26 GO:0004553 ... A0A856TAI5 36499311
    777391 8bet:A (2.38) BS02 FRU 3.2.1.26 GO:0004553 ... A0A856TAI5 36499311
    777392 8bet:A (2.38) BS03 MAN 3.2.1.26 GO:0004553 ... A0A856TAI5 36499311
    777393 8bet:A (2.38) BS04 MAN 3.2.1.26 GO:0004553 ... A0A856TAI5 36499311
    777394 8bet:A (2.38) BS05 MAN 3.2.1.26 GO:0004553 ... A0A856TAI5 36499311
    777395 8bet:B (2.38) BS01 GLC 3.2.1.26 GO:0004553 ... A0A856TAI5 36499311
    777396 8bet:B (2.38) BS02 FRU 3.2.1.26 GO:0004553 ... A0A856TAI5 36499311
    777397 8bet:B (2.38) BS03 MAN 3.2.1.26 GO:0004553 ... A0A856TAI5 36499311
    777398 8bet:B (2.38) BS04 MAN 3.2.1.26 GO:0004553 ... A0A856TAI5 36499311
    777399 8bet:B (2.38) BS05 MAN 3.2.1.26 GO:0004553 ... A0A856TAI5 36499311
    777400 8bet:C (2.38) BS01 GLC 3.2.1.26 GO:0004553 ... A0A856TAI5 36499311
    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).