SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    78001 2d0h:A (2.1) BS08 CA 3.2.1.135 GO:0004553 ... Q60053 16302977
    78002 2d0n:A (1.57) BS01 peptide ? N/A O89100 17010654
    78003 2d0n:C (1.57) BS01 peptide ? N/A O89100 17010654
    78004 2d0n:C (1.57) BS02 peptide ? N/A O89100 17010654
    78005 2d0o:A (2.0) BS01 MG ? GO:0005515 ... O68195 16338403
    78006 2d0o:A (2.0) BS02 ADP ? GO:0005515 ... O68195 16338403
    78007 2d0o:C (2.0) BS01 MG ? GO:0005515 ... O68195 16338403
    78008 2d0o:C (2.0) BS02 ADP ? GO:0005515 ... O68195 16338403
    78009 2d0p:A (3.0) BS01 CA ? GO:0005515 ... O68195 16338403
    78010 2d0p:C (3.0) BS01 CA ? GO:0005515 ... O68195 16338403
    78011 2d0q:A (1.65) BS01 FE 4.2.1.84 GO:0003824 ... P13448 N/A
    78012 2d0q:A (1.65) BS02 CYI 4.2.1.84 GO:0003824 ... P13448 N/A
    78013 2d0q:B (1.65) BS01 CYI 4.2.1.84 GO:0018822 ... P13449 N/A
    78014 2d0s:A (2.2) BS01 HEC ? GO:0005506 ... Q76IQ6 16681384
    78015 2d0t:A (2.3) BS01 HEM 1.13.11.52 GO:0004833 ... P14902 16477023
    78016 2d0t:A (2.3) BS02 PIM 1.13.11.52 GO:0004833 ... P14902 16477023 BindingDB: IC50=48000nM
    78017 2d0t:B (2.3) BS01 HEM 1.13.11.52 GO:0004833 ... P14902 16477023
    78018 2d0t:B (2.3) BS02 PIM 1.13.11.52 GO:0004833 ... P14902 16477023 BindingDB: IC50=48000nM
    78019 2d0u:A (3.4) BS01 HEM 1.13.11.52 GO:0004833 ... P14902 16477023
    78020 2d0u:B (3.4) BS01 HEM 1.13.11.52 GO:0004833 ... P14902 16477023
    78021 2d0v:A (2.49) BS01 CA 1.1.99.8 GO:0003824 ... Q4AE26 16533029
    78022 2d0v:A (2.49) BS02 PQQ 1.1.99.8 GO:0003824 ... Q4AE26 16533029
    78023 2d0v:D (2.49) BS01 CA 1.1.99.8 GO:0003824 ... Q4AE26 16533029
    78024 2d0v:D (2.49) BS02 PQQ 1.1.99.8 GO:0003824 ... Q4AE26 16533029
    78025 2d0v:I (2.49) BS01 CA 1.1.99.8 GO:0003824 ... Q4AE26 16533029
    78026 2d0v:I (2.49) BS02 PQQ 1.1.99.8 GO:0003824 ... Q4AE26 16533029
    78027 2d0w:A (1.98) BS01 ZN ? GO:0005506 ... Q4AE24 16533029
    78028 2d0w:A (1.98) BS02 ZN ? GO:0005506 ... Q4AE24 16533029
    78029 2d0w:A (1.98) BS03 ZN ? GO:0005506 ... Q4AE24 16533029
    78030 2d0w:A (1.98) BS04 HEM ? GO:0005506 ... Q4AE24 16533029
    78031 2d0w:B (1.98) BS01 ZN ? GO:0005506 ... Q4AE24 16533029
    78032 2d0w:B (1.98) BS02 ZN ? GO:0005506 ... Q4AE24 16533029
    78033 2d0w:B (1.98) BS03 ZN ? GO:0005506 ... Q4AE24 16533029
