SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    778801 8c3a:t (3.0) BS02 rna ? GO:0003723 ... O59931 N/A
    778802 8c3a:u (3.0) BS01 rna ? GO:0003723 ... A0A1D8PFL9 N/A
    778803 8c3a:v (3.0) BS01 rna ? GO:0002181 ... Q5A6R1 N/A
    778804 8c3a:v (3.0) BS02 rna ? GO:0002181 ... Q5A6R1 N/A
    778805 8c3a:v (3.0) BS03 MG ? GO:0002181 ... Q5A6R1 N/A
    778806 8c3a:w (3.0) BS01 rna ? GO:0003729 ... Q5AB87 N/A
    778807 8c3a:w (3.0) BS02 MG ? GO:0003729 ... Q5AB87 N/A
    778808 8c3a:x (3.0) BS01 rna ? GO:0002181 ... Q59TE0 N/A
    778809 8c3a:x (3.0) BS02 rna ? GO:0002181 ... Q59TE0 N/A
    778810 8c3a:x (3.0) BS03 MG ? GO:0002181 ... Q59TE0 N/A
    778811 8c3a:x (3.0) BS04 MG ? GO:0002181 ... Q59TE0 N/A
    778812 8c3a:y (3.0) BS01 rna ? GO:0003723 ... A0A1D8PK43 N/A
    778813 8c3a:z (3.0) BS01 rna ? GO:0003723 ... A0A1D8PK40 N/A
    778814 8c3a:z (3.0) BS02 rna ? GO:0003723 ... A0A1D8PK40 N/A
    778815 8c3a:z (3.0) BS03 MG ? GO:0003723 ... A0A1D8PK40 N/A
    778816 8c3b:BBB (1.24) BS01 T9L 4.6.1.18 GO:0003676 ... P61823 N/A
    778817 8c3b:BBB (1.24) BS02 T9U 4.6.1.18 GO:0003676 ... P61823 N/A
    778818 8c3c:A (1.6) BS01 peptide ? GO:0000122 ... P31947 37350830
    778819 8c3c:A (1.6) BS02 FSC ? GO:0000122 ... P31947 37350830
    778820 8c3c:A (1.6) BS03 MG ? GO:0000122 ... P31947 37350830
    778821 8c3d:A (2.0) BS01 peptide 3.4.22.38 GO:0006508 ... P43235 37853179
    778822 8c3d:A (2.0) BS02 CA 3.4.22.38 GO:0006508 ... P43235 37853179
    778823 8c3f:L (2.6) BS01 BCL ? GO:0009772 ... Q3J1A5 36837660
    778824 8c3f:L (2.6) BS02 BPB ? GO:0009772 ... Q3J1A5 36837660
    778825 8c3f:L (2.6) BS03 U10 ? GO:0009772 ... Q3J1A5 36837660
    778826 8c3f:L (2.6) BS04 BCL ? GO:0009772 ... Q3J1A5 36837660
    778827 8c3f:L (2.6) BS05 BCL ? GO:0009772 ... Q3J1A5 36837660
    778828 8c3f:L (2.6) BS06 BPB ? GO:0009772 ... Q3J1A5 36837660
    778829 8c3f:L (2.6) BS07 FE ? GO:0009772 ... Q3J1A5 36837660
    778830 8c3f:L (2.6) BS08 U10 ? GO:0009772 ... Q3J1A5 36837660
    778831 8c3f:M (2.6) BS01 BPB ? GO:0009772 ... Q3J1A6 36837660
    778832 8c3f:M (2.6) BS02 BCL ? GO:0009772 ... Q3J1A6 36837660
    778833 8c3f:M (2.6) BS03 BCL ? GO:0009772 ... Q3J1A6 36837660
    778834 8c3f:M (2.6) BS04 BCL ? GO:0009772 ... Q3J1A6 36837660
    778835 8c3f:M (2.6) BS05 BPB ? GO:0009772 ... Q3J1A6 36837660
    778836 8c3f:M (2.6) BS06 FE ? GO:0009772 ... Q3J1A6 36837660
    778837 8c3f:M (2.6) BS07 U10 ? GO:0009772 ... Q3J1A6 36837660
    778838 8c3f:M (2.6) BS08 SPN ? GO:0009772 ... Q3J1A6 36837660
    778839 8c3g:A (2.08) BS01 QS0 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 N/A
    778840 8c3g:B (2.08) BS01 QS0 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 N/A
    778841 8c3g:C (2.08) BS01 QS0 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 N/A
    778842 8c3g:D (2.08) BS01 QS0 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 N/A
