SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    783001 8c41:B (2.393) BS01 dna 5.6.2.2 GO:0003677 ... P72525 40595483
    783002 8c41:B (2.393) BS02 dna 5.6.2.2 GO:0003677 ... P72525 40595483
    783003 8c41:B (2.393) BS03 MG 5.6.2.2 GO:0003677 ... P72525 40595483
    783004 8c41:B (2.393) BS04 TE9 5.6.2.2 GO:0003677 ... P72525 40595483
    783005 8c42:A (1.4) BS01 peptide ? GO:0001836 ... P31947 37224961
    783006 8c42:A (1.4) BS02 SIT ? GO:0001836 ... P31947 37224961
    783007 8c43:A (1.4) BS01 peptide ? GO:0001836 ... P31947 37224961
    783008 8c43:A (1.4) BS02 SIT ? GO:0001836 ... P31947 37224961
    783009 8c45:A (3.5) BS01 SAM N/A GO:0003676 ... A0A6C7IK61 39174540
    783010 8c45:B (3.5) BS01 SAM N/A GO:0003676 ... A0A6C7IK61 39174540
    783011 8c46:A (2.0) BS01 ZN 3.5.1.6 GO:0003837 ... A0A8F7I7M8 37634202
    783012 8c46:A (2.0) BS02 ZN 3.5.1.6 GO:0003837 ... A0A8F7I7M8 37634202
    783013 8c46:B (2.0) BS01 ZN 3.5.1.6 GO:0003837 ... A0A8F7I7M8 37634202
    783014 8c46:B (2.0) BS02 ZN 3.5.1.6 GO:0003837 ... A0A8F7I7M8 37634202
    783015 8c47:A (2.2) BS01 ATP 3.6.4.- GO:0005856 ... P45520 38340794
    783016 8c48:A (1.4) BS01 MAN 3.2.1.- GO:0004348 ... G2Q1N4 38678481
    783017 8c48:A (1.4) BS02 MAN 3.2.1.- GO:0004348 ... G2Q1N4 38678481
    783018 8c48:A (1.4) BS03 XYP 3.2.1.- GO:0004348 ... G2Q1N4 38678481
    783019 8c48:A (1.4) BS04 XYP 3.2.1.- GO:0004348 ... G2Q1N4 38678481
    783020 8c48:A (1.4) BS05 XYP 3.2.1.- GO:0004348 ... G2Q1N4 38678481
    783021 8c48:A (1.4) BS06 XYP 3.2.1.- GO:0004348 ... G2Q1N4 38678481
    783022 8c48:A (1.4) BS07 XYP 3.2.1.- GO:0004348 ... G2Q1N4 38678481
    783023 8c48:A (1.4) BS08 XYP 3.2.1.- GO:0004348 ... G2Q1N4 38678481
    783024 8c48:B (1.4) BS01 XYP 3.2.1.- GO:0004348 ... G2Q1N4 38678481
    783025 8c48:B (1.4) BS02 XYP 3.2.1.- GO:0004348 ... G2Q1N4 38678481
    783026 8c49:A (1.82) BS01 ANP 6.1.1.26 GO:0004812 ... M9SC49 37051694
    783027 8c49:A (1.82) BS02 MG 6.1.1.26 GO:0004812 ... M9SC49 37051694
    783028 8c49:A (1.82) BS03 MG 6.1.1.26 GO:0004812 ... M9SC49 37051694
    783029 8c49:A (1.82) BS04 MG 6.1.1.26 GO:0004812 ... M9SC49 37051694
    783030 8c49:B (1.82) BS01 ANP 6.1.1.26 GO:0004812 ... M9SC49 37051694
    783031 8c49:B (1.82) BS02 MG 6.1.1.26 GO:0004812 ... M9SC49 37051694
    783032 8c49:B (1.82) BS03 MG 6.1.1.26 GO:0004812 ... M9SC49 37051694
    783033 8c4c:A (2.7) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38064550
    783034 8c4c:A (2.7) BS02 PO4 3.6.4.- GO:0001725 ... P68139 38064550
    783035 8c4c:B (2.7) BS01 PO4 3.6.4.- GO:0001725 ... P68139 38064550
    783036 8c4c:B (2.7) BS02 ADP 3.6.4.- GO:0001725 ... P68139 38064550
    783037 8c4c:C (2.7) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38064550
    783038 8c4c:C (2.7) BS02 PO4 3.6.4.- GO:0001725 ... P68139 38064550
    783039 8c4c:D (2.7) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38064550
    783040 8c4c:D (2.7) BS02 PO4 3.6.4.- GO:0001725 ... P68139 38064550
