SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    777601 8bge:S (2.11) BS01 rna ? GO:0000027 ... P68919 37553384
    777602 8bge:T (2.11) BS01 rna ? GO:0000027 ... P0A7L8 37553384
    777603 8bge:U (2.11) BS01 rna ? GO:0000027 ... P0A7M2 37553384
    777604 8bge:V (2.11) BS01 rna ? GO:0000027 ... P0A7M6 37553384
    777605 8bge:W (2.11) BS01 rna ? GO:0000027 ... P0AG51 37553384
    777606 8bge:a (2.11) BS01 rna ? GO:0000027 ... P0A7N4 37553384
    777607 8bge:b (2.11) BS01 rna ? GO:0000027 ... P0A7N9 37553384
    777608 8bge:c (2.11) BS01 rna ? GO:0002181 ... P0A7P5 37553384
    777609 8bge:d (2.11) BS01 rna ? GO:0002181 ... P0A7Q1 37553384
    777610 8bge:e (2.11) BS01 rna ? GO:0002181 ... P0A7Q6 37553384
    777611 8bge:f (2.11) BS01 rna ? GO:0000028 ... P0A7V0 37553384
    777612 8bge:g (2.11) BS01 rna ? GO:0000028 ... P0A7V3 37553384
    777613 8bge:h (2.11) BS01 rna ? GO:0000028 ... P0A7V8 37553384
    777614 8bge:i (2.11) BS01 rna ? GO:0000028 ... P0A7W1 37553384
    777615 8bge:j (2.11) BS01 rna ? GO:0002181 ... P02358 37553384
    777616 8bge:k (2.11) BS01 rna ? GO:0000028 ... P02359 37553384
    777617 8bge:l (2.11) BS01 rna ? GO:0000028 ... P0A7W7 37553384
    777618 8bge:m (2.11) BS01 rna ? GO:0002181 ... P0A7X3 37553384
    777619 8bge:m (2.11) BS02 rna ? GO:0002181 ... P0A7X3 37553384
    777620 8bge:n (2.11) BS01 rna ? GO:0000049 ... P0A7R5 37553384
    777621 8bge:o (2.11) BS01 rna ? GO:0002181 ... P0A7R9 37553384
    777622 8bge:p (2.11) BS01 rna ? GO:0000049 ... P0A7S3 37553384
    777623 8bge:q (2.11) BS01 rna ? GO:0000049 ... P0A7S9 37553384
    777624 8bge:r (2.11) BS01 rna ? GO:0000028 ... P0AG59 37553384
    777625 8bge:s (2.11) BS01 rna ? GO:0000028 ... P0ADZ4 37553384
    777626 8bge:s (2.11) BS02 rna ? GO:0000028 ... P0ADZ4 37553384
    777627 8bge:t (2.11) BS01 rna ? GO:0000028 ... P0A7T3 37553384
    777628 8bge:u (2.11) BS01 rna ? GO:0000028 ... P0AG63 37553384
    777629 8bge:v (2.11) BS01 rna ? GO:0002181 ... P0A7T7 37553384
    777630 8bge:w (2.11) BS01 rna ? GO:0002181 ... P0A7U3 37553384
    777631 8bge:x (2.11) BS01 rna ? GO:0000028 ... P0A7U7 37553384
    777632 8bge:y (2.11) BS01 rna ? GO:0000028 ... P68679 37553384
    777633 8bgh:A (2.88) BS01 rna ? GO:0000027 ... P60422 37553384
    777634 8bgh:B (2.88) BS01 rna ? GO:0000027 ... P60438 37553384
    777635 8bgh:C (2.88) BS01 rna ? GO:0001070 ... P60723 37553384
    777636 8bgh:D (2.88) BS01 rna ? GO:0000027 ... P62399 37553384
    777637 8bgh:D (2.88) BS02 rna ? GO:0000027 ... P62399 37553384
    777638 8bgh:D (2.88) BS03 rna ? GO:0000027 ... P62399 37553384
    777639 8bgh:E (2.88) BS01 rna ? GO:0000027 ... P0AG55 37553384
    777640 8bgh:F (2.88) BS01 rna ? GO:0002181 ... P0A7R1 37553384
