SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    778001 8bhf:Y1 (3.1) BS02 rna ? GO:0003735 ... G1SYU7 N/A
    778002 8bhf:Y3 (3.1) BS01 rna ? GO:0003735 ... G1SZ47 N/A
    778003 8bhf:Z1 (3.1) BS01 rna N/A GO:0003735 ... N/A N/A
    778004 8bhf:Z1 (3.1) BS02 ZN N/A GO:0003735 ... N/A N/A
    778005 8bhf:Z3 (3.1) BS01 rna ? GO:0003735 ... A0A5F9D2E6 N/A
    778006 8bhf:a3 (3.1) BS01 rna ? N/A G1TDB3 N/A
    778007 8bhf:b1 (3.1) BS01 rna ? GO:0003735 ... G1T040 N/A
    778008 8bhf:b1 (3.1) BS02 ZN ? GO:0003735 ... G1T040 N/A
    778009 8bhf:b3 (3.1) BS01 rna N/A GO:0003735 ... N/A N/A
    778010 8bhf:b3 (3.1) BS02 ZN N/A GO:0003735 ... N/A N/A
    778011 8bhf:c1 (3.1) BS01 rna ? GO:0003735 ... G1SY53 N/A
    778012 8bhf:c1 (3.1) BS02 ZN ? GO:0003735 ... G1SY53 N/A
    778013 8bhf:c3 (3.1) BS01 rna ? GO:0003735 ... G1TZ76 N/A
    778014 8bhf:d1 (3.1) BS01 rna ? GO:0003735 ... G1U7L1 N/A
    778015 8bhf:d3 (3.1) BS01 rna ? GO:0000028 ... G1TIB4 N/A
    778016 8bhf:e1 (3.1) BS01 rna ? N/A G1SPK4 N/A
    778017 8bhf:e3 (3.1) BS01 rna ? GO:0002181 ... G1U7M4 N/A
    778018 8bhf:e3 (3.1) BS02 ZN ? GO:0002181 ... G1U7M4 N/A
    778019 8bhf:f1 (3.1) BS01 rna ? GO:0003735 ... G1SMR7 N/A
    778020 8bhf:f3 (3.1) BS01 rna ? GO:0003735 ... A0A5F9D9G5 N/A
    778021 8bhf:g3 (3.1) BS01 rna ? GO:0003735 ... G1SK22 N/A
    778022 8bhf:h3 (3.1) BS01 rna ? GO:0001891 ... G1SJB4 N/A
    778023 8bhf:j3 (3.1) BS01 rna N/A GO:0003723 ... N/A N/A
    778024 8bhf:j3 (3.1) BS02 rna N/A GO:0003723 ... N/A N/A
    778025 8bhf:j3 (3.1) BS03 MG N/A GO:0003723 ... N/A N/A
    778026 8bhf:k3 (3.1) BS01 rna ? GO:0003723 ... G1TL06 N/A
    778027 8bhf:l1 (3.1) BS01 rna N/A GO:0003723 ... N/A N/A
    778028 8bhf:l3 (3.1) BS01 rna ? GO:0003735 ... G1SVW5 N/A
    778029 8bhf:l3 (3.1) BS02 rna ? GO:0003735 ... G1SVW5 N/A
    778030 8bhf:m3 (3.1) BS01 rna ? GO:0000027 ... P19949 N/A
    778031 8bhf:m3 (3.1) BS02 rna ? GO:0000027 ... P19949 N/A
    778032 8bhf:n1 (3.1) BS01 rna ? GO:0005634 ... B7Z6J7 N/A
    778033 8bhf:n1 (3.1) BS02 rna ? GO:0005634 ... B7Z6J7 N/A
    778034 8bhf:n1 (3.1) BS03 rna ? GO:0005634 ... B7Z6J7 N/A
    778035 8bhf:n3 (3.1) BS01 rna ? GO:0003735 ... G1SKF7 N/A
    778036 8bhf:o3 (3.1) BS01 rna ? GO:0000463 ... G1SV32 N/A
    778037 8bhf:o3 (3.1) BS02 rna ? GO:0000463 ... G1SV32 N/A
    778038 8bhf:p3 (3.1) BS01 rna ? GO:0003723 ... G1STW0 N/A
    778039 8bhf:p3 (3.1) BS02 rna ? GO:0003723 ... G1STW0 N/A
    778040 8bhf:q3 (3.1) BS01 rna ? GO:0002181 ... G1SWI6 N/A
    778041 8bhf:r3 (3.1) BS01 rna ? GO:0003735 ... B7NZQ2 N/A
    778042 8bhf:r3 (3.1) BS02 rna ? GO:0003735 ... B7NZQ2 N/A
    778043 8bhf:s3 (3.1) BS01 rna ? GO:0003735 ... G1TUB8 N/A
