SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    780001 8bqr:A (2.32) BS01 R9H 3.2.1.17 GO:0003796 ... P00698 37102318
    780002 8bqs:A0 (2.9) BS01 UDP 2.4.1.182 GO:0005543 ... Q22E24 36949187
    780003 8bqs:A1 (2.9) BS01 NDP ? GO:0005739 ... I7MLH2 36949187
    780004 8bqs:A5 (2.9) BS01 ADP ? N/A I7MIJ7 36949187
    780005 8bqs:A8 (2.9) BS01 ADP N/A N/A N/A 36949187
    780006 8bqs:AB (2.9) BS01 FES ? GO:0008137 ... Q23KA9 36949187
    780007 8bqs:AB (2.9) BS02 SF4 ? GO:0008137 ... Q23KA9 36949187
    780008 8bqs:AB (2.9) BS03 SF4 ? GO:0008137 ... Q23KA9 36949187
    780009 8bqs:AD (2.9) BS01 SF4 7.1.1.2 GO:0005739 ... Q23KE4 36949187
    780010 8bqs:AD (2.9) BS02 FMN 7.1.1.2 GO:0005739 ... Q23KE4 36949187
    780011 8bqs:AE (2.9) BS01 ADP 1.6.5.3 GO:0005739 ... Q951B1 36949187
    780012 8bqs:AI (2.9) BS01 FES ? GO:0003954 ... I7MEP0 36949187
    780013 8bqs:AL (2.9) BS01 SF4 ? GO:0003954 ... I7MDW5 36949187
    780014 8bqs:AL (2.9) BS02 SF4 ? GO:0003954 ... I7MDW5 36949187
    780015 8bqs:AQ (2.9) BS01 ADP ? N/A Q233X7 36949187
    780016 8bqs:AS (2.9) BS01 8Q1 ? GO:0005743 ... I7M2Y3 36949187
    780017 8bqs:AT (2.9) BS01 SF4 1.6.5.3 GO:0008137 ... Q951B4 36949187
    780018 8bqs:BC (2.9) BS01 ADP ? N/A I7M855 36949187
    780019 8bqs:BI (2.9) BS01 FES ? GO:0005739 ... Q22W11 36949187
    780020 8bqs:BR (2.9) BS01 ZN ? GO:0005739 ... I7MK02 36949187
    780021 8bqs:C (2.9) BS01 HEM 1.10.2.2 GO:0009055 ... Q950Z1 36949187
    780022 8bqs:C (2.9) BS02 HEM 1.10.2.2 GO:0009055 ... Q950Z1 36949187
    780023 8bqs:C (2.9) BS03 UQ8 1.10.2.2 GO:0009055 ... Q950Z1 36949187
    780024 8bqs:C (2.9) BS04 UQ8 1.10.2.2 GO:0009055 ... Q950Z1 36949187
    780025 8bqs:CA (2.9) BS01 CA 1.3.5.1 GO:0000104 ... Q23DI3 36949187
    780026 8bqs:CA (2.9) BS02 FAD 1.3.5.1 GO:0000104 ... Q23DI3 36949187
    780027 8bqs:CB (2.9) BS01 FES 1.3.5.1 GO:0005743 ... I7M403 36949187
    780028 8bqs:CB (2.9) BS02 SF4 1.3.5.1 GO:0005743 ... I7M403 36949187
    780029 8bqs:CB (2.9) BS03 F3S 1.3.5.1 GO:0005743 ... I7M403 36949187
    780030 8bqs:CB (2.9) BS04 CA 1.3.5.1 GO:0005743 ... I7M403 36949187
    780031 8bqs:CC (2.9) BS01 UQ8 ? N/A Q23RH8 36949187
    780032 8bqs:CE (2.9) BS01 HEC ? N/A Q24I09 36949187
    780033 8bqs:CN (2.9) BS01 UQ8 ? N/A W7XF00 36949187
    780034 8bqs:D (2.9) BS01 HEC ? GO:0005739 ... Q24IM5 36949187
    780035 8bqs:DA (2.9) BS01 CA 7.1.1.9 GO:0004129 ... Q950Y4 36949187
    780036 8bqs:DA (2.9) BS02 HEA 7.1.1.9 GO:0004129 ... Q950Y4 36949187
    780037 8bqs:DA (2.9) BS03 HEA 7.1.1.9 GO:0004129 ... Q950Y4 36949187
    780038 8bqs:DA (2.9) BS04 CU 7.1.1.9 GO:0004129 ... Q950Y4 36949187
    780039 8bqs:DA (2.9) BS05 MG 7.1.1.9 GO:0004129 ... Q950Y4 36949187