    783041 8c4c:E (2.7) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38064550
    783042 8c4c:E (2.7) BS02 PO4 3.6.4.- GO:0001725 ... P68139 38064550
    783043 8c4c:F (2.7) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38064550
    783044 8c4c:F (2.7) BS02 PO4 3.6.4.- GO:0001725 ... P68139 38064550
    783045 8c4c:G (2.7) BS01 PO4 3.6.4.- GO:0001725 ... P68139 38064550
    783046 8c4c:G (2.7) BS02 ADP 3.6.4.- GO:0001725 ... P68139 38064550
    783047 8c4c:H (2.7) BS01 PO4 3.6.4.- GO:0001725 ... P68139 38064550
    783048 8c4c:H (2.7) BS02 ADP 3.6.4.- GO:0001725 ... P68139 38064550
    783049 8c4d:A (1.97) BS01 ZN ? GO:0008745 ... N/A 37156923
    783050 8c4e:A (2.6) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38064550
    783051 8c4e:A (2.6) BS02 PO4 3.6.4.- GO:0001725 ... P68139 38064550
    783052 8c4e:B (2.6) BS01 PO4 3.6.4.- GO:0001725 ... P68139 38064550
    783053 8c4e:B (2.6) BS02 ADP 3.6.4.- GO:0001725 ... P68139 38064550
    783054 8c4e:C (2.6) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38064550
    783055 8c4e:D (2.6) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38064550
    783056 8c4e:D (2.6) BS02 PO4 3.6.4.- GO:0001725 ... P68139 38064550
    783057 8c4e:E (2.6) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38064550
    783058 8c4e:F (2.6) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38064550
    783059 8c4e:G (2.6) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38064550
    783060 8c4e:H (2.6) BS01 PO4 3.6.4.- GO:0001725 ... P68139 38064550
    783061 8c4e:H (2.6) BS02 ADP 3.6.4.- GO:0001725 ... P68139 38064550
    783062 8c4f:A (1.4) BS01 peptide ? GO:0001836 ... P31947 37455289
    783063 8c4f:A (1.4) BS02 TG9 ? GO:0001836 ... P31947 37455289
    783064 8c4g:A (1.46) BS01 peptide ? GO:0001836 ... P31947 37455289
    783065 8c4g:A (1.46) BS02 KM8 ? GO:0001836 ... P31947 37455289
    783066 8c4h:A (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    783067 8c4h:B (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    783068 8c4h:C (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    783069 8c4h:D (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    783070 8c4h:E (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    783071 8c4h:F (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    783072 8c4h:G (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    783073 8c4h:H (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    783074 8c4h:I (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    783075 8c4h:J (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    783076 8c4h:K (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    783077 8c4h:L (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    783078 8c4h:M (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    783079 8c4h:N (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    783080 8c4h:a (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    783081 8c4h:b (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    783082 8c4h:c (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    783083 8c4h:d (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    783084 8c4h:e (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    783085 8c4h:f (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    783086 8c4h:g (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    783087 8c4h:h (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    783088 8c4h:i (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    783089 8c4h:j (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    783090 8c4h:k (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    783091 8c4h:l (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    783092 8c4h:m (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    783093 8c4h:n (3.485) BS01 rna N/A GO:0003723 ... O89339 38890308
    783094 8c4j:A (1.83) BS01 TI5 2.7.7.85 GO:0004016 ... Q8Y5E4 37223749
    783095 8c4j:B (1.83) BS01 TI5 2.7.7.85 GO:0004016 ... Q8Y5E4 37223749
    783096 8c4l:A (1.86) BS01 FAD ? GO:0016491 ... A0A220UGT4 40080164
    783097 8c4l:B (1.86) BS01 FAD ? GO:0016491 ... A0A220UGT4 40080164
    783098 8c4m:A (1.51) BS01 ADN 2.7.7.85 GO:0004016 ... Q8Y5E4 37223749
    783099 8c4n:A (1.75) BS01 AMP 2.7.7.85 GO:0004016 ... Q8Y5E4 37223749
    783100 8c4n:B (1.75) BS01 AMP 2.7.7.85 GO:0004016 ... Q8Y5E4 37223749
    783101 8c4o:A (1.97) BS01 ATP 2.7.7.85 GO:0004016 ... Q8Y5E4 37223749
    783102 8c4o:B (1.97) BS01 ATP 2.7.7.85 GO:0004016 ... Q8Y5E4 37223749
    783103 8c4p:A (1.2) BS01 TJ9 2.7.7.85 GO:0004016 ... Q8Y5E4 37223749
    783104 8c4p:B (1.2) BS01 TJ9 2.7.7.85 GO:0004016 ... Q8Y5E4 37223749
    783105 8c4r:A (1.55) BS01 ADE 2.7.7.85 GO:0004016 ... Q8Y5E4 37223749
    783106 8c4t:A (3.23) BS01 rna 2.7.7.48
    3.1.-.-
    GO:0000166 ... P23456 37221161
    783107 8c4u:A (3.36) BS01 rna 2.7.7.48
    3.1.-.-
    GO:0000166 ... P23456 37221161
    783108 8c4u:A (3.36) BS02 rna 2.7.7.48
    3.1.-.-
    GO:0000166 ... P23456 37221161
    783109 8c4v:A (3.14) BS01 rna 2.7.7.48
    3.1.-.-
    GO:0000166 ... P23456 37221161
    783110 8c4v:A (3.14) BS02 rna 2.7.7.48
    3.1.-.-
    GO:0000166 ... P23456 37221161
    783111 8c4v:A (3.14) BS03 rna 2.7.7.48
    3.1.-.-
    GO:0000166 ... P23456 37221161
    783112 8c4v:A (3.14) BS04 rna 2.7.7.48
    3.1.-.-
    GO:0000166 ... P23456 37221161
    783113 8c4v:A (3.14) BS05 rna 2.7.7.48
    3.1.-.-
    GO:0000166 ... P23456 37221161
    783114 8c4v:A (3.14) BS06 MG 2.7.7.48
    3.1.-.-
    GO:0000166 ... P23456 37221161
    783115 8c4w:A (1.95) BS01 ZN 3.1.4.39 GO:0003676 ... Q64610 37976710
    783116 8c4w:A (1.95) BS02 ZN 3.1.4.39 GO:0003676 ... Q64610 37976710
    783117 8c4w:A (1.95) BS03 5JK 3.1.4.39 GO:0003676 ... Q64610 37976710
    783118 8c4w:A (1.95) BS04 TIJ 3.1.4.39 GO:0003676 ... Q64610 37976710
