SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    780201 8br1:B (2.044) BS01 3AT 4.6.1.1 GO:0005576 ... A0A9P1NJI6 37747912
    780202 8br1:B (2.044) BS02 MG 4.6.1.1 GO:0005576 ... A0A9P1NJI6 37747912
    780203 8br1:B (2.044) BS03 MG 4.6.1.1 GO:0005576 ... A0A9P1NJI6 37747912
    780204 8br1:C (2.044) BS01 ATP 3.6.4.- GO:0000287 ... P68135 37747912
    780205 8br1:C (2.044) BS02 LAB 3.6.4.- GO:0000287 ... P68135 37747912
    780206 8br1:D (2.044) BS01 3AT 4.6.1.1 GO:0005576 ... A0A9P1NJI6 37747912
    780207 8br1:D (2.044) BS02 MG 4.6.1.1 GO:0005576 ... A0A9P1NJI6 37747912
    780208 8br1:D (2.044) BS03 MG 4.6.1.1 GO:0005576 ... A0A9P1NJI6 37747912
    780209 8br2:A (2.9) BS01 dna ? GO:0000150 ... Q06609 37216117
    780210 8br2:A (2.9) BS02 CA ? GO:0000150 ... Q06609 37216117
    780211 8br2:A (2.9) BS03 ATP ? GO:0000150 ... Q06609 37216117
    780212 8br2:A (2.9) BS04 CA ? GO:0000150 ... Q06609 37216117
    780213 8br2:A (2.9) BS05 ATP ? GO:0000150 ... Q06609 37216117
    780214 8br2:B (2.9) BS01 dna ? GO:0000150 ... Q06609 37216117
    780215 8br2:B (2.9) BS02 dna ? GO:0000150 ... Q06609 37216117
    780216 8br2:B (2.9) BS03 CA ? GO:0000150 ... Q06609 37216117
    780217 8br2:B (2.9) BS04 ATP ? GO:0000150 ... Q06609 37216117
    780218 8br2:B (2.9) BS05 CA ? GO:0000150 ... Q06609 37216117
    780219 8br2:B (2.9) BS06 ATP ? GO:0000150 ... Q06609 37216117
    780220 8br2:C (2.9) BS01 dna ? GO:0000150 ... Q06609 37216117
    780221 8br2:C (2.9) BS02 dna ? GO:0000150 ... Q06609 37216117
    780222 8br2:C (2.9) BS03 CA ? GO:0000150 ... Q06609 37216117
    780223 8br2:C (2.9) BS04 ATP ? GO:0000150 ... Q06609 37216117
    780224 8br2:C (2.9) BS05 CA ? GO:0000150 ... Q06609 37216117
    780225 8br2:C (2.9) BS06 ATP ? GO:0000150 ... Q06609 37216117
    780226 8br2:D (2.9) BS01 dna ? GO:0000150 ... Q06609 37216117
    780227 8br2:D (2.9) BS02 dna ? GO:0000150 ... Q06609 37216117
    780228 8br2:D (2.9) BS03 CA ? GO:0000150 ... Q06609 37216117
    780229 8br2:D (2.9) BS04 ATP ? GO:0000150 ... Q06609 37216117
    780230 8br2:D (2.9) BS05 CA ? GO:0000150 ... Q06609 37216117
    780231 8br2:D (2.9) BS06 ATP ? GO:0000150 ... Q06609 37216117
    780232 8br2:E (2.9) BS01 dna ? GO:0000150 ... Q06609 37216117
    780233 8br2:E (2.9) BS02 dna ? GO:0000150 ... Q06609 37216117
    780234 8br2:E (2.9) BS03 CA ? GO:0000150 ... Q06609 37216117
    780235 8br2:E (2.9) BS04 ATP ? GO:0000150 ... Q06609 37216117
    780236 8br2:E (2.9) BS05 CA ? GO:0000150 ... Q06609 37216117
    780237 8br2:E (2.9) BS06 ATP ? GO:0000150 ... Q06609 37216117
    780238 8br2:F (2.9) BS01 dna ? GO:0000150 ... Q06609 37216117
    780239 8br2:F (2.9) BS02 dna ? GO:0000150 ... Q06609 37216117
    780240 8br2:F (2.9) BS03 CA ? GO:0000150 ... Q06609 37216117