    780040 8bqs:DA (2.9) BS06 UQ8 7.1.1.9 GO:0004129 ... Q950Y4 36949187
    780041 8bqs:DA (2.9) BS07 UQ8 7.1.1.9 GO:0004129 ... Q950Y4 36949187
    780042 8bqs:DB (2.9) BS01 HEA 7.1.1.9 GO:0004129 ... Q950Y9 36949187
    780043 8bqs:DB (2.9) BS02 CUA 7.1.1.9 GO:0004129 ... Q950Y9 36949187
    780044 8bqs:DB (2.9) BS03 ATP 7.1.1.9 GO:0004129 ... Q950Y9 36949187
    780045 8bqs:DD (2.9) BS01 ZN ? GO:0005740 ... Q23FF5 36949187
    780046 8bqs:DE (2.9) BS01 UQ8 ? N/A W7XCY5 36949187
    780047 8bqs:DF (2.9) BS01 ATP ? N/A Q24I72 36949187
    780048 8bqs:DS (2.9) BS01 UQ8 ? GO:0016020 ... A4VDV3 36949187
    780049 8bqs:DS (2.9) BS02 UQ8 ? GO:0016020 ... A4VDV3 36949187
    780050 8bqs:Da (2.9) BS01 CA 7.1.1.9 GO:0004129 ... Q950Y4 36949187
    780051 8bqs:Da (2.9) BS02 HEA 7.1.1.9 GO:0004129 ... Q950Y4 36949187
    780052 8bqs:Da (2.9) BS03 HEA 7.1.1.9 GO:0004129 ... Q950Y4 36949187
    780053 8bqs:Da (2.9) BS04 CU 7.1.1.9 GO:0004129 ... Q950Y4 36949187
    780054 8bqs:Da (2.9) BS05 MG 7.1.1.9 GO:0004129 ... Q950Y4 36949187
    780055 8bqs:Da (2.9) BS06 UQ8 7.1.1.9 GO:0004129 ... Q950Y4 36949187
    780056 8bqs:Da (2.9) BS07 UQ8 7.1.1.9 GO:0004129 ... Q950Y4 36949187
    780057 8bqs:Db (2.9) BS01 CUA 7.1.1.9 GO:0004129 ... Q950Y9 36949187
    780058 8bqs:Db (2.9) BS02 ATP 7.1.1.9 GO:0004129 ... Q950Y9 36949187
    780059 8bqs:Dd (2.9) BS01 ZN ? GO:0005740 ... Q23FF5 36949187
    780060 8bqs:Ds (2.9) BS01 UQ8 ? GO:0016020 ... A4VDV3 36949187
    780061 8bqs:Ds (2.9) BS02 UQ8 ? GO:0016020 ... A4VDV3 36949187
    780062 8bqs:E (2.9) BS01 FES ? GO:0016020 ... I7MIC7 36949187
    780063 8bqs:ED (2.9) BS01 HEM ? N/A Q951A7 36949187
    780064 8bqs:ED (2.9) BS02 UQ8 ? N/A Q951A7 36949187
    780065 8bqs:EF (2.9) BS01 FES ? GO:0005737 ... I7M8P0 36949187
    780066 8bqs:EF (2.9) BS02 FES ? GO:0005737 ... I7M8P0 36949187
    780067 8bqs:EL (2.9) BS01 UQ8 ? N/A Q23VY4 36949187
    780068 8bqs:EN (2.9) BS01 UQ8 ? N/A I7MFV5 36949187
    780069 8bqs:ER (2.9) BS01 ATP ? N/A I7M9E7 36949187
    780070 8bqs:Ed (2.9) BS01 HEM ? N/A Q951A7 36949187
    780071 8bqs:Ed (2.9) BS02 UQ8 ? N/A Q951A7 36949187
    780072 8bqs:Ef (2.9) BS01 FES ? GO:0005737 ... I7M8P0 36949187
    780073 8bqs:Ef (2.9) BS02 FES ? GO:0005737 ... I7M8P0 36949187
    780074 8bqs:Ek (2.9) BS01 UQ8 ? N/A Q230X6 36949187
    780075 8bqs:El (2.9) BS01 UQ8 ? N/A Q23VY4 36949187
    780076 8bqs:En (2.9) BS01 UQ8 ? N/A I7MFV5 36949187
    780077 8bqs:Er (2.9) BS01 ATP ? N/A I7M9E7 36949187
    780078 8bqs:c (2.9) BS01 UQ8 1.10.2.2 GO:0009055 ... Q950Z1 36949187
    780079 8bqs:c (2.9) BS02 HEM 1.10.2.2 GO:0009055 ... Q950Z1 36949187
    780080 8bqs:c (2.9) BS03 HEM 1.10.2.2 GO:0009055 ... Q950Z1 36949187
    780081 8bqs:c (2.9) BS04 UQ8 1.10.2.2 GO:0009055 ... Q950Z1 36949187
