SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 3893 3894 3895 3896 3897 3898 3899 3900 3901 3902 3903 3904 3905 3906 3907 3908 3909 3910 3911 3912 3913 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    780401 8brm:LU (3.33) BS01 rna ? GO:0003735 ... A8B2Q4 36912103
    780402 8brm:LU (3.33) BS02 rna ? GO:0003735 ... A8B2Q4 36912103
    780403 8brm:LV (3.33) BS01 rna ? GO:0002181 ... A0A644FC41 36912103
    780404 8brm:LW (3.33) BS01 rna ? GO:0003735 ... A8BS37 36912103
    780405 8brm:LX (3.33) BS01 rna ? GO:0003735 ... A8B7P2 36912103
    780406 8brm:LY (3.33) BS01 rna ? GO:0003735 ... A8BMP6 36912103
    780407 8brm:LY (3.33) BS02 rna ? GO:0003735 ... A8BMP6 36912103
    780408 8brm:LZ (3.33) BS01 rna ? GO:0002181 ... A8BFT3 36912103
    780409 8brm:LZ (3.33) BS02 rna ? GO:0002181 ... A8BFT3 36912103
    780410 8brm:La (3.33) BS01 rna ? GO:0003735 ... A8B1T3 36912103
    780411 8brm:Lb (3.33) BS01 rna ? GO:0003735 ... A8BZ78 36912103
    780412 8brm:Lc (3.33) BS01 rna ? GO:0002181 ... A8BYY2 36912103
    780413 8brm:Ld (3.33) BS01 rna ? GO:0003723 ... A8B5N7 36912103
    780414 8brm:Le (3.33) BS01 rna ? GO:0002181 ... A8BMP3 36912103
    780415 8brm:Lf (3.33) BS01 rna ? GO:0003735 ... A8BMD9 36912103
    780416 8brm:Lg (3.33) BS01 rna ? GO:0002181 ... A8BKK5 36912103
    780417 8brm:Lh (3.33) BS01 rna ? GO:0003735 ... A8BMF7 36912103
    780418 8brm:Li (3.33) BS01 rna ? GO:0000463 ... A0A644FBK5 36912103
    780419 8brm:Li (3.33) BS02 rna ? GO:0000463 ... A0A644FBK5 36912103
    780420 8brm:Lj (3.33) BS01 rna ? GO:0002181 ... A8BYA6 36912103
    780421 8brm:Lk (3.33) BS01 rna ? GO:0000448 ... A8BLV7 36912103
    780422 8brm:Lk (3.33) BS02 rna ? GO:0000448 ... A8BLV7 36912103
    780423 8brm:Ll (3.33) BS01 rna ? GO:0003735 ... A8B481 36912103
    780424 8brm:Ln (3.33) BS01 rna ? GO:0003723 ... A0A644FB74 36912103
    780425 8brm:Lp (3.33) BS01 rna ? GO:0002181 ... A8BQU8 36912103
    780426 8brm:Lq (3.33) BS01 rna ? GO:0003735 ... A8BN26 36912103
    780427 8brm:Ls (3.33) BS01 rna ? GO:0003729 ... A8BXE1 36912103
    780428 8brm:SA (3.33) BS01 rna ? GO:0000028 ... A8BE86 36912103
    780429 8brm:SB (3.33) BS01 rna ? GO:0003723 ... A8BMZ1 36912103
    780430 8brm:SC (3.33) BS01 rna ? GO:0003723 ... A8B8Z2 36912103
    780431 8brm:SD (3.33) BS01 rna ? GO:0003735 ... A8BS79 36912103
    780432 8brm:SE (3.33) BS01 rna ? GO:0003723 ... A8BFE3 36912103
    780433 8brm:SF (3.33) BS01 rna ? GO:0003729 ... A8BZD3 36912103
    780434 8brm:SG (3.33) BS01 rna ? GO:0003735 ... A8B6L8 36912103
    780435 8brm:SH (3.33) BS01 rna ? GO:0003735 ... A8BT38 36912103
    780436 8brm:SI (3.33) BS01 rna ? GO:0002181 ... A8B252 36912103
    780437 8brm:SI (3.33) BS02 rna ? GO:0002181 ... A8B252 36912103
    780438 8brm:SJ (3.33) BS01 rna ? GO:0003735 ... E2RU77 36912103