    778044 8bhf:s3 (3.1) BS02 rna ? GO:0003735 ... G1TUB8 N/A
    778045 8bhf:s3 (3.1) BS03 rna ? GO:0003735 ... G1TUB8 N/A
    778046 8bhf:t3 (3.1) BS01 rna ? GO:0003723 ... G1TKB3 N/A
    778047 8bhf:t3 (3.1) BS02 rna ? GO:0003723 ... G1TKB3 N/A
    778048 8bhf:u3 (3.1) BS01 rna ? GO:0003723 ... G1SZ12 N/A
    778049 8bhg:A (2.39) BS01 QMU ? GO:0004888 ... P31644 37903907
    778050 8bhg:A (2.39) BS02 DMU ? GO:0004888 ... P31644 37903907
    778051 8bhg:A (2.39) BS03 QMU ? GO:0004888 ... P31644 37903907
    778052 8bhg:A (2.39) BS04 DMU ? GO:0004888 ... P31644 37903907
    778053 8bhg:B (2.39) BS01 QMU ? GO:0004888 ... P18507 37903907
    778054 8bhg:B (2.39) BS02 QMU ? GO:0004888 ... P18507 37903907
    778055 8bhg:B (2.39) BS03 DMU ? GO:0004888 ... P18507 37903907
    778056 8bhg:C (2.39) BS01 QMU ? GO:0004888 ... P31644 37903907
    778057 8bhg:C (2.39) BS02 DMU ? GO:0004888 ... P31644 37903907
    778058 8bhg:C (2.39) BS03 QMU ? GO:0004888 ... P31644 37903907
    778059 8bhg:D (2.39) BS01 QMU ? GO:0004888 ... P31644 37903907
    778060 8bhg:D (2.39) BS02 QMU ? GO:0004888 ... P31644 37903907
    778061 8bhg:D (2.39) BS03 DMU ? GO:0004888 ... P31644 37903907
    778062 8bhg:D (2.39) BS04 DMU ? GO:0004888 ... P31644 37903907
    778063 8bhg:E (2.39) BS01 QMU ? GO:0004888 ... P31644 37903907
    778064 8bhg:E (2.39) BS02 QMU ? GO:0004888 ... P31644 37903907
    778065 8bhg:E (2.39) BS03 DMU ? GO:0004888 ... P31644 37903907
    778066 8bhh:A (1.69) BS01 CA 3.1.1.-
    3.1.1.73
    GO:0030600 ... A0A2H3G048 36961270
    778067 8bhh:B (1.69) BS01 MAN 3.1.1.-
    3.1.1.73
    GO:0030600 ... A0A2H3G048 36961270
    778068 8bhh:B (1.69) BS02 MAN 3.1.1.-
    3.1.1.73
    GO:0030600 ... A0A2H3G048 36961270
    778069 8bhh:B (1.69) BS03 CA 3.1.1.-
    3.1.1.73
    GO:0030600 ... A0A2H3G048 36961270
    778070 8bhi:A (2.67) BS01 QKF ? GO:0004888 ... P31644 37903907
    778071 8bhi:A (2.67) BS02 QKF ? GO:0004888 ... P31644 37903907
    778072 8bhi:B (2.67) BS01 QKF ? GO:0004888 ... P31644 37903907
    778073 8bhi:B (2.67) BS02 QKF ? GO:0004888 ... P31644 37903907
    778074 8bhi:C (2.67) BS01 QKF ? GO:0004888 ... P31644 37903907
    778075 8bhi:C (2.67) BS02 QKF ? GO:0004888 ... P31644 37903907
    778076 8bhi:D (2.67) BS01 QKF ? GO:0004888 ... P31644 37903907
    778077 8bhi:D (2.67) BS02 QKF ? GO:0004888 ... P31644 37903907
    778078 8bhi:E (2.67) BS01 QKF ? GO:0004888 ... P31644 37903907
    778079 8bhi:E (2.67) BS02 QKF ? GO:0004888 ... P31644 37903907
    778080 8bhj:A (2.81) BS01 rna ? GO:0000027 ... P60422 37553384
    778081 8bhj:B (2.81) BS01 rna ? GO:0000027 ... P60438 37553384
