SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    777401 8bv3:E (2.38) BS02 ANP ? GO:0003677 ... P05648 38097584
    777402 8bv3:E (2.38) BS03 MG ? GO:0003677 ... P05648 38097584
    777403 8bv4:A (1.95) BS01 4D6 3.5.2.6 GO:0005576 ... P9WKD3 37335937
    777404 8bv5:A (3.54) BS01 FOK 4.6.1.1 GO:0004016 ... E1BQ12 38351373
    777405 8bv5:B (3.54) BS01 GSP ? GO:0003924 ... P04896 38351373
    777406 8bv5:B (3.54) BS02 MG ? GO:0003924 ... P04896 38351373
    777407 8bv7:A (1.8) BS01 peptide ? N/A A0A369S7Y8 N/A
    777408 8bva:A (2.19) BS01 peptide ? GO:0008168 ... Q3UKX1 N/A
    777409 8bva:A (2.19) BS02 QVR ? GO:0008168 ... Q3UKX1 N/A
    777410 8bvd:A (2.995) BS01 RLO ? GO:0007155 ... P08191 36839848
    777411 8bvd:B (2.995) BS01 RLO ? GO:0007155 ... P08191 36839848
    777412 8bvd:C (2.995) BS01 RLO ? GO:0007155 ... P08191 36839848
    777413 8bvd:D (2.995) BS01 RLO ? GO:0007155 ... P08191 36839848
    777414 8bvf:A (2.68) BS01 peptide 2.10.1.1 GO:0005737 ... Q8NS03 37679597
    777415 8bvf:B (2.68) BS01 peptide 2.10.1.1 GO:0005737 ... Q8NS03 37679597
    777416 8bvh:B (3.6) BS01 rna 3.1.11.2 GO:0003824 ... G3XDB0 36504222
    777417 8bvh:D (3.6) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    777418 8bvh:E (3.6) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    777419 8bvh:F (3.6) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    777420 8bvh:G (3.6) BS01 rna 3.1.11.2 GO:0003824 ... G3XDB0 36504222
    777421 8bvh:H (3.6) BS01 rna 3.1.11.2 GO:0003824 ... G3XDB0 36504222
    777422 8bvh:I (3.6) BS01 rna 3.1.11.2 GO:0003824 ... G3XDB0 36504222
    777423 8bvh:J (3.6) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    777424 8bvh:K (3.6) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    777425 8bvh:L (3.6) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    777426 8bvh:M (3.6) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    777427 8bvh:N (3.6) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    777428 8bvh:O (3.6) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    777429 8bvh:P (3.6) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    777430 8bvh:Q (3.6) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    777431 8bvh:R (3.6) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    777432 8bvh:S (3.6) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    777433 8bvh:T (3.6) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    777434 8bvh:U (3.6) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    777435 8bvh:w (3.6) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    777436 8bvh:x (3.6) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    777437 8bvj:A (4.5) BS01 rna 3.1.11.2 GO:0003824 ... Q51380 36504222
    777438 8bvj:C (4.5) BS01 rna 3.1.11.2 GO:0003824 ... Q51380 36504222
    777439 8bvj:D (4.5) BS01 rna ? GO:0003723 ... A6VD57 36504222
