SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    781401 8but:E (3.25) BS01 RQ5 2.7.11.22
    2.7.11.23
    GO:0004672 ... Q9NYV4 37679459
    781402 8but:G (3.25) BS01 RQ5 ? GO:0003676 ... Q16531 37679459
    781403 8but:H (3.25) BS01 RQ5 2.7.11.22
    2.7.11.23
    GO:0004672 ... Q9NYV4 37679459
    781404 8buu:0 (2.9) BS01 rna ? GO:0003735 ... O34687 36951104
    781405 8buu:0 (2.9) BS02 ZN ? GO:0003735 ... O34687 36951104
    781406 8buu:1 (2.9) BS01 rna ? GO:0003735 ... P56849 36951104
    781407 8buu:1 (2.9) BS02 ZN ? GO:0003735 ... P56849 36951104
    781408 8buu:2 (2.9) BS01 rna ? GO:0003735 ... P05647 36951104
    781409 8buu:3 (2.9) BS01 rna ? GO:0003735 ... P55874 36951104
    781410 8buu:4 (2.9) BS01 rna ? GO:0003735 ... P20278 36951104
    781411 8buu:4 (2.9) BS02 ZN ? GO:0003735 ... P20278 36951104
    781412 8buu:9 (2.9) BS01 rna ? GO:0005524 ... N/A 36951104
    781413 8buu:9 (2.9) BS02 rna ? GO:0005524 ... N/A 36951104
    781414 8buu:9 (2.9) BS03 rna ? GO:0005524 ... N/A 36951104
    781415 8buu:9 (2.9) BS04 ATP ? GO:0005524 ... N/A 36951104
    781416 8buu:9 (2.9) BS05 ATP ? GO:0005524 ... N/A 36951104
    781417 8buu:9 (2.9) BS06 MG ? GO:0005524 ... N/A 36951104
    781418 8buu:9 (2.9) BS07 MG ? GO:0005524 ... N/A 36951104
    781419 8buu:C (2.9) BS01 rna ? GO:0002181 ... P42919 36951104
    781420 8buu:D (2.9) BS01 rna ? GO:0003735 ... P42920 36951104
    781421 8buu:E (2.9) BS01 rna ? GO:0003735 ... P42921 36951104
    781422 8buu:F (2.9) BS01 rna ? GO:0000049 ... P12877 36951104
    781423 8buu:F (2.9) BS02 rna ? GO:0000049 ... P12877 36951104
    781424 8buu:F (2.9) BS03 rna ? GO:0000049 ... P12877 36951104
    781425 8buu:G (2.9) BS01 rna ? GO:0002181 ... P46898 36951104
    781426 8buu:J (2.9) BS01 rna ? GO:0003729 ... P70974 36951104
    781427 8buu:K (2.9) BS01 rna ? GO:0003735 ... P12875 36951104
    781428 8buu:K (2.9) BS02 rna ? GO:0003735 ... P12875 36951104
    781429 8buu:L (2.9) BS01 rna ? GO:0003735 ... P19946 36951104
    781430 8buu:M (2.9) BS01 rna ? GO:0003735 ... P14577 36951104
    781431 8buu:M (2.9) BS02 rna ? GO:0003735 ... P14577 36951104
    781432 8buu:N (2.9) BS01 rna ? GO:0003735 ... P20277 36951104
    781433 8buu:O (2.9) BS01 rna ? GO:0003735 ... P46899 36951104
    781434 8buu:O (2.9) BS02 rna ? GO:0003735 ... P46899 36951104
    781435 8buu:P (2.9) BS01 rna ? GO:0003735 ... O31742 36951104
    781436 8buu:P (2.9) BS02 rna ? GO:0003735 ... O31742 36951104
    781437 8buu:Q (2.9) BS01 rna ? GO:0000027 ... P55873 36951104
    781438 8buu:R (2.9) BS01 rna ? GO:0003723 ... P26908 36951104
    781439 8buu:S (2.9) BS01 rna ? GO:0003735 ... P42060 36951104
    781440 8buu:T (2.9) BS01 rna ? GO:0003735 ... P42924 36951104
    781441 8buu:U (2.9) BS01 rna ? GO:0003723 ... P0CI78 36951104
    781442 8buu:W (2.9) BS01 rna ? GO:0003735 ... P05657 36951104