    78034 2d0w:B (1.98) BS04 HEM ? GO:0005506 ... Q4AE24 16533029
    78035 2d10:A (2.5) BS01 peptide ? GO:0003779 ... P26043 16615918
    78036 2d10:B (2.5) BS01 peptide ? GO:0003779 ... P26043 16615918
    78037 2d10:C (2.5) BS01 peptide ? GO:0003779 ... P26043 16615918
    78038 2d10:D (2.5) BS01 peptide ? GO:0003779 ... P26043 16615918
    78039 2d11:A (2.81) BS01 peptide ? GO:0003779 ... P26043 16615918
    78040 2d11:B (2.81) BS01 peptide ? GO:0003779 ... P26043 16615918
    78041 2d11:C (2.81) BS01 peptide ? GO:0003779 ... P26043 16615918
    78042 2d11:D (2.81) BS01 peptide ? GO:0003779 ... P26043 16615918
    78043 2d1c:A (1.8) BS01 NAP 1.1.1.42 GO:0000287 ... P33197 N/A
    78044 2d1c:A (1.8) BS02 NAP 1.1.1.42 GO:0000287 ... P33197 N/A
    78045 2d1c:B (1.8) BS01 NAP 1.1.1.42 GO:0000287 ... P33197 N/A
    78046 2d1c:B (1.8) BS02 NAP 1.1.1.42 GO:0000287 ... P33197 N/A
    78047 2d1e:A (1.51) BS01 BLA 1.3.7.5 GO:0010024 ... Q55891 16380422
    78048 2d1f:A (2.5) BS01 PLP 4.2.3.1 GO:0004795 ... P9WG59 18621388
    78049 2d1f:B (2.5) BS01 PLP 4.2.3.1 GO:0004795 ... P9WG59 18621388
    78050 2d1g:A (1.75) BS01 VO4 3.1.3.2 GO:0016788 ... A0Q436 16899453
    78051 2d1g:B (1.75) BS01 VO4 3.1.3.2 GO:0016788 ... A0Q436 16899453
    78052 2d1j:A (2.2) BS01 CA 3.4.21.6 GO:0004252 ... P00742 15911309
    78053 2d1j:A (2.2) BS02 CA 3.4.21.6 GO:0004252 ... P00742 15911309
    78054 2d1k:A (2.5) BS01 peptide 3.6.4.- GO:0000287 ... P68135 17292833
    78055 2d1k:A (2.5) BS02 ATP 3.6.4.- GO:0000287 ... P68135 17292833
    78056 2d1k:B (2.5) BS01 peptide 3.1.21.1 GO:0002283 ... P00639 17292833
    78057 2d1k:B (2.5) BS02 CA 3.1.21.1 GO:0002283 ... P00639 17292833
    78058 2d1k:B (2.5) BS03 MG 3.1.21.1 GO:0002283 ... P00639 17292833
    78059 2d1n:A (2.37) BS01 ZN 3.4.24.- GO:0004222 ... P45452 16603129
    78060 2d1n:A (2.37) BS02 ZN 3.4.24.- GO:0004222 ... P45452 16603129
    78061 2d1n:A (2.37) BS03 CA 3.4.24.- GO:0004222 ... P45452 16603129
    78062 2d1n:A (2.37) BS04 CA 3.4.24.- GO:0004222 ... P45452 16603129
    78063 2d1n:A (2.37) BS05 CA 3.4.24.- GO:0004222 ... P45452 16603129
    78064 2d1n:A (2.37) BS06 FA4 3.4.24.- GO:0004222 ... P45452 16603129 MOAD: Ki=0.007uM
    78065 2d1n:B (2.37) BS01 ZN 3.4.24.- GO:0004222 ... P45452 16603129
    78066 2d1n:B (2.37) BS02 ZN 3.4.24.- GO:0004222 ... P45452 16603129
    78067 2d1n:B (2.37) BS03 CA 3.4.24.- GO:0004222 ... P45452 16603129