    777440 8bvj:F (4.5) BS01 rna ? GO:0003723 ... A6VD57 36504222
    777441 8bvj:G (4.5) BS01 rna 3.1.11.2 GO:0003824 ... Q51380 36504222
    777442 8bvj:I (4.5) BS01 rna ? GO:0003723 ... A6VD57 36504222
    777443 8bvj:K (4.5) BS01 rna ? GO:0003723 ... A6VD57 36504222
    777444 8bvj:L (4.5) BS01 rna ? GO:0003723 ... A6VD57 36504222
    777445 8bvj:M (4.5) BS01 rna ? GO:0003723 ... A6VD57 36504222
    777446 8bvj:N (4.5) BS01 rna ? GO:0003723 ... A6VD57 36504222
    777447 8bvj:P (4.5) BS01 rna ? GO:0003723 ... A6VD57 36504222
    777448 8bvj:Q (4.5) BS01 rna 3.1.11.2 GO:0003824 ... Q51380 36504222
    777449 8bvj:R (4.5) BS01 rna ? GO:0003723 ... A6VD57 36504222
    777450 8bvj:S (4.5) BS01 rna ? GO:0003723 ... A6VD57 36504222
    777451 8bvj:U (4.5) BS01 rna ? GO:0003723 ... A6VD57 36504222
    777452 8bvj:W (4.5) BS01 rna ? GO:0003723 ... A6VD57 36504222
    777453 8bvj:X (4.5) BS01 rna ? GO:0003723 ... A6VD57 36504222
    777454 8bvj:Y (4.5) BS01 rna ? GO:0003723 ... A6VD57 36504222
    777455 8bvk:A (2.0) BS01 MN N/A N/A N/A 37932298
    777456 8bvk:A (2.0) BS02 MN N/A N/A N/A 37932298
    777457 8bvk:B (2.0) BS01 MN N/A N/A N/A 37932298
    777458 8bvl:A (2.24) BS01 ZN 2.3.2.31 GO:0008270 ... Q9BYM8 36685275
    777459 8bvl:A (2.24) BS02 ZN 2.3.2.31 GO:0008270 ... Q9BYM8 36685275
    777460 8bvl:A (2.24) BS03 ZN 2.3.2.31 GO:0008270 ... Q9BYM8 36685275
    777461 8bvl:A (2.24) BS04 ZN 2.3.2.31 GO:0008270 ... Q9BYM8 36685275
    777462 8bvl:A (2.24) BS05 ZN 2.3.2.31 GO:0008270 ... Q9BYM8 36685275
    777463 8bvl:B (2.24) BS01 ZN 2.3.2.31 GO:0008270 ... Q9BYM8 36685275
    777464 8bvl:B (2.24) BS02 ZN 2.3.2.31 GO:0008270 ... Q9BYM8 36685275
    777465 8bvl:B (2.24) BS03 ZN 2.3.2.31 GO:0008270 ... Q9BYM8 36685275
    777466 8bvl:B (2.24) BS04 ZN 2.3.2.31 GO:0008270 ... Q9BYM8 36685275
    777467 8bvl:B (2.24) BS05 ZN 2.3.2.31 GO:0008270 ... Q9BYM8 36685275
    777468 8bvm:A (3.8) BS01 rna 3.1.11.2 GO:0003824 ... Q51380 36504222
    777469 8bvm:B (3.8) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    777470 8bvm:C (3.8) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    777471 8bvm:D (3.8) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    777472 8bvm:E (3.8) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    777473 8bvm:F (3.8) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    777474 8bvm:G (3.8) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    777475 8bvm:H (3.8) BS01 rna 3.1.11.2 GO:0003824 ... Q51380 36504222
    777476 8bvm:I (3.8) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    777477 8bvm:J (3.8) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    777478 8bvm:K (3.8) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    777479 8bvm:L (3.8) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    777480 8bvm:N (3.8) BS01 rna 3.1.11.2 GO:0003824 ... Q51380 36504222