    778843 8c3h:A (1.71) BS01 peptide ? GO:0046872 ... A4TVL0 36701892
    778844 8c3h:A (1.71) BS02 ZN ? GO:0046872 ... A4TVL0 36701892
    778845 8c3h:B (1.71) BS01 peptide ? GO:0046872 ... A4TVL0 36701892
    778846 8c3h:B (1.71) BS02 ZN ? GO:0046872 ... A4TVL0 36701892
    778847 8c3h:C (1.71) BS01 ZN ? GO:0046872 ... A4TVL0 36701892
    778848 8c3i:A (2.1) BS01 LBV 2.7.13.3 GO:0006355 ... Q9RZA4 N/A
    778849 8c3i:B (2.1) BS01 LBV 2.7.13.3 GO:0006355 ... Q9RZA4 N/A
    778850 8c3j:C (3.02) BS01 TKI ? N/A P51587 38075664
    778851 8c3m:A (2.6) BS01 FAD 1.18.1.2 GO:0000166 ... Q81IK1 37371954
    778852 8c3m:A (2.6) BS02 FAD 1.18.1.2 GO:0000166 ... Q81IK1 37371954
    778853 8c3m:B (2.6) BS01 FAD 1.18.1.2 GO:0000166 ... Q81IK1 37371954
    778854 8c3m:B (2.6) BS02 FAD 1.18.1.2 GO:0000166 ... Q81IK1 37371954
    778855 8c3n:A (1.21) BS01 peptide ? GO:0003677 ... O74036 38075664
    778856 8c3n:A (1.21) BS02 ADP ? GO:0003677 ... O74036 38075664
    778857 8c3n:A (1.21) BS03 RF6 ? GO:0003677 ... O74036 38075664
    778858 8c3o:A (2.47) BS01 5JK 3.1.4.39 GO:0003676 ... Q13822 37976710
    778859 8c3o:A (2.47) BS02 T8R 3.1.4.39 GO:0003676 ... Q13822 37976710
    778860 8c3o:A (2.47) BS03 ZN 3.1.4.39 GO:0003676 ... Q13822 37976710
    778861 8c3o:A (2.47) BS04 ZN 3.1.4.39 GO:0003676 ... Q13822 37976710
    778862 8c3o:A (2.47) BS05 CA 3.1.4.39 GO:0003676 ... Q13822 37976710
    778863 8c3o:B (2.47) BS01 5JK 3.1.4.39 GO:0003676 ... Q13822 37976710
    778864 8c3o:B (2.47) BS02 T8R 3.1.4.39 GO:0003676 ... Q13822 37976710
    778865 8c3o:B (2.47) BS03 ZN 3.1.4.39 GO:0003676 ... Q13822 37976710
    778866 8c3o:B (2.47) BS04 ZN 3.1.4.39 GO:0003676 ... Q13822 37976710
    778867 8c3o:B (2.47) BS05 CA 3.1.4.39 GO:0003676 ... Q13822 37976710
    778868 8c3p:A (2.38) BS01 5JK 3.1.4.39 GO:0003676 ... Q13822 37976710
    778869 8c3p:A (2.38) BS02 NKP 3.1.4.39 GO:0003676 ... Q13822 37976710
    778870 8c3p:A (2.38) BS03 CA 3.1.4.39 GO:0003676 ... Q13822 37976710
    778871 8c3p:A (2.38) BS04 CA 3.1.4.39 GO:0003676 ... Q13822 37976710
    778872 8c3p:A (2.38) BS05 ZN 3.1.4.39 GO:0003676 ... Q13822 37976710
    778873 8c3p:A (2.38) BS06 ZN 3.1.4.39 GO:0003676 ... Q13822 37976710
    778874 8c3p:B (2.38) BS01 5JK 3.1.4.39 GO:0003676 ... Q13822 37976710
    778875 8c3p:B (2.38) BS02 NKP 3.1.4.39 GO:0003676 ... Q13822 37976710
    778876 8c3p:B (2.38) BS03 CA 3.1.4.39 GO:0003676 ... Q13822 37976710
    778877 8c3p:B (2.38) BS04 CA 3.1.4.39 GO:0003676 ... Q13822 37976710
    778878 8c3p:B (2.38) BS05 ZN 3.1.4.39 GO:0003676 ... Q13822 37976710
    778879 8c3p:B (2.38) BS06 ZN 3.1.4.39 GO:0003676 ... Q13822 37976710
    778880 8c3q:A (2.32) BS01 RUT 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 N/A
    778881 8c3q:B (2.32) BS01 RUT 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 N/A
    778882 8c3r:A (2.06) BS01 R7O 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 N/A