    780082 8bqs:d (2.9) BS01 HEC ? GO:0005739 ... Q24IM5 36949187
    780083 8bqs:e (2.9) BS01 FES ? GO:0016020 ... I7MIC7 36949187
    780084 8bqt:A (1.47) BS01 U7U 3.2.1.17 GO:0003796 ... P00698 37102318
    780085 8bqt:A (1.47) BS02 U7U 3.2.1.17 GO:0003796 ... P00698 37102318
    780086 8bqx:A (3.8) BS01 rna ? GO:0000054 ... P05750 37079644
    780087 8bqx:AA (3.8) BS01 rna ? GO:0000470 ... P17076 37079644
    780088 8bqx:AA (3.8) BS02 rna ? GO:0000470 ... P17076 37079644
    780089 8bqx:AB (3.8) BS01 rna ? GO:0002181 ... P0CX41 37079644
    780090 8bqx:AB (3.8) BS02 rna ? GO:0002181 ... P0CX41 37079644
    780091 8bqx:AC (3.8) BS01 rna ? GO:0000470 ... P05745 37079644
    780092 8bqx:AD (3.8) BS01 rna ? GO:0002181 ... P05738 37079644
    780093 8bqx:AE (3.8) BS01 rna ? GO:0003735 ... P04449 37079644
    780094 8bqx:AE (3.8) BS02 rna ? GO:0003735 ... P04449 37079644
    780095 8bqx:AF (3.8) BS01 rna ? GO:0000448 ... P49166 37079644
    780096 8bqx:AF (3.8) BS02 rna ? GO:0000448 ... P49166 37079644
    780097 8bqx:AF (3.8) BS03 ZN ? GO:0000448 ... P49166 37079644
    780098 8bqx:AG (3.8) BS01 rna ? GO:0000027 ... P0C0W9 37079644
    780099 8bqx:AG (3.8) BS02 rna ? GO:0000027 ... P0C0W9 37079644
    780100 8bqx:AH (3.8) BS01 rna ? GO:0003735 ... P04456 37079644
    780101 8bqx:AH (3.8) BS02 rna ? GO:0003735 ... P04456 37079644
    780102 8bqx:AI (3.8) BS01 rna ? GO:0002181 ... P49167 37079644
    780103 8bqx:AJ (3.8) BS01 rna ? GO:0002181 ... Q12690 37079644
    780104 8bqx:AJ (3.8) BS02 rna ? GO:0002181 ... Q12690 37079644
    780105 8bqx:AK (3.8) BS01 rna ? GO:0002181 ... P05743 37079644
    780106 8bqx:AK (3.8) BS02 rna ? GO:0002181 ... P05743 37079644
    780107 8bqx:AL (3.8) BS01 rna ? GO:0002181 ... P04650 37079644
    780108 8bqx:AL (3.8) BS02 rna ? GO:0002181 ... P04650 37079644
    780109 8bqx:AM (3.8) BS01 rna ? GO:0000027 ... P36105 37079644
    780110 8bqx:AN (3.8) BS01 rna ? GO:0002181 ... P0C2H6 37079644
    780111 8bqx:AO (3.8) BS01 rna ? GO:0003735 ... P0CH08 37079644
    780112 8bqx:AO (3.8) BS02 ZN ? GO:0003735 ... P0CH08 37079644
    780113 8bqx:AP (3.8) BS01 rna ? GO:0002181 ... P0CX27 37079644
    780114 8bqx:AP (3.8) BS02 ZN ? GO:0002181 ... P0CX27 37079644
    780115 8bqx:AQ (3.8) BS01 rna ? GO:0000470 ... P05748 37079644
    780116 8bqx:AQ (3.8) BS02 rna ? GO:0000470 ... P05748 37079644
    780117 8bqx:AR (3.8) BS01 rna ? GO:0002181 ... P02406 37079644
    780118 8bqx:AT (3.8) BS01 rna ? GO:0002181 ... P0CX25 37079644
    780119 8bqx:AT (3.8) BS02 ZN ? GO:0002181 ... P0CX25 37079644
    780120 8bqx:AU (3.8) BS01 rna ? GO:0000470 ... P26784 37079644
    780121 8bqx:AV (3.8) BS01 rna ? GO:0002181 ... P05747 37079644
