SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    779001 8blj:F (2.18) BS01 CA ? GO:0015276 ... Q9ULK0 38060673
    779002 8blj:F (2.18) BS02 CA ? GO:0015276 ... Q9ULK0 38060673
    779003 8blo:A (2.9) BS01 LMN ? GO:0005515 ... Q15849 37774028
    779004 8blo:A (2.9) BS02 LMN ? GO:0005515 ... Q15849 37774028
    779005 8blo:A (2.9) BS03 LMN ? GO:0005515 ... Q15849 37774028
    779006 8blo:B (2.9) BS01 LMN ? GO:0005515 ... Q15849 37774028
    779007 8blo:B (2.9) BS02 LMN ? GO:0005515 ... Q15849 37774028
    779008 8blo:B (2.9) BS03 LMN ? GO:0005515 ... Q15849 37774028
    779009 8blo:C (2.9) BS01 LMN ? GO:0005515 ... Q15849 37774028
    779010 8blo:C (2.9) BS02 LMN ? GO:0005515 ... Q15849 37774028
    779011 8blo:C (2.9) BS03 LMN ? GO:0005515 ... Q15849 37774028
    779012 8blp:A (2.6) BS01 5D3 ? GO:0005372 ... Q13336 37774028
    779013 8blp:A (2.6) BS02 5D3 ? GO:0005372 ... Q13336 37774028
    779014 8blp:A (2.6) BS03 Y01 ? GO:0005372 ... Q13336 37774028
    779015 8blp:A (2.6) BS04 Y01 ? GO:0005372 ... Q13336 37774028
    779016 8blp:B (2.6) BS01 Y01 ? GO:0005372 ... Q13336 37774028
    779017 8blp:B (2.6) BS02 5D3 ? GO:0005372 ... Q13336 37774028
    779018 8blp:B (2.6) BS03 5D3 ? GO:0005372 ... Q13336 37774028
    779019 8blp:B (2.6) BS04 Y01 ? GO:0005372 ... Q13336 37774028
    779020 8blp:C (2.6) BS01 Y01 ? GO:0005372 ... Q13336 37774028
    779021 8blp:C (2.6) BS02 Y01 ? GO:0005372 ... Q13336 37774028
    779022 8blp:C (2.6) BS03 5D3 ? GO:0005372 ... Q13336 37774028
    779023 8blp:C (2.6) BS04 5D3 ? GO:0005372 ... Q13336 37774028
    779024 8blr:A (1.4) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 39179604
    779025 8bls:A (2.1) BS01 GCH ? GO:0045302 ... J7H3P9 36963397
    779026 8bls:B (2.1) BS01 GCH ? GO:0045302 ... J7H3P9 36963397
    779027 8bls:C (2.1) BS01 GCH ? GO:0045302 ... J7H3P9 36963397
    779028 8bls:D (2.1) BS01 GCH ? GO:0045302 ... J7H3P9 36963397
    779029 8bls:E (2.1) BS01 GCH ? GO:0045302 ... J7H3P9 36963397
    779030 8bls:F (2.1) BS01 GCH ? GO:0045302 ... J7H3P9 36963397
    779031 8bls:G (2.1) BS01 GCH ? GO:0045302 ... J7H3P9 36963397
    779032 8bls:H (2.1) BS01 GCH ? GO:0045302 ... J7H3P9 36963397
    779033 8bls:H (2.1) BS02 GCH ? GO:0045302 ... J7H3P9 36963397
    779034 8blt:A (2.1) BS01 TCH ? GO:0045302 ... J7H3P9 36963397
    779035 8blt:B (2.1) BS01 TCH ? GO:0045302 ... J7H3P9 36963397
    779036 8blt:B (2.1) BS02 TCH ? GO:0045302 ... J7H3P9 36963397
    779037 8blt:C (2.1) BS01 TCH ? GO:0045302 ... J7H3P9 36963397
    779038 8blt:D (2.1) BS01 TCH ? GO:0045302 ... J7H3P9 36963397
    779039 8blt:D (2.1) BS02 TCH ? GO:0045302 ... J7H3P9 36963397
    779040 8blt:E (2.1) BS01 TCH ? GO:0045302 ... J7H3P9 36963397
    779041 8blt:F (2.1) BS01 TCH ? GO:0045302 ... J7H3P9 36963397
    779042 8blt:G (2.1) BS01 TCH ? GO:0045302 ... J7H3P9 36963397
    779043 8blt:G (2.1) BS02 TCH ? GO:0045302 ... J7H3P9 36963397
    779044 8blt:H (2.1) BS01 TCH ? GO:0045302 ... J7H3P9 36963397
    779045 8blu:B (1.5) BS01 DGL ? N/A O00560 N/A
    779046 8blu:C (1.5) BS01 GLY ? N/A O00560 N/A
    779047 8blu:C (1.5) BS02 GLY ? N/A O00560 N/A
    779048 8blu:C (1.5) BS03 GLY ? N/A O00560 N/A
    779049 8blu:D (1.5) BS01 GLY ? N/A O00560 N/A
    779050 8blu:D (1.5) BS02 DGL ? N/A O00560 N/A
    779051 8blu:D (1.5) BS03 ALA ? N/A O00560 N/A
    779052 8blv:A (1.5) BS01 peptide ? N/A O00560 N/A
    779053 8blv:B (1.5) BS01 peptide ? N/A O00560 N/A
    779054 8blw:B (3.22) BS01 GAL ? N/A Q8A7N4 37543597
    779055 8blx:A (1.71) BS01 FAD ? GO:0008115 ... Q0UIL6 37903872
    779056 8bly:A (3.2) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779057 8bly:B (3.2) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779058 8bly:C (3.2) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779059 8bly:D (3.2) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779060 8bly:E (3.2) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779061 8bly:F (3.2) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779062 8bly:G (3.2) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779063 8bly:H (3.2) BS01 MG 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779064 8bly:H (3.2) BS02 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779065 8bly:I (3.2) BS01 MG 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779066 8bly:I (3.2) BS02 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779067 8bly:J (3.2) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779068 8bly:K (3.2) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779069 8bly:L (3.2) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779070 8bly:M (3.2) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779071 8bly:N (3.2) BS01 MG 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779072 8bly:N (3.2) BS02 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779073 8blz:C (1.7) BS01 FAD ? GO:0008115 ... Q0UIL6 37903872