    778883 8c3r:B (2.06) BS01 R7O 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 N/A
    778884 8c3u:A (1.945) BS01 T9C ? GO:0005125 ... P01584 37679328
    778885 8c3u:B (1.945) BS01 T9C ? GO:0005125 ... P01584 37679328
    778886 8c3u:B (1.945) BS02 T9C ? GO:0005125 ... P01584 37679328
    778887 8c3w:A (1.6) BS01 HEM N/A N/A N/A 37341421
    778888 8c3z:A (1.4) BS01 peptide ? GO:0000122 ... P31947 37224961
    778889 8c3z:A (1.4) BS02 MG ? GO:0000122 ... P31947 37224961
    778890 8c40:A (1.4) BS01 peptide ? GO:0000122 ... P31947 37224961
    778891 8c41:A (2.393) BS01 dna 5.6.2.2 GO:0003677 ... P72525 N/A
    778892 8c41:A (2.393) BS02 dna 5.6.2.2 GO:0003677 ... P72525 N/A
    778893 8c41:A (2.393) BS03 MG 5.6.2.2 GO:0003677 ... P72525 N/A
    778894 8c41:A (2.393) BS04 TE9 5.6.2.2 GO:0003677 ... P72525 N/A
    778895 8c41:B (2.393) BS01 dna 5.6.2.2 GO:0003677 ... P72525 N/A
    778896 8c41:B (2.393) BS02 dna 5.6.2.2 GO:0003677 ... P72525 N/A
    778897 8c41:B (2.393) BS03 MG 5.6.2.2 GO:0003677 ... P72525 N/A
    778898 8c41:B (2.393) BS04 TE9 5.6.2.2 GO:0003677 ... P72525 N/A
    778899 8c42:A (1.4) BS01 peptide ? GO:0000122 ... P31947 37224961
    778900 8c42:A (1.4) BS02 SIT ? GO:0000122 ... P31947 37224961
    778901 8c43:A (1.4) BS01 peptide ? GO:0000122 ... P31947 37224961
    778902 8c43:A (1.4) BS02 SIT ? GO:0000122 ... P31947 37224961
    778903 8c45:A (3.5) BS01 SAM N/A GO:0003676 ... A0A6C7IK61 39174540
    778904 8c45:B (3.5) BS01 SAM N/A GO:0003676 ... A0A6C7IK61 39174540
    778905 8c46:A (2.0) BS01 ZN 3.5.1.6 GO:0016787 ... A0A8F7I7M8 37634202
    778906 8c46:A (2.0) BS02 ZN 3.5.1.6 GO:0016787 ... A0A8F7I7M8 37634202
    778907 8c46:B (2.0) BS01 ZN 3.5.1.6 GO:0016787 ... A0A8F7I7M8 37634202
    778908 8c46:B (2.0) BS02 ZN 3.5.1.6 GO:0016787 ... A0A8F7I7M8 37634202
    778909 8c47:A (2.2) BS01 ATP 3.6.4.- GO:0005524 ... P45520 38340794
    778910 8c48:A (1.4) BS01 MAN 3.2.1.- GO:0004348 ... G2Q1N4 38678481
    778911 8c48:A (1.4) BS02 MAN 3.2.1.- GO:0004348 ... G2Q1N4 38678481
    778912 8c48:A (1.4) BS03 XYP 3.2.1.- GO:0004348 ... G2Q1N4 38678481
    778913 8c48:A (1.4) BS04 XYP 3.2.1.- GO:0004348 ... G2Q1N4 38678481
    778914 8c48:A (1.4) BS05 XYP 3.2.1.- GO:0004348 ... G2Q1N4 38678481
    778915 8c48:A (1.4) BS06 XYP 3.2.1.- GO:0004348 ... G2Q1N4 38678481
    778916 8c48:A (1.4) BS07 XYP 3.2.1.- GO:0004348 ... G2Q1N4 38678481
    778917 8c48:A (1.4) BS08 XYP 3.2.1.- GO:0004348 ... G2Q1N4 38678481
    778918 8c48:B (1.4) BS01 XYP 3.2.1.- GO:0004348 ... G2Q1N4 38678481
    778919 8c48:B (1.4) BS02 XYP 3.2.1.- GO:0004348 ... G2Q1N4 38678481
    778920 8c49:A (1.82) BS01 ANP 6.1.1.26 GO:0004812 ... M9SC49 37051694
    778921 8c49:A (1.82) BS02 MG 6.1.1.26 GO:0004812 ... M9SC49 37051694
    778922 8c49:A (1.82) BS03 MG 6.1.1.26 GO:0004812 ... M9SC49 37051694