    78068 2d1n:B (2.37) BS04 CA 3.4.24.- GO:0004222 ... P45452 16603129
    78069 2d1n:B (2.37) BS05 CA 3.4.24.- GO:0004222 ... P45452 16603129
    78070 2d1n:B (2.37) BS06 FA4 3.4.24.- GO:0004222 ... P45452 16603129 MOAD: Ki=0.007uM
    78071 2d1o:A (2.02) BS01 ZN 3.4.24.17 GO:0004222 ... P08254 16603129
    78072 2d1o:A (2.02) BS02 ZN 3.4.24.17 GO:0004222 ... P08254 16603129
    78073 2d1o:A (2.02) BS03 CA 3.4.24.17 GO:0004222 ... P08254 16603129
    78074 2d1o:A (2.02) BS04 CA 3.4.24.17 GO:0004222 ... P08254 16603129
    78075 2d1o:A (2.02) BS05 CA 3.4.24.17 GO:0004222 ... P08254 16603129
    78076 2d1o:A (2.02) BS06 FA4 3.4.24.17 GO:0004222 ... P08254 16603129 MOAD: Ki=0.02uM
    78077 2d1o:B (2.02) BS01 ZN 3.4.24.17 GO:0004222 ... P08254 16603129
    78078 2d1o:B (2.02) BS02 ZN 3.4.24.17 GO:0004222 ... P08254 16603129
    78079 2d1o:B (2.02) BS03 CA 3.4.24.17 GO:0004222 ... P08254 16603129
    78080 2d1o:B (2.02) BS04 CA 3.4.24.17 GO:0004222 ... P08254 16603129
    78081 2d1o:B (2.02) BS05 CA 3.4.24.17 GO:0004222 ... P08254 16603129
    78082 2d1o:B (2.02) BS06 FA4 3.4.24.17 GO:0004222 ... P08254 16603129 MOAD: Ki=0.02uM
    78083 2d1q:A (2.3) BS01 AMP 1.13.12.7 GO:0005777 ... P13129 16541080
    78084 2d1r:A (1.6) BS01 AMP 1.13.12.7 GO:0005777 ... P13129 16541080
    78085 2d1r:A (1.6) BS02 OLU 1.13.12.7 GO:0005777 ... P13129 16541080
    78086 2d1s:A (1.3) BS01 SLU 1.13.12.7 GO:0005777 ... P13129 16541080
    78087 2d1t:A (1.45) BS01 SLU 1.13.12.7 GO:0005777 ... P13129 16541080
    78088 2d1w:A (1.74) BS01 CU 1.4.3.21 GO:0005507 ... P46881 16487484
    78089 2d1w:B (1.74) BS01 CU 1.4.3.21 GO:0005507 ... P46881 16487484
    78090 2d1x:A (1.9) BS01 peptide ? N/A Q14247 16636290
    78091 2d1x:B (1.9) BS01 peptide ? N/A Q14247 16636290
    78092 2d1x:C (1.9) BS01 peptide ? N/A Q14247 16636290
    78093 2d1x:D (1.9) BS01 peptide ? N/A Q14247 16636290
    78094 2d1y:A (1.65) BS01 NAD ? GO:0016616 ... Q5SLC4 18926808
    78095 2d1y:B (1.65) BS01 NAD ? GO:0016616 ... Q5SLC4 18926808
    78096 2d1y:C (1.65) BS01 NAD ? GO:0016616 ... Q5SLC4 18926808
    78097 2d1y:D (1.65) BS01 NAD ? GO:0016616 ... Q5SLC4 18926808
    78098 2d20:A (1.85) BS01 XYS 3.2.1.8 GO:0004553 ... Q7SI98 19279191
    78099 2d20:A (1.85) BS02 XYS 3.2.1.8 GO:0004553 ... Q7SI98 19279191
    78100 2d20:A (1.85) BS03 NPO 3.2.1.8 GO:0004553 ... Q7SI98 19279191