    781443 8buu:W (2.9) BS02 rna ? GO:0003735 ... P05657 36951104
    781444 8buu:X (2.9) BS01 rna ? GO:0003735 ... P37807 36951104
    781445 8buu:Y (2.9) BS01 rna ? GO:0003735 ... P12873 36951104
    781446 8buu:Z (2.9) BS01 rna ? GO:0003735 ... P19947 36951104
    781447 8buu:Z (2.9) BS02 rna ? GO:0003735 ... P19947 36951104
    781448 8buu:b (2.9) BS01 rna ? GO:0003735 ... P21464 36951104
    781449 8buu:c (2.9) BS01 rna ? GO:0003676 ... P21465 36951104
    781450 8buu:d (2.9) BS01 rna ? GO:0003723 ... P21466 36951104
    781451 8buu:e (2.9) BS01 rna ? GO:0003723 ... P21467 36951104
    781452 8buu:f (2.9) BS01 rna ? GO:0003735 ... P21468 36951104
    781453 8buu:g (2.9) BS01 rna ? GO:0000049 ... P21469 36951104
    781454 8buu:h (2.9) BS01 rna ? GO:0003735 ... P12879 36951104
    781455 8buu:i (2.9) BS01 rna ? GO:0003723 ... P21470 36951104
    781456 8buu:i (2.9) BS02 rna ? GO:0003723 ... P21470 36951104
    781457 8buu:j (2.9) BS01 rna ? GO:0000049 ... P21471 36951104
    781458 8buu:k (2.9) BS01 rna ? GO:0003735 ... P04969 36951104
    781459 8buu:l (2.9) BS01 rna ? GO:0000049 ... P21472 36951104
    781460 8buu:m (2.9) BS01 rna ? GO:0000049 ... P20282 36951104
    781461 8buu:n (2.9) BS01 rna ? GO:0003735 ... P12878 36951104
    781462 8buu:n (2.9) BS02 ZN ? GO:0003735 ... P12878 36951104
    781463 8buu:o (2.9) BS01 rna ? GO:0003735 ... P21473 36951104
    781464 8buu:o (2.9) BS02 rna ? GO:0003735 ... P21473 36951104
    781465 8buu:p (2.9) BS01 rna ? GO:0003735 ... P21474 36951104
    781466 8buu:q (2.9) BS01 rna ? GO:0003735 ... P12874 36951104
    781467 8buu:r (2.9) BS01 rna ? GO:0003735 ... P21475 36951104
    781468 8buu:s (2.9) BS01 rna ? GO:0003723 ... P21476 36951104
    781469 8buu:t (2.9) BS01 rna ? GO:0003723 ... P21477 36951104
    781470 8buv:A (2.04) BS01 723 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P12497 N/A
    781471 8buv:B (2.04) BS01 MG 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P12497 N/A
    781472 8buv:B (2.04) BS02 723 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P12497 N/A
    781473 8buv:B (2.04) BS03 723 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P12497 N/A
    781474 8buv:C (2.04) BS01 723 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P12497 N/A
    781475 8buv:D (2.04) BS01 723 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P12497 N/A
    781476 8buv:D (2.04) BS02 MG 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P12497 N/A
    781477 8buv:D (2.04) BS03 723 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P12497 N/A
    781478 8buw:A (2.85) BS01 peptide ? N/A A0ACD6BAH4 N/A
    781479 8buw:B (2.85) BS01 peptide ? N/A A0ACD6BAH4 N/A
    781480 8bux:A (1.86) BS01 MG ? N/A O15063 37875118
    781481 8buz:A (3.5) BS01 FOK 4.6.1.1 GO:0004016 ... E1BQ12 38351373