    778923 8c49:A (1.82) BS04 MG 6.1.1.26 GO:0004812 ... M9SC49 37051694
    778924 8c49:B (1.82) BS01 ANP 6.1.1.26 GO:0004812 ... M9SC49 37051694
    778925 8c49:B (1.82) BS02 MG 6.1.1.26 GO:0004812 ... M9SC49 37051694
    778926 8c49:B (1.82) BS03 MG 6.1.1.26 GO:0004812 ... M9SC49 37051694
    778927 8c4c:A (2.7) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38064550
    778928 8c4c:A (2.7) BS02 PO4 3.6.4.- GO:0001725 ... P68139 38064550
    778929 8c4c:B (2.7) BS01 PO4 3.6.4.- GO:0001725 ... P68139 38064550
    778930 8c4c:B (2.7) BS02 ADP 3.6.4.- GO:0001725 ... P68139 38064550
    778931 8c4c:C (2.7) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38064550
    778932 8c4c:C (2.7) BS02 PO4 3.6.4.- GO:0001725 ... P68139 38064550
    778933 8c4c:D (2.7) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38064550
    778934 8c4c:D (2.7) BS02 PO4 3.6.4.- GO:0001725 ... P68139 38064550
    778935 8c4c:E (2.7) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38064550
    778936 8c4c:E (2.7) BS02 PO4 3.6.4.- GO:0001725 ... P68139 38064550
    778937 8c4c:F (2.7) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38064550
    778938 8c4c:F (2.7) BS02 PO4 3.6.4.- GO:0001725 ... P68139 38064550
    778939 8c4c:G (2.7) BS01 PO4 3.6.4.- GO:0001725 ... P68139 38064550
    778940 8c4c:G (2.7) BS02 ADP 3.6.4.- GO:0001725 ... P68139 38064550
    778941 8c4c:H (2.7) BS01 PO4 3.6.4.- GO:0001725 ... P68139 38064550
    778942 8c4c:H (2.7) BS02 ADP 3.6.4.- GO:0001725 ... P68139 38064550
    778943 8c4d:A (1.97) BS01 ZN ? GO:0008745 ... N/A 37156923
    778944 8c4e:A (2.6) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38064550
    778945 8c4e:A (2.6) BS02 PO4 3.6.4.- GO:0001725 ... P68139 38064550
    778946 8c4e:B (2.6) BS01 PO4 3.6.4.- GO:0001725 ... P68139 38064550
    778947 8c4e:B (2.6) BS02 ADP 3.6.4.- GO:0001725 ... P68139 38064550
    778948 8c4e:C (2.6) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38064550
    778949 8c4e:D (2.6) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38064550
    778950 8c4e:D (2.6) BS02 PO4 3.6.4.- GO:0001725 ... P68139 38064550
    778951 8c4e:E (2.6) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38064550
    778952 8c4e:F (2.6) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38064550
    778953 8c4e:G (2.6) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38064550
    778954 8c4e:H (2.6) BS01 PO4 3.6.4.- GO:0001725 ... P68139 38064550
    778955 8c4e:H (2.6) BS02 ADP 3.6.4.- GO:0001725 ... P68139 38064550
    778956 8c4f:A (1.4) BS01 peptide ? GO:0000122 ... P31947 37455289
    778957 8c4f:A (1.4) BS02 TG9 ? GO:0000122 ... P31947 37455289
    778958 8c4g:A (1.46) BS01 peptide ? GO:0000122 ... P31947 37455289
    778959 8c4g:A (1.46) BS02 KM8 ? GO:0000122 ... P31947 37455289