    78101 2d20:B (1.85) BS01 XYS 3.2.1.8 GO:0004553 ... Q7SI98 19279191
    78102 2d20:B (1.85) BS02 XYS 3.2.1.8 GO:0004553 ... Q7SI98 19279191
    78103 2d20:B (1.85) BS03 NPO 3.2.1.8 GO:0004553 ... Q7SI98 19279191
    78104 2d22:A (1.7) BS01 XYS 3.2.1.8 GO:0004553 ... Q7SI98 19279191
    78105 2d22:A (1.7) BS02 XYS 3.2.1.8 GO:0004553 ... Q7SI98 19279191
    78106 2d22:B (1.7) BS01 XYS 3.2.1.8 GO:0004553 ... Q7SI98 19279191
    78107 2d22:B (1.7) BS02 XYS 3.2.1.8 GO:0004553 ... Q7SI98 19279191
    78108 2d23:A (1.95) BS01 XYS 3.2.1.8 GO:0004553 ... Q7SI98 19279191
    78109 2d23:A (1.95) BS02 XYS 3.2.1.8 GO:0004553 ... Q7SI98 19279191
    78110 2d23:A (1.95) BS03 AZI 3.2.1.8 GO:0004553 ... Q7SI98 19279191
    78111 2d23:B (1.95) BS01 XYS 3.2.1.8 GO:0004553 ... Q7SI98 19279191
    78112 2d23:B (1.95) BS02 XYS 3.2.1.8 GO:0004553 ... Q7SI98 19279191
    78113 2d23:B (1.95) BS03 AZI 3.2.1.8 GO:0004553 ... Q7SI98 19279191
    78114 2d24:A (1.85) BS01 XYS 3.2.1.8 GO:0004553 ... Q7SI98 19279191
    78115 2d24:A (1.85) BS02 XYS 3.2.1.8 GO:0004553 ... Q7SI98 19279191
    78116 2d24:A (1.85) BS03 XYS 3.2.1.8 GO:0004553 ... Q7SI98 19279191
    78117 2d24:A (1.85) BS04 XYS 3.2.1.8 GO:0004553 ... Q7SI98 19279191
    78118 2d24:A (1.85) BS05 XYS 3.2.1.8 GO:0004553 ... Q7SI98 19279191
    78119 2d24:A (1.85) BS06 XYS 3.2.1.8 GO:0004553 ... Q7SI98 19279191
    78120 2d24:A (1.85) BS07 XYS 3.2.1.8 GO:0004553 ... Q7SI98 19279191
    78121 2d24:A (1.85) BS08 XYS 3.2.1.8 GO:0004553 ... Q7SI98 19279191
    78122 2d24:A (1.85) BS09 XYS 3.2.1.8 GO:0004553 ... Q7SI98 19279191
    78123 2d24:B (1.85) BS01 XYS 3.2.1.8 GO:0004553 ... Q7SI98 19279191
    78124 2d24:B (1.85) BS02 XYS 3.2.1.8 GO:0004553 ... Q7SI98 19279191
    78125 2d24:B (1.85) BS03 XYS 3.2.1.8 GO:0004553 ... Q7SI98 19279191
    78126 2d24:B (1.85) BS04 XYS 3.2.1.8 GO:0004553 ... Q7SI98 19279191
    78127 2d24:B (1.85) BS05 XYS 3.2.1.8 GO:0004553 ... Q7SI98 19279191
    78128 2d24:B (1.85) BS06 XYS 3.2.1.8 GO:0004553 ... Q7SI98 19279191
    78129 2d29:A (1.65) BS01 FAD ? GO:0003995 ... Q5SGZ2 N/A
    78130 2d29:B (1.65) BS01 FAD ? GO:0003995 ... Q5SGZ2 N/A
    78131 2d2c:A (3.8) BS01 HEM ? GO:0009055 ... P83791 16371475
    78132 2d2c:A (3.8) BS02 HEM ? GO:0009055 ... P83791 16371475
    78133 2d2c:A (3.8) BS03 HEC ? GO:0009055 ... P83791 16371475