    779074 8bm0:A (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779075 8bm0:C (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779076 8bm0:D (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779077 8bm0:F (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779078 8bm0:G (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779079 8bm0:H (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779080 8bm0:I (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779081 8bm0:K (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779082 8bm0:L (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779083 8bm0:N (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779084 8bm0:O (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779085 8bm0:Q (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779086 8bm0:R (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779087 8bm0:T (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779088 8bm1:A (2.7) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779089 8bm1:C (2.7) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779090 8bm1:D (2.7) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779091 8bm1:F (2.7) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779092 8bm1:G (2.7) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779093 8bm1:H (2.7) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779094 8bm1:I (2.7) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779095 8bm1:K (2.7) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779096 8bm1:L (2.7) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779097 8bm1:N (2.7) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779098 8bm1:O (2.7) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779099 8bm1:Q (2.7) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779100 8bm1:R (2.7) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779101 8bm1:T (2.7) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779102 8bm2:A (1.5) BS01 QQC 2.7.10.2 GO:0004672 ... O60674 38843875
    779103 8bm2:B (1.5) BS01 QQC 2.7.10.2 GO:0004672 ... O60674 38843875
    779104 8bm3:A (3.5) BS01 FPP 3.1.3.27
    3.1.3.4
    3.6.1.27
    3.6.1.75
    GO:0000810 ... P0A924 N/A
    779105 8bm3:B (3.5) BS01 FPP 3.1.3.27
    3.1.3.4
    3.6.1.27
    3.6.1.75
    GO:0000810 ... P0A924 N/A
    779106 8bm3:C (3.5) BS01 FPP 3.1.3.27
    3.1.3.4
    3.6.1.27
    3.6.1.75
    GO:0000810 ... P0A924 N/A
    779107 8bm3:D (3.5) BS01 FPP 3.1.3.27
    3.1.3.4
    3.6.1.27
    3.6.1.75
    GO:0000810 ... P0A924 N/A
    779108 8bm5:A (1.4) BS01 peptide ? GO:0001836 ... P31947 36926879
    779109 8bm5:A (1.4) BS02 QQ0 ? GO:0001836 ... P31947 36926879
    779110 8bm8:A (1.68) BS01 QT1 2.7.10.1 GO:0004672 ... P29317 36799129
    779111 8bmd:A (2.8) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779112 8bmd:B (2.8) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779113 8bmd:C (2.8) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779114 8bmd:D (2.8) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779115 8bmd:E (2.8) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779116 8bmd:F (2.8) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779117 8bmd:G (2.8) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779118 8bmd:H (2.8) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779119 8bmd:I (2.8) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779120 8bmd:J (2.8) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779121 8bmd:K (2.8) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779122 8bmd:L (2.8) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779123 8bmd:M (2.8) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779124 8bmd:N (2.8) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779125 8bmo:A (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779126 8bmo:B (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779127 8bmo:C (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779128 8bmo:E (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779129 8bmo:F (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779130 8bmo:H (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779131 8bmo:I (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779132 8bmo:J (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779133 8bmo:L (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779134 8bmo:M (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779135 8bmo:O (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779136 8bmo:P (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779137 8bmo:R (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779138 8bmo:S (3.4) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779139 8bmp:A (3.2) BS01 ATP 7.-.-.- GO:0005524 ... Q1GBJ0 37491368