    780439 8brm:SK (3.33) BS01 rna ? GO:0003723 ... A8BKS8 36912103
    780440 8brm:SL (3.33) BS01 rna ? GO:0003723 ... A8BRX3 36912103
    780441 8brm:SM (3.33) BS01 rna ? GO:0003735 ... A8BVU0 36912103
    780442 8brm:SO (3.33) BS01 rna ? GO:0003735 ... A8BS96 36912103
    780443 8brm:SP (3.33) BS01 rna ? GO:0000462 ... A8BE02 36912103
    780444 8brm:SQ (3.33) BS01 rna ? GO:0000028 ... E2RU83 36912103
    780445 8brm:SR (3.33) BS01 rna ? GO:0003735 ... A8BBP3 36912103
    780446 8brm:ST (3.33) BS01 rna ? GO:0000462 ... A8BKC6 36912103
    780447 8brm:SU (3.33) BS01 rna ? GO:0003735 ... A8BRG5 36912103
    780448 8brm:SV (3.33) BS01 rna ? GO:0003676 ... A8BZ58 36912103
    780449 8brm:SV (3.33) BS02 rna ? GO:0003676 ... A8BZ58 36912103
    780450 8brm:SW (3.33) BS01 rna ? GO:0003735 ... A0A644F964 36912103
    780451 8brm:SX (3.33) BS01 rna ? GO:0003735 ... A8B4G0 36912103
    780452 8brm:Sb (3.33) BS01 rna ? GO:0002181 ... A8B593 36912103
    780453 8brm:Sc (3.33) BS01 rna ? GO:0003735 ... A8B8H7 36912103
    780454 8brm:Sd (3.33) BS01 rna ? GO:0003729 ... A8BQZ7 36912103
    780455 8brm:Se (3.33) BS01 rna ? GO:0003735 ... A0A644F5K9 36912103
    780456 8brm:Sg (3.33) BS01 rna ? GO:0000028 ... A8B4F3 36912103
    780457 8brm:Sh (3.33) BS01 rna ? GO:0002181 ... A0A644FA19 36912103
    780458 8brm:Sj (3.33) BS01 rna ? GO:0003735 ... A0A644F843 36912103
    780459 8brn:A (2.0) BS01 ZN 3.1.3.2 GO:0003993 ... P80366 37087894
    780460 8brn:A (2.0) BS02 FE 3.1.3.2 GO:0003993 ... P80366 37087894
    780461 8brn:A (2.0) BS03 R9X 3.1.3.2 GO:0003993 ... P80366 37087894
    780462 8brn:A (2.0) BS04 R9X 3.1.3.2 GO:0003993 ... P80366 37087894
    780463 8brn:B (2.0) BS01 ZN 3.1.3.2 GO:0003993 ... P80366 37087894
    780464 8brn:B (2.0) BS02 FE 3.1.3.2 GO:0003993 ... P80366 37087894
    780465 8brn:B (2.0) BS03 R9X 3.1.3.2 GO:0003993 ... P80366 37087894
    780466 8brn:C (2.0) BS01 ZN 3.1.3.2 GO:0003993 ... P80366 37087894
    780467 8brn:C (2.0) BS02 FE 3.1.3.2 GO:0003993 ... P80366 37087894
    780468 8brn:C (2.0) BS03 R9X 3.1.3.2 GO:0003993 ... P80366 37087894
    780469 8brn:C (2.0) BS04 R9X 3.1.3.2 GO:0003993 ... P80366 37087894
    780470 8brn:D (2.0) BS01 ZN 3.1.3.2 GO:0003993 ... P80366 37087894
    780471 8brn:D (2.0) BS02 FE 3.1.3.2 GO:0003993 ... P80366 37087894
    780472 8brn:D (2.0) BS03 R9X 3.1.3.2 GO:0003993 ... P80366 37087894
    780473 8bro:A (1.55) BS01 R7E ? N/A B4EH86 36771163
    780474 8brp:A (2.6) BS01 MN ? N/A A0ACD6B9I1 36791048
    780475 8brp:A (2.6) BS02 MN ? N/A A0ACD6B9I1 36791048
    780476 8brp:B (2.6) BS01 MN ? N/A A0ACD6B9I1 36791048
    780477 8brp:B (2.6) BS02 MN ? N/A A0ACD6B9I1 36791048
    780478 8brp:C (2.6) BS01 MN ? N/A A0ACD6B9I1 36791048
    780479 8brp:C (2.6) BS02 MN ? N/A A0ACD6B9I1 36791048
