SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    778401 8c29:c (2.785) BS15 LNL ? GO:0005737 ... R4ZGZ0 37550369
    778402 8c29:c (2.785) BS16 LNL ? GO:0005737 ... R4ZGZ0 37550369
    778403 8c29:c (2.785) BS17 LNL ? GO:0005737 ... R4ZGZ0 37550369
    778404 8c29:c (2.785) BS18 LNL ? GO:0005737 ... R4ZGZ0 37550369
    778405 8c29:c (2.785) BS19 CLA ? GO:0005737 ... R4ZGZ0 37550369
    778406 8c29:c (2.785) BS20 VIV ? GO:0005737 ... R4ZGZ0 37550369
    778407 8c29:c (2.785) BS21 CLA ? GO:0005737 ... R4ZGZ0 37550369
    778408 8c29:d (2.785) BS01 FE2 1.10.3.9 GO:0005506 ... R4ZGX6 37550369
    778409 8c29:d (2.785) BS02 CLA 1.10.3.9 GO:0005506 ... R4ZGX6 37550369
    778410 8c29:d (2.785) BS03 CLA 1.10.3.9 GO:0005506 ... R4ZGX6 37550369
    778411 8c29:d (2.785) BS04 PHO 1.10.3.9 GO:0005506 ... R4ZGX6 37550369
    778412 8c29:d (2.785) BS05 CLA 1.10.3.9 GO:0005506 ... R4ZGX6 37550369
    778413 8c29:d (2.785) BS06 BCT 1.10.3.9 GO:0005506 ... R4ZGX6 37550369
    778414 8c29:d (2.785) BS07 PHO 1.10.3.9 GO:0005506 ... R4ZGX6 37550369
    778415 8c29:d (2.785) BS08 CLA 1.10.3.9 GO:0005506 ... R4ZGX6 37550369
    778416 8c29:d (2.785) BS09 CLA 1.10.3.9 GO:0005506 ... R4ZGX6 37550369
    778417 8c29:e (2.785) BS01 peptide ? GO:0005506 ... R4ZGW6 37550369
    778418 8c29:e (2.785) BS02 HEM ? GO:0005506 ... R4ZGW6 37550369
    778419 8c29:f (2.785) BS01 HEM ? GO:0005506 ... R4ZGT7 37550369
    778420 8c29:g (2.785) BS01 CHL ? GO:0009507 ... Q40771 37550369
    778421 8c29:g (2.785) BS02 CLA ? GO:0009507 ... Q40771 37550369
    778422 8c29:g (2.785) BS03 CLA ? GO:0009507 ... Q40771 37550369
    778423 8c29:g (2.785) BS04 CLA ? GO:0009507 ... Q40771 37550369
    778424 8c29:g (2.785) BS05 CHL ? GO:0009507 ... Q40771 37550369
    778425 8c29:g (2.785) BS06 CHL ? GO:0009507 ... Q40771 37550369
    778426 8c29:g (2.785) BS07 CHL ? GO:0009507 ... Q40771 37550369
    778427 8c29:g (2.785) BS08 CHL ? GO:0009507 ... Q40771 37550369
    778428 8c29:g (2.785) BS09 CHL ? GO:0009507 ... Q40771 37550369
    778429 8c29:g (2.785) BS10 CLA ? GO:0009507 ... Q40771 37550369
    778430 8c29:g (2.785) BS11 CLA ? GO:0009507 ... Q40771 37550369
    778431 8c29:g (2.785) BS12 CLA ? GO:0009507 ... Q40771 37550369
    778432 8c29:g (2.785) BS13 CLA ? GO:0009507 ... Q40771 37550369
    778433 8c29:g (2.785) BS14 CLA ? GO:0009507 ... Q40771 37550369
    778434 8c29:g (2.785) BS15 CHL ? GO:0009507 ... Q40771 37550369
    778435 8c29:h (2.785) BS01 CLA ? GO:0009507 ... R4ZGS7 37550369
    778436 8c29:h (2.785) BS02 CLA ? GO:0009507 ... R4ZGS7 37550369
    778437 8c29:h (2.785) BS03 CLA ? GO:0009507 ... R4ZGS7 37550369
    778438 8c29:i (2.785) BS01 CLA ? GO:0005737 ... R4ZGS4 37550369
    778439 8c29:k (2.785) BS01 CLA ? GO:0005737 ... R4ZGX8 37550369