    777481 8bvm:O (3.8) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    777482 8bvq:A (3.3) BS01 peptide ? GO:0005515 ... P0A940 37162386
    777483 8bvs:A (3.61) BS01 TFO ? GO:0005452 ... O35956 37482561
    777484 8bvt:A (3.94) BS01 RTO ? GO:0005452 ... O35956 37482561
    777485 8bvw:0 (4.0) BS01 dna 5.6.2.4 GO:0000112 ... P19447 37148879
    777486 8bvw:0 (4.0) BS02 dna 5.6.2.4 GO:0000112 ... P19447 37148879
    777487 8bvw:0 (4.0) BS03 peptide 5.6.2.4 GO:0000112 ... P19447 37148879
    777488 8bvw:0 (4.0) BS04 peptide 5.6.2.4 GO:0000112 ... P19447 37148879
    777489 8bvw:1 (4.0) BS01 SF4 3.6.4.12 GO:0000439 ... P18074 37148879
    777490 8bvw:4 (4.0) BS01 ZN ? GO:0000438 ... Q13888 37148879
    777491 8bvw:4 (4.0) BS02 ZN ? GO:0000438 ... Q13888 37148879
    777492 8bvw:4 (4.0) BS03 ZN ? GO:0000438 ... Q13888 37148879
    777493 8bvw:5 (4.0) BS01 ZN ? GO:0000438 ... Q13889 37148879
    777494 8bvw:5 (4.0) BS02 ZN ? GO:0000438 ... Q13889 37148879
    777495 8bvw:A (4.0) BS01 ZN 2.7.7.6 GO:0000428 ... A0A7M4DUC2 37148879
    777496 8bvw:A (4.0) BS02 ZN 2.7.7.6 GO:0000428 ... A0A7M4DUC2 37148879
    777497 8bvw:A (4.0) BS03 MG 2.7.7.6 GO:0000428 ... A0A7M4DUC2 37148879
    777498 8bvw:B (4.0) BS01 ZN 2.7.7.6 GO:0000428 ... I3LGP4 37148879
    777499 8bvw:C (4.0) BS01 ZN ? GO:0000428 ... I3LCH3 37148879
    777500 8bvw:I (4.0) BS01 ZN ? GO:0000428 ... P60899 37148879
    777501 8bvw:I (4.0) BS02 ZN ? GO:0000428 ... P60899 37148879
    777502 8bvw:J (4.0) BS01 ZN ? GO:0000428 ... A0A4X1VYD0 37148879
    777503 8bvw:L (4.0) BS01 ZN ? GO:0001054 ... A0A4X1TRS6 37148879
    777504 8bvw:M (4.0) BS01 dna 2.3.1.48 GO:0000776 ... Q00403 37148879
    777505 8bvw:M (4.0) BS02 dna 2.3.1.48 GO:0000776 ... Q00403 37148879
    777506 8bvw:M (4.0) BS03 ZN 2.3.1.48 GO:0000776 ... Q00403 37148879
    777507 8bvw:O (4.0) BS01 dna ? GO:0000785 ... P20226 37148879
    777508 8bvw:O (4.0) BS02 dna ? GO:0000785 ... P20226 37148879
    777509 8bvw:R (4.0) BS01 dna 3.6.4.12 GO:0003677 ... P13984 37148879
    777510 8bvw:R (4.0) BS02 dna 3.6.4.12 GO:0003677 ... P13984 37148879
    777511 8bvw:U (4.0) BS01 dna ? GO:0000979 ... P52655 37148879
    777512 8bvw:W (4.0) BS01 ZN ? GO:0005515 ... P29083 37148879
    777513 8bvw:a (4.0) BS01 dna ? GO:0000786 ... P84233 37148879
    777514 8bvw:a (4.0) BS02 dna ? GO:0000786 ... P84233 37148879
    777515 8bvw:b (4.0) BS01 dna ? GO:0000786 ... P62799 37148879
    777516 8bvw:b (4.0) BS02 dna ? GO:0000786 ... P62799 37148879
    777517 8bvw:c (4.0) BS01 dna ? GO:0000786 ... P06897 37148879
    777518 8bvw:c (4.0) BS02 dna ? GO:0000786 ... P06897 37148879
    777519 8bvw:d (4.0) BS01 dna ? GO:0000786 ... P02281 37148879
    777520 8bvw:d (4.0) BS02 dna ? GO:0000786 ... P02281 37148879
    777521 8bvw:e (4.0) BS01 dna ? GO:0000786 ... P84233 37148879