    781482 8buz:B (3.5) BS01 GSP ? GO:0003924 ... P04896 38351373
    781483 8buz:B (3.5) BS02 MG ? GO:0003924 ... P04896 38351373
    781484 8bv0:A (4.5) BS01 ADP ? GO:0006952 ... A1X877 37134163
    781485 8bv0:C (4.5) BS01 ADP ? GO:0006952 ... A1X877 37134163
    781486 8bv1:A (2.834) BS01 peptide ? GO:0005634 ... Q9Y294 37347155
    781487 8bv1:A (2.834) BS02 peptide ? GO:0005634 ... Q9Y294 37347155
    781488 8bv1:A (2.834) BS03 peptide ? GO:0005634 ... Q9Y294 37347155
    781489 8bv1:B (2.834) BS01 peptide ? GO:0005634 ... Q9Y294 37347155
    781490 8bv1:B (2.834) BS02 peptide ? GO:0005634 ... Q9Y294 37347155
    781491 8bv1:B (2.834) BS03 peptide ? GO:0005634 ... Q9Y294 37347155
    781492 8bv1:C (2.834) BS01 peptide ? GO:0005634 ... Q9Y294 37347155
    781493 8bv1:D (2.834) BS01 peptide ? GO:0005634 ... Q9Y294 37347155
    781494 8bv1:D (2.834) BS02 peptide ? GO:0005634 ... Q9Y294 37347155
    781495 8bv1:E (2.834) BS01 peptide ? GO:0005634 ... Q9Y294 37347155
    781496 8bv1:E (2.834) BS02 peptide ? GO:0005634 ... Q9Y294 37347155
    781497 8bv1:F (2.834) BS01 peptide ? GO:0005634 ... Q9Y294 37347155
    781498 8bv1:F (2.834) BS02 peptide ? GO:0005634 ... Q9Y294 37347155
    781499 8bv2:A (2.0) BS01 RWR 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P12497 37310224
    781500 8bv2:A (2.0) BS02 MG 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P12497 37310224
    781501 8bv3:A (2.38) BS01 ANP ? GO:0003677 ... P05648 38097584
    781502 8bv3:B (2.38) BS01 ANP ? GO:0003677 ... P05648 38097584
    781503 8bv3:C (2.38) BS01 ANP ? GO:0003677 ... P05648 38097584
    781504 8bv3:C (2.38) BS02 ANP ? GO:0003677 ... P05648 38097584
    781505 8bv3:D (2.38) BS01 ANP ? GO:0003677 ... P05648 38097584
    781506 8bv3:E (2.38) BS01 ANP ? GO:0003677 ... P05648 38097584
    781507 8bv3:E (2.38) BS02 ANP ? GO:0003677 ... P05648 38097584
    781508 8bv3:E (2.38) BS03 MG ? GO:0003677 ... P05648 38097584
    781509 8bv4:A (1.95) BS01 4D6 3.5.2.6 GO:0005576 ... P9WKD3 37335937
    781510 8bv5:A (3.54) BS01 FOK 4.6.1.1 GO:0004016 ... E1BQ12 38351373
    781511 8bv5:B (3.54) BS01 GSP ? GO:0003924 ... P04896 38351373
    781512 8bv5:B (3.54) BS02 MG ? GO:0003924 ... P04896 38351373
    781513 8bv7:A (1.8) BS01 peptide ? N/A A0ACD6BAH4 N/A
    781514 8bva:A (2.19) BS01 peptide ? GO:0008168 ... Q3UKX1 N/A
    781515 8bva:A (2.19) BS02 QVR ? GO:0008168 ... Q3UKX1 N/A
    781516 8bvd:A (2.995) BS01 RLO ? GO:0007155 ... P08191 36839848
    781517 8bvd:B (2.995) BS01 RLO ? GO:0007155 ... P08191 36839848
    781518 8bvd:C (2.995) BS01 RLO ? GO:0007155 ... P08191 36839848
    781519 8bvd:D (2.995) BS01 RLO ? GO:0007155 ... P08191 36839848
    781520 8bvf:A (2.68) BS01 peptide 2.10.1.1 GO:0005737 ... Q8NS03 37679597
    781521 8bvf:B (2.68) BS01 peptide 2.10.1.1 GO:0005737 ... Q8NS03 37679597
