SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    778601 8c3a:AP (3.0) BS02 3K5 ? GO:0003735 ... A0A1D8PEV4 N/A
    778602 8c3a:AP (3.0) BS03 ZN ? GO:0003735 ... A0A1D8PEV4 N/A
    778603 8c3a:AQ (3.0) BS01 rna ? GO:0003735 ... A0A1D8PP14 N/A
    778604 8c3a:AQ (3.0) BS02 ZN ? GO:0003735 ... A0A1D8PP14 N/A
    778605 8c3a:AR (3.0) BS01 rna ? GO:0001403 ... P83774 N/A
    778606 8c3a:AW (3.0) BS01 rna ? GO:0002181 ... A0A1D8PF08 N/A
    778607 8c3a:AW (3.0) BS02 MG ? GO:0002181 ... A0A1D8PF08 N/A
    778608 8c3a:AW (3.0) BS03 MG ? GO:0002181 ... A0A1D8PF08 N/A
    778609 8c3a:AX (3.0) BS01 rna ? GO:0000027 ... Q59LS1 N/A
    778610 8c3a:AY (3.0) BS01 rna ? GO:0003723 ... A0A1D8PFV1 N/A
    778611 8c3a:AY (3.0) BS02 rna ? GO:0003723 ... A0A1D8PFV1 N/A
    778612 8c3a:AZ (3.0) BS01 rna ? GO:0000027 ... Q5AGZ7 N/A
    778613 8c3a:AZ (3.0) BS02 rna ? GO:0000027 ... Q5AGZ7 N/A
    778614 8c3a:BA (3.0) BS01 rna ? GO:0002181 ... A0A1D8PCX8 N/A
    778615 8c3a:BB (3.0) BS01 rna ? GO:0000463 ... A0A1D8PDL6 N/A
    778616 8c3a:BB (3.0) BS02 rna ? GO:0000463 ... A0A1D8PDL6 N/A
    778617 8c3a:BC (3.0) BS01 rna ? GO:0000470 ... Q5ANA1 N/A
    778618 8c3a:BC (3.0) BS02 rna ? GO:0000470 ... Q5ANA1 N/A
    778619 8c3a:BD (3.0) BS01 rna ? GO:0002181 ... Q5AEN2 N/A
    778620 8c3a:BE (3.0) BS01 rna ? GO:0003735 ... Q5AIB8 N/A
    778621 8c3a:BE (3.0) BS02 rna ? GO:0003735 ... Q5AIB8 N/A
    778622 8c3a:BE (3.0) BS03 MG ? GO:0003735 ... Q5AIB8 N/A
    778623 8c3a:BF (3.0) BS01 rna ? GO:0003723 ... A0A1D8PHW1 N/A
    778624 8c3a:BF (3.0) BS02 rna ? GO:0003723 ... A0A1D8PHW1 N/A
    778625 8c3a:BG (3.0) BS01 rna ? GO:0003723 ... O59931 N/A
    778626 8c3a:BG (3.0) BS02 rna ? GO:0003723 ... O59931 N/A
    778627 8c3a:BH (3.0) BS01 rna ? GO:0003723 ... A0A1D8PFL9 N/A
    778628 8c3a:BI (3.0) BS01 rna ? GO:0002181 ... Q5A6R1 N/A
    778629 8c3a:BI (3.0) BS02 rna ? GO:0002181 ... Q5A6R1 N/A
    778630 8c3a:BJ (3.0) BS01 rna ? GO:0003729 ... Q5AB87 N/A
    778631 8c3a:BJ (3.0) BS02 MG ? GO:0003729 ... Q5AB87 N/A
    778632 8c3a:BK (3.0) BS01 rna ? GO:0002181 ... Q59TE0 N/A
    778633 8c3a:BK (3.0) BS02 rna ? GO:0002181 ... Q59TE0 N/A