    780122 8bqx:AW (3.8) BS01 rna ? GO:0002181 ... P0CX45 37079644
    780123 8bqx:AX (3.8) BS01 rna ? GO:0000448 ... P05740 37079644
    780124 8bqx:AX (3.8) BS02 rna ? GO:0000448 ... P05740 37079644
    780125 8bqx:AY (3.8) BS01 rna ? GO:0002181 ... P14120 37079644
    780126 8bqx:B (3.8) BS01 rna ? GO:0000054 ... P26783 37079644
    780127 8bqx:BA (3.8) BS01 rna ? GO:0000027 ... P14126 37079644
    780128 8bqx:BB (3.8) BS01 rna ? GO:0002181 ... P0CX49 37079644
    780129 8bqx:BC (3.8) BS01 rna ? GO:0002181 ... P0C2H8 37079644
    780130 8bqx:BD (3.8) BS01 rna ? GO:0000027 ... P41805 37079644
    780131 8bqx:BD (3.8) BS02 rna ? GO:0000027 ... P41805 37079644
    780132 8bqx:BE (3.8) BS01 rna ? GO:0002181 ... P10664 37079644
    780133 8bqx:BE (3.8) BS02 rna ? GO:0002181 ... P10664 37079644
    780134 8bqx:BF (3.8) BS01 rna ? GO:0002181 ... P0CX82 37079644
    780135 8bqx:BF (3.8) BS02 rna ? GO:0002181 ... P0CX82 37079644
    780136 8bqx:BG (3.8) BS01 rna ? GO:0002181 ... P38061 37079644
    780137 8bqx:BH (3.8) BS01 rna ? GO:0002181 ... P0CX23 37079644
    780138 8bqx:BH (3.8) BS02 rna ? GO:0002181 ... P0CX23 37079644
    780139 8bqx:BI (3.8) BS01 rna ? GO:0000027 ... P26321 37079644
    780140 8bqx:BI (3.8) BS02 rna ? GO:0000027 ... P26321 37079644
    780141 8bqx:BJ (3.8) BS01 rna ? GO:0002181 ... Q02753 37079644
    780142 8bqx:BJ (3.8) BS02 rna ? GO:0002181 ... Q02753 37079644
    780143 8bqx:BK (3.8) BS01 rna ? GO:0000027 ... P05744 37079644
    780144 8bqx:BL (3.8) BS01 rna ? GO:0003735 ... P05749 37079644
    780145 8bqx:BM (3.8) BS01 rna ? GO:0000027 ... P05739 37079644
    780146 8bqx:BN (3.8) BS01 rna ? GO:0002181 ... P87262 37079644
    780147 8bqx:BN (3.8) BS02 ZN ? GO:0002181 ... P87262 37079644
    780148 8bqx:BO (3.8) BS01 rna ? GO:0000463 ... P05737 37079644
    780149 8bqx:BO (3.8) BS02 rna ? GO:0000463 ... P05737 37079644
    780150 8bqx:BP (3.8) BS01 rna ? GO:0000463 ... P0CX84 37079644
    780151 8bqx:BP (3.8) BS02 rna ? GO:0000463 ... P0CX84 37079644
    780152 8bqx:BT (3.8) BS01 rna ? GO:0000055 ... P0CX43 37079644
    780153 8bqx:C (3.8) BS01 rna ? N/A Q08745 37079644
    780154 8bqx:D (3.8) BS01 rna ? GO:0003735 ... P48589 37079644
    780155 8bqx:E (3.8) BS01 rna ? GO:0000054 ... Q01855 37079644
    780156 8bqx:F (3.8) BS01 rna ? GO:0000462 ... P0CX51 37079644
    780157 8bqx:G (3.8) BS01 rna ? GO:0000028 ... P02407 37079644
    780158 8bqx:H (3.8) BS01 rna ? GO:0000054 ... P0CX55 37079644
    780159 8bqx:I (3.8) BS01 rna ? GO:0000054 ... P07280 37079644
    780160 8bqx:J (3.8) BS01 rna ? GO:0003723 ... P38701 37079644
    780161 8bqx:K (3.8) BS01 rna ? N/A Q3E792 37079644
    780162 8bqx:L (3.8) BS01 rna ? GO:0000028 ... Q3E7X9 37079644
    780163 8bqx:M (3.8) BS01 rna ? GO:0002181 ... P41057 37079644