    777641 8bgh:G (2.88) BS01 rna ? GO:0002181 ... P0AA10 37553384
    777642 8bgh:H (2.88) BS01 rna ? GO:0002181 ... P0ADY3 37553384
    777643 8bgh:H (2.88) BS02 rna ? GO:0002181 ... P0ADY3 37553384
    777644 8bgh:I (2.88) BS01 rna ? GO:0002181 ... P02413 37553384
    777645 8bgh:J (2.88) BS01 rna ? GO:0000027 ... P0ADY7 37553384
    777646 8bgh:K (2.88) BS01 rna ? GO:0000027 ... P0AG44 37553384
    777647 8bgh:L (2.88) BS01 rna ? GO:0002181 ... P0C018 37553384
    777648 8bgh:L (2.88) BS02 rna ? GO:0002181 ... P0C018 37553384
    777649 8bgh:M (2.88) BS01 rna ? GO:0000027 ... P0A7K6 37553384
    777650 8bgh:M (2.88) BS02 rna ? GO:0000027 ... P0A7K6 37553384
    777651 8bgh:N (2.88) BS01 rna ? GO:0000027 ... P0A7L3 37553384
    777652 8bgh:O (2.88) BS01 rna ? GO:0002181 ... P0AG48 37553384
    777653 8bgh:P (2.88) BS01 rna ? GO:0002181 ... P61175 37553384
    777654 8bgh:Q (2.88) BS01 rna ? GO:0000027 ... P0ADZ0 37553384
    777655 8bgh:R (2.88) BS01 rna ? GO:0000027 ... P60624 37553384
    777656 8bgh:S (2.88) BS01 rna ? GO:0000027 ... P68919 37553384
    777657 8bgh:T (2.88) BS01 rna ? GO:0000027 ... P0A7L8 37553384
    777658 8bgh:U (2.88) BS01 rna ? GO:0000027 ... P0A7M2 37553384
    777659 8bgh:V (2.88) BS01 rna ? GO:0000027 ... P0A7M6 37553384
    777660 8bgh:W (2.88) BS01 rna ? GO:0000027 ... P0AG51 37553384
    777661 8bgh:X (2.88) BS01 rna ? GO:0002181 ... P0A7M9 37553384
    777662 8bgh:a (2.88) BS01 rna ? GO:0000027 ... P0A7N4 37553384
    777663 8bgh:b (2.88) BS01 rna ? GO:0000027 ... P0A7N9 37553384
    777664 8bgh:c (2.88) BS01 rna ? GO:0002181 ... P0A7P5 37553384
    777665 8bgh:d (2.88) BS01 rna ? GO:0002181 ... P0A7Q1 37553384
    777666 8bgh:e (2.88) BS01 rna ? GO:0002181 ... P0A7Q6 37553384
    777667 8bgh:f (2.88) BS01 rna ? GO:0000028 ... P0A7V0 37553384
    777668 8bgh:g (2.88) BS01 rna ? GO:0000028 ... P0A7V3 37553384
    777669 8bgh:h (2.88) BS01 rna ? GO:0000028 ... P0A7V8 37553384
    777670 8bgh:i (2.88) BS01 rna ? GO:0000028 ... P0A7W1 37553384
    777671 8bgh:j (2.88) BS01 rna ? GO:0002181 ... P02358 37553384
    777672 8bgh:k (2.88) BS01 rna ? GO:0000028 ... P02359 37553384
    777673 8bgh:l (2.88) BS01 rna ? GO:0000028 ... P0A7W7 37553384
    777674 8bgh:m (2.88) BS01 rna ? GO:0002181 ... P0A7X3 37553384
    777675 8bgh:n (2.88) BS01 rna ? GO:0000049 ... P0A7R5 37553384
    777676 8bgh:o (2.88) BS01 rna ? GO:0002181 ... P0A7R9 37553384
    777677 8bgh:p (2.88) BS01 rna ? GO:0000049 ... P0A7S3 37553384
    777678 8bgh:q (2.88) BS01 rna ? GO:0000049 ... P0A7S9 37553384
    777679 8bgh:r (2.88) BS01 rna ? GO:0000028 ... P0AG59 37553384
    777680 8bgh:s (2.88) BS01 rna ? GO:0000028 ... P0ADZ4 37553384
    777681 8bgh:s (2.88) BS02 rna ? GO:0000028 ... P0ADZ4 37553384