    780480 8brp:D (2.6) BS01 MN ? N/A A0ACD6B9I1 36791048
    780481 8brp:D (2.6) BS02 MN ? N/A A0ACD6B9I1 36791048
    780482 8brq:B (1.63) BS01 BU3 ? GO:0016787 ... A0ACD6B9X2 N/A
    780483 8brq:B (1.63) BS02 BU3 ? GO:0016787 ... A0ACD6B9X2 N/A
    780484 8brq:B (1.63) BS03 CA ? GO:0016787 ... A0ACD6B9X2 N/A
    780485 8brq:B (1.63) BS04 CA ? GO:0016787 ... A0ACD6B9X2 N/A
    780486 8brr:B (1.95) BS01 BU3 ? GO:0016787 ... A0ACD6B9X2 N/A
    780487 8brr:B (1.95) BS02 CA ? GO:0016787 ... A0ACD6B9X2 N/A
    780488 8brr:B (1.95) BS03 CA ? GO:0016787 ... A0ACD6B9X2 N/A
    780489 8brr:D (1.95) BS01 BU3 ? GO:0016787 ... A0ACD6B9X2 N/A
    780490 8brr:D (1.95) BS02 CA ? GO:0016787 ... A0ACD6B9X2 N/A
    780491 8brr:D (1.95) BS03 CA ? GO:0016787 ... A0ACD6B9X2 N/A
    780492 8brs:B (1.2) BS01 BU3 ? GO:0016787 ... A0ACD6B9X2 N/A
    780493 8brs:B (1.2) BS02 BU3 ? GO:0016787 ... A0ACD6B9X2 N/A
    780494 8brs:B (1.2) BS03 BU3 ? GO:0016787 ... A0ACD6B9X2 N/A
    780495 8brs:B (1.2) BS04 CA ? GO:0016787 ... A0ACD6B9X2 N/A
    780496 8brs:B (1.2) BS05 CA ? GO:0016787 ... A0ACD6B9X2 N/A
    780497 8brt:B (1.31) BS01 BU3 ? GO:0016787 ... A0ACD6B9X2 N/A
    780498 8brt:B (1.31) BS02 BU3 ? GO:0016787 ... A0ACD6B9X2 N/A
    780499 8brt:B (1.31) BS03 CA ? GO:0016787 ... A0ACD6B9X2 N/A
    780500 8brt:B (1.31) BS04 CA ? GO:0016787 ... A0ACD6B9X2 N/A
    780501 8bru:A (1.55) BS01 ZN 6.1.1.10 GO:0000166 ... P00959 37518893
    780502 8brv:A (1.53) BS01 ZN 6.1.1.10 GO:0000166 ... P00959 37518893
    780503 8brv:A (1.53) BS02 B3M 6.1.1.10 GO:0000166 ... P00959 37518893
    780504 8brw:A (1.73) BS01 ZN 6.1.1.10 GO:0000166 ... P00959 37518893
    780505 8brx:A (1.54) BS01 ZN 6.1.1.10 GO:0000166 ... P00959 37518893
    780506 8brx:A (1.54) BS02 B3M 6.1.1.10 GO:0000166 ... P00959 37518893
    780507 8bs3:A (2.2) BS01 ZN 2.3.2.-
    3.4.19.12
    GO:0004843 ... Q9P275 37443395
    780508 8bs3:A (2.2) BS02 ZN 2.3.2.-
    3.4.19.12
    GO:0004843 ... Q9P275 37443395
    780509 8bs3:A (2.2) BS03 AYE 2.3.2.-
    3.4.19.12
    GO:0004843 ... Q9P275 37443395
    780510 8bs9:A (1.9) BS01 ZN 2.3.2.-
    3.4.19.12
    GO:0004843 ... Q9P275 37443395
    780511 8bs9:A (1.9) BS02 ZN 2.3.2.-
    3.4.19.12
    GO:0004843 ... Q9P275 37443395
    780512 8bs9:A (1.9) BS03 AYE 2.3.2.-
    3.4.19.12
    GO:0004843 ... Q9P275 37443395
    780513 8bs9:C (1.9) BS01 ZN 2.3.2.-
    3.4.19.12
    GO:0004843 ... Q9P275 37443395
    780514 8bs9:C (1.9) BS02 ZN 2.3.2.-
    3.4.19.12
    GO:0004843 ... Q9P275 37443395
    780515 8bs9:C (1.9) BS03 AYE 2.3.2.-
    3.4.19.12
    GO:0004843 ... Q9P275 37443395
    780516 8bsa:A (1.9) BS01 DAR ? N/A Q9KSE4 37365341
    780517 8bsa:B (1.9) BS01 DAR ? N/A Q9KSE4 37365341
    780518 8bsb:A (1.9) BS01 DLY ? N/A Q9KSE4 37365341
    780519 8bsb:B (1.9) BS01 DLY ? N/A Q9KSE4 37365341