    780241 8br2:F (2.9) BS04 ATP ? GO:0000150 ... Q06609 37216117
    780242 8br4:A (3.29) BS01 NAD 1.2.1.12 GO:0004365 ... P9WN83 39436721
    780243 8br4:B (3.29) BS01 NAD 1.2.1.12 GO:0004365 ... P9WN83 39436721
    780244 8br4:C (3.29) BS01 NAD 1.2.1.12 GO:0004365 ... P9WN83 39436721
    780245 8br4:D (3.29) BS01 NAD 1.2.1.12 GO:0004365 ... P9WN83 39436721
    780246 8br4:E (3.29) BS01 NAD 1.2.1.12 GO:0004365 ... P9WN83 39436721
    780247 8br4:F (3.29) BS01 NAD 1.2.1.12 GO:0004365 ... P9WN83 39436721
    780248 8br4:G (3.29) BS01 NAD 1.2.1.12 GO:0004365 ... P9WN83 39436721
    780249 8br4:H (3.29) BS01 NAD 1.2.1.12 GO:0004365 ... P9WN83 39436721
    780250 8br4:I (3.29) BS01 NAD 1.2.1.12 GO:0004365 ... P9WN83 39436721
    780251 8br4:J (3.29) BS01 NAD 1.2.1.12 GO:0004365 ... P9WN83 39436721
    780252 8br4:K (3.29) BS01 NAD 1.2.1.12 GO:0004365 ... P9WN83 39436721
    780253 8br4:L (3.29) BS01 NAD 1.2.1.12 GO:0004365 ... P9WN83 39436721
    780254 8br4:M (3.29) BS01 NAD 1.2.1.12 GO:0004365 ... P9WN83 39436721
    780255 8br4:N (3.29) BS01 NAD 1.2.1.12 GO:0004365 ... P9WN83 39436721
    780256 8br4:O (3.29) BS01 NAD 1.2.1.12 GO:0004365 ... P9WN83 39436721
    780257 8br4:P (3.29) BS01 NAD 1.2.1.12 GO:0004365 ... P9WN83 39436721
    780258 8br5:AAA (2.7) BS01 R73 2.7.11.1 GO:0000287 ... Q9NWZ3 38228402
    780259 8br5:BBB (2.7) BS01 R73 2.7.11.1 GO:0000287 ... Q9NWZ3 38228402
    780260 8br5:CCC (2.7) BS01 R73 2.7.11.1 GO:0000287 ... Q9NWZ3 38228402
    780261 8br5:DDD (2.7) BS01 R73 2.7.11.1 GO:0000287 ... Q9NWZ3 38228402
    780262 8br6:AAA (2.167) BS01 R6I 2.7.11.1 GO:0000287 ... Q9NWZ3 38228402
    780263 8br6:BBB (2.167) BS01 R6I 2.7.11.1 GO:0000287 ... Q9NWZ3 38228402
    780264 8br7:AAA (2.119) BS01 R6R 2.7.11.1 GO:0000287 ... Q9NWZ3 38228402
    780265 8br7:BBB (2.119) BS01 R6R 2.7.11.1 GO:0000287 ... Q9NWZ3 38228402
    780266 8br8:LA (3.35) BS01 rna ? GO:0002181 ... E2RTN4 36912103
    780267 8br8:LA (3.35) BS02 rna ? GO:0002181 ... E2RTN4 36912103
    780268 8br8:LB (3.35) BS01 rna ? GO:0003723 ... A8BRZ3 36912103
    780269 8br8:LC (3.35) BS01 rna ? GO:0003723 ... A8B7H8 36912103
    780270 8br8:LC (3.35) BS02 rna ? GO:0003723 ... A8B7H8 36912103
    780271 8br8:LF (3.35) BS01 rna ? GO:0000027 ... E2RU47 36912103
    780272 8br8:LF (3.35) BS02 rna ? GO:0000027 ... E2RU47 36912103
    780273 8br8:LG (3.35) BS01 rna ? GO:0002181 ... A0A644EZB9 36912103
    780274 8br8:LG (3.35) BS02 rna ? GO:0002181 ... A0A644EZB9 36912103
    780275 8br8:LH (3.35) BS01 rna ? GO:0000463 ... A8BRY6 36912103
    780276 8br8:LH (3.35) BS02 rna ? GO:0000463 ... A8BRY6 36912103
    780277 8br8:LI (3.35) BS01 rna ? GO:0000470 ... A8BLL7 36912103
    780278 8br8:LI (3.35) BS02 rna ? GO:0000470 ... A8BLL7 36912103
    780279 8br8:LJ (3.35) BS01 rna ? GO:0002181 ... A8BNT5 36912103