    783119 8c4w:A (1.95) BS05 CA 3.1.4.39 GO:0003676 ... Q64610 37976710
    783120 8c4x:A (1.52) BS01 CA N/A GO:0004252 ... A0A0U5AS91 39020178
    783121 8c4y:AAA (1.6) BS01 FE ? GO:0030288 ... Q7V0T9 38489389
    783122 8c4z:B (1.47) BS01 CA N/A GO:0004252 ... P80146 39020178
    783123 8c4z:B (1.47) BS02 MG N/A GO:0004252 ... P80146 39020178
    783124 8c51:A (2.4) BS01 GDP 1.1.1.205 GO:0000166 ... P50098 38402242
    783125 8c51:A (2.4) BS02 ATP 1.1.1.205 GO:0000166 ... P50098 38402242
    783126 8c51:B (2.4) BS01 ATP 1.1.1.205 GO:0000166 ... P50098 38402242
    783127 8c51:B (2.4) BS02 GDP 1.1.1.205 GO:0000166 ... P50098 38402242
    783128 8c53:A (2.3) BS01 GDP 1.1.1.205 GO:0000166 ... P50098 38402242
    783129 8c53:A (2.3) BS02 ATP 1.1.1.205 GO:0000166 ... P50098 38402242
    783130 8c53:B (2.3) BS01 ATP 1.1.1.205 GO:0000166 ... P50098 38402242
    783131 8c53:B (2.3) BS02 GDP 1.1.1.205 GO:0000166 ... P50098 38402242
    783132 8c53:B (2.3) BS03 ATP 1.1.1.205 GO:0000166 ... P50098 38402242
    783133 8c54:A (2.52) BS01 NAI N/A GO:0004777 ... A0AAJ6N661 37886098
    783134 8c54:B (2.52) BS01 NAI N/A GO:0004777 ... A0AAJ6N661 37886098
    783135 8c54:C (2.52) BS01 NAI N/A GO:0004777 ... A0AAJ6N661 37886098
    783136 8c54:D (2.52) BS01 NAI N/A GO:0004777 ... A0AAJ6N661 37886098
    783137 8c56:A (2.4) BS01 dna 2.1.1.37 GO:0003886 ... Q8EVR5 38966999
    783138 8c56:A (2.4) BS02 dna 2.1.1.37 GO:0003886 ... Q8EVR5 38966999
    783139 8c56:A (2.4) BS03 SAH 2.1.1.37 GO:0003886 ... Q8EVR5 38966999
    783140 8c57:A (1.95) BS01 dna 2.1.1.37 GO:0003886 ... Q8EVR5 38966999
    783141 8c57:A (1.95) BS02 dna 2.1.1.37 GO:0003886 ... Q8EVR5 38966999
    783142 8c57:A (1.95) BS03 SAM 2.1.1.37 GO:0003886 ... Q8EVR5 38966999
    783143 8c58:A (1.85) BS01 dna 2.1.1.37 GO:0003886 ... Q8EVR5 38966999
    783144 8c58:A (1.85) BS02 dna 2.1.1.37 GO:0003886 ... Q8EVR5 38966999
    783145 8c58:A (1.85) BS03 SAM 2.1.1.37 GO:0003886 ... Q8EVR5 38966999
    783146 8c59:A (1.7) BS01 dna 2.1.1.37 GO:0003886 ... Q8EVR5 38966999
    783147 8c59:A (1.7) BS02 dna 2.1.1.37 GO:0003886 ... Q8EVR5 38966999
    783148 8c59:A (1.7) BS03 SAM 2.1.1.37 GO:0003886 ... Q8EVR5 38966999
    783149 8c5c:N (5.3) BS01 MG 3.6.5.- GO:0000226 ... P81947 36541084
    783150 8c5c:N (5.3) BS02 GTP 3.6.5.- GO:0000226 ... P81947 36541084
    783151 8c5c:O (5.3) BS01 MG 3.6.5.- GO:0000226 ... P81947 36541084
    783152 8c5c:O (5.3) BS02 GTP 3.6.5.- GO:0000226 ... P81947 36541084
    783153 8c5c:P (5.3) BS01 GTP 3.6.5.- GO:0000226 ... P81947 36541084
    783154 8c5c:Q (5.3) BS01 MG 3.6.5.- GO:0000226 ... P81947 36541084
    783155 8c5c:Q (5.3) BS02 GTP 3.6.5.- GO:0000226 ... P81947 36541084
    783156 8c5c:R (5.3) BS01 MG 3.6.5.- GO:0000226 ... P81947 36541084
    783157 8c5c:R (5.3) BS02 GTP 3.6.5.- GO:0000226 ... P81947 36541084
    783158 8c5c:S (5.3) BS01 GTP 3.6.5.- GO:0000226 ... P81947 36541084
    783159 8c5c:T (5.3) BS01 GTP 3.6.5.- GO:0000226 ... P81947 36541084