    778440 8c29:n (2.785) BS01 CHL ? GO:0009507 ... Q40771 37550369
    778441 8c29:n (2.785) BS02 CHL ? GO:0009507 ... Q40771 37550369
    778442 8c29:n (2.785) BS03 CLA ? GO:0009507 ... Q40771 37550369
    778443 8c29:n (2.785) BS04 CLA ? GO:0009507 ... Q40771 37550369
    778444 8c29:n (2.785) BS05 CLA ? GO:0009507 ... Q40771 37550369
    778445 8c29:n (2.785) BS06 CHL ? GO:0009507 ... Q40771 37550369
    778446 8c29:n (2.785) BS07 CHL ? GO:0009507 ... Q40771 37550369
    778447 8c29:n (2.785) BS08 CHL ? GO:0009507 ... Q40771 37550369
    778448 8c29:n (2.785) BS09 CHL ? GO:0009507 ... Q40771 37550369
    778449 8c29:n (2.785) BS10 CHL ? GO:0009507 ... Q40771 37550369
    778450 8c29:n (2.785) BS11 CLA ? GO:0009507 ... Q40771 37550369
    778451 8c29:n (2.785) BS12 CLA ? GO:0009507 ... Q40771 37550369
    778452 8c29:n (2.785) BS13 CLA ? GO:0009507 ... Q40771 37550369
    778453 8c29:n (2.785) BS14 CLA ? GO:0009507 ... Q40771 37550369
    778454 8c29:n (2.785) BS15 CLA ? GO:0009507 ... Q40771 37550369
    778455 8c29:r (2.785) BS01 CHL ? GO:0009765 ... A9NKX0 37550369
    778456 8c29:r (2.785) BS02 CLA ? GO:0009765 ... A9NKX0 37550369
    778457 8c29:r (2.785) BS03 CLA ? GO:0009765 ... A9NKX0 37550369
    778458 8c29:r (2.785) BS04 CLA ? GO:0009765 ... A9NKX0 37550369
    778459 8c29:r (2.785) BS05 CLA ? GO:0009765 ... A9NKX0 37550369
    778460 8c29:r (2.785) BS06 CHL ? GO:0009765 ... A9NKX0 37550369
    778461 8c29:r (2.785) BS07 CHL ? GO:0009765 ... A9NKX0 37550369
    778462 8c29:r (2.785) BS08 CHL ? GO:0009765 ... A9NKX0 37550369
    778463 8c29:r (2.785) BS09 CLA ? GO:0009765 ... A9NKX0 37550369
    778464 8c29:r (2.785) BS10 CLA ? GO:0009765 ... A9NKX0 37550369
    778465 8c29:r (2.785) BS11 CLA ? GO:0009765 ... A9NKX0 37550369
    778466 8c29:r (2.785) BS12 CLA ? GO:0009765 ... A9NKX0 37550369
    778467 8c29:r (2.785) BS13 CLA ? GO:0009765 ... A9NKX0 37550369
    778468 8c29:s (2.785) BS01 CLA ? GO:0009507 ... A9NKM0 37550369
    778469 8c29:s (2.785) BS02 CHL ? GO:0009507 ... A9NKM0 37550369
    778470 8c29:s (2.785) BS03 CLA ? GO:0009507 ... A9NKM0 37550369
    778471 8c29:s (2.785) BS04 CLA ? GO:0009507 ... A9NKM0 37550369
    778472 8c29:s (2.785) BS05 CLA ? GO:0009507 ... A9NKM0 37550369
    778473 8c29:s (2.785) BS06 CHL ? GO:0009507 ... A9NKM0 37550369
    778474 8c29:s (2.785) BS07 CHL ? GO:0009507 ... A9NKM0 37550369
    778475 8c29:s (2.785) BS08 CLA ? GO:0009507 ... A9NKM0 37550369
    778476 8c29:s (2.785) BS09 CLA ? GO:0009507 ... A9NKM0 37550369
    778477 8c29:s (2.785) BS10 CLA ? GO:0009507 ... A9NKM0 37550369
    778478 8c29:s (2.785) BS11 CLA ? GO:0009507 ... A9NKM0 37550369
    778479 8c29:s (2.785) BS12 CLA ? GO:0009507 ... A9NKM0 37550369
