SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    778201 8bhm:D (2.95) BS01 R63 ? GO:0004888 ... P31644 37903907
    778202 8bhm:D (2.95) BS02 R63 ? GO:0004888 ... P31644 37903907
    778203 8bhm:E (2.95) BS01 R63 ? GO:0004888 ... P31644 37903907
    778204 8bhm:E (2.95) BS02 R63 ? GO:0004888 ... P31644 37903907
    778205 8bhn:A (2.85) BS01 rna ? GO:0000027 ... P60422 37553384
    778206 8bhn:B (2.85) BS01 rna ? GO:0000027 ... P60438 37553384
    778207 8bhn:C (2.85) BS01 rna ? GO:0001070 ... P60723 37553384
    778208 8bhn:D (2.85) BS01 rna ? GO:0000027 ... P62399 37553384
    778209 8bhn:D (2.85) BS02 rna ? GO:0000027 ... P62399 37553384
    778210 8bhn:D (2.85) BS03 rna ? GO:0000027 ... P62399 37553384
    778211 8bhn:E (2.85) BS01 rna ? GO:0000027 ... P0AG55 37553384
    778212 8bhn:F (2.85) BS01 rna ? GO:0002181 ... P0A7R1 37553384
    778213 8bhn:G (2.85) BS01 rna ? GO:0002181 ... P0AA10 37553384
    778214 8bhn:H (2.85) BS01 rna ? GO:0002181 ... P0ADY3 37553384
    778215 8bhn:I (2.85) BS01 rna ? GO:0002181 ... P02413 37553384
    778216 8bhn:J (2.85) BS01 rna ? GO:0000027 ... P0ADY7 37553384
    778217 8bhn:J (2.85) BS02 rna ? GO:0000027 ... P0ADY7 37553384
    778218 8bhn:J (2.85) BS03 rna ? GO:0000027 ... P0ADY7 37553384
    778219 8bhn:K (2.85) BS01 rna ? GO:0000027 ... P0AG44 37553384
    778220 8bhn:L (2.85) BS01 rna ? GO:0002181 ... P0C018 37553384
    778221 8bhn:L (2.85) BS02 rna ? GO:0002181 ... P0C018 37553384
    778222 8bhn:M (2.85) BS01 rna ? GO:0000027 ... P0A7K6 37553384
    778223 8bhn:M (2.85) BS02 rna ? GO:0000027 ... P0A7K6 37553384
    778224 8bhn:N (2.85) BS01 rna ? GO:0000027 ... P0A7L3 37553384
    778225 8bhn:O (2.85) BS01 rna ? GO:0002181 ... P0AG48 37553384
    778226 8bhn:P (2.85) BS01 rna ? GO:0002181 ... P61175 37553384
    778227 8bhn:Q (2.85) BS01 rna ? GO:0000027 ... P0ADZ0 37553384
    778228 8bhn:R (2.85) BS01 rna ? GO:0000027 ... P60624 37553384
    778229 8bhn:S (2.85) BS01 rna ? GO:0000027 ... P68919 37553384
    778230 8bhn:T (2.85) BS01 rna ? GO:0000027 ... P0A7L8 37553384
    778231 8bhn:T (2.85) BS02 rna ? GO:0000027 ... P0A7L8 37553384
    778232 8bhn:U (2.85) BS01 rna ? GO:0000027 ... P0A7M2 37553384
    778233 8bhn:V (2.85) BS01 rna ? GO:0000027 ... P0A7M6 37553384
    778234 8bhn:W (2.85) BS01 rna ? GO:0000027 ... P0AG51 37553384
    778235 8bhn:X (2.85) BS01 rna ? GO:0002181 ... P0A7M9 37553384
    778236 8bhn:X (2.85) BS02 rna ? GO:0002181 ... P0A7M9 37553384
    778237 8bhn:a (2.85) BS01 rna ? GO:0000027 ... P0A7N4 37553384
    778238 8bhn:b (2.85) BS01 rna ? GO:0000027 ... P0A7N9 37553384
    778239 8bhn:c (2.85) BS01 rna ? GO:0002181 ... P0A7P5 37553384
    778240 8bhn:d (2.85) BS01 rna ? GO:0002181 ... P0A7Q1 37553384
    778241 8bhn:e (2.85) BS01 rna ? GO:0002181 ... P0A7Q6 37553384