    780520 8bsc:A (3.6) BS01 CA ? GO:0000150 ... Q06609 37216117
    780521 8bsc:A (3.6) BS02 ADP ? GO:0000150 ... Q06609 37216117
    780522 8bsc:B (3.6) BS01 CA ? GO:0000150 ... Q06609 37216117
    780523 8bsc:B (3.6) BS02 ADP ? GO:0000150 ... Q06609 37216117
    780524 8bsc:C (3.6) BS01 CA ? GO:0000150 ... Q06609 37216117
    780525 8bsc:C (3.6) BS02 ADP ? GO:0000150 ... Q06609 37216117
    780526 8bsc:D (3.6) BS01 CA ? GO:0000150 ... Q06609 37216117
    780527 8bsc:D (3.6) BS02 ADP ? GO:0000150 ... Q06609 37216117
    780528 8bsc:E (3.6) BS01 CA ? GO:0000150 ... Q06609 37216117
    780529 8bsc:E (3.6) BS02 ADP ? GO:0000150 ... Q06609 37216117
    780530 8bsc:F (3.6) BS01 CA ? GO:0000150 ... Q06609 37216117
    780531 8bsc:F (3.6) BS02 ADP ? GO:0000150 ... Q06609 37216117
    780532 8bsc:G (3.6) BS01 CA ? GO:0000150 ... Q06609 37216117
    780533 8bsc:G (3.6) BS02 ADP ? GO:0000150 ... Q06609 37216117
    780534 8bsd:A (1.95) BS01 TBN 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0004483 ... P0DTD1 N/A
    780535 8bsd:B (1.95) BS01 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0003723 ... P0DTD1 N/A
    780536 8bsd:B (1.95) BS02 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0003723 ... P0DTD1 N/A
    780537 8bsg:A (1.89) BS01 DIF ? GO:0003677 ... P49065 36675044
    780538 8bsg:A (1.89) BS02 DIF ? GO:0003677 ... P49065 36675044
    780539 8bsg:A (1.89) BS03 POG ? GO:0003677 ... P49065 36675044
    780540 8bsg:A (1.89) BS04 POG ? GO:0003677 ... P49065 36675044
    780541 8bsh:B (3.8) BS01 MG 3.6.5.- GO:0000139 ... P20606 36468689
    780542 8bsh:B (3.8) BS02 GNP 3.6.5.- GO:0000139 ... P20606 36468689
    780543 8bsi:LA (3.4) BS01 rna ? GO:0002181 ... E2RTN4 36912103
    780544 8bsi:LB (3.4) BS01 rna ? GO:0003723 ... A8BRZ3 36912103
    780545 8bsi:LC (3.4) BS01 rna ? GO:0003723 ... A8B7H8 36912103
    780546 8bsi:LC (3.4) BS02 rna ? GO:0003723 ... A8B7H8 36912103
    780547 8bsi:LF (3.4) BS01 rna ? GO:0000027 ... E2RU47 36912103
    780548 8bsi:LF (3.4) BS02 rna ? GO:0000027 ... E2RU47 36912103
    780549 8bsi:LG (3.4) BS01 rna ? GO:0002181 ... A0A644EZB9 36912103
    780550 8bsi:LG (3.4) BS02 rna ? GO:0002181 ... A0A644EZB9 36912103
    780551 8bsi:LH (3.4) BS01 rna ? GO:0000463 ... A8BRY6 36912103
    780552 8bsi:LH (3.4) BS02 rna ? GO:0000463 ... A8BRY6 36912103
    780553 8bsi:LI (3.4) BS01 rna ? GO:0000470 ... A8BLL7 36912103
    780554 8bsi:LI (3.4) BS02 rna ? GO:0000470 ... A8BLL7 36912103
    780555 8bsi:LJ (3.4) BS01 rna ? GO:0002181 ... A8BNT5 36912103
    780556 8bsi:LK (3.4) BS01 rna ? GO:0003735 ... A8BM86 36912103
    780557 8bsi:LK (3.4) BS02 rna ? GO:0003735 ... A8BM86 36912103
    780558 8bsi:LL (3.4) BS01 rna ? GO:0003723 ... A8BI95 36912103
    780559 8bsi:LL (3.4) BS02 rna ? GO:0003723 ... A8BI95 36912103