    778082 8bhj:C (2.81) BS01 rna ? GO:0001070 ... P60723 37553384
    778083 8bhj:D (2.81) BS01 rna ? GO:0000027 ... P62399 37553384
    778084 8bhj:D (2.81) BS02 rna ? GO:0000027 ... P62399 37553384
    778085 8bhj:D (2.81) BS03 rna ? GO:0000027 ... P62399 37553384
    778086 8bhj:E (2.81) BS01 rna ? GO:0000027 ... P0AG55 37553384
    778087 8bhj:F (2.81) BS01 rna ? GO:0002181 ... P0A7R1 37553384
    778088 8bhj:G (2.81) BS01 rna ? GO:0002181 ... P0AA10 37553384
    778089 8bhj:H (2.81) BS01 rna ? GO:0002181 ... P0ADY3 37553384
    778090 8bhj:H (2.81) BS02 rna ? GO:0002181 ... P0ADY3 37553384
    778091 8bhj:I (2.81) BS01 rna ? GO:0002181 ... P02413 37553384
    778092 8bhj:J (2.81) BS01 rna ? GO:0000027 ... P0ADY7 37553384
    778093 8bhj:J (2.81) BS02 rna ? GO:0000027 ... P0ADY7 37553384
    778094 8bhj:K (2.81) BS01 rna ? GO:0000027 ... P0AG44 37553384
    778095 8bhj:L (2.81) BS01 rna ? GO:0002181 ... P0C018 37553384
    778096 8bhj:L (2.81) BS02 rna ? GO:0002181 ... P0C018 37553384
    778097 8bhj:M (2.81) BS01 rna ? GO:0000027 ... P0A7K6 37553384
    778098 8bhj:M (2.81) BS02 rna ? GO:0000027 ... P0A7K6 37553384
    778099 8bhj:N (2.81) BS01 rna ? GO:0000027 ... P0A7L3 37553384
    778100 8bhj:O (2.81) BS01 rna ? GO:0002181 ... P0AG48 37553384
    778101 8bhj:P (2.81) BS01 rna ? GO:0002181 ... P61175 37553384
    778102 8bhj:Q (2.81) BS01 rna ? GO:0000027 ... P0ADZ0 37553384
    778103 8bhj:R (2.81) BS01 rna ? GO:0000027 ... P60624 37553384
    778104 8bhj:S (2.81) BS01 rna ? GO:0000027 ... P68919 37553384
    778105 8bhj:T (2.81) BS01 rna ? GO:0000027 ... P0A7L8 37553384
    778106 8bhj:U (2.81) BS01 rna ? GO:0000027 ... P0A7M2 37553384
    778107 8bhj:V (2.81) BS01 rna ? GO:0000027 ... P0A7M6 37553384
    778108 8bhj:W (2.81) BS01 rna ? GO:0000027 ... P0AG51 37553384
    778109 8bhj:a (2.81) BS01 rna ? GO:0000027 ... P0A7N4 37553384
    778110 8bhj:b (2.81) BS01 rna ? GO:0000027 ... P0A7N9 37553384
    778111 8bhj:c (2.81) BS01 rna ? GO:0002181 ... P0A7P5 37553384
    778112 8bhj:d (2.81) BS01 rna ? GO:0002181 ... P0A7Q1 37553384
    778113 8bhj:e (2.81) BS01 rna ? GO:0002181 ... P0A7Q6 37553384
    778114 8bhj:f (2.81) BS01 rna ? GO:0000028 ... P0A7V0 37553384
    778115 8bhj:g (2.81) BS01 rna ? GO:0000028 ... P0A7V3 37553384
    778116 8bhj:h (2.81) BS01 rna ? GO:0000028 ... P0A7V8 37553384
    778117 8bhj:i (2.81) BS01 rna ? GO:0000028 ... P0A7W1 37553384
    778118 8bhj:j (2.81) BS01 rna ? GO:0002181 ... P02358 37553384
    778119 8bhj:k (2.81) BS01 rna ? GO:0000028 ... P02359 37553384
    778120 8bhj:l (2.81) BS01 rna ? GO:0000028 ... P0A7W7 37553384
    778121 8bhj:m (2.81) BS01 rna ? GO:0002181 ... P0A7X3 37553384