    778634 8c3a:BK (3.0) BS03 MG ? GO:0002181 ... Q59TE0 N/A
    778635 8c3a:BL (3.0) BS01 rna ? GO:0003723 ... A0A1D8PK43 N/A
    778636 8c3a:BM (3.0) BS01 rna ? GO:0003723 ... A0A1D8PK40 N/A
    778637 8c3a:BM (3.0) BS02 rna ? GO:0003723 ... A0A1D8PK40 N/A
    778638 8c3a:BN (3.0) BS01 rna ? GO:0002181 ... A0A1D8PLC9 N/A
    778639 8c3a:BN (3.0) BS02 rna ? GO:0002181 ... A0A1D8PLC9 N/A
    778640 8c3a:BO (3.0) BS01 rna ? GO:0003735 ... A0A1D8PGY0 N/A
    778641 8c3a:BO (3.0) BS02 rna ? GO:0003735 ... A0A1D8PGY0 N/A
    778642 8c3a:BP (3.0) BS01 rna ? GO:0002181 ... A0A1D8PM41 N/A
    778643 8c3a:BQ (3.0) BS01 rna ? GO:0003735 ... A0A1D8PPT5 N/A
    778644 8c3a:BQ (3.0) BS02 MG ? GO:0003735 ... A0A1D8PPT5 N/A
    778645 8c3a:BR (3.0) BS01 rna ? GO:0002181 ... Q5A6A1 N/A
    778646 8c3a:BR (3.0) BS02 rna ? GO:0002181 ... Q5A6A1 N/A
    778647 8c3a:BS (3.0) BS01 rna ? GO:0003735 ... A0A1D8PPS1 N/A
    778648 8c3a:BS (3.0) BS02 rna ? GO:0003735 ... A0A1D8PPS1 N/A
    778649 8c3a:BS (3.0) BS03 MG ? GO:0003735 ... A0A1D8PPS1 N/A
    778650 8c3a:BT (3.0) BS01 rna ? GO:0002181 ... A0A1D8PCQ5 N/A
    778651 8c3a:BT (3.0) BS02 rna ? GO:0002181 ... A0A1D8PCQ5 N/A
    778652 8c3a:BU (3.0) BS01 rna ? GO:0003735 ... Q9P843 N/A
    778653 8c3a:BV (3.0) BS01 rna ? GO:0003723 ... A0A1D8PSC5 N/A
    778654 8c3a:BW (3.0) BS01 rna ? GO:0002181 ... A0A1D8PF57 N/A
    778655 8c3a:BX (3.0) BS01 rna ? GO:0003723 ... A0A1D8PM75 N/A
    778656 8c3a:BY (3.0) BS01 rna ? GO:0002181 ... A0A8H6F1M1 N/A
    778657 8c3a:BZ (3.0) BS01 rna ? GO:0003735 ... A0A1D8PPN6 N/A
    778658 8c3a:BZ (3.0) BS02 MG ? GO:0003735 ... A0A1D8PPN6 N/A
    778659 8c3a:BZ (3.0) BS03 MG ? GO:0003735 ... A0A1D8PPN6 N/A
    778660 8c3a:BZ (3.0) BS04 MG ? GO:0003735 ... A0A1D8PPN6 N/A
    778661 8c3a:C (3.0) BS01 rna ? GO:0000028 ... O42817 N/A
    778662 8c3a:CA (3.0) BS01 rna ? GO:0002181 ... A0A1D8PHH4 N/A
    778663 8c3a:CA (3.0) BS02 MG ? GO:0002181 ... A0A1D8PHH4 N/A
    778664 8c3a:CB (3.0) BS01 rna ? GO:0003735 ... A0A1D8PDZ1 N/A
    778665 8c3a:CC (3.0) BS01 rna ? GO:0000463 ... A0A1D8PK30 N/A
    778666 8c3a:CC (3.0) BS02 rna ? GO:0000463 ... A0A1D8PK30 N/A
