SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    783201 8c5d:B (1.28) BS01 GTB 2.5.1.18 GO:0000122 ... P19157 37189361
    783202 8c5d:B (1.28) BS02 CA 2.5.1.18 GO:0000122 ... P19157 37189361
    783203 8c5d:B (1.28) BS03 CA 2.5.1.18 GO:0000122 ... P19157 37189361
    783204 8c5e:A (1.65) BS01 FMN 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36983061
    783205 8c5e:A (1.65) BS02 NIO 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36983061
    783206 8c5e:A (1.65) BS03 FMN 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36983061
    783207 8c5e:B (1.65) BS01 FMN 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36983061
    783208 8c5e:B (1.65) BS02 FMN 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36983061
    783209 8c5e:B (1.65) BS03 NIO 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36983061
    783210 8c5f:A (1.6) BS01 FMN 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36983061
    783211 8c5f:A (1.6) BS02 FMN 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36983061
    783212 8c5f:B (1.6) BS01 FMN 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36983061
    783213 8c5f:B (1.6) BS02 FMN 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36983061
    783214 8c5h:S (1.68) BS01 CA ? GO:0016020 ... P21707 37421204
    783215 8c5l:A (2.6) BS01 peptide ? GO:0005515 ... P0AEX9
    P10588
    40931005
    783216 8c5l:A (2.6) BS02 GLC ? GO:0005515 ... P0AEX9
    P10588
    40931005
    783217 8c5l:A (2.6) BS03 GLC ? GO:0005515 ... P0AEX9
    P10588
    40931005
    783218 8c5l:B (2.6) BS01 peptide ? GO:0005515 ... P0AEX9
    P10588
    40931005
    783219 8c5l:B (2.6) BS02 GLC ? GO:0005515 ... P0AEX9
    P10588
    40931005
    783220 8c5l:B (2.6) BS03 GLC ? GO:0005515 ... P0AEX9
    P10588
    40931005
    783221 8c5m:A (1.9) BS01 MTA 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0004483 ... P0DTD1 N/A
    783222 8c5m:B (1.9) BS01 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0003723 ... P0DTD1 N/A
    783223 8c5m:B (1.9) BS02 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0003723 ... P0DTD1 N/A
    783224 8c5o:A (2.3) BS01 4D6 ? GO:0005886 ... Q5HNZ7 N/A
    783225 8c5p:A (1.69) BS01 FMN 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36983061
    783226 8c5p:A (1.69) BS02 FMN 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36983061
    783227 8c5p:B (1.69) BS01 FMN 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36983061
    783228 8c5p:B (1.69) BS02 FMN 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36983061
    783229 8c5q:A (2.5) BS01 TL0 2.7.11.1 GO:0004672 ... P68400 38318383
    783230 8c5q:B (2.5) BS01 TL0 2.7.11.1 GO:0004672 ... P68400 38318383
    783231 8c5s:A (3.75) BS01 dna 2.7.7.6 GO:0001018 ... P13433 37821701
    783232 8c5s:A (3.75) BS02 dna 2.7.7.6 GO:0001018 ... P13433 37821701
    783233 8c5s:A (3.75) BS03 rna 2.7.7.6 GO:0001018 ... P13433 37821701