    783160 8c5c:U (5.3) BS01 MG 3.6.5.- GO:0000226 ... P81947 36541084
    783161 8c5c:U (5.3) BS02 GTP 3.6.5.- GO:0000226 ... P81947 36541084
    783162 8c5c:V (5.3) BS01 MG 3.6.5.- GO:0000226 ... P81947 36541084
    783163 8c5c:V (5.3) BS02 GTP 3.6.5.- GO:0000226 ... P81947 36541084
    783164 8c5c:W (5.3) BS01 MG 3.6.5.- GO:0000226 ... P81947 36541084
    783165 8c5c:W (5.3) BS02 GTP 3.6.5.- GO:0000226 ... P81947 36541084
    783166 8c5c:X (5.3) BS01 MG 3.6.5.- GO:0000226 ... P81947 36541084
    783167 8c5c:X (5.3) BS02 GTP 3.6.5.- GO:0000226 ... P81947 36541084
    783168 8c5c:Y (5.3) BS01 MG 3.6.5.- GO:0000226 ... P81947 36541084
    783169 8c5c:Y (5.3) BS02 GTP 3.6.5.- GO:0000226 ... P81947 36541084
    783170 8c5c:Z (5.3) BS01 MG 3.6.5.- GO:0000226 ... P81947 36541084
    783171 8c5c:Z (5.3) BS02 GTP 3.6.5.- GO:0000226 ... P81947 36541084
    783172 8c5c:a (5.3) BS01 TA1 ? GO:0003924 ... A0A452DIL8 36541084
    783173 8c5c:a (5.3) BS02 GDP ? GO:0003924 ... A0A452DIL8 36541084
    783174 8c5c:b (5.3) BS01 TA1 ? GO:0003924 ... A0A452DIL8 36541084
    783175 8c5c:b (5.3) BS02 GDP ? GO:0003924 ... A0A452DIL8 36541084
    783176 8c5c:c (5.3) BS01 TA1 ? GO:0003924 ... A0A452DIL8 36541084
    783177 8c5c:c (5.3) BS02 GDP ? GO:0003924 ... A0A452DIL8 36541084
    783178 8c5c:d (5.3) BS01 TA1 ? GO:0003924 ... A0A452DIL8 36541084
    783179 8c5c:d (5.3) BS02 GDP ? GO:0003924 ... A0A452DIL8 36541084
    783180 8c5c:e (5.3) BS01 TA1 ? GO:0003924 ... A0A452DIL8 36541084
    783181 8c5c:e (5.3) BS02 GDP ? GO:0003924 ... A0A452DIL8 36541084
    783182 8c5c:f (5.3) BS01 TA1 ? GO:0003924 ... A0A452DIL8 36541084
    783183 8c5c:f (5.3) BS02 GDP ? GO:0003924 ... A0A452DIL8 36541084
    783184 8c5c:g (5.3) BS01 TA1 ? GO:0003924 ... A0A452DIL8 36541084
    783185 8c5c:g (5.3) BS02 GDP ? GO:0003924 ... A0A452DIL8 36541084
    783186 8c5c:h (5.3) BS01 TA1 ? GO:0003924 ... A0A452DIL8 36541084
    783187 8c5c:h (5.3) BS02 GDP ? GO:0003924 ... A0A452DIL8 36541084
    783188 8c5c:i (5.3) BS01 TA1 ? GO:0003924 ... A0A452DIL8 36541084
    783189 8c5c:i (5.3) BS02 GDP ? GO:0003924 ... A0A452DIL8 36541084
    783190 8c5c:j (5.3) BS01 TA1 ? GO:0003924 ... A0A452DIL8 36541084
    783191 8c5c:j (5.3) BS02 GDP ? GO:0003924 ... A0A452DIL8 36541084
    783192 8c5c:k (5.3) BS01 TA1 ? GO:0003924 ... A0A452DIL8 36541084
    783193 8c5c:k (5.3) BS02 GDP ? GO:0003924 ... A0A452DIL8 36541084
    783194 8c5c:l (5.3) BS01 TA1 ? GO:0003924 ... A0A452DIL8 36541084
    783195 8c5c:l (5.3) BS02 GDP ? GO:0003924 ... A0A452DIL8 36541084
    783196 8c5c:m (5.3) BS01 TA1 ? GO:0003924 ... A0A452DIL8 36541084
    783197 8c5c:m (5.3) BS02 GDP ? GO:0003924 ... A0A452DIL8 36541084
    783198 8c5d:A (1.28) BS01 GTB 2.5.1.18 GO:0000122 ... P19157 37189361
    783199 8c5d:A (1.28) BS02 CA 2.5.1.18 GO:0000122 ... P19157 37189361
    783200 8c5d:A (1.28) BS03 CA 2.5.1.18 GO:0000122 ... P19157 37189361

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).