    778667 8c3a:CD (3.0) BS01 rna ? GO:0002181 ... A0A1D8PH21 N/A
    778668 8c3a:CE (3.0) BS01 rna ? GO:0003723 ... A0A1D8PF45 N/A
    778669 8c3a:CE (3.0) BS02 rna ? GO:0003723 ... A0A1D8PF45 N/A
    778670 8c3a:CE (3.0) BS03 ZN ? GO:0003723 ... A0A1D8PF45 N/A
    778671 8c3a:CF (3.0) BS01 rna ? GO:0003735 ... A0A1D8PG16 N/A
    778672 8c3a:CG (3.0) BS01 rna ? GO:0003735 ... A0A1D8PDT4 N/A
    778673 8c3a:CG (3.0) BS02 rna ? GO:0003735 ... A0A1D8PDT4 N/A
    778674 8c3a:CH (3.0) BS01 rna ? GO:0003735 ... A0A1D8PL68 N/A
    778675 8c3a:CH (3.0) BS02 ZN ? GO:0003735 ... A0A1D8PL68 N/A
    778676 8c3a:CJ (3.0) BS01 rna ? GO:0003735 ... A0A1D8PEV4 N/A
    778677 8c3a:CJ (3.0) BS02 3K5 ? GO:0003735 ... A0A1D8PEV4 N/A
    778678 8c3a:CJ (3.0) BS03 ZN ? GO:0003735 ... A0A1D8PEV4 N/A
    778679 8c3a:CK (3.0) BS01 rna ? GO:0003735 ... A0A1D8PP14 N/A
    778680 8c3a:CK (3.0) BS02 ZN ? GO:0003735 ... A0A1D8PP14 N/A
    778681 8c3a:CL (3.0) BS01 rna ? GO:0000723 ... A0A1D8PK71 N/A
    778682 8c3a:CL (3.0) BS02 rna ? GO:0000723 ... A0A1D8PK71 N/A
    778683 8c3a:CN (3.0) BS01 rna ? GO:0000028 ... O42817 N/A
    778684 8c3a:CO (3.0) BS01 rna ? GO:0003735 ... P40910 N/A
    778685 8c3a:CP (3.0) BS01 rna ? GO:0000054 ... Q5A900 N/A
    778686 8c3a:CQ (3.0) BS01 rna ? GO:0000054 ... A0A1D8PSV5 N/A
    778687 8c3a:CR (3.0) BS01 rna ? GO:0003723 ... A0A1D8PCI6 N/A
    778688 8c3a:CS (3.0) BS01 rna ? GO:0000028 ... Q5AG43 N/A
    778689 8c3a:CT (3.0) BS01 rna ? GO:0003735 ... A0A1D8PL99 N/A
    778690 8c3a:CU (3.0) BS01 rna ? GO:0003735 ... Q5AJ93 N/A
    778691 8c3a:CV (3.0) BS01 rna ? GO:0000462 ... Q59T44 N/A
    778692 8c3a:CV (3.0) BS02 rna ? GO:0000462 ... Q59T44 N/A
    778693 8c3a:CW (3.0) BS01 rna ? GO:0003723 ... A0A1D8PGY8 N/A
    778694 8c3a:CX (3.0) BS01 rna ? GO:0003674 ... A0A1D8PI15 N/A
    778695 8c3a:CY (3.0) BS01 rna ? GO:0003735 ... A0A1D8PN83 N/A
    778696 8c3a:CY (3.0) BS02 MG ? GO:0003735 ... A0A1D8PN83 N/A
    778697 8c3a:CZ (3.0) BS01 rna ? GO:0000028 ... Q5ADQ6 N/A
    778698 8c3a:D (3.0) BS01 rna ? GO:0003735 ... P40910 N/A
    778699 8c3a:DA (3.0) BS01 rna ? GO:0003735 ... A0A1D8PPE0 N/A