    778242 8bhn:f (2.85) BS01 rna ? GO:0000028 ... P0A7V0 37553384
    778243 8bhn:g (2.85) BS01 rna ? GO:0000028 ... P0A7V3 37553384
    778244 8bhn:h (2.85) BS01 rna ? GO:0000028 ... P0A7V8 37553384
    778245 8bhn:i (2.85) BS01 rna ? GO:0000028 ... P0A7W1 37553384
    778246 8bhn:j (2.85) BS01 rna ? GO:0002181 ... P02358 37553384
    778247 8bhn:k (2.85) BS01 rna ? GO:0000028 ... P02359 37553384
    778248 8bhn:k (2.85) BS02 rna ? GO:0000028 ... P02359 37553384
    778249 8bhn:l (2.85) BS01 rna ? GO:0000028 ... P0A7W7 37553384
    778250 8bhn:m (2.85) BS01 rna ? GO:0002181 ... P0A7X3 37553384
    778251 8bhn:n (2.85) BS01 rna ? GO:0000049 ... P0A7R5 37553384
    778252 8bhn:o (2.85) BS01 rna ? GO:0002181 ... P0A7R9 37553384
    778253 8bhn:p (2.85) BS01 rna ? GO:0000049 ... P0A7S3 37553384
    778254 8bhn:q (2.85) BS01 rna ? GO:0000049 ... P0A7S9 37553384
    778255 8bhn:r (2.85) BS01 rna ? GO:0000028 ... P0AG59 37553384
    778256 8bhn:s (2.85) BS01 rna ? GO:0000028 ... P0ADZ4 37553384
    778257 8bhn:s (2.85) BS02 rna ? GO:0000028 ... P0ADZ4 37553384
    778258 8bhn:t (2.85) BS01 rna ? GO:0000028 ... P0A7T3 37553384
    778259 8bhn:u (2.85) BS01 rna ? GO:0000028 ... P0AG63 37553384
    778260 8bhn:v (2.85) BS01 rna ? GO:0002181 ... P0A7T7 37553384
    778261 8bhn:w (2.85) BS01 rna ? GO:0002181 ... P0A7U3 37553384
    778262 8bhn:x (2.85) BS01 rna ? GO:0000028 ... P0A7U7 37553384
    778263 8bhn:y (2.85) BS01 rna ? GO:0000028 ... P68679 37553384
    778264 8bho:A (2.93) BS01 QMJ ? GO:0004888 ... P31644 37903907
    778265 8bho:A (2.93) BS02 QMJ ? GO:0004888 ... P31644 37903907
    778266 8bho:B (2.93) BS01 QMJ ? GO:0004888 ... P31644 37903907
    778267 8bho:B (2.93) BS02 QMJ ? GO:0004888 ... P31644 37903907
    778268 8bho:C (2.93) BS01 QMJ ? GO:0004888 ... P31644 37903907
    778269 8bho:C (2.93) BS02 QMJ ? GO:0004888 ... P31644 37903907
    778270 8bho:D (2.93) BS01 QMJ ? GO:0004888 ... P31644 37903907
    778271 8bho:D (2.93) BS02 QMJ ? GO:0004888 ... P31644 37903907
    778272 8bho:E (2.93) BS01 QMJ ? GO:0004888 ... P31644 37903907
    778273 8bho:E (2.93) BS02 QMJ ? GO:0004888 ... P31644 37903907
    778274 8bhp:A (2.37) BS01 rna ? GO:0000027 ... P60422 37553384
    778275 8bhp:B (2.37) BS01 rna ? GO:0000027 ... P60438 37553384
    778276 8bhp:C (2.37) BS01 rna ? GO:0001070 ... P60723 37553384
    778277 8bhp:D (2.37) BS01 rna ? GO:0000027 ... P62399 37553384
    778278 8bhp:D (2.37) BS02 rna ? GO:0000027 ... P62399 37553384
    778279 8bhp:D (2.37) BS03 rna ? GO:0000027 ... P62399 37553384
    778280 8bhp:E (2.37) BS01 rna ? GO:0000027 ... P0AG55 37553384
    778281 8bhp:F (2.37) BS01 rna ? GO:0002181 ... P0A7R1 37553384
    778282 8bhp:G (2.37) BS01 rna ? GO:0002181 ... P0AA10 37553384
    778283 8bhp:H (2.37) BS01 rna ? GO:0002181 ... P0ADY3 37553384