    779140 8bmp:B (3.2) BS01 ADP 3.6.3.- GO:0005524 ... Q1GBI9 37491368
    779141 8bmq:A (3.6) BS01 ANP 7.-.-.- GO:0005524 ... Q1GBJ0 37491368
    779142 8bmq:B (3.6) BS01 ANP 3.6.3.- GO:0005524 ... Q1GBI9 37491368
    779143 8bms:A (2.6) BS01 ATP 7.-.-.- GO:0005524 ... Q1GBJ0 37491368
    779144 8bms:A (2.6) BS02 MG 7.-.-.- GO:0005524 ... Q1GBJ0 37491368
    779145 8bms:A (2.6) BS03 ATP 7.-.-.- GO:0005524 ... Q1GBJ0 37491368
    779146 8bms:B (2.6) BS01 ATP 3.6.3.- GO:0005524 ... Q1GBI9 37491368
    779147 8bms:B (2.6) BS02 ATP 3.6.3.- GO:0005524 ... Q1GBI9 37491368
    779148 8bms:B (2.6) BS03 MG 3.6.3.- GO:0005524 ... Q1GBI9 37491368
    779149 8bmt:A (2.5) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779150 8bmt:BA (2.5) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779151 8bmt:C (2.5) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779152 8bmt:E (2.5) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779153 8bmt:G (2.5) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779154 8bmt:I (2.5) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779155 8bmt:J (2.5) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779156 8bmt:L (2.5) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779157 8bmt:N (2.5) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779158 8bmt:P (2.5) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779159 8bmt:R (2.5) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779160 8bmt:T (2.5) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779161 8bmt:X (2.5) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779162 8bmt:Z (2.5) BS01 ATP 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    779163 8bmu:A (1.6) BS01 FAD ? GO:0008115 ... Q0UIL6 37903872
    779164 8bmv:A (1.95) BS01 URC N/A N/A Q88R14 38997289
    779165 8bmv:B (1.95) BS01 URC N/A N/A Q88R14 38997289
    779166 8bmw:F (3.5) BS01 rna ? N/A Q97YA7 36843655
    779167 8bmw:G (3.5) BS01 rna ? N/A Q97YA7 36843655
    779168 8bmw:H (3.5) BS01 rna ? N/A Q97YA6 36843655
    779169 8bmw:I (3.5) BS01 rna ? N/A Q97YA6 36843655
    779170 8bmw:J (3.5) BS01 rna ? N/A Q97YA5 36843655
    779171 8bmw:L (3.5) BS01 rna ? N/A Q97YA2 36843655
    779172 8bmw:M (3.5) BS01 rna ? N/A Q97YA1 36843655
    779173 8bmw:N (3.5) BS01 rna ? N/A Q97YA0 36843655
    779174 8bmy:A (1.72) BS01 CNC ? N/A Q8A6D0 37543597
    779175 8bmy:B (1.72) BS01 CNC ? N/A Q8A6D0 37543597
    779176 8bmz:A (2.3) BS01 B1Z ? N/A Q8A6D0 37543597
    779177 8bmz:B (2.3) BS01 B1Z ? N/A Q8A6D0 37543597
    779178 8bn0:A (1.33) BS01 CBY ? N/A Q8A6D0 37543597
    779179 8bn1:A (2.61) BS01 peptide 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 37433017
    779180 8bn1:A (2.61) BS02 ZN 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 37433017
    779181 8bn1:B (2.61) BS01 peptide 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 37433017
    779182 8bn1:B (2.61) BS02 ZN 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 37433017
    779183 8bn2:A (1.63) BS01 CA ? GO:0015276 ... Q9ULK0 38060673
    779184 8bn2:A (1.63) BS02 DSN ? GO:0015276 ... Q9ULK0 38060673
    779185 8bn2:B (1.63) BS01 CA ? GO:0015276 ... Q9ULK0 38060673
    779186 8bn3:B (2.4) BS01 rna ? GO:0000055 ... P0CX43 38324474
    779187 8bn3:C0 (2.4) BS01 rna ? GO:0000054 ... Q08745 38324474
    779188 8bn3:C1 (2.4) BS01 rna ? GO:0000028 ... P0CX47 38324474
    779189 8bn3:C3 (2.4) BS01 rna ? GO:0000462 ... P05756 38324474
    779190 8bn3:C3 (2.4) BS02 rna ? GO:0000462 ... P05756 38324474
    779191 8bn3:C4 (2.4) BS01 rna ? GO:0000028 ... P39516 38324474
    779192 8bn3:C5 (2.4) BS01 rna ? GO:0003723 ... Q01855 38324474
    779193 8bn3:C6 (2.4) BS01 rna ? GO:0000462 ... P0CX51 38324474
    779194 8bn3:C7 (2.4) BS01 rna ? GO:0003735 ... P02407 38324474
    779195 8bn3:C8 (2.4) BS01 rna ? GO:0000054 ... P0CX55 38324474
    779196 8bn3:C9 (2.4) BS01 rna ? GO:0000054 ... P07280 38324474
    779197 8bn3:D0 (2.4) BS01 rna ? GO:0003723 ... P38701 38324474
    779198 8bn3:D1 (2.4) BS01 rna ? GO:0000447 ... P0C0V8 38324474
    779199 8bn3:D2 (2.4) BS01 rna ? GO:0002181 ... P0C0W1 38324474
    779200 8bn3:D3 (2.4) BS01 rna ? GO:0000462 ... P0CX29 38324474

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).