    780164 8bqx:M (3.8) BS02 ZN ? GO:0002181 ... P41057 37079644
    780165 8bqx:N (3.8) BS01 rna ? GO:0003735 ... P05759 37079644
    780166 8bqx:N (3.8) BS02 ZN ? GO:0003735 ... P05759 37079644
    780167 8bqx:O (3.8) BS01 rna ? GO:0001965 ... P38011 37079644
    780168 8bqx:P (3.8) BS01 rna ? GO:0003735 ... P32905 37079644
    780169 8bqx:Q (3.8) BS01 rna ? GO:0000462 ... P33442 37079644
    780170 8bqx:R (3.8) BS01 rna ? GO:0003723 ... P25443 37079644
    780171 8bqx:S (3.8) BS01 rna ? GO:0002181 ... P0CX35 37079644
    780172 8bqx:T (3.8) BS01 rna ? GO:0000462 ... P0CX37 37079644
    780173 8bqx:U (3.8) BS01 rna ? GO:0002181 ... P26786 37079644
    780174 8bqx:V (3.8) BS01 rna ? GO:0000462 ... P0CX39 37079644
    780175 8bqx:V (3.8) BS02 rna ? GO:0000462 ... P0CX39 37079644
    780176 8bqx:W (3.8) BS01 rna ? GO:0000462 ... O13516 37079644
    780177 8bqx:X (3.8) BS01 rna ? GO:0000028 ... P0CX47 37079644
    780178 8bqx:Y (3.8) BS01 rna ? GO:0000462 ... P05756 37079644
    780179 8bqx:Y (3.8) BS02 rna ? GO:0000462 ... P05756 37079644
    780180 8bqx:Z (3.8) BS01 rna ? GO:0000028 ... P39516 37079644
    780181 8bqx:a (3.8) BS01 rna ? GO:0000447 ... P0C0V8 37079644
    780182 8bqx:b (3.8) BS01 rna ? GO:0002181 ... P0C0W1 37079644
    780183 8bqx:c (3.8) BS01 rna ? GO:0000462 ... P0CX29 37079644
    780184 8bqx:d (3.8) BS01 rna ? GO:0000462 ... P0CX31 37079644
    780185 8bqx:e (3.8) BS01 rna ? GO:0003735 ... P39939 37079644
    780186 8bqx:f (3.8) BS01 rna ? GO:0000028 ... P35997 37079644
    780187 8bqx:g (3.8) BS01 rna ? GO:0002181 ... P0CX33 37079644
    780188 8bqx:x (3.8) BS01 rna 3.4.11.18 GO:0003729 ... Q01662 37079644
    780189 8br0:A (2.218) BS01 LAB 3.6.4.- GO:0000287 ... P68135 37747912
    780190 8br0:A (2.218) BS02 ADP 3.6.4.- GO:0000287 ... P68135 37747912
    780191 8br0:B (2.218) BS01 MN 4.6.1.1 GO:0000774 ... A0A9P1NJI6
    P07737
    37747912
    780192 8br0:B (2.218) BS02 MN 4.6.1.1 GO:0000774 ... A0A9P1NJI6
    P07737
    37747912
    780193 8br0:B (2.218) BS03 CH1 4.6.1.1 GO:0000774 ... A0A9P1NJI6
    P07737
    37747912
    780194 8br0:C (2.218) BS01 LAB 3.6.4.- GO:0000287 ... P68135 37747912
    780195 8br0:C (2.218) BS02 ADP 3.6.4.- GO:0000287 ... P68135 37747912
    780196 8br0:D (2.218) BS01 MN 4.6.1.1 GO:0000774 ... A0A9P1NJI6
    P07737
    37747912
    780197 8br0:D (2.218) BS02 MN 4.6.1.1 GO:0000774 ... A0A9P1NJI6
    P07737
    37747912
    780198 8br0:D (2.218) BS03 CH1 4.6.1.1 GO:0000774 ... A0A9P1NJI6
    P07737
    37747912
    780199 8br1:A (2.044) BS01 LAB 3.6.4.- GO:0000287 ... P68135 37747912
    780200 8br1:A (2.044) BS02 ATP 3.6.4.- GO:0000287 ... P68135 37747912

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).