    781522 8bvh:B (3.6) BS01 rna 3.1.11.2 GO:0003824 ... G3XDB0 36504222
    781523 8bvh:D (3.6) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    781524 8bvh:E (3.6) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    781525 8bvh:F (3.6) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    781526 8bvh:G (3.6) BS01 rna 3.1.11.2 GO:0003824 ... G3XDB0 36504222
    781527 8bvh:H (3.6) BS01 rna 3.1.11.2 GO:0003824 ... G3XDB0 36504222
    781528 8bvh:I (3.6) BS01 rna 3.1.11.2 GO:0003824 ... G3XDB0 36504222
    781529 8bvh:J (3.6) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    781530 8bvh:K (3.6) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    781531 8bvh:L (3.6) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    781532 8bvh:M (3.6) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    781533 8bvh:N (3.6) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    781534 8bvh:O (3.6) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    781535 8bvh:P (3.6) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    781536 8bvh:Q (3.6) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    781537 8bvh:R (3.6) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    781538 8bvh:S (3.6) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    781539 8bvh:T (3.6) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    781540 8bvh:U (3.6) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    781541 8bvh:w (3.6) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    781542 8bvh:x (3.6) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    781543 8bvj:A (4.5) BS01 rna 3.1.11.2 GO:0003824 ... Q51380 36504222
    781544 8bvj:C (4.5) BS01 rna 3.1.11.2 GO:0003824 ... Q51380 36504222
    781545 8bvj:D (4.5) BS01 rna ? GO:0003723 ... A6VD57 36504222
    781546 8bvj:F (4.5) BS01 rna ? GO:0003723 ... A6VD57 36504222
    781547 8bvj:G (4.5) BS01 rna 3.1.11.2 GO:0003824 ... Q51380 36504222
    781548 8bvj:I (4.5) BS01 rna ? GO:0003723 ... A6VD57 36504222
    781549 8bvj:K (4.5) BS01 rna ? GO:0003723 ... A6VD57 36504222
    781550 8bvj:L (4.5) BS01 rna ? GO:0003723 ... A6VD57 36504222
    781551 8bvj:M (4.5) BS01 rna ? GO:0003723 ... A6VD57 36504222
    781552 8bvj:N (4.5) BS01 rna ? GO:0003723 ... A6VD57 36504222
    781553 8bvj:P (4.5) BS01 rna ? GO:0003723 ... A6VD57 36504222
    781554 8bvj:Q (4.5) BS01 rna 3.1.11.2 GO:0003824 ... Q51380 36504222
    781555 8bvj:R (4.5) BS01 rna ? GO:0003723 ... A6VD57 36504222
    781556 8bvj:S (4.5) BS01 rna ? GO:0003723 ... A6VD57 36504222
    781557 8bvj:U (4.5) BS01 rna ? GO:0003723 ... A6VD57 36504222
    781558 8bvj:W (4.5) BS01 rna ? GO:0003723 ... A6VD57 36504222
    781559 8bvj:X (4.5) BS01 rna ? GO:0003723 ... A6VD57 36504222
    781560 8bvj:Y (4.5) BS01 rna ? GO:0003723 ... A6VD57 36504222
    781561 8bvk:A (2.0) BS01 MN N/A N/A N/A 37932298