    783234 8c5s:B (3.75) BS01 dna 2.1.1.- GO:0005739 ... P14908 37821701
    783235 8c5s:B (3.75) BS02 dna 2.1.1.- GO:0005739 ... P14908 37821701
    783236 8c5u:A (3.62) BS01 dna 2.7.7.6 GO:0001018 ... P13433 37821701
    783237 8c5u:A (3.62) BS02 dna 2.7.7.6 GO:0001018 ... P13433 37821701
    783238 8c5u:A (3.62) BS03 rna 2.7.7.6 GO:0001018 ... P13433 37821701
    783239 8c5u:B (3.62) BS01 dna 2.1.1.- GO:0005739 ... P14908 37821701
    783240 8c5u:B (3.62) BS02 dna 2.1.1.- GO:0005739 ... P14908 37821701
    783241 8c5w:A (2.51) BS01 CEF ? GO:0005886 ... Q5HNZ7 N/A
    783242 8c5x:L (2.6) BS01 BCL ? GO:0009772 ... Q3J1A5 36837657
    783243 8c5x:L (2.6) BS02 BCL ? GO:0009772 ... Q3J1A5 36837657
    783244 8c5x:L (2.6) BS03 BPH ? GO:0009772 ... Q3J1A5 36837657
    783245 8c5x:L (2.6) BS04 U10 ? GO:0009772 ... Q3J1A5 36837657
    783246 8c5x:L (2.6) BS05 BCL ? GO:0009772 ... Q3J1A5 36837657
    783247 8c5x:L (2.6) BS06 BPH ? GO:0009772 ... Q3J1A5 36837657
    783248 8c5x:L (2.6) BS07 FE ? GO:0009772 ... Q3J1A5 36837657
    783249 8c5x:L (2.6) BS08 U10 ? GO:0009772 ... Q3J1A5 36837657
    783250 8c5x:M (2.6) BS01 BCL ? GO:0009772 ... Q3J1A6 36837657
    783251 8c5x:M (2.6) BS02 BPH ? GO:0009772 ... Q3J1A6 36837657
    783252 8c5x:M (2.6) BS03 BCL ? GO:0009772 ... Q3J1A6 36837657
    783253 8c5x:M (2.6) BS04 BCL ? GO:0009772 ... Q3J1A6 36837657
    783254 8c5x:M (2.6) BS05 BPH ? GO:0009772 ... Q3J1A6 36837657
    783255 8c5x:M (2.6) BS06 FE ? GO:0009772 ... Q3J1A6 36837657
    783256 8c5x:M (2.6) BS07 U10 ? GO:0009772 ... Q3J1A6 36837657
    783257 8c5x:M (2.6) BS08 SPN ? GO:0009772 ... Q3J1A6 36837657
    783258 8c5y:A (3.35) BS01 ZN ? N/A G8ZHS0 37087464
    783259 8c5y:D (3.35) BS01 ZN ? N/A G8ZHS0 37087464
    783260 8c5y:G (3.35) BS01 ZN ? N/A G8ZHS0 37087464
    783261 8c5y:J (3.35) BS01 ZN ? N/A G8ZHS0 37087464
    783262 8c5z:A (3.8) BS01 ZN ? GO:0000724 ... G8ZHS0 37087464
    783263 8c5z:D (3.8) BS01 ZN ? GO:0000724 ... G8ZHS0 37087464
    783264 8c5z:G (3.8) BS01 ZN ? GO:0000724 ... G8ZHS0 37087464
    783265 8c5z:J (3.8) BS01 ZN ? GO:0000724 ... G8ZHS0 37087464
    783266 8c60:B (3.4) BS01 ZN 3.5.1.-
    3.5.1.98
    GO:0000118 ... Q92769 37137925
    783267 8c60:B (3.4) BS02 CA 3.5.1.-
    3.5.1.98
    GO:0000118 ... Q92769 37137925
    783268 8c60:B (3.4) BS03 CA 3.5.1.-
    3.5.1.98
    GO:0000118 ... Q92769 37137925
    783269 8c60:C (3.4) BS01 ZN ? GO:0000122 ... Q96QT6 37137925
    783270 8c60:C (3.4) BS02 ZN ? GO:0000122 ... Q96QT6 37137925
    783271 8c60:C (3.4) BS03 ZN ? GO:0000122 ... Q96QT6 37137925
    783272 8c60:C (3.4) BS04 ZN ? GO:0000122 ... Q96QT6 37137925
    783273 8c61:A (2.5) BS01 ZN N/A GO:0004843 ... Q70EL1 39587316
    783274 8c61:A (2.5) BS02 ZN N/A GO:0004843 ... Q70EL1 39587316
    783275 8c61:A (2.5) BS03 ZN N/A GO:0004843 ... Q70EL1 39587316
    783276 8c61:A (2.5) BS04 AYE N/A GO:0004843 ... Q70EL1 39587316