    778700 8c3a:DB (3.0) BS01 rna ? GO:0000028 ... A0A1D8PDT3 N/A
    778701 8c3a:DB (3.0) BS02 MG ? GO:0000028 ... A0A1D8PDT3 N/A
    778702 8c3a:DC (3.0) BS01 rna ? GO:0000028 ... A0A1D8PK22 N/A
    778703 8c3a:DD (3.0) BS01 rna ? GO:0000462 ... A0A1D8PCW6 N/A
    778704 8c3a:DE (3.0) BS01 rna ? GO:0003735 ... A0A1D8PEY9 N/A
    778705 8c3a:DF (3.0) BS01 rna ? GO:0003676 ... A0A1D8PQQ5 N/A
    778706 8c3a:DG (3.0) BS01 rna ? GO:0000028 ... A0A1D8PK61 N/A
    778707 8c3a:DG (3.0) BS02 MG ? GO:0000028 ... A0A1D8PK61 N/A
    778708 8c3a:DG (3.0) BS03 MG ? GO:0000028 ... A0A1D8PK61 N/A
    778709 8c3a:DH (3.0) BS01 rna ? GO:0003723 ... Q5A389 N/A
    778710 8c3a:DI (3.0) BS01 rna ? GO:0000447 ... A0A1D8PCG7 N/A
    778711 8c3a:DJ (3.0) BS01 rna ? GO:0003735 ... Q96W54 N/A
    778712 8c3a:DJ (3.0) BS02 MG ? GO:0003735 ... Q96W54 N/A
    778713 8c3a:DK (3.0) BS01 rna ? GO:0003735 ... A0A1D8PDU3 N/A
    778714 8c3a:DL (3.0) BS01 rna ? GO:0003735 ... Q5A7K0 N/A
    778715 8c3a:DM (3.0) BS01 rna ? GO:0003735 ... A0A1D8PNQ6 N/A
    778716 8c3a:DN (3.0) BS01 rna ? GO:0003729 ... Q5ALV6 N/A
    778717 8c3a:DN (3.0) BS02 ZN ? GO:0003729 ... Q5ALV6 N/A
    778718 8c3a:DO (3.0) BS01 rna ? GO:0000028 ... A0A1D8PTI7 N/A
    778719 8c3a:DP (3.0) BS01 rna ? GO:0000028 ... A0A1D8PQN0 N/A
    778720 8c3a:DQ (3.0) BS01 rna ? GO:0002181 ... A0A1D8PTR4 N/A
    778721 8c3a:DQ (3.0) BS02 MG ? GO:0002181 ... A0A1D8PTR4 N/A
    778722 8c3a:DQ (3.0) BS03 ZN ? GO:0002181 ... A0A1D8PTR4 N/A
    778723 8c3a:DR (3.0) BS01 rna ? GO:0003735 ... A0A1D8PSK2 N/A
    778724 8c3a:DS (3.0) BS01 rna ? GO:0003735 ... Q5A109 N/A
    778725 8c3a:DS (3.0) BS02 ZN ? GO:0003735 ... Q5A109 N/A
    778726 8c3a:DT (3.0) BS01 rna ? GO:0001403 ... P83774 N/A
    778727 8c3a:E (3.0) BS01 rna ? GO:0000054 ... Q5A900 N/A
    778728 8c3a:F (3.0) BS01 rna ? GO:0000054 ... A0A1D8PSV5 N/A
    778729 8c3a:G (3.0) BS01 rna ? GO:0003723 ... A0A1D8PCI6 N/A
    778730 8c3a:G (3.0) BS02 MG ? GO:0003723 ... A0A1D8PCI6 N/A
    778731 8c3a:H (3.0) BS01 rna ? GO:0000028 ... Q5AG43 N/A
    778732 8c3a:H (3.0) BS02 MG ? GO:0000028 ... Q5AG43 N/A
    778733 8c3a:I (3.0) BS01 rna ? GO:0003735 ... A0A1D8PL99 N/A
