SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    778401 8bi0:B (3.2) BS04 R1H 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    778402 8bi0:B (3.2) BS05 MG 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    778403 8bi2:A (1.508) BS01 QR7 2.7.10.2 GO:0004672 ... P43405 37270074
    778404 8bi5:A (2.5) BS01 MG 2.7.1.32
    2.7.1.82
    GO:0004103 ... P35790 N/A
    778405 8bi5:A (2.5) BS02 QQS 2.7.1.32
    2.7.1.82
    GO:0004103 ... P35790 N/A
    778406 8bi5:B (2.5) BS01 MG 2.7.1.32
    2.7.1.82
    GO:0004103 ... P35790 N/A
    778407 8bi5:B (2.5) BS02 QQS 2.7.1.32
    2.7.1.82
    GO:0004103 ... P35790 N/A
    778408 8bi6:A (2.4) BS01 MG 2.7.1.32
    2.7.1.82
    GO:0004103 ... P35790 N/A
    778409 8bi6:A (2.4) BS02 CIQ 2.7.1.32
    2.7.1.82
    GO:0004103 ... P35790 N/A
    778410 8bi6:B (2.4) BS01 MG 2.7.1.32
    2.7.1.82
    GO:0004103 ... P35790 N/A
    778411 8bi6:B (2.4) BS02 CIQ 2.7.1.32
    2.7.1.82
    GO:0004103 ... P35790 N/A
    778412 8bi7:A (1.4) BS01 peptide ? GO:0001836 ... P31947 36926879
    778413 8bi7:A (1.4) BS02 MG ? GO:0001836 ... P31947 36926879
    778414 8bia:A (2.4) BS01 peptide ? N/A Q14160 N/A
    778415 8bib:A (2.3) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    778416 8bib:A (2.3) BS02 QOI ? GO:0008168 ... Q7MY08 36963398
    778417 8bib:B (2.3) BS01 CO3 ? GO:0008168 ... Q7MY08 36963398
    778418 8bib:B (2.3) BS02 SAH ? GO:0008168 ... Q7MY08 36963398
    778419 8bib:B (2.3) BS03 QOI ? GO:0008168 ... Q7MY08 36963398
    778420 8bib:C (2.3) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    778421 8bib:C (2.3) BS02 QOI ? GO:0008168 ... Q7MY08 36963398
    778422 8bib:C (2.3) BS03 CO3 ? GO:0008168 ... Q7MY08 36963398
    778423 8bib:D (2.3) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    778424 8bib:D (2.3) BS02 QOI ? GO:0008168 ... Q7MY08 36963398
    778425 8bic:A (1.85) BS01 SAH ? GO:0008168 ... Q7MY07 36963398
    778426 8bic:B (1.85) BS01 SAH ? GO:0008168 ... Q7MY07 36963398
    778427 8bid:A (1.75) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    778428 8bid:A (1.75) BS02 QPF ? GO:0008168 ... Q7MY08 36963398
    778429 8bid:B (1.75) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    778430 8bid:B (1.75) BS02 QPF ? GO:0008168 ... Q7MY08 36963398
    778431 8bid:C (1.75) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    778432 8bid:C (1.75) BS02 QPF ? GO:0008168 ... Q7MY08 36963398
    778433 8bid:D (1.75) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    778434 8bid:D (1.75) BS02 QPF ? GO:0008168 ... Q7MY08 36963398
    778435 8bie:A (2.25) BS01 SAH ? GO:0008168 ... Q7MY05 36963398
    778436 8bie:B (2.25) BS01 SAH ? GO:0008168 ... Q7MY05 36963398
    778437 8bif:A (2.0) BS01 SAH ? GO:0008168 ... Q7MY06 36963398