    78134 2d2c:B (3.8) BS01 peptide ? GO:0008121 ... P83792 16371475
    78135 2d2c:B (3.8) BS02 HEC ? GO:0008121 ... P83792 16371475
    78136 2d2c:B (3.8) BS03 BNT ? GO:0008121 ... P83792 16371475
    78137 2d2c:B (3.8) BS04 CLA ? GO:0008121 ... P83792 16371475
    78138 2d2c:C (3.8) BS01 peptide ? GO:0005506 ... P83793 16371475
    78139 2d2c:C (3.8) BS02 BNT ? GO:0005506 ... P83793 16371475
    78140 2d2c:C (3.8) BS03 HEM ? GO:0005506 ... P83793 16371475
    78141 2d2c:D (3.8) BS01 FES 7.1.1.6 GO:0004497 ... P83794 16371475
    78142 2d2c:F (3.8) BS01 peptide ? GO:0009055 ... P83796 16371475
    78143 2d2c:F (3.8) BS02 peptide ? GO:0009055 ... P83796 16371475
    78144 2d2c:N (3.8) BS01 HEM ? GO:0009055 ... P83791 16371475
    78145 2d2c:N (3.8) BS02 HEM ? GO:0009055 ... P83791 16371475
    78146 2d2c:N (3.8) BS03 HEC ? GO:0009055 ... P83791 16371475
    78147 2d2c:N (3.8) BS04 CLA ? GO:0009055 ... P83791 16371475
    78148 2d2c:O (3.8) BS01 peptide ? GO:0008121 ... P83792 16371475
    78149 2d2c:O (3.8) BS02 HEC ? GO:0008121 ... P83792 16371475
    78150 2d2c:O (3.8) BS03 BNT ? GO:0008121 ... P83792 16371475
    78151 2d2c:O (3.8) BS04 CLA ? GO:0008121 ... P83792 16371475
    78152 2d2c:P (3.8) BS01 peptide ? GO:0005506 ... P83793 16371475
    78153 2d2c:P (3.8) BS02 BNT ? GO:0005506 ... P83793 16371475
    78154 2d2c:P (3.8) BS03 HEM ? GO:0005506 ... P83793 16371475
    78155 2d2c:Q (3.8) BS01 FES 7.1.1.6 GO:0004497 ... P83794 16371475
    78156 2d2c:S (3.8) BS01 peptide ? GO:0009055 ... P83796 16371475
    78157 2d2c:S (3.8) BS02 peptide ? GO:0009055 ... P83796 16371475
    78158 2d2d:A (2.7) BS01 ENB 2.1.1.-
    2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0C6U8 16128623
    78159 2d2d:B (2.7) BS01 ENB 2.1.1.-
    2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0C6U8 16128623
    78160 2d2f:A (1.9) BS01 MG ? GO:0005524 ... Q5SH92 16216272
    78161 2d2f:A (1.9) BS02 MG ? GO:0005524 ... Q5SH92 16216272
    78162 2d2f:A (1.9) BS03 ADP ? GO:0005524 ... Q5SH92 16216272
    78163 2d2g:A (1.85) BS01 CO 3.1.8.1 GO:0008270 ... Q93LD7 16054447
    78164 2d2g:A (1.85) BS02 CO 3.1.8.1 GO:0008270 ... Q93LD7 16054447
    78165 2d2g:A (1.85) BS03 DZZ 3.1.8.1 GO:0008270 ... Q93LD7 16054447
    78166 2d2h:A (1.8) BS01 CO 3.1.8.1 GO:0008270 ... Q93LD7 16054447
    78167 2d2h:A (1.8) BS02 CO 3.1.8.1 GO:0008270 ... Q93LD7 16054447