    777682 8bgh:t (2.88) BS01 rna ? GO:0000028 ... P0A7T3 37553384
    777683 8bgh:u (2.88) BS01 rna ? GO:0000028 ... P0AG63 37553384
    777684 8bgh:v (2.88) BS01 rna ? GO:0002181 ... P0A7T7 37553384
    777685 8bgh:w (2.88) BS01 rna ? GO:0002181 ... P0A7U3 37553384
    777686 8bgh:x (2.88) BS01 rna ? GO:0000028 ... P0A7U7 37553384
    777687 8bgh:y (2.88) BS01 rna ? GO:0000028 ... P68679 37553384
    777688 8bgi:A (2.56) BS01 FYP ? GO:0004888 ... P31644 37903907
    777689 8bgi:A (2.56) BS02 P9N ? GO:0004888 ... P31644 37903907
    777690 8bgi:A (2.56) BS03 FYP ? GO:0004888 ... P31644 37903907
    777691 8bgi:A (2.56) BS04 P9N ? GO:0004888 ... P31644 37903907
    777692 8bgi:B (2.56) BS01 FYP ? GO:0004888 ... P31644 37903907
    777693 8bgi:B (2.56) BS02 P9N ? GO:0004888 ... P31644 37903907
    777694 8bgi:B (2.56) BS03 FYP ? GO:0004888 ... P31644 37903907
    777695 8bgi:B (2.56) BS04 P9N ? GO:0004888 ... P31644 37903907
    777696 8bgi:C (2.56) BS01 FYP ? GO:0004888 ... P31644 37903907
    777697 8bgi:C (2.56) BS02 P9N ? GO:0004888 ... P31644 37903907
    777698 8bgi:C (2.56) BS03 FYP ? GO:0004888 ... P31644 37903907
    777699 8bgi:C (2.56) BS04 P9N ? GO:0004888 ... P31644 37903907
    777700 8bgi:D (2.56) BS01 FYP ? GO:0004888 ... P31644 37903907
    777701 8bgi:D (2.56) BS02 P9N ? GO:0004888 ... P31644 37903907
    777702 8bgi:D (2.56) BS03 FYP ? GO:0004888 ... P31644 37903907
    777703 8bgi:D (2.56) BS04 P9N ? GO:0004888 ... P31644 37903907
    777704 8bgi:E (2.56) BS01 FYP ? GO:0004888 ... P31644 37903907
    777705 8bgi:E (2.56) BS02 P9N ? GO:0004888 ... P31644 37903907
    777706 8bgi:E (2.56) BS03 FYP ? GO:0004888 ... P31644 37903907
    777707 8bgi:E (2.56) BS04 P9N ? GO:0004888 ... P31644 37903907
    777708 8bgj:A (1.63) BS01 MG 2.7.7.49 GO:0003723 ... I7LG99 37279911
    777709 8bgj:B (1.63) BS01 MG 2.7.7.49 GO:0003723 ... I7LG99 37279911
    777710 8bgj:C (1.63) BS01 MG 2.7.7.49 GO:0003723 ... I7LG99 37279911
    777711 8bgl:A (2.0) BS01 ABA ? GO:0006091 ... Q9U6Y8 36748340
    777712 8bgl:B (2.0) BS01 ABA ? GO:0006091 ... Q9U6Y8 36748340
    777713 8bgn:A (2.76) BS01 ZN ? GO:0016811 ... A0A160VQZ8 36555375
    777714 8bgn:B (2.76) BS01 ZN ? GO:0016811 ... A0A160VQZ8 36555375
    777715 8bgn:C (2.76) BS01 ZN ? GO:0016811 ... A0A160VQZ8 36555375
    777716 8bgo:A (3.08) BS01 ZN 3.5.1.136 GO:0016811 ... A0A160VQZ8 36555375
    777717 8bgo:B (3.08) BS01 ZN 3.5.1.136 GO:0016811 ... A0A160VQZ8 36555375
    777718 8bgo:C (3.08) BS01 ZN 3.5.1.136 GO:0016811 ... A0A160VQZ8 36555375
    777719 8bgo:D (3.08) BS01 ZN 3.5.1.136 GO:0016811 ... A0A160VQZ8 36555375
    777720 8bgo:E (3.08) BS01 ZN 3.5.1.136 GO:0016811 ... A0A160VQZ8 36555375
    777721 8bgo:F (3.08) BS01 ZN 3.5.1.136 GO:0016811 ... A0A160VQZ8 36555375