    778122 8bhj:m (2.81) BS02 rna ? GO:0002181 ... P0A7X3 37553384
    778123 8bhj:n (2.81) BS01 rna ? GO:0000049 ... P0A7R5 37553384
    778124 8bhj:o (2.81) BS01 rna ? GO:0002181 ... P0A7R9 37553384
    778125 8bhj:p (2.81) BS01 rna ? GO:0000049 ... P0A7S3 37553384
    778126 8bhj:q (2.81) BS01 rna ? GO:0000049 ... P0A7S9 37553384
    778127 8bhj:r (2.81) BS01 rna ? GO:0000028 ... P0AG59 37553384
    778128 8bhj:s (2.81) BS01 rna ? GO:0000028 ... P0ADZ4 37553384
    778129 8bhj:t (2.81) BS01 rna ? GO:0000028 ... P0A7T3 37553384
    778130 8bhj:u (2.81) BS01 rna ? GO:0000028 ... P0AG63 37553384
    778131 8bhj:v (2.81) BS01 rna ? GO:0002181 ... P0A7T7 37553384
    778132 8bhj:w (2.81) BS01 rna ? GO:0002181 ... P0A7U3 37553384
    778133 8bhj:x (2.81) BS01 rna ? GO:0000028 ... P0A7U7 37553384
    778134 8bhj:y (2.81) BS01 rna ? GO:0000028 ... P68679 37553384
    778135 8bhk:A (3.3) BS01 DZP ? GO:0004888 ... P31644 37903907
    778136 8bhk:B (3.3) BS01 DZP ? GO:0004888 ... P31644 37903907
    778137 8bhk:C (3.3) BS01 DZP ? GO:0004888 ... P31644 37903907
    778138 8bhk:D (3.3) BS01 DZP ? GO:0004888 ... P31644 37903907
    778139 8bhk:E (3.3) BS01 DZP ? GO:0004888 ... P31644 37903907
    778140 8bhl:A (2.21) BS01 rna ? GO:0000027 ... P60422 37553384
    778141 8bhl:B (2.21) BS01 rna ? GO:0000027 ... P60438 37553384
    778142 8bhl:C (2.21) BS01 rna ? GO:0001070 ... P60723 37553384
    778143 8bhl:D (2.21) BS01 rna ? GO:0000027 ... P62399 37553384
    778144 8bhl:D (2.21) BS02 rna ? GO:0000027 ... P62399 37553384
    778145 8bhl:D (2.21) BS03 rna ? GO:0000027 ... P62399 37553384
    778146 8bhl:E (2.21) BS01 rna ? GO:0000027 ... P0AG55 37553384
    778147 8bhl:F (2.21) BS01 rna ? GO:0002181 ... P0A7R1 37553384
    778148 8bhl:G (2.21) BS01 rna ? GO:0002181 ... P0AA10 37553384
    778149 8bhl:H (2.21) BS01 rna ? GO:0002181 ... P0ADY3 37553384
    778150 8bhl:H (2.21) BS02 rna ? GO:0002181 ... P0ADY3 37553384
    778151 8bhl:I (2.21) BS01 rna ? GO:0002181 ... P02413 37553384
    778152 8bhl:J (2.21) BS01 rna ? GO:0000027 ... P0ADY7 37553384
    778153 8bhl:K (2.21) BS01 rna ? GO:0000027 ... P0AG44 37553384
    778154 8bhl:L (2.21) BS01 rna ? GO:0002181 ... P0C018 37553384
    778155 8bhl:L (2.21) BS02 rna ? GO:0002181 ... P0C018 37553384
    778156 8bhl:M (2.21) BS01 rna ? GO:0000027 ... P0A7K6 37553384
    778157 8bhl:M (2.21) BS02 rna ? GO:0000027 ... P0A7K6 37553384
    778158 8bhl:N (2.21) BS01 rna ? GO:0000027 ... P0A7L3 37553384
    778159 8bhl:O (2.21) BS01 rna ? GO:0002181 ... P0AG48 37553384
    778160 8bhl:P (2.21) BS01 rna ? GO:0002181 ... P61175 37553384
    778161 8bhl:Q (2.21) BS01 rna ? GO:0000027 ... P0ADZ0 37553384