    778438 8bif:B (2.0) BS01 SAH ? GO:0008168 ... Q7MY06 36963398
    778439 8bif:C (2.0) BS01 SAH ? GO:0008168 ... Q7MY06 36963398
    778440 8bif:D (2.0) BS01 SAH ? GO:0008168 ... Q7MY06 36963398
    778441 8big:A (2.8) BS01 SAH ? GO:0008168 ... Q7MY04 36963398
    778442 8big:B (2.8) BS01 SAH ? GO:0008168 ... Q7MY04 36963398
    778443 8big:C (2.8) BS01 SAH ? GO:0008168 ... Q7MY04 36963398
    778444 8big:D (2.8) BS01 SAH ? GO:0008168 ... Q7MY04 36963398
    778445 8big:E (2.8) BS01 SAH ? GO:0008168 ... Q7MY04 36963398
    778446 8big:F (2.8) BS01 SAH ? GO:0008168 ... Q7MY04 36963398
    778447 8big:G (2.8) BS01 SAH ? GO:0008168 ... Q7MY04 36963398
    778448 8big:G (2.8) BS02 MG ? GO:0008168 ... Q7MY04 36963398
    778449 8big:H (2.8) BS01 SAH ? GO:0008168 ... Q7MY04 36963398
    778450 8bih:A (2.4) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    778451 8bih:A (2.4) BS02 QOT ? GO:0008168 ... Q7MY08 36963398
    778452 8bih:B (2.4) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    778453 8bih:B (2.4) BS02 QOT ? GO:0008168 ... Q7MY08 36963398
    778454 8bih:C (2.4) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    778455 8bih:C (2.4) BS02 QOT ? GO:0008168 ... Q7MY08 36963398
    778456 8bih:D (2.4) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    778457 8bih:D (2.4) BS02 QOT ? GO:0008168 ... Q7MY08 36963398
    778458 8bih:E (2.4) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    778459 8bih:E (2.4) BS02 QOT ? GO:0008168 ... Q7MY08 36963398
    778460 8bih:F (2.4) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    778461 8bih:F (2.4) BS02 QOT ? GO:0008168 ... Q7MY08 36963398
    778462 8bih:G (2.4) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    778463 8bih:G (2.4) BS02 QOT ? GO:0008168 ... Q7MY08 36963398
    778464 8bih:H (2.4) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    778465 8bih:H (2.4) BS02 QOT ? GO:0008168 ... Q7MY08 36963398
    778466 8bih:I (2.4) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    778467 8bih:I (2.4) BS02 QOT ? GO:0008168 ... Q7MY08 36963398
    778468 8bih:J (2.4) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    778469 8bih:K (2.4) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    778470 8bih:L (2.4) BS01 SAH ? GO:0008168 ... Q7MY08 36963398
    778471 8bii:A (2.8) BS01 SAH ? GO:0008168 ... Q7MY04 36963398
    778472 8bii:B (2.8) BS01 SAH ? GO:0008168 ... Q7MY04 36963398
    778473 8bii:C (2.8) BS01 SAH ? GO:0008168 ... Q7MY04 36963398
    778474 8bii:D (2.8) BS01 SAH ? GO:0008168 ... Q7MY04 36963398
    778475 8bii:E (2.8) BS01 SAH ? GO:0008168 ... Q7MY04 36963398
    778476 8bii:F (2.8) BS01 SAH ? GO:0008168 ... Q7MY04 36963398
    778477 8bii:G (2.8) BS01 SAH ? GO:0008168 ... Q7MY04 36963398