    778480 8c29:s (2.785) BS13 CLA ? GO:0009507 ... A9NKM0 37550369
    778481 8c29:t (2.785) BS01 LNL ? GO:0005737 ... R4ZGU2 37550369
    778482 8c29:w (2.785) BS01 CLA ? GO:0009507 ... A9NLC2 37550369
    778483 8c29:y (2.785) BS01 CHL ? GO:0009507 ... Q40771 37550369
    778484 8c29:y (2.785) BS02 CHL ? GO:0009507 ... Q40771 37550369
    778485 8c29:y (2.785) BS03 CHL ? GO:0009507 ... Q40771 37550369
    778486 8c29:y (2.785) BS04 VIV ? GO:0009507 ... Q40771 37550369
    778487 8c29:y (2.785) BS05 CHL ? GO:0009507 ... Q40771 37550369
    778488 8c29:y (2.785) BS06 CLA ? GO:0009507 ... Q40771 37550369
    778489 8c29:y (2.785) BS07 CLA ? GO:0009507 ... Q40771 37550369
    778490 8c29:y (2.785) BS08 CHL ? GO:0009507 ... Q40771 37550369
    778491 8c29:y (2.785) BS09 CHL ? GO:0009507 ... Q40771 37550369
    778492 8c29:y (2.785) BS10 CHL ? GO:0009507 ... Q40771 37550369
    778493 8c29:y (2.785) BS11 CHL ? GO:0009507 ... Q40771 37550369
    778494 8c29:y (2.785) BS12 CLA ? GO:0009507 ... Q40771 37550369
    778495 8c29:y (2.785) BS13 CLA ? GO:0009507 ... Q40771 37550369
    778496 8c29:y (2.785) BS14 CLA ? GO:0009507 ... Q40771 37550369
    778497 8c29:y (2.785) BS15 CLA ? GO:0009507 ... Q40771 37550369
    778498 8c29:y (2.785) BS16 CLA ? GO:0009507 ... Q40771 37550369
    778499 8c2d:AAA (2.15) BS01 peptide ? GO:0000122 ... P31947 36774661
    778500 8c2e:A (2.2) BS01 peptide ? GO:0000122 ... P31947 38040731
    778501 8c2e:A (2.2) BS02 TJI ? GO:0000122 ... P31947 38040731
    778502 8c2f:A (2.3) BS01 peptide ? GO:0000122 ... P31947 38040731
    778503 8c2g:A (1.6) BS01 peptide ? GO:0000122 ... P31947 37350830
    778504 8c2g:A (1.6) BS02 T85 ? GO:0000122 ... P31947 37350830
    778505 8c2g:A (1.6) BS03 MG ? GO:0000122 ... P31947 37350830
    778506 8c2o:A (2.35) BS01 ZN 3.5.1.28 GO:0008270 ... P36548 37276423
    778507 8c2o:B (2.35) BS01 ZN 3.5.1.28 GO:0008270 ... P36548 37276423
    778508 8c2p:A (1.85) BS01 peptide 2.7.7.48
    3.4.22.28
    3.4.22.46
    3.6.1.15
    GO:0003723 ... P03311 37126532
    778509 8c2q:A (-1.00) BS01 AG ? N/A Q9ZHD1 37394004
    778510 8c2s:B (3.9) BS01 SF4 7.1.1.2 GO:0003954 ... Q9DC70 38177503
    778511 8c2s:D (3.9) BS01 SF4 7.1.1.2 GO:0003954 ... Q91WD5 38177503
    778512 8c2s:E (3.9) BS01 FES 7.1.1.2 GO:0005739 ... Q9D6J6 38177503
    778513 8c2s:F (3.9) BS01 SF4 7.1.1.2 GO:0005515 ... Q91YT0 38177503
    778514 8c2s:F (3.9) BS02 FMN 7.1.1.2 GO:0005515 ... Q91YT0 38177503
    778515 8c2s:G (3.9) BS01 SF4 7.1.1.2 GO:0005515 ... Q91VD9 38177503
    778516 8c2s:G (3.9) BS02 SF4 7.1.1.2 GO:0005515 ... Q91VD9 38177503
    778517 8c2s:G (3.9) BS03 FES 7.1.1.2 GO:0005515 ... Q91VD9 38177503
    778518 8c2s:I (3.9) BS01 SF4 7.1.1.2 GO:0003954 ... Q8K3J1 38177503