    777722 8bgo:G (3.08) BS01 ZN 3.5.1.136 GO:0016811 ... A0A160VQZ8 36555375
    777723 8bgo:H (3.08) BS01 ZN 3.5.1.136 GO:0016811 ... A0A160VQZ8 36555375
    777724 8bgo:I (3.08) BS01 ZN 3.5.1.136 GO:0016811 ... A0A160VQZ8 36555375
    777725 8bgo:J (3.08) BS01 ZN 3.5.1.136 GO:0016811 ... A0A160VQZ8 36555375
    777726 8bgo:K (3.08) BS01 ZN 3.5.1.136 GO:0016811 ... A0A160VQZ8 36555375
    777727 8bgo:L (3.08) BS01 ZN 3.5.1.136 GO:0016811 ... A0A160VQZ8 36555375
    777728 8bgp:A (2.51) BS01 ZN ? GO:0016811 ... A0A160VQZ8 36555375
    777729 8bgp:B (2.51) BS01 ZN ? GO:0016811 ... A0A160VQZ8 36555375
    777730 8bgp:C (2.51) BS01 ZN ? GO:0016811 ... A0A160VQZ8 36555375
    777731 8bgp:D (2.51) BS01 ZN ? GO:0016811 ... A0A160VQZ8 36555375
    777732 8bgp:E (2.51) BS01 ZN ? GO:0016811 ... A0A160VQZ8 36555375
    777733 8bgp:F (2.51) BS01 ZN ? GO:0016811 ... A0A160VQZ8 36555375
    777734 8bgt:A (2.15) BS01 SAM ? GO:0008168 ... Q7MY08 36963398
    777735 8bgt:A (2.15) BS02 TRP ? GO:0008168 ... Q7MY08 36963398
    777736 8bgt:B (2.15) BS01 SAM ? GO:0008168 ... Q7MY08 36963398
    777737 8bgu:A (4.1) BS01 rna ? GO:0000027 ... P46777 37291423
    777738 8bgu:B (4.1) BS01 rna ? GO:0000027 ... P62913 37291423
    777739 8bgw:A (2.2) BS01 HEM N/A GO:0004129 ... N/A 37296134
    777740 8bgw:A (2.2) BS02 HEM N/A GO:0004129 ... N/A 37296134
    777741 8bgw:A (2.2) BS03 FE N/A GO:0004129 ... N/A 37296134
    777742 8bgw:A (2.2) BS04 CA N/A GO:0004129 ... N/A 37296134
    777743 8bgw:A (2.2) BS05 10M N/A GO:0004129 ... N/A 37296134
    777744 8bgw:A (2.2) BS06 UQ1 N/A GO:0004129 ... N/A 37296134
    777745 8bgw:A (2.2) BS07 LOP N/A GO:0004129 ... N/A 37296134
    777746 8bgw:A (2.2) BS08 LOP N/A GO:0004129 ... N/A 37296134
    777747 8bgw:A (2.2) BS09 LOP N/A GO:0004129 ... N/A 37296134
    777748 8bgw:A (2.2) BS10 LOP N/A GO:0004129 ... N/A 37296134
    777749 8bgw:A (2.2) BS11 LOP N/A GO:0004129 ... N/A 37296134
    777750 8bgw:A (2.2) BS12 LOP N/A GO:0004129 ... N/A 37296134
    777751 8bgw:A (2.2) BS13 10M N/A GO:0004129 ... N/A 37296134
    777752 8bgw:A (2.2) BS14 LOP N/A GO:0004129 ... N/A 37296134
    777753 8bgw:A (2.2) BS15 LOP N/A GO:0004129 ... N/A 37296134
    777754 8bgw:B (2.2) BS01 10M N/A GO:0004129 ... N/A 37296134
    777755 8bgw:B (2.2) BS02 LOP N/A GO:0004129 ... N/A 37296134
    777756 8bgw:B (2.2) BS03 LOP N/A GO:0004129 ... N/A 37296134
    777757 8bgw:B (2.2) BS04 LOP N/A GO:0004129 ... N/A 37296134
    777758 8bgw:B (2.2) BS05 10M N/A GO:0004129 ... N/A 37296134
    777759 8bgw:B (2.2) BS06 HEM N/A GO:0004129 ... N/A 37296134
    777760 8bgw:B (2.2) BS07 HEM N/A GO:0004129 ... N/A 37296134
    777761 8bgw:B (2.2) BS08 FE N/A GO:0004129 ... N/A 37296134