    778478 8bii:H (2.8) BS01 SAH ? GO:0008168 ... Q7MY04 36963398
    778479 8bij:A (1.55) BS01 SAH ? GO:0008168 ... Q7MY05 36963398
    778480 8bij:B (1.55) BS01 SAH ? GO:0008168 ... Q7MY05 36963398
    778481 8bik:A (2.5) BS01 STU 2.7.11.1
    2.7.11.31
    GO:0003682 ... P54646 N/A
    778482 8bik:A (2.5) BS02 QTN 2.7.11.1
    2.7.11.31
    GO:0003682 ... P54646 N/A
    778483 8bik:B (2.5) BS01 QTN ? GO:0005515 ... Q9Y478 N/A
    778484 8bik:C (2.5) BS01 AMP ? GO:0004679 ... P54619 N/A
    778485 8bik:C (2.5) BS02 AMP ? GO:0004679 ... P54619 N/A
    778486 8bik:D (2.5) BS01 STU 2.7.11.1
    2.7.11.31
    GO:0003682 ... P54646 N/A
    778487 8bik:D (2.5) BS02 QTN 2.7.11.1
    2.7.11.31
    GO:0003682 ... P54646 N/A
    778488 8bik:E (2.5) BS01 QTN ? GO:0005515 ... Q9Y478 N/A
    778489 8bik:F (2.5) BS01 AMP ? GO:0004679 ... P54619 N/A
    778490 8bik:F (2.5) BS02 AMP ? GO:0004679 ... P54619 N/A
    778491 8bik:F (2.5) BS03 AMP ? GO:0004679 ... P54619 N/A
    778492 8bil:A (2.04) BS01 rna ? GO:0000027 ... P60422 37553384
    778493 8bil:B (2.04) BS01 rna ? GO:0000027 ... P60438 37553384
    778494 8bil:C (2.04) BS01 rna ? GO:0001070 ... P60723 37553384
    778495 8bil:D (2.04) BS01 rna ? GO:0000027 ... P62399 37553384
    778496 8bil:D (2.04) BS02 rna ? GO:0000027 ... P62399 37553384
    778497 8bil:D (2.04) BS03 rna ? GO:0000027 ... P62399 37553384
    778498 8bil:E (2.04) BS01 rna ? GO:0000027 ... P0AG55 37553384
    778499 8bil:F (2.04) BS01 rna ? GO:0002181 ... P0A7R1 37553384
    778500 8bil:G (2.04) BS01 rna ? GO:0002181 ... P0AA10 37553384
    778501 8bil:H (2.04) BS01 rna ? GO:0002181 ... P0ADY3 37553384
    778502 8bil:I (2.04) BS01 rna ? GO:0002181 ... P02413 37553384
    778503 8bil:J (2.04) BS01 rna ? GO:0000027 ... P0ADY7 37553384
    778504 8bil:K (2.04) BS01 rna ? GO:0000027 ... P0AG44 37553384
    778505 8bil:L (2.04) BS01 rna ? GO:0002181 ... P0C018 37553384
    778506 8bil:L (2.04) BS02 rna ? GO:0002181 ... P0C018 37553384
    778507 8bil:M (2.04) BS01 rna ? GO:0000027 ... P0A7K6 37553384
    778508 8bil:M (2.04) BS02 rna ? GO:0000027 ... P0A7K6 37553384
    778509 8bil:N (2.04) BS01 rna ? GO:0000027 ... P0A7L3 37553384
    778510 8bil:O (2.04) BS01 rna ? GO:0002181 ... P0AG48 37553384
    778511 8bil:P (2.04) BS01 rna ? GO:0002181 ... P61175 37553384
    778512 8bil:Q (2.04) BS01 rna ? GO:0000027 ... P0ADZ0 37553384
    778513 8bil:R (2.04) BS01 rna ? GO:0000027 ... P60624 37553384
    778514 8bil:S (2.04) BS01 rna ? GO:0000027 ... P68919 37553384
    778515 8bil:T (2.04) BS01 rna ? GO:0000027 ... P0A7L8 37553384
    778516 8bil:T (2.04) BS02 rna ? GO:0000027 ... P0A7L8 37553384
    778517 8bil:U (2.04) BS01 rna ? GO:0000027 ... P0A7M2 37553384
    778518 8bil:V (2.04) BS01 rna ? GO:0000027 ... P0A7M6 37553384