    778519 8c2s:I (3.9) BS02 SF4 7.1.1.2 GO:0003954 ... Q8K3J1 38177503
    778520 8c2s:O (3.9) BS01 GTP ? GO:0005739 ... Q99LC3 38177503
    778521 8c2s:P (3.9) BS01 NAP ? GO:0003954 ... Q9DC69 38177503
    778522 8c2s:R (3.9) BS01 ZN ? GO:0001822 ... P52503 38177503
    778523 8c2s:T (3.9) BS01 EHZ ? GO:0005654 ... Q9CR21 38177503
    778524 8c2s:U (3.9) BS01 EHZ ? GO:0005654 ... Q9CR21 38177503
    778525 8c2s:W (3.9) BS01 EHZ ? GO:0003674 ... Q9CQZ5 38177503
    778526 8c2s:n (3.9) BS01 EHZ ? GO:0005739 ... Q9CQJ8 38177503
    778527 8c2y:A (1.46) BS01 peptide ? GO:0000122 ... P31947 36774661
    778528 8c2z:A (1.91) BS01 QS0 2.7.12.1 GO:0004672 ... Q9Y463 N/A
    778529 8c2z:A (1.91) BS02 MN 2.7.12.1 GO:0004672 ... Q9Y463 N/A
    778530 8c2z:A (1.91) BS03 MN 2.7.12.1 GO:0004672 ... Q9Y463 N/A
    778531 8c30:AAA (1.4) BS01 peptide ? GO:0000122 ... P31947 36774661
    778532 8c30:AAA (1.4) BS02 463 ? GO:0000122 ... P31947 36774661
    778533 8c31:A (1.8) BS01 B12 ? GO:0031419 ... Q746J7 37604813
    778534 8c31:B (1.8) BS01 B12 ? GO:0031419 ... Q746J7 37604813
    778535 8c31:C (1.8) BS01 B12 ? GO:0031419 ... Q746J7 37604813
    778536 8c31:D (1.8) BS01 B12 ? GO:0031419 ... Q746J7 37604813
    778537 8c32:A (2.2) BS01 B12 ? GO:0031419 ... Q746J7 37604813
    778538 8c32:B (2.2) BS01 B12 ? GO:0031419 ... Q746J7 37604813
    778539 8c32:C (2.2) BS01 B12 ? GO:0031419 ... Q746J7 37604813
    778540 8c32:D (2.2) BS01 B12 ? GO:0031419 ... Q746J7 37604813
    778541 8c33:A (2.25) BS01 B12 ? GO:0031419 ... Q746J7 37604813
    778542 8c33:B (2.25) BS01 B12 ? GO:0031419 ... Q746J7 37604813
    778543 8c33:C (2.25) BS01 B12 ? GO:0031419 ... Q746J7 37604813
    778544 8c33:D (2.25) BS01 B12 ? GO:0031419 ... Q746J7 37604813
    778545 8c34:A (1.82) BS01 B12 ? GO:0031419 ... Q746J7 37604813
    778546 8c34:B (1.82) BS01 B12 ? GO:0031419 ... Q746J7 37604813
    778547 8c34:C (1.82) BS01 B12 ? GO:0031419 ... Q746J7 37604813
    778548 8c34:D (1.82) BS01 B12 ? GO:0031419 ... Q746J7 37604813
    778549 8c35:A (2.1) BS01 B12 ? GO:0031419 ... Q746J7 37604813
    778550 8c35:B (2.1) BS01 B12 ? GO:0031419 ... Q746J7 37604813
    778551 8c35:C (2.1) BS01 B12 ? GO:0031419 ... Q746J7 37604813
    778552 8c35:D (2.1) BS01 B12 ? GO:0031419 ... Q746J7 37604813
    778553 8c36:A (2.0) BS01 B12 ? GO:0031419 ... Q746J7 37604813
    778554 8c36:B (2.0) BS01 B12 ? GO:0031419 ... Q746J7 37604813
    778555 8c36:C (2.0) BS01 B12 ? GO:0031419 ... Q746J7 37604813
    778556 8c36:D (2.0) BS01 B12 ? GO:0031419 ... Q746J7 37604813
    778557 8c37:A (2.15) BS01 B12 ? GO:0031419 ... Q746J7 37604813
    778558 8c37:B (2.15) BS01 B12 ? GO:0031419 ... Q746J7 37604813
    778559 8c37:C (2.15) BS01 B12 ? GO:0031419 ... Q746J7 37604813