    778960 8c4h:A (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    778961 8c4h:B (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    778962 8c4h:C (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    778963 8c4h:D (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    778964 8c4h:E (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    778965 8c4h:F (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    778966 8c4h:G (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    778967 8c4h:H (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    778968 8c4h:I (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    778969 8c4h:J (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    778970 8c4h:K (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    778971 8c4h:L (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    778972 8c4h:M (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    778973 8c4h:N (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    778974 8c4h:a (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    778975 8c4h:b (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    778976 8c4h:c (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    778977 8c4h:d (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    778978 8c4h:e (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    778979 8c4h:f (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    778980 8c4h:g (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    778981 8c4h:h (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    778982 8c4h:i (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    778983 8c4h:j (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    778984 8c4h:k (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    778985 8c4h:l (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    778986 8c4h:m (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    778987 8c4h:n (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    778988 8c4j:A (1.83) BS01 TI5 2.7.7.85 GO:0004016 ... Q8Y5E4 37223749
    778989 8c4j:B (1.83) BS01 TI5 2.7.7.85 GO:0004016 ... Q8Y5E4 37223749
    778990 8c4l:A (1.86) BS01 FAD ? GO:0000166 ... A0A220UGT4 N/A
    778991 8c4l:B (1.86) BS01 FAD ? GO:0000166 ... A0A220UGT4 N/A
    778992 8c4m:A (1.51) BS01 ADN 2.7.7.85 GO:0004016 ... Q8Y5E4 37223749
    778993 8c4n:A (1.75) BS01 AMP 2.7.7.85 GO:0004016 ... Q8Y5E4 37223749
    778994 8c4n:B (1.75) BS01 AMP 2.7.7.85 GO:0004016 ... Q8Y5E4 37223749
    778995 8c4o:A (1.97) BS01 ATP 2.7.7.85 GO:0004016 ... Q8Y5E4 37223749
    778996 8c4o:B (1.97) BS01 ATP 2.7.7.85 GO:0004016 ... Q8Y5E4 37223749
    778997 8c4p:A (1.2) BS01 TJ9 2.7.7.85 GO:0004016 ... Q8Y5E4 37223749
    778998 8c4p:B (1.2) BS01 TJ9 2.7.7.85 GO:0004016 ... Q8Y5E4 37223749
    778999 8c4r:A (1.55) BS01 ADE 2.7.7.85 GO:0004016 ... Q8Y5E4 37223749
    779000 8c4t:A (3.23) BS01 rna 2.7.7.48
    3.1.-.-
    GO:0000166 ... P23456 37221161

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).