    778519 8bil:W (2.04) BS01 rna ? GO:0000027 ... P0AG51 37553384
    778520 8bil:X (2.04) BS01 rna ? GO:0002181 ... P0A7M9 37553384
    778521 8bil:a (2.04) BS01 rna ? GO:0000027 ... P0A7N4 37553384
    778522 8bil:b (2.04) BS01 rna ? GO:0000027 ... P0A7N9 37553384
    778523 8bil:c (2.04) BS01 rna ? GO:0002181 ... P0A7P5 37553384
    778524 8bil:d (2.04) BS01 rna ? GO:0002181 ... P0A7Q1 37553384
    778525 8bil:e (2.04) BS01 rna ? GO:0002181 ... P0A7Q6 37553384
    778526 8bil:f (2.04) BS01 rna ? GO:0000028 ... P0A7V0 37553384
    778527 8bil:g (2.04) BS01 rna ? GO:0000028 ... P0A7V3 37553384
    778528 8bil:h (2.04) BS01 rna ? GO:0000028 ... P0A7V8 37553384
    778529 8bil:i (2.04) BS01 rna ? GO:0000028 ... P0A7W1 37553384
    778530 8bil:j (2.04) BS01 rna ? GO:0002181 ... P02358 37553384
    778531 8bil:k (2.04) BS01 rna ? GO:0000028 ... P02359 37553384
    778532 8bil:l (2.04) BS01 rna ? GO:0000028 ... P0A7W7 37553384
    778533 8bil:m (2.04) BS01 rna ? GO:0002181 ... P0A7X3 37553384
    778534 8bil:m (2.04) BS02 rna ? GO:0002181 ... P0A7X3 37553384
    778535 8bil:n (2.04) BS01 rna ? GO:0000049 ... P0A7R5 37553384
    778536 8bil:o (2.04) BS01 rna ? GO:0002181 ... P0A7R9 37553384
    778537 8bil:p (2.04) BS01 rna ? GO:0000049 ... P0A7S3 37553384
    778538 8bil:q (2.04) BS01 rna ? GO:0000049 ... P0A7S9 37553384
    778539 8bil:r (2.04) BS01 rna ? GO:0000028 ... P0AG59 37553384
    778540 8bil:s (2.04) BS01 rna ? GO:0000028 ... P0ADZ4 37553384
    778541 8bil:s (2.04) BS02 rna ? GO:0000028 ... P0ADZ4 37553384
    778542 8bil:t (2.04) BS01 rna ? GO:0000028 ... P0A7T3 37553384
    778543 8bil:u (2.04) BS01 rna ? GO:0000028 ... P0AG63 37553384
    778544 8bil:v (2.04) BS01 rna ? GO:0002181 ... P0A7T7 37553384
    778545 8bil:w (2.04) BS01 rna ? GO:0002181 ... P0A7U3 37553384
    778546 8bil:x (2.04) BS01 rna ? GO:0000028 ... P0A7U7 37553384
    778547 8bil:y (2.04) BS01 rna ? GO:0000028 ... P68679 37553384
    778548 8bim:A (2.04) BS01 rna ? GO:0000027 ... P60422 37553384
    778549 8bim:B (2.04) BS01 rna ? GO:0000027 ... P60438 37553384
    778550 8bim:C (2.04) BS01 rna ? GO:0001070 ... P60723 37553384
    778551 8bim:D (2.04) BS01 rna ? GO:0000027 ... P62399 37553384
    778552 8bim:D (2.04) BS02 rna ? GO:0000027 ... P62399 37553384
    778553 8bim:D (2.04) BS03 rna ? GO:0000027 ... P62399 37553384
    778554 8bim:E (2.04) BS01 rna ? GO:0000027 ... P0AG55 37553384
    778555 8bim:F (2.04) BS01 rna ? GO:0002181 ... P0A7R1 37553384
    778556 8bim:G (2.04) BS01 rna ? GO:0002181 ... P0AA10 37553384
    778557 8bim:H (2.04) BS01 rna ? GO:0002181 ... P0ADY3 37553384
    778558 8bim:I (2.04) BS01 rna ? GO:0002181 ... P02413 37553384
    778559 8bim:J (2.04) BS01 rna ? GO:0000027 ... P0ADY7 37553384
    778560 8bim:K (2.04) BS01 rna ? GO:0000027 ... P0AG44 37553384