    777522 8bvw:e (4.0) BS02 dna ? GO:0000786 ... P84233 37148879
    777523 8bvw:f (4.0) BS01 dna ? GO:0000786 ... P62799 37148879
    777524 8bvw:f (4.0) BS02 dna ? GO:0000786 ... P62799 37148879
    777525 8bvw:g (4.0) BS01 dna ? GO:0000786 ... P06897 37148879
    777526 8bvw:g (4.0) BS02 dna ? GO:0000786 ... P06897 37148879
    777527 8bvw:h (4.0) BS01 dna ? GO:0000786 ... P02281 37148879
    777528 8bvw:h (4.0) BS02 dna ? GO:0000786 ... P02281 37148879
    777529 8bvx:A (2.35) BS01 RYF 3.2.2.-
    4.2.99.18
    GO:0000702 ... O08760 N/A
    777530 8bw1:G (3.25) BS01 MG ? GO:0000502 ... P21243 38513038
    777531 8bw1:H (3.25) BS01 peptide 3.4.25.1 GO:0004298 ... P25043 38513038
    777532 8bw1:K (3.25) BS01 peptide 3.4.25.1 GO:0004298 ... P30656 38513038
    777533 8bw1:K (3.25) BS02 MG 3.4.25.1 GO:0004298 ... P30656 38513038
    777534 8bw1:N (3.25) BS01 MG 3.4.25.1 GO:0000502 ... P38624 38513038
    777535 8bw1:V (3.25) BS01 peptide 3.4.25.1 GO:0004298 ... P25043 38513038
    777536 8bw1:V (3.25) BS02 MG 3.4.25.1 GO:0004298 ... P25043 38513038
    777537 8bw1:Y (3.25) BS01 peptide 3.4.25.1 GO:0004298 ... P30656 38513038
    777538 8bw1:Y (3.25) BS02 MG 3.4.25.1 GO:0004298 ... P30656 38513038
    777539 8bw2:A (1.35) BS01 Y3Y ? N/A Q8WWQ0 N/A
    777540 8bw3:A (1.3) BS01 Y3V ? N/A Q8WWQ0 N/A
    777541 8bw4:A (1.55) BS01 Y3S ? N/A Q8WWQ0 N/A
    777542 8bw5:H (2.8) BS01 dna 3.4.21.5 GO:0004252 ... P00734 37503836
    777543 8bw5:H (2.8) BS02 0G6 3.4.21.5 GO:0004252 ... P00734 37503836
    777544 8bw6:A (1.95) BS01 CA 2.7.11.1 N/A Q8WZ42 36830985
    777545 8bw7:A (3.53) BS01 AKG ? GO:0005452 ... O35956 37482561
    777546 8bw9:C (3.32) BS01 ANP 2.7.12.2 GO:0000165 ... Q24324 38388830
    777547 8bw9:C (3.32) BS02 QOM 2.7.12.2 GO:0000165 ... Q24324 38388830
    777548 8bw9:C (3.32) BS03 MG 2.7.12.2 GO:0000165 ... Q24324 38388830
    777549 8bwe:A (2.0) BS01 peptide ? GO:0000122 ... P31947 38405965
    777550 8bwe:A (2.0) BS02 UH9 ? GO:0000122 ... P31947 38405965
    777551 8bwf:A (2.9) BS01 peptide ? GO:0003676 ... P26599 37564416
    777552 8bwf:A (2.9) BS02 peptide ? GO:0003676 ... P26599 37564416
    777553 8bwf:B (2.9) BS01 peptide ? GO:0003676 ... P26599 37564416
    777554 8bwf:B (2.9) BS02 peptide ? GO:0003676 ... P26599 37564416
    777555 8bwf:C (2.9) BS01 peptide ? GO:0003676 ... P26599 37564416
    777556 8bwf:D (2.9) BS01 peptide ? GO:0003676 ... P26599 37564416
    777557 8bwf:D (2.9) BS02 peptide ? GO:0003676 ... P26599 37564416
    777558 8bwf:E (2.9) BS01 peptide ? GO:0003676 ... P26599 37564416
    777559 8bwf:F (2.9) BS01 peptide ? GO:0003676 ... P26599 37564416
    777560 8bwf:F (2.9) BS02 peptide ? GO:0003676 ... P26599 37564416
    777561 8bwf:G (2.9) BS01 peptide ? GO:0003676 ... P26599 37564416
    777562 8bwf:H (2.9) BS01 peptide ? GO:0003676 ... P26599 37564416