    780560 8bsi:LM (3.4) BS01 rna ? GO:0003735 ... N/A 36912103
    780561 8bsi:LM (3.4) BS02 rna ? GO:0003735 ... N/A 36912103
    780562 8bsi:LN (3.4) BS01 rna ? GO:0003723 ... A8B4F8 36912103
    780563 8bsi:LO (3.4) BS01 rna ? GO:0002181 ... A8B8Z6 36912103
    780564 8bsi:LO (3.4) BS02 rna ? GO:0002181 ... A8B8Z6 36912103
    780565 8bsi:LP (3.4) BS01 rna ? GO:0003729 ... A8BU75 36912103
    780566 8bsi:LQ (3.4) BS01 rna ? GO:0002181 ... A8BE76 36912103
    780567 8bsi:LQ (3.4) BS02 rna ? GO:0002181 ... A8BE76 36912103
    780568 8bsi:LR (3.4) BS01 rna ? GO:0002181 ... A8B4T7 36912103
    780569 8bsi:LS (3.4) BS01 rna ? GO:0003723 ... A8BH61 36912103
    780570 8bsi:LS (3.4) BS02 rna ? GO:0003723 ... A8BH61 36912103
    780571 8bsi:LT (3.4) BS01 rna ? GO:0002181 ... A0A644FBU1 36912103
    780572 8bsi:LT (3.4) BS02 rna ? GO:0002181 ... A0A644FBU1 36912103
    780573 8bsi:LU (3.4) BS01 rna ? GO:0003735 ... A8B2Q4 36912103
    780574 8bsi:LU (3.4) BS02 rna ? GO:0003735 ... A8B2Q4 36912103
    780575 8bsi:LV (3.4) BS01 rna ? GO:0002181 ... A0A644FC41 36912103
    780576 8bsi:LW (3.4) BS01 rna ? GO:0003735 ... A8BS37 36912103
    780577 8bsi:LX (3.4) BS01 rna ? GO:0003735 ... A8B7P2 36912103
    780578 8bsi:LY (3.4) BS01 rna ? GO:0003735 ... A8BMP6 36912103
    780579 8bsi:LY (3.4) BS02 rna ? GO:0003735 ... A8BMP6 36912103
    780580 8bsi:LZ (3.4) BS01 rna ? GO:0002181 ... A8BFT3 36912103
    780581 8bsi:LZ (3.4) BS02 rna ? GO:0002181 ... A8BFT3 36912103
    780582 8bsi:La (3.4) BS01 rna ? GO:0003735 ... A8B1T3 36912103
    780583 8bsi:Lb (3.4) BS01 rna ? GO:0003735 ... A8BZ78 36912103
    780584 8bsi:Lc (3.4) BS01 rna ? GO:0002181 ... A8BYY2 36912103
    780585 8bsi:Ld (3.4) BS01 rna ? GO:0003723 ... A8B5N7 36912103
    780586 8bsi:Le (3.4) BS01 rna ? GO:0002181 ... A8BMP3 36912103
    780587 8bsi:Lf (3.4) BS01 rna ? GO:0003735 ... A8BMD9 36912103
    780588 8bsi:Lg (3.4) BS01 rna ? GO:0002181 ... A8BKK5 36912103
    780589 8bsi:Lh (3.4) BS01 rna ? GO:0003735 ... A8BMF7 36912103
    780590 8bsi:Li (3.4) BS01 rna ? GO:0000463 ... A0A644FBK5 36912103
    780591 8bsi:Li (3.4) BS02 rna ? GO:0000463 ... A0A644FBK5 36912103
    780592 8bsi:Lj (3.4) BS01 rna ? GO:0002181 ... A8BYA6 36912103
    780593 8bsi:Lk (3.4) BS01 rna ? GO:0000448 ... A8BLV7 36912103
    780594 8bsi:Lk (3.4) BS02 rna ? GO:0000448 ... A8BLV7 36912103
    780595 8bsi:Ll (3.4) BS01 rna ? GO:0003735 ... A8B481 36912103
    780596 8bsi:Ln (3.4) BS01 rna ? GO:0003723 ... A0A644FB74 36912103
    780597 8bsi:Lp (3.4) BS01 rna ? GO:0002181 ... A8BQU8 36912103
    780598 8bsi:Lp (3.4) BS02 rna ? GO:0002181 ... A8BQU8 36912103
    780599 8bsi:Lq (3.4) BS01 rna ? GO:0003735 ... A8BN26 36912103
    780600 8bsi:Lq (3.4) BS02 rna ? GO:0003735 ... A8BN26 36912103

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).