    778284 8bhp:H (2.37) BS02 rna ? GO:0002181 ... P0ADY3 37553384
    778285 8bhp:I (2.37) BS01 rna ? GO:0002181 ... P02413 37553384
    778286 8bhp:J (2.37) BS01 rna ? GO:0000027 ... P0ADY7 37553384
    778287 8bhp:K (2.37) BS01 rna ? GO:0000027 ... P0AG44 37553384
    778288 8bhp:L (2.37) BS01 rna ? GO:0002181 ... P0C018 37553384
    778289 8bhp:L (2.37) BS02 rna ? GO:0002181 ... P0C018 37553384
    778290 8bhp:M (2.37) BS01 rna ? GO:0000027 ... P0A7K6 37553384
    778291 8bhp:M (2.37) BS02 rna ? GO:0000027 ... P0A7K6 37553384
    778292 8bhp:N (2.37) BS01 rna ? GO:0000027 ... P0A7L3 37553384
    778293 8bhp:O (2.37) BS01 rna ? GO:0002181 ... P0AG48 37553384
    778294 8bhp:P (2.37) BS01 rna ? GO:0002181 ... P61175 37553384
    778295 8bhp:Q (2.37) BS01 rna ? GO:0000027 ... P0ADZ0 37553384
    778296 8bhp:R (2.37) BS01 rna ? GO:0000027 ... P60624 37553384
    778297 8bhp:S (2.37) BS01 rna ? GO:0000027 ... P68919 37553384
    778298 8bhp:T (2.37) BS01 rna ? GO:0000027 ... P0A7L8 37553384
    778299 8bhp:U (2.37) BS01 rna ? GO:0000027 ... P0A7M2 37553384
    778300 8bhp:V (2.37) BS01 rna ? GO:0000027 ... P0A7M6 37553384
    778301 8bhp:W (2.37) BS01 rna ? GO:0000027 ... P0AG51 37553384
    778302 8bhp:X (2.37) BS01 rna ? GO:0002181 ... P0A7M9 37553384
    778303 8bhp:X (2.37) BS02 rna ? GO:0002181 ... P0A7M9 37553384
    778304 8bhp:a (2.37) BS01 rna ? GO:0000027 ... P0A7N4 37553384
    778305 8bhp:b (2.37) BS01 rna ? GO:0000027 ... P0A7N9 37553384
    778306 8bhp:c (2.37) BS01 rna ? GO:0002181 ... P0A7P5 37553384
    778307 8bhp:d (2.37) BS01 rna ? GO:0002181 ... P0A7Q1 37553384
    778308 8bhp:e (2.37) BS01 rna ? GO:0002181 ... P0A7Q6 37553384
    778309 8bhp:f (2.37) BS01 rna ? GO:0000028 ... P0A7V0 37553384
    778310 8bhp:g (2.37) BS01 rna ? GO:0000028 ... P0A7V3 37553384
    778311 8bhp:h (2.37) BS01 rna ? GO:0000028 ... P0A7V8 37553384
    778312 8bhp:i (2.37) BS01 rna ? GO:0000028 ... P0A7W1 37553384
    778313 8bhp:j (2.37) BS01 rna ? GO:0002181 ... P02358 37553384
    778314 8bhp:k (2.37) BS01 rna ? GO:0000028 ... P02359 37553384
    778315 8bhp:l (2.37) BS01 rna ? GO:0000028 ... P0A7W7 37553384
    778316 8bhp:m (2.37) BS01 rna ? GO:0002181 ... P0A7X3 37553384
    778317 8bhp:n (2.37) BS01 rna ? GO:0000049 ... P0A7R5 37553384
    778318 8bhp:o (2.37) BS01 rna ? GO:0002181 ... P0A7R9 37553384
    778319 8bhp:p (2.37) BS01 rna ? GO:0000049 ... P0A7S3 37553384
    778320 8bhp:q (2.37) BS01 rna ? GO:0000049 ... P0A7S9 37553384
    778321 8bhp:r (2.37) BS01 rna ? GO:0000028 ... P0AG59 37553384
    778322 8bhp:s (2.37) BS01 rna ? GO:0000028 ... P0ADZ4 37553384
    778323 8bhp:s (2.37) BS02 rna ? GO:0000028 ... P0ADZ4 37553384
    778324 8bhp:t (2.37) BS01 rna ? GO:0000028 ... P0A7T3 37553384
    778325 8bhp:u (2.37) BS01 rna ? GO:0000028 ... P0AG63 37553384