    778561 8bim:L (2.04) BS01 rna ? GO:0002181 ... P0C018 37553384
    778562 8bim:L (2.04) BS02 rna ? GO:0002181 ... P0C018 37553384
    778563 8bim:M (2.04) BS01 rna ? GO:0000027 ... P0A7K6 37553384
    778564 8bim:M (2.04) BS02 rna ? GO:0000027 ... P0A7K6 37553384
    778565 8bim:N (2.04) BS01 rna ? GO:0000027 ... P0A7L3 37553384
    778566 8bim:O (2.04) BS01 rna ? GO:0002181 ... P0AG48 37553384
    778567 8bim:P (2.04) BS01 rna ? GO:0002181 ... P61175 37553384
    778568 8bim:Q (2.04) BS01 rna ? GO:0000027 ... P0ADZ0 37553384
    778569 8bim:R (2.04) BS01 rna ? GO:0000027 ... P60624 37553384
    778570 8bim:S (2.04) BS01 rna ? GO:0000027 ... P68919 37553384
    778571 8bim:T (2.04) BS01 rna ? GO:0000027 ... P0A7L8 37553384
    778572 8bim:T (2.04) BS02 rna ? GO:0000027 ... P0A7L8 37553384
    778573 8bim:U (2.04) BS01 rna ? GO:0000027 ... P0A7M2 37553384
    778574 8bim:V (2.04) BS01 rna ? GO:0000027 ... P0A7M6 37553384
    778575 8bim:W (2.04) BS01 rna ? GO:0000027 ... P0AG51 37553384
    778576 8bim:X (2.04) BS01 rna ? GO:0002181 ... P0A7M9 37553384
    778577 8bim:a (2.04) BS01 rna ? GO:0000027 ... P0A7N4 37553384
    778578 8bim:b (2.04) BS01 rna ? GO:0000027 ... P0A7N9 37553384
    778579 8bim:c (2.04) BS01 rna ? GO:0002181 ... P0A7P5 37553384
    778580 8bim:d (2.04) BS01 rna ? GO:0002181 ... P0A7Q1 37553384
    778581 8bim:e (2.04) BS01 rna ? GO:0002181 ... P0A7Q6 37553384
    778582 8bim:f (2.04) BS01 rna ? GO:0000028 ... P0A7V0 37553384
    778583 8bim:g (2.04) BS01 rna ? GO:0000028 ... P0A7V3 37553384
    778584 8bim:h (2.04) BS01 rna ? GO:0000028 ... P0A7V8 37553384
    778585 8bim:i (2.04) BS01 rna ? GO:0000028 ... P0A7W1 37553384
    778586 8bim:j (2.04) BS01 rna ? GO:0002181 ... P02358 37553384
    778587 8bim:k (2.04) BS01 rna ? GO:0000028 ... P02359 37553384
    778588 8bim:l (2.04) BS01 rna ? GO:0000028 ... P0A7W7 37553384
    778589 8bim:m (2.04) BS01 rna ? GO:0002181 ... P0A7X3 37553384
    778590 8bim:m (2.04) BS02 rna ? GO:0002181 ... P0A7X3 37553384
    778591 8bim:n (2.04) BS01 rna ? GO:0000049 ... P0A7R5 37553384
    778592 8bim:o (2.04) BS01 rna ? GO:0002181 ... P0A7R9 37553384
    778593 8bim:p (2.04) BS01 rna ? GO:0000049 ... P0A7S3 37553384
    778594 8bim:q (2.04) BS01 rna ? GO:0000049 ... P0A7S9 37553384
    778595 8bim:r (2.04) BS01 rna ? GO:0000028 ... P0AG59 37553384
    778596 8bim:s (2.04) BS01 rna ? GO:0000028 ... P0ADZ4 37553384
    778597 8bim:s (2.04) BS02 rna ? GO:0000028 ... P0ADZ4 37553384
    778598 8bim:t (2.04) BS01 rna ? GO:0000028 ... P0A7T3 37553384
    778599 8bim:u (2.04) BS01 rna ? GO:0000028 ... P0AG63 37553384
    778600 8bim:v (2.04) BS01 rna ? GO:0002181 ... P0A7T7 37553384

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).