    778162 8bhl:R (2.21) BS01 rna ? GO:0000027 ... P60624 37553384
    778163 8bhl:S (2.21) BS01 rna ? GO:0000027 ... P68919 37553384
    778164 8bhl:T (2.21) BS01 rna ? GO:0000027 ... P0A7L8 37553384
    778165 8bhl:U (2.21) BS01 rna ? GO:0000027 ... P0A7M2 37553384
    778166 8bhl:V (2.21) BS01 rna ? GO:0000027 ... P0A7M6 37553384
    778167 8bhl:W (2.21) BS01 rna ? GO:0000027 ... P0AG51 37553384
    778168 8bhl:a (2.21) BS01 rna ? GO:0000027 ... P0A7N4 37553384
    778169 8bhl:b (2.21) BS01 rna ? GO:0000027 ... P0A7N9 37553384
    778170 8bhl:c (2.21) BS01 rna ? GO:0002181 ... P0A7P5 37553384
    778171 8bhl:d (2.21) BS01 rna ? GO:0002181 ... P0A7Q1 37553384
    778172 8bhl:e (2.21) BS01 rna ? GO:0002181 ... P0A7Q6 37553384
    778173 8bhl:f (2.21) BS01 rna ? GO:0000028 ... P0A7V0 37553384
    778174 8bhl:g (2.21) BS01 rna ? GO:0000028 ... P0A7V3 37553384
    778175 8bhl:h (2.21) BS01 rna ? GO:0000028 ... P0A7V8 37553384
    778176 8bhl:i (2.21) BS01 rna ? GO:0000028 ... P0A7W1 37553384
    778177 8bhl:j (2.21) BS01 rna ? GO:0002181 ... P02358 37553384
    778178 8bhl:k (2.21) BS01 rna ? GO:0000028 ... P02359 37553384
    778179 8bhl:l (2.21) BS01 rna ? GO:0000028 ... P0A7W7 37553384
    778180 8bhl:m (2.21) BS01 rna ? GO:0002181 ... P0A7X3 37553384
    778181 8bhl:m (2.21) BS02 rna ? GO:0002181 ... P0A7X3 37553384
    778182 8bhl:n (2.21) BS01 rna ? GO:0000049 ... P0A7R5 37553384
    778183 8bhl:o (2.21) BS01 rna ? GO:0002181 ... P0A7R9 37553384
    778184 8bhl:p (2.21) BS01 rna ? GO:0000049 ... P0A7S3 37553384
    778185 8bhl:q (2.21) BS01 rna ? GO:0000049 ... P0A7S9 37553384
    778186 8bhl:r (2.21) BS01 rna ? GO:0000028 ... P0AG59 37553384
    778187 8bhl:s (2.21) BS01 rna ? GO:0000028 ... P0ADZ4 37553384
    778188 8bhl:s (2.21) BS02 rna ? GO:0000028 ... P0ADZ4 37553384
    778189 8bhl:t (2.21) BS01 rna ? GO:0000028 ... P0A7T3 37553384
    778190 8bhl:u (2.21) BS01 rna ? GO:0000028 ... P0AG63 37553384
    778191 8bhl:v (2.21) BS01 rna ? GO:0002181 ... P0A7T7 37553384
    778192 8bhl:w (2.21) BS01 rna ? GO:0002181 ... P0A7U3 37553384
    778193 8bhl:x (2.21) BS01 rna ? GO:0000028 ... P0A7U7 37553384
    778194 8bhl:y (2.21) BS01 rna ? GO:0000028 ... P68679 37553384
    778195 8bhm:A (2.95) BS01 R63 ? GO:0004888 ... P31644 37903907
    778196 8bhm:A (2.95) BS02 R63 ? GO:0004888 ... P31644 37903907
    778197 8bhm:B (2.95) BS01 R63 ? GO:0004888 ... P31644 37903907
    778198 8bhm:B (2.95) BS02 R63 ? GO:0004888 ... P31644 37903907
    778199 8bhm:C (2.95) BS01 R63 ? GO:0004888 ... P31644 37903907
    778200 8bhm:C (2.95) BS02 R63 ? GO:0004888 ... P31644 37903907

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).