    780280 8br8:LK (3.35) BS01 rna ? GO:0003735 ... A8BM86 36912103
    780281 8br8:LK (3.35) BS02 rna ? GO:0003735 ... A8BM86 36912103
    780282 8br8:LL (3.35) BS01 rna ? GO:0003723 ... A8BI95 36912103
    780283 8br8:LL (3.35) BS02 rna ? GO:0003723 ... A8BI95 36912103
    780284 8br8:LM (3.35) BS01 rna ? GO:0003735 ... N/A 36912103
    780285 8br8:LM (3.35) BS02 rna ? GO:0003735 ... N/A 36912103
    780286 8br8:LN (3.35) BS01 rna ? GO:0003723 ... A8B4F8 36912103
    780287 8br8:LO (3.35) BS01 rna ? GO:0002181 ... A8B8Z6 36912103
    780288 8br8:LO (3.35) BS02 rna ? GO:0002181 ... A8B8Z6 36912103
    780289 8br8:LP (3.35) BS01 rna ? GO:0003729 ... A8BU75 36912103
    780290 8br8:LQ (3.35) BS01 rna ? GO:0002181 ... A8BE76 36912103
    780291 8br8:LQ (3.35) BS02 rna ? GO:0002181 ... A8BE76 36912103
    780292 8br8:LR (3.35) BS01 rna ? GO:0002181 ... A8B4T7 36912103
    780293 8br8:LS (3.35) BS01 rna ? GO:0003723 ... A8BH61 36912103
    780294 8br8:LS (3.35) BS02 rna ? GO:0003723 ... A8BH61 36912103
    780295 8br8:LT (3.35) BS01 rna ? GO:0002181 ... A0A644FBU1 36912103
    780296 8br8:LT (3.35) BS02 rna ? GO:0002181 ... A0A644FBU1 36912103
    780297 8br8:LU (3.35) BS01 rna ? GO:0003735 ... A8B2Q4 36912103
    780298 8br8:LU (3.35) BS02 rna ? GO:0003735 ... A8B2Q4 36912103
    780299 8br8:LV (3.35) BS01 rna ? GO:0002181 ... A0A644FC41 36912103
    780300 8br8:LW (3.35) BS01 rna ? GO:0003735 ... A8BS37 36912103
    780301 8br8:LX (3.35) BS01 rna ? GO:0003735 ... A8B7P2 36912103
    780302 8br8:LY (3.35) BS01 rna ? GO:0003735 ... A8BMP6 36912103
    780303 8br8:LY (3.35) BS02 rna ? GO:0003735 ... A8BMP6 36912103
    780304 8br8:LZ (3.35) BS01 rna ? GO:0002181 ... A8BFT3 36912103
    780305 8br8:LZ (3.35) BS02 rna ? GO:0002181 ... A8BFT3 36912103
    780306 8br8:La (3.35) BS01 rna ? GO:0003735 ... A8B1T3 36912103
    780307 8br8:Lb (3.35) BS01 rna ? GO:0003735 ... A8BZ78 36912103
    780308 8br8:Lc (3.35) BS01 rna ? GO:0002181 ... A8BYY2 36912103
    780309 8br8:Ld (3.35) BS01 rna ? GO:0003723 ... A8B5N7 36912103
    780310 8br8:Le (3.35) BS01 rna ? GO:0002181 ... A8BMP3 36912103
    780311 8br8:Lf (3.35) BS01 rna ? GO:0003735 ... A8BMD9 36912103
    780312 8br8:Lg (3.35) BS01 rna ? GO:0002181 ... A8BKK5 36912103
    780313 8br8:Lh (3.35) BS01 rna ? GO:0003735 ... A8BMF7 36912103
    780314 8br8:Li (3.35) BS01 rna ? GO:0000463 ... A0A644FBK5 36912103
    780315 8br8:Li (3.35) BS02 rna ? GO:0000463 ... A0A644FBK5 36912103
    780316 8br8:Lj (3.35) BS01 rna ? GO:0002181 ... A8BYA6 36912103
    780317 8br8:Lk (3.35) BS01 rna ? GO:0000448 ... A8BLV7 36912103
    780318 8br8:Lk (3.35) BS02 rna ? GO:0000448 ... A8BLV7 36912103
    780319 8br8:Ll (3.35) BS01 rna ? GO:0003735 ... A8B481 36912103