    778734 8c3a:J (3.0) BS01 rna ? GO:0003735 ... Q5AJ93 N/A
    778735 8c3a:J (3.0) BS02 MG ? GO:0003735 ... Q5AJ93 N/A
    778736 8c3a:K (3.0) BS01 rna ? GO:0000462 ... Q59T44 N/A
    778737 8c3a:K (3.0) BS02 rna ? GO:0000462 ... Q59T44 N/A
    778738 8c3a:L (3.0) BS01 rna ? GO:0003723 ... A0A1D8PGY8 N/A
    778739 8c3a:L1 (3.0) BS01 rna ? GO:0003723 ... Q9UVJ4 N/A
    778740 8c3a:M (3.0) BS01 rna ? GO:0003674 ... A0A1D8PI15 N/A
    778741 8c3a:N (3.0) BS01 rna ? GO:0003735 ... A0A1D8PN83 N/A
    778742 8c3a:O (3.0) BS01 rna ? GO:0000028 ... Q5ADQ6 N/A
    778743 8c3a:P (3.0) BS01 rna ? GO:0003735 ... A0A1D8PPE0 N/A
    778744 8c3a:P0 (3.0) BS01 rna ? GO:0000027 ... G1UA71 N/A
    778745 8c3a:Q (3.0) BS01 rna ? GO:0000028 ... A0A1D8PDT3 N/A
    778746 8c3a:Q (3.0) BS02 MG ? GO:0000028 ... A0A1D8PDT3 N/A
    778747 8c3a:R (3.0) BS01 rna ? GO:0000028 ... A0A1D8PK22 N/A
    778748 8c3a:R (3.0) BS02 rna ? GO:0000028 ... A0A1D8PK22 N/A
    778749 8c3a:R (3.0) BS03 MG ? GO:0000028 ... A0A1D8PK22 N/A
    778750 8c3a:S (3.0) BS01 rna ? GO:0000462 ... A0A1D8PCW6 N/A
    778751 8c3a:T (3.0) BS01 rna ? GO:0003735 ... A0A1D8PEY9 N/A
    778752 8c3a:U (3.0) BS01 rna ? GO:0003676 ... A0A1D8PQQ5 N/A
    778753 8c3a:V (3.0) BS01 rna ? GO:0000028 ... A0A1D8PK61 N/A
    778754 8c3a:W (3.0) BS01 rna ? GO:0003723 ... Q5A389 N/A
    778755 8c3a:X (3.0) BS01 rna ? GO:0000447 ... A0A1D8PCG7 N/A
    778756 8c3a:Y (3.0) BS01 rna ? GO:0003735 ... Q96W54 N/A
    778757 8c3a:Y (3.0) BS02 MG ? GO:0003735 ... Q96W54 N/A
    778758 8c3a:Z (3.0) BS01 rna ? GO:0003735 ... A0A1D8PDU3 N/A
    778759 8c3a:a (3.0) BS01 rna ? GO:0003735 ... Q5A7K0 N/A
    778760 8c3a:b (3.0) BS01 rna ? GO:0003735 ... A0A1D8PNQ6 N/A
    778761 8c3a:c (3.0) BS01 rna ? GO:0003729 ... Q5ALV6 N/A
    778762 8c3a:c (3.0) BS02 ZN ? GO:0003729 ... Q5ALV6 N/A
    778763 8c3a:d (3.0) BS01 rna ? GO:0000028 ... A0A1D8PTI7 N/A
    778764 8c3a:e (3.0) BS01 rna ? GO:0000028 ... A0A1D8PQN0 N/A
    778765 8c3a:f (3.0) BS01 rna ? GO:0002181 ... A0A1D8PTR4 N/A
    778766 8c3a:f (3.0) BS02 ZN ? GO:0002181 ... A0A1D8PTR4 N/A
    778767 8c3a:g (3.0) BS01 rna ? GO:0003735 ... A0A1D8PSK2 N/A