    777762 8bgw:B (2.2) BS09 CA N/A GO:0004129 ... N/A 37296134
    777763 8bgw:B (2.2) BS10 UQ1 N/A GO:0004129 ... N/A 37296134
    777764 8bgw:B (2.2) BS11 LOP N/A GO:0004129 ... N/A 37296134
    777765 8bgw:B (2.2) BS12 LOP N/A GO:0004129 ... N/A 37296134
    777766 8bgw:B (2.2) BS13 LOP N/A GO:0004129 ... N/A 37296134
    777767 8bgw:B (2.2) BS14 LOP N/A GO:0004129 ... N/A 37296134
    777768 8bgw:B (2.2) BS15 LOP N/A GO:0004129 ... N/A 37296134
    777769 8bgw:B (2.2) BS16 LOP N/A GO:0004129 ... N/A 37296134
    777770 8bgx:A (1.9) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    777771 8bgx:A (1.9) BS02 QPF ? GO:0008168 ... Q7MY08 36963398
    777772 8bgx:B (1.9) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    777773 8bgx:B (1.9) BS02 QPF ? GO:0008168 ... Q7MY08 36963398
    777774 8bgx:C (1.9) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    777775 8bgx:C (1.9) BS02 QPF ? GO:0008168 ... Q7MY08 36963398
    777776 8bgx:D (1.9) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    777777 8bgx:D (1.9) BS02 QPF ? GO:0008168 ... Q7MY08 36963398
    777778 8bgy:A (1.95) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    777779 8bgy:A (1.95) BS02 QP3 ? GO:0008168 ... Q7MY08 36963398
    777780 8bgy:B (1.95) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    777781 8bgy:B (1.95) BS02 QP3 ? GO:0008168 ... Q7MY08 36963398
    777782 8bgy:C (1.95) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    777783 8bgy:C (1.95) BS02 QP3 ? GO:0008168 ... Q7MY08 36963398
    777784 8bgy:D (1.95) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    777785 8bgy:D (1.95) BS02 QP3 ? GO:0008168 ... Q7MY08 36963398
    777786 8bgz:A (2.0) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    777787 8bgz:A (2.0) BS02 QOI ? GO:0008168 ... Q7MY08 36963398
    777788 8bgz:B (2.0) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    777789 8bgz:B (2.0) BS02 QOI ? GO:0008168 ... Q7MY08 36963398
    777790 8bgz:C (2.0) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    777791 8bgz:C (2.0) BS02 QOI ? GO:0008168 ... Q7MY08 36963398
    777792 8bgz:D (2.0) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    777793 8bgz:D (2.0) BS02 QOI ? GO:0008168 ... Q7MY08 36963398
    777794 8bh0:A (1.7) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    777795 8bh0:A (1.7) BS02 QPO ? GO:0008168 ... Q7MY08 36963398
    777796 8bh0:B (1.7) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    777797 8bh0:B (1.7) BS02 QPO ? GO:0008168 ... Q7MY08 36963398
    777798 8bh0:C (1.7) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    777799 8bh0:C (1.7) BS02 QPO ? GO:0008168 ... Q7MY08 36963398
    777800 8bh0:D (1.7) BS01 SAH ? GO:0008168 ... Q7MY08 36963398

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).