    777563 8bwf:H (2.9) BS02 peptide ? GO:0003676 ... P26599 37564416
    777564 8bwf:I (2.9) BS01 peptide ? GO:0003676 ... P26599 37564416
    777565 8bwf:J (2.9) BS01 peptide ? GO:0003676 ... P26599 37564416
    777566 8bwf:J (2.9) BS02 peptide ? GO:0003676 ... P26599 37564416
    777567 8bwf:K (2.9) BS01 peptide ? GO:0003676 ... P26599 37564416
    777568 8bwf:L (2.9) BS01 peptide ? GO:0003676 ... P26599 37564416
    777569 8bwf:L (2.9) BS02 peptide ? GO:0003676 ... P26599 37564416
    777570 8bwf:N (2.9) BS01 peptide ? GO:0003676 ... P26599 37564416
    777571 8bwf:N (2.9) BS02 peptide ? GO:0003676 ... P26599 37564416
    777572 8bwf:O (2.9) BS01 peptide ? GO:0003676 ... P26599 37564416
    777573 8bwf:O (2.9) BS02 peptide ? GO:0003676 ... P26599 37564416
    777574 8bwf:P (2.9) BS01 peptide ? GO:0003676 ... P26599 37564416
    777575 8bwg:R (1.32) BS01 GDP 3.6.5.2 GO:0003924 ... P01112 38297137
    777576 8bwh:A (2.1) BS01 peptide ? GO:0000122 ... P31947 38405965
    777577 8bwh:A (2.1) BS02 MG ? GO:0000122 ... P31947 38405965
    777578 8bwh:A (2.1) BS03 XSL ? GO:0000122 ... P31947 38405965
    777579 8bwj:A (1.6) BS01 peptide ? GO:0000122 ... P31947 37455289
    777580 8bwj:A (1.6) BS02 RYR ? GO:0000122 ... P31947 37455289
    777581 8bwl:A (1.96) BS01 CA N/A GO:0005576 ... P43026 38862520
    777582 8bwl:B (1.96) BS01 CA N/A GO:0005576 ... P43026 38862520
    777583 8bwl:C (1.96) BS01 CA N/A N/A Q9GZX9 38862520
    777584 8bwl:D (1.96) BS01 CA N/A N/A Q9GZX9 38862520
    777585 8bwm:A (2.5) BS01 CA N/A GO:0005576 ... P43026 38862520
    777586 8bwm:B (2.5) BS01 CA N/A GO:0005576 ... P43026 38862520
    777587 8bwm:D (2.5) BS01 CA N/A N/A Q9GZX9 38862520
    777588 8bwn:A (2.57) BS01 CA N/A GO:0005576 ... P43026 38862520
    777589 8bwn:B (2.57) BS01 CA N/A GO:0005576 ... P43026 38862520
    777590 8bwn:D (2.57) BS01 CA N/A N/A Q9GZX9 38862520
    777591 8bwo:A (3.2) BS01 ATP 7.6.2.-
    7.6.2.2
    7.6.2.3
    GO:0001409 ... O15439 37683641
    777592 8bwo:A (3.2) BS02 ATP 7.6.2.-
    7.6.2.2
    7.6.2.3
    GO:0001409 ... O15439 37683641
    777593 8bwo:A (3.2) BS03 MG 7.6.2.-
    7.6.2.2
    7.6.2.3
    GO:0001409 ... O15439 37683641
    777594 8bwp:A (3.6) BS01 MTX 7.6.2.-
    7.6.2.2
    7.6.2.3
    GO:0001409 ... O15439 37683641
    777595 8bwq:A (3.9) BS01 TTC 7.6.2.-
    7.6.2.2
    7.6.2.3
    GO:0001409 ... O15439 37683641
    777596 8bwr:A (4.0) BS01 P2E 7.6.2.-
    7.6.2.2
    7.6.2.3
    GO:0001409 ... O15439 37683641
    777597 8bws:A (3.2) BS01 dna 2.7.7.6 GO:0000428 ... P04051 36977686
    777598 8bws:A (3.2) BS02 dna 2.7.7.6 GO:0000428 ... P04051 36977686
    777599 8bws:A (3.2) BS03 rna 2.7.7.6 GO:0000428 ... P04051 36977686
    777600 8bws:A (3.2) BS04 ZN 2.7.7.6 GO:0000428 ... P04051 36977686

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).