    778326 8bhp:v (2.37) BS01 rna ? GO:0002181 ... P0A7T7 37553384
    778327 8bhp:w (2.37) BS01 rna ? GO:0002181 ... P0A7U3 37553384
    778328 8bhp:x (2.37) BS01 rna ? GO:0000028 ... P0A7U7 37553384
    778329 8bhp:y (2.37) BS01 rna ? GO:0000028 ... P68679 37553384
    778330 8bhq:A (3.3) BS01 QR3 ? GO:0004888 ... P31644 37903907
    778331 8bhq:A (3.3) BS02 QR3 ? GO:0004888 ... P31644 37903907
    778332 8bhq:B (3.3) BS01 QR3 ? GO:0004888 ... P31644 37903907
    778333 8bhq:B (3.3) BS02 QR3 ? GO:0004888 ... P31644 37903907
    778334 8bhq:C (3.3) BS01 QR3 ? GO:0004888 ... P31644 37903907
    778335 8bhq:C (3.3) BS02 QR3 ? GO:0004888 ... P31644 37903907
    778336 8bhq:D (3.3) BS01 QR3 ? GO:0004888 ... P31644 37903907
    778337 8bhq:D (3.3) BS02 QR3 ? GO:0004888 ... P31644 37903907
    778338 8bhq:E (3.3) BS01 QR3 ? GO:0004888 ... P31644 37903907
    778339 8bhq:E (3.3) BS02 QR3 ? GO:0004888 ... P31644 37903907
    778340 8bhr:A (3.38) BS01 QM7 ? GO:0004888 ... P31644 37903907
    778341 8bhr:A (3.38) BS02 QM7 ? GO:0004888 ... P31644 37903907
    778342 8bhr:B (3.38) BS01 QM7 ? GO:0004888 ... P31644 37903907
    778343 8bhr:B (3.38) BS02 QM7 ? GO:0004888 ... P31644 37903907
    778344 8bhr:C (3.38) BS01 QM7 ? GO:0004888 ... P31644 37903907
    778345 8bhr:C (3.38) BS02 QM7 ? GO:0004888 ... P31644 37903907
    778346 8bhr:D (3.38) BS01 QM7 ? GO:0004888 ... P31644 37903907
    778347 8bhr:E (3.38) BS01 QM7 ? GO:0004888 ... P31644 37903907
    778348 8bhr:E (3.38) BS02 QM7 ? GO:0004888 ... P31644 37903907
    778349 8bhs:A (3.24) BS01 QK9 ? GO:0004888 ... P31644 37903907
    778350 8bhs:A (3.24) BS02 QK9 ? GO:0004888 ... P31644 37903907
    778351 8bhs:B (3.24) BS01 QK9 ? GO:0004888 ... P31644 37903907
    778352 8bhs:B (3.24) BS02 QK9 ? GO:0004888 ... P31644 37903907
    778353 8bhs:C (3.24) BS01 QK9 ? GO:0004888 ... P31644 37903907
    778354 8bhs:C (3.24) BS02 QK9 ? GO:0004888 ... P31644 37903907
    778355 8bhs:D (3.24) BS01 QK9 ? GO:0004888 ... P31644 37903907
    778356 8bhs:D (3.24) BS02 QK9 ? GO:0004888 ... P31644 37903907
    778357 8bhs:E (3.24) BS01 QK9 ? GO:0004888 ... P31644 37903907
    778358 8bhs:E (3.24) BS02 QK9 ? GO:0004888 ... P31644 37903907
    778359 8bht:A (3.1) BS01 ATP 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    778360 8bht:A (3.1) BS02 CLR 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    778361 8bht:A (3.1) BS03 R1H 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    778362 8bht:B (3.1) BS01 ATP 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    778363 8bht:B (3.1) BS02 CLR 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    778364 8bht:B (3.1) BS03 R1H 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    778365 8bhv:A (4.51) BS01 dna 2.7.11.1 GO:0000460 ... P78527 37256950