    780320 8br8:Ln (3.35) BS01 rna ? GO:0003723 ... A0A644FB74 36912103
    780321 8br8:Lp (3.35) BS01 rna ? GO:0002181 ... A8BQU8 36912103
    780322 8br8:Lp (3.35) BS02 rna ? GO:0002181 ... A8BQU8 36912103
    780323 8br8:Lq (3.35) BS01 rna ? GO:0003735 ... A8BN26 36912103
    780324 8br8:Lq (3.35) BS02 rna ? GO:0003735 ... A8BN26 36912103
    780325 8br8:Ls (3.35) BS01 rna ? GO:0003729 ... A8BXE1 36912103
    780326 8br8:SA (3.35) BS01 rna ? GO:0000028 ... A8BE86 36912103
    780327 8br8:SB (3.35) BS01 rna ? GO:0003723 ... A8BMZ1 36912103
    780328 8br8:SC (3.35) BS01 rna ? GO:0003723 ... A8B8Z2 36912103
    780329 8br8:SD (3.35) BS01 rna ? GO:0003735 ... A8BS79 36912103
    780330 8br8:SD (3.35) BS02 rna ? GO:0003735 ... A8BS79 36912103
    780331 8br8:SE (3.35) BS01 rna ? GO:0003723 ... A8BFE3 36912103
    780332 8br8:SF (3.35) BS01 rna ? GO:0003729 ... A8BZD3 36912103
    780333 8br8:SG (3.35) BS01 rna ? GO:0003735 ... A8B6L8 36912103
    780334 8br8:SH (3.35) BS01 rna ? GO:0003735 ... A8BT38 36912103
    780335 8br8:SI (3.35) BS01 rna ? GO:0002181 ... A8B252 36912103
    780336 8br8:SI (3.35) BS02 rna ? GO:0002181 ... A8B252 36912103
    780337 8br8:SJ (3.35) BS01 rna ? GO:0003735 ... E2RU77 36912103
    780338 8br8:SK (3.35) BS01 rna ? GO:0003723 ... A8BKS8 36912103
    780339 8br8:SL (3.35) BS01 rna ? GO:0003723 ... A8BRX3 36912103
    780340 8br8:SM (3.35) BS01 rna ? GO:0003735 ... A8BVU0 36912103
    780341 8br8:SO (3.35) BS01 rna ? GO:0003735 ... A8BS96 36912103
    780342 8br8:SP (3.35) BS01 rna ? GO:0000462 ... A8BE02 36912103
    780343 8br8:SP (3.35) BS02 rna ? GO:0000462 ... A8BE02 36912103
    780344 8br8:SQ (3.35) BS01 rna ? GO:0000028 ... E2RU83 36912103
    780345 8br8:SR (3.35) BS01 rna ? GO:0003735 ... A8BBP3 36912103
    780346 8br8:ST (3.35) BS01 rna ? GO:0000462 ... A8BKC6 36912103
    780347 8br8:SU (3.35) BS01 rna ? GO:0003735 ... A8BRG5 36912103
    780348 8br8:SV (3.35) BS01 rna ? GO:0003676 ... A8BZ58 36912103
    780349 8br8:SW (3.35) BS01 rna ? GO:0003735 ... A0A644F964 36912103
    780350 8br8:SX (3.35) BS01 rna ? GO:0003735 ... A8B4G0 36912103
    780351 8br8:Sb (3.35) BS01 rna ? GO:0002181 ... A8B593 36912103
    780352 8br8:Sc (3.35) BS01 rna ? GO:0003735 ... A8B8H7 36912103
    780353 8br8:Sd (3.35) BS01 rna ? GO:0003729 ... A8BQZ7 36912103
    780354 8br8:Se (3.35) BS01 rna ? GO:0003735 ... A0A644F5K9 36912103
    780355 8br8:Sg (3.35) BS01 rna ? GO:0000028 ... A8B4F3 36912103
    780356 8br8:Sh (3.35) BS01 rna ? GO:0002181 ... A0A644FA19 36912103
    780357 8br8:Sj (3.35) BS01 rna ? GO:0003735 ... A0A644F843 36912103
    780358 8br9:A (1.63) BS01 peptide ? GO:0003677 ... O74036 38075664
    780359 8br9:A (1.63) BS02 ADP ? GO:0003677 ... O74036 38075664
    780360 8bra:B (1.7) BS01 UB7 N/A GO:0016788 ... A0AA82WPD4 37019924