    778560 8c37:D (2.15) BS01 B12 ? GO:0031419 ... Q746J7 37604813
    778561 8c3a:0 (3.0) BS01 rna ? GO:0002181 ... A0A1D8PLC9 N/A
    778562 8c3a:0 (3.0) BS02 rna ? GO:0002181 ... A0A1D8PLC9 N/A
    778563 8c3a:12 (3.0) BS01 rna ? GO:0003735 ... Q5AJF7 N/A
    778564 8c3a:2 (3.0) BS01 rna ? GO:0003735 ... A0A1D8PGY0 N/A
    778565 8c3a:2 (3.0) BS02 rna ? GO:0003735 ... A0A1D8PGY0 N/A
    778566 8c3a:5 (3.0) BS01 rna ? GO:0002181 ... A0A1D8PM41 N/A
    778567 8c3a:6 (3.0) BS01 rna ? GO:0003735 ... A0A1D8PPT5 N/A
    778568 8c3a:7 (3.0) BS01 rna ? GO:0002181 ... Q5A6A1 N/A
    778569 8c3a:7 (3.0) BS02 rna ? GO:0002181 ... Q5A6A1 N/A
    778570 8c3a:8 (3.0) BS01 rna ? GO:0003735 ... A0A1D8PPS1 N/A
    778571 8c3a:8 (3.0) BS02 rna ? GO:0003735 ... A0A1D8PPS1 N/A
    778572 8c3a:9 (3.0) BS01 rna ? GO:0002181 ... A0A1D8PCQ5 N/A
    778573 8c3a:9 (3.0) BS02 rna ? GO:0002181 ... A0A1D8PCQ5 N/A
    778574 8c3a:AA (3.0) BS01 rna ? GO:0003735 ... Q9P843 N/A
    778575 8c3a:AB (3.0) BS01 rna ? GO:0003723 ... A0A1D8PSC5 N/A
    778576 8c3a:AB (3.0) BS02 MG ? GO:0003723 ... A0A1D8PSC5 N/A
    778577 8c3a:AC (3.0) BS01 rna ? GO:0002181 ... A0A1D8PF57 N/A
    778578 8c3a:AD (3.0) BS01 rna ? GO:0003723 ... A0A1D8PM75 N/A
    778579 8c3a:AE (3.0) BS01 rna ? GO:0002181 ... A0A8H6F1M1 N/A
    778580 8c3a:AE (3.0) BS02 MG ? GO:0002181 ... A0A8H6F1M1 N/A
    778581 8c3a:AF (3.0) BS01 rna ? GO:0003735 ... A0A1D8PPN6 N/A
    778582 8c3a:AF (3.0) BS02 MG ? GO:0003735 ... A0A1D8PPN6 N/A
    778583 8c3a:AF (3.0) BS03 MG ? GO:0003735 ... A0A1D8PPN6 N/A
    778584 8c3a:AG (3.0) BS01 rna ? GO:0002181 ... A0A1D8PHH4 N/A
    778585 8c3a:AG (3.0) BS02 MG ? GO:0002181 ... A0A1D8PHH4 N/A
    778586 8c3a:AH (3.0) BS01 rna ? GO:0003735 ... A0A1D8PDZ1 N/A
    778587 8c3a:AH (3.0) BS02 MG ? GO:0003735 ... A0A1D8PDZ1 N/A
    778588 8c3a:AH (3.0) BS03 ZN ? GO:0003735 ... A0A1D8PDZ1 N/A
    778589 8c3a:AI (3.0) BS01 rna ? GO:0000463 ... A0A1D8PK30 N/A
    778590 8c3a:AI (3.0) BS02 rna ? GO:0000463 ... A0A1D8PK30 N/A
    778591 8c3a:AJ (3.0) BS01 rna ? GO:0002181 ... A0A1D8PH21 N/A
    778592 8c3a:AK (3.0) BS01 rna ? GO:0003723 ... A0A1D8PF45 N/A
    778593 8c3a:AK (3.0) BS02 rna ? GO:0003723 ... A0A1D8PF45 N/A
    778594 8c3a:AK (3.0) BS03 ZN ? GO:0003723 ... A0A1D8PF45 N/A
    778595 8c3a:AL (3.0) BS01 rna ? GO:0003735 ... A0A1D8PG16 N/A
    778596 8c3a:AM (3.0) BS01 rna ? GO:0003735 ... A0A1D8PDT4 N/A
    778597 8c3a:AM (3.0) BS02 rna ? GO:0003735 ... A0A1D8PDT4 N/A
    778598 8c3a:AN (3.0) BS01 rna ? GO:0003735 ... A0A1D8PL68 N/A
    778599 8c3a:AN (3.0) BS02 ZN ? GO:0003735 ... A0A1D8PL68 N/A
    778600 8c3a:AP (3.0) BS01 rna ? GO:0003735 ... A0A1D8PEV4 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).