    781562 8bvk:A (2.0) BS02 MN N/A N/A N/A 37932298
    781563 8bvk:B (2.0) BS01 MN N/A N/A N/A 37932298
    781564 8bvl:A (2.24) BS01 ZN 2.3.2.31 GO:0008270 ... Q9BYM8 36685275
    781565 8bvl:A (2.24) BS02 ZN 2.3.2.31 GO:0008270 ... Q9BYM8 36685275
    781566 8bvl:A (2.24) BS03 ZN 2.3.2.31 GO:0008270 ... Q9BYM8 36685275
    781567 8bvl:A (2.24) BS04 ZN 2.3.2.31 GO:0008270 ... Q9BYM8 36685275
    781568 8bvl:A (2.24) BS05 ZN 2.3.2.31 GO:0008270 ... Q9BYM8 36685275
    781569 8bvl:B (2.24) BS01 ZN 2.3.2.31 GO:0008270 ... Q9BYM8 36685275
    781570 8bvl:B (2.24) BS02 ZN 2.3.2.31 GO:0008270 ... Q9BYM8 36685275
    781571 8bvl:B (2.24) BS03 ZN 2.3.2.31 GO:0008270 ... Q9BYM8 36685275
    781572 8bvl:B (2.24) BS04 ZN 2.3.2.31 GO:0008270 ... Q9BYM8 36685275
    781573 8bvl:B (2.24) BS05 ZN 2.3.2.31 GO:0008270 ... Q9BYM8 36685275
    781574 8bvm:A (3.8) BS01 rna 3.1.11.2 GO:0003824 ... Q51380 36504222
    781575 8bvm:B (3.8) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    781576 8bvm:C (3.8) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    781577 8bvm:D (3.8) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    781578 8bvm:E (3.8) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    781579 8bvm:F (3.8) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    781580 8bvm:G (3.8) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    781581 8bvm:H (3.8) BS01 rna 3.1.11.2 GO:0003824 ... Q51380 36504222
    781582 8bvm:I (3.8) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    781583 8bvm:J (3.8) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    781584 8bvm:K (3.8) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    781585 8bvm:L (3.8) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    781586 8bvm:N (3.8) BS01 rna 3.1.11.2 GO:0003824 ... Q51380 36504222
    781587 8bvm:O (3.8) BS01 rna ? GO:0003723 ... Q9HUM0 36504222
    781588 8bvq:A (3.3) BS01 peptide ? GO:0005515 ... P0A940 37162386
    781589 8bvs:A (3.61) BS01 TFO ? GO:0005452 ... O35956 37482561
    781590 8bvt:A (3.94) BS01 RTO ? GO:0005452 ... O35956 37482561
    781591 8bvw:0 (4.0) BS01 dna 5.6.2.4 GO:0000112 ... P19447 37148879
    781592 8bvw:0 (4.0) BS02 dna 5.6.2.4 GO:0000112 ... P19447 37148879
    781593 8bvw:0 (4.0) BS03 peptide 5.6.2.4 GO:0000112 ... P19447 37148879
    781594 8bvw:0 (4.0) BS04 peptide 5.6.2.4 GO:0000112 ... P19447 37148879
    781595 8bvw:1 (4.0) BS01 SF4 3.6.4.12 GO:0000439 ... P18074 37148879
    781596 8bvw:4 (4.0) BS01 ZN ? GO:0000438 ... Q13888 37148879
    781597 8bvw:4 (4.0) BS02 ZN ? GO:0000438 ... Q13888 37148879
    781598 8bvw:4 (4.0) BS03 ZN ? GO:0000438 ... Q13888 37148879
    781599 8bvw:5 (4.0) BS01 ZN ? GO:0000438 ... Q13889 37148879
    781600 8bvw:5 (4.0) BS02 ZN ? GO:0000438 ... Q13889 37148879

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).