    780361 8brb:A (1.7) BS01 UB7 N/A GO:0016788 ... A0AA82WPD4 37019924
    780362 8brb:B (1.7) BS01 UB7 N/A GO:0016788 ... A0AA82WPD4 37019924
    780363 8brc:A (3.17) BS01 FE ? GO:0005506 ... P02787 36602395
    780364 8brd:B (2.48) BS01 NA ? GO:0005515 ... O06873 37500658
    780365 8brd:E (2.48) BS01 NA ? GO:0005515 ... O06873 37500658
    780366 8brd:G (2.48) BS01 NA ? N/A A0A7Y4B4T7 37500658
    780367 8brh:A (2.4) BS01 peptide ? GO:0005737 ... Q6CMY7 39054317
    780368 8brk:A (1.75) BS01 HEC ? N/A Q746G4 37199504
    780369 8brl:D (1.88) BS01 HEC ? GO:0005506 ... F7J213 37199504
    780370 8brm:LA (3.33) BS01 rna ? GO:0002181 ... E2RTN4 36912103
    780371 8brm:LA (3.33) BS02 rna ? GO:0002181 ... E2RTN4 36912103
    780372 8brm:LB (3.33) BS01 rna ? GO:0003723 ... A8BRZ3 36912103
    780373 8brm:LC (3.33) BS01 rna ? GO:0003723 ... A8B7H8 36912103
    780374 8brm:LC (3.33) BS02 rna ? GO:0003723 ... A8B7H8 36912103
    780375 8brm:LF (3.33) BS01 rna ? GO:0000027 ... E2RU47 36912103
    780376 8brm:LF (3.33) BS02 rna ? GO:0000027 ... E2RU47 36912103
    780377 8brm:LG (3.33) BS01 rna ? GO:0002181 ... A0A644EZB9 36912103
    780378 8brm:LG (3.33) BS02 rna ? GO:0002181 ... A0A644EZB9 36912103
    780379 8brm:LH (3.33) BS01 rna ? GO:0000463 ... A8BRY6 36912103
    780380 8brm:LH (3.33) BS02 rna ? GO:0000463 ... A8BRY6 36912103
    780381 8brm:LI (3.33) BS01 rna ? GO:0000470 ... A8BLL7 36912103
    780382 8brm:LI (3.33) BS02 rna ? GO:0000470 ... A8BLL7 36912103
    780383 8brm:LJ (3.33) BS01 rna ? GO:0002181 ... A8BNT5 36912103
    780384 8brm:LK (3.33) BS01 rna ? GO:0003735 ... A8BM86 36912103
    780385 8brm:LK (3.33) BS02 rna ? GO:0003735 ... A8BM86 36912103
    780386 8brm:LL (3.33) BS01 rna ? GO:0003723 ... A8BI95 36912103
    780387 8brm:LL (3.33) BS02 rna ? GO:0003723 ... A8BI95 36912103
    780388 8brm:LM (3.33) BS01 rna ? GO:0003735 ... N/A 36912103
    780389 8brm:LM (3.33) BS02 rna ? GO:0003735 ... N/A 36912103
    780390 8brm:LN (3.33) BS01 rna ? GO:0003723 ... A8B4F8 36912103
    780391 8brm:LO (3.33) BS01 rna ? GO:0002181 ... A8B8Z6 36912103
    780392 8brm:LO (3.33) BS02 rna ? GO:0002181 ... A8B8Z6 36912103
    780393 8brm:LP (3.33) BS01 rna ? GO:0003729 ... A8BU75 36912103
    780394 8brm:LQ (3.33) BS01 rna ? GO:0002181 ... A8BE76 36912103
    780395 8brm:LQ (3.33) BS02 rna ? GO:0002181 ... A8BE76 36912103
    780396 8brm:LR (3.33) BS01 rna ? GO:0002181 ... A8B4T7 36912103
    780397 8brm:LS (3.33) BS01 rna ? GO:0003723 ... A8BH61 36912103
    780398 8brm:LS (3.33) BS02 rna ? GO:0003723 ... A8BH61 36912103
    780399 8brm:LT (3.33) BS01 rna ? GO:0002181 ... A0A644FBU1 36912103
    780400 8brm:LT (3.33) BS02 rna ? GO:0002181 ... A0A644FBU1 36912103

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).