    783277 8c61:D (2.5) BS01 ZN N/A GO:0004843 ... Q70EL1 39587316
    783278 8c61:D (2.5) BS02 ZN N/A GO:0004843 ... Q70EL1 39587316
    783279 8c61:D (2.5) BS03 ZN N/A GO:0004843 ... Q70EL1 39587316
    783280 8c61:D (2.5) BS04 AYE N/A GO:0004843 ... Q70EL1 39587316
    783281 8c61:G (2.5) BS01 ZN N/A GO:0004843 ... Q70EL1 39587316
    783282 8c61:G (2.5) BS02 ZN N/A GO:0004843 ... Q70EL1 39587316
    783283 8c61:G (2.5) BS03 ZN N/A GO:0004843 ... Q70EL1 39587316
    783284 8c61:G (2.5) BS04 AYE N/A GO:0004843 ... Q70EL1 39587316
    783285 8c61:J (2.5) BS01 ZN N/A GO:0004843 ... Q70EL1 39587316
    783286 8c61:J (2.5) BS02 ZN N/A GO:0004843 ... Q70EL1 39587316
    783287 8c61:J (2.5) BS03 ZN N/A GO:0004843 ... Q70EL1 39587316
    783288 8c61:J (2.5) BS04 AYE N/A GO:0004843 ... Q70EL1 39587316
    783289 8c69:A (1.9) BS01 FAD ? GO:0005634 ... Q8SXK5 38225270
    783290 8c6a:A (1.9) BS01 FAD ? GO:0005634 ... Q8SXK5 38225270
    783291 8c6b:A (1.9) BS01 FAD ? GO:0005634 ... Q8SXK5 38225270
    783292 8c6c:A (1.9) BS01 FAD ? GO:0005634 ... Q8SXK5 38225270
    783293 8c6d:A (2.4) BS01 SQS 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    N/A Q66479 36778240
    783294 8c6e:A (2.05) BS01 FE2 ? GO:0005549 ... Q8T6R7 37330089
    783295 8c6f:A (1.9) BS01 FAD ? GO:0005634 ... Q8SXK5 38225270
    783296 8c6h:A (1.9) BS01 FAD ? GO:0005634 ... Q8SXK5 38225270
    783297 8c6j:7 (2.8) BS01 rna 3.6.4.13 GO:0000184 ... P38919 36867703
    783298 8c6j:7 (2.8) BS02 MG 3.6.4.13 GO:0000184 ... P38919 36867703
    783299 8c6j:7 (2.8) BS03 ATP 3.6.4.13 GO:0000184 ... P38919 36867703
    783300 8c6j:A (2.8) BS01 rna ? GO:0000244 ... Q6P2Q9 36867703
    783301 8c6j:A (2.8) BS02 rna ? GO:0000244 ... Q6P2Q9 36867703
    783302 8c6j:A (2.8) BS03 rna ? GO:0000244 ... Q6P2Q9 36867703
    783303 8c6j:A (2.8) BS04 rna ? GO:0000244 ... Q6P2Q9 36867703
    783304 8c6j:A (2.8) BS05 rna ? GO:0000244 ... Q6P2Q9 36867703
    783305 8c6j:A (2.8) BS06 IHP ? GO:0000244 ... Q6P2Q9 36867703
    783306 8c6j:C (2.8) BS01 rna ? GO:0000244 ... Q15029 36867703
    783307 8c6j:C (2.8) BS02 GTP ? GO:0000244 ... Q15029 36867703
    783308 8c6j:D (2.8) BS01 rna ? GO:0000398 ... Q9H875 36867703
    783309 8c6j:D (2.8) BS02 rna ? GO:0000398 ... Q9H875 36867703
    783310 8c6j:F (2.8) BS01 rna ? GO:0000398 ... Q8WUQ7 36867703
    783311 8c6j:G (2.8) BS01 rna ? GO:0000398 ... Q9Y421 36867703
    783312 8c6j:J (2.8) BS01 rna ? GO:0000398 ... O43660 36867703
    783313 8c6j:K (2.8) BS01 rna ? GO:0000122 ... Q13573 36867703
    783314 8c6j:K (2.8) BS02 rna ? GO:0000122 ... Q13573 36867703
    783315 8c6j:L (2.8) BS01 rna ? GO:0000398 ... P41223 36867703
    783316 8c6j:L (2.8) BS02 ZN ? GO:0000398 ... P41223 36867703
    783317 8c6j:L (2.8) BS03 ZN ? GO:0000398 ... P41223 36867703
    783318 8c6j:L (2.8) BS04 ZN ? GO:0000398 ... P41223 36867703
    783319 8c6