    778768 8c3a:h (3.0) BS01 rna ? GO:0003735 ... Q5A109 N/A
    778769 8c3a:i (3.0) BS01 rna ? GO:0000723 ... A0A1D8PK71 N/A
    778770 8c3a:i (3.0) BS02 rna ? GO:0000723 ... A0A1D8PK71 N/A
    778771 8c3a:i (3.0) BS03 MG ? GO:0000723 ... A0A1D8PK71 N/A
    778772 8c3a:i (3.0) BS04 MG ? GO:0000723 ... A0A1D8PK71 N/A
    778773 8c3a:j (3.0) BS01 rna ? GO:0002181 ... A0A1D8PF08 N/A
    778774 8c3a:j (3.0) BS02 rna ? GO:0002181 ... A0A1D8PF08 N/A
    778775 8c3a:j (3.0) BS03 MG ? GO:0002181 ... A0A1D8PF08 N/A
    778776 8c3a:j (3.0) BS04 MG ? GO:0002181 ... A0A1D8PF08 N/A
    778777 8c3a:k (3.0) BS01 rna ? GO:0000027 ... Q59LS1 N/A
    778778 8c3a:k (3.0) BS02 MG ? GO:0000027 ... Q59LS1 N/A
    778779 8c3a:k (3.0) BS03 MG ? GO:0000027 ... Q59LS1 N/A
    778780 8c3a:k (3.0) BS04 MG ? GO:0000027 ... Q59LS1 N/A
    778781 8c3a:k (3.0) BS05 MG ? GO:0000027 ... Q59LS1 N/A
    778782 8c3a:l (3.0) BS01 rna ? GO:0003723 ... A0A1D8PFV1 N/A
    778783 8c3a:l (3.0) BS02 rna ? GO:0003723 ... A0A1D8PFV1 N/A
    778784 8c3a:l1 (3.0) BS01 rna ? GO:0003723 ... Q9UVJ4 N/A
    778785 8c3a:m (3.0) BS01 rna ? GO:0000027 ... Q5AGZ7 N/A
    778786 8c3a:m (3.0) BS02 rna ? GO:0000027 ... Q5AGZ7 N/A
    778787 8c3a:n (3.0) BS01 rna ? GO:0002181 ... A0A1D8PCX8 N/A
    778788 8c3a:o (3.0) BS01 rna ? GO:0000463 ... A0A1D8PDL6 N/A
    778789 8c3a:o (3.0) BS02 rna ? GO:0000463 ... A0A1D8PDL6 N/A
    778790 8c3a:p (3.0) BS01 rna ? GO:0000470 ... Q5ANA1 N/A
    778791 8c3a:p (3.0) BS02 rna ? GO:0000470 ... Q5ANA1 N/A
    778792 8c3a:p0 (3.0) BS01 rna ? GO:0000027 ... G1UA71 N/A
    778793 8c3a:q (3.0) BS01 rna ? GO:0002181 ... Q5AEN2 N/A
    778794 8c3a:r (3.0) BS01 rna ? GO:0003735 ... Q5AIB8 N/A
    778795 8c3a:r (3.0) BS02 rna ? GO:0003735 ... Q5AIB8 N/A
    778796 8c3a:r (3.0) BS03 MG ? GO:0003735 ... Q5AIB8 N/A
    778797 8c3a:r (3.0) BS04 MG ? GO:0003735 ... Q5AIB8 N/A
    778798 8c3a:s (3.0) BS01 rna ? GO:0003723 ... A0A1D8PHW1 N/A
    778799 8c3a:s (3.0) BS02 rna ? GO:0003723 ... A0A1D8PHW1 N/A
    778800 8c3a:t (3.0) BS01 rna ? GO:0003723 ... O59931 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).