    778366 8bhv:A (4.51) BS02 dna 2.7.11.1 GO:0000460 ... P78527 37256950
    778367 8bhv:F (4.51) BS01 dna 2.7.11.1 GO:0000460 ... P78527 37256950
    778368 8bhv:F (4.51) BS02 dna 2.7.11.1 GO:0000460 ... P78527 37256950
    778369 8bhv:a (4.51) BS01 peptide 3.6.4.-
    4.2.99.-
    GO:0000723 ... P12956 37256950
    778370 8bhv:a (4.51) BS02 dna 3.6.4.-
    4.2.99.-
    GO:0000723 ... P12956 37256950
    778371 8bhv:a (4.51) BS03 dna 3.6.4.-
    4.2.99.-
    GO:0000723 ... P12956 37256950
    778372 8bhv:b (4.51) BS01 dna 3.6.4.- GO:0000723 ... P13010 37256950
    778373 8bhv:b (4.51) BS02 dna 3.6.4.- GO:0000723 ... P13010 37256950
    778374 8bhv:h (4.51) BS01 peptide 3.6.4.-
    4.2.99.-
    GO:0000723 ... P12956 37256950
    778375 8bhv:h (4.51) BS02 dna 3.6.4.-
    4.2.99.-
    GO:0000723 ... P12956 37256950
    778376 8bhv:j (4.51) BS01 dna 3.6.4.- GO:0000723 ... P13010 37256950
    778377 8bhv:j (4.51) BS02 dna 3.6.4.- GO:0000723 ... P13010 37256950
    778378 8bhx:A (1.25) BS01 FE 1.15.1.1 GO:0004784 ... Q47RC2 37725277
    778379 8bhx:B (1.25) BS01 FE 1.15.1.1 GO:0004784 ... Q47RC2 37725277
    778380 8bhy:A (5.33) BS01 dna 2.7.11.1 GO:0000460 ... P78527 37256950
    778381 8bhy:B (5.33) BS01 dna 3.6.4.-
    4.2.99.-
    GO:0000723 ... P12956 37256950
    778382 8bhy:B (5.33) BS02 dna 3.6.4.-
    4.2.99.-
    GO:0000723 ... P12956 37256950
    778383 8bhy:C (5.33) BS01 dna 3.6.4.- GO:0000723 ... P13010 37256950
    778384 8bhy:C (5.33) BS02 dna 3.6.4.- GO:0000723 ... P13010 37256950
    778385 8bhy:C (5.33) BS03 peptide 3.6.4.- GO:0000723 ... P13010 37256950
    778386 8bhy:L (5.33) BS01 dna 3.6.4.- GO:0000723 ... P13010 37256950
    778387 8bhy:L (5.33) BS02 dna 3.6.4.- GO:0000723 ... P13010 37256950
    778388 8bhy:L (5.33) BS03 peptide 3.6.4.- GO:0000723 ... P13010 37256950
    778389 8bhy:S (5.33) BS01 dna 2.7.11.1 GO:0000460 ... P78527 37256950
    778390 8bhy:S (5.33) BS02 dna 2.7.11.1 GO:0000460 ... P78527 37256950
    778391 8bhy:T (5.33) BS01 dna 3.6.4.-
    4.2.99.-
    GO:0000723 ... P12956 37256950
    778392 8bhy:T (5.33) BS02 dna 3.6.4.-
    4.2.99.-
    GO:0000723 ... P12956 37256950
    778393 8bi0:A (3.2) BS01 ATP 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    778394 8bi0:A (3.2) BS02 CLR 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    778395 8bi0:A (3.2) BS03 CLR 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    778396 8bi0:A (3.2) BS04 MG 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    778397 8bi0:A (3.2) BS05 R1H 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    778398 8bi0:B (3.2) BS01 ATP 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    778399 8bi0:B (3.2) BS02 CLR 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    778400 8bi0:B (3.2) BS03 CLR 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).