    78168 2d2h:A (1.8) BS03 TZZ 3.1.8.1 GO:0008270 ... Q93LD7 16054447
    78169 2d2i:A (2.5) BS01 NAP 1.2.1.- GO:0006006 ... A0ACD6B932 16582475
    78170 2d2i:B (2.5) BS01 NAP 1.2.1.- GO:0006006 ... A0ACD6B932 16582475
    78171 2d2i:O (2.5) BS01 NAP 1.2.1.- GO:0006006 ... A0ACD6B932 16582475
    78172 2d2i:P (2.5) BS01 NAP 1.2.1.- GO:0006006 ... A0ACD6B932 16582475
    78173 2d2i:Q (2.5) BS01 NAP 1.2.1.- GO:0006006 ... A0ACD6B932 16582475
    78174 2d2i:R (2.5) BS01 NAP 1.2.1.- GO:0006006 ... A0ACD6B932 16582475
    78175 2d2j:A (1.75) BS01 CO 3.1.8.1 GO:0008270 ... Q93LD7 16054447
    78176 2d2j:A (1.75) BS02 CO 3.1.8.1 GO:0008270 ... Q93LD7 16054447
    78177 2d2j:A (1.75) BS03 EDO 3.1.8.1 GO:0008270 ... Q93LD7 16054447
    78178 2d2m:A (2.85) BS01 HEM ? GO:0005506 ... Q7M419 16204001
    78179 2d2m:A (2.85) BS02 HEM ? GO:0005506 ... Q7M419 16204001
    78180 2d2m:B (2.85) BS01 HEM ? GO:0005506 ... Q7M413 16204001
    78181 2d2m:B (2.85) BS02 OXY ? GO:0005506 ... Q7M413 16204001
    78182 2d2m:C (2.85) BS01 HEM ? GO:0005506 ... Q7M418 16204001
    78183 2d2m:C (2.85) BS02 OXY ? GO:0005506 ... Q7M418 16204001
    78184 2d2m:D (2.85) BS01 HEM ? GO:0005576 ... Q5KSB7 16204001
    78185 2d2n:A (3.2) BS01 HEM ? GO:0005506 ... Q7M419 16204001
    78186 2d2n:A (3.2) BS02 HEM ? GO:0005506 ... Q7M419 16204001
    78187 2d2n:B (3.2) BS01 HEM ? GO:0005506 ... Q7M413 16204001
    78188 2d2n:B (3.2) BS02 OXY ? GO:0005506 ... Q7M413 16204001
    78189 2d2n:C (3.2) BS01 HEM ? GO:0005506 ... Q7M418 16204001
    78190 2d2n:C (3.2) BS02 OXY ? GO:0005506 ... Q7M418 16204001
    78191 2d2n:D (3.2) BS01 HEM ? GO:0005576 ... Q5KSB7 16204001
    78192 2d2o:A (2.1) BS01 GLC 3.2.1.135 GO:0004553 ... Q08751 16564038
    78193 2d2o:A (2.1) BS02 GLC 3.2.1.135 GO:0004553 ... Q08751 16564038
    78194 2d2o:A (2.1) BS03 GLC 3.2.1.135 GO:0004553 ... Q08751 16564038
    78195 2d2o:A (2.1) BS04 GLC 3.2.1.135 GO:0004553 ... Q08751 16564038
    78196 2d2o:A (2.1) BS05 CA 3.2.1.135 GO:0004553 ... Q08751 16564038
    78197 2d2o:B (2.1) BS01 GLC 3.2.1.135 GO:0004553 ... Q08751 16564038
    78198 2d2o:B (2.1) BS02 GLC 3.2.1.135 GO:0004553 ... Q08751 16564038
    78199 2d2o:B (2.1) BS03 GLC 3.2.1.135 GO:0004553 ... Q08751 16564038
    78200 2d2o:B (2.1) BS04 GLC 3.2.1.135 GO:0004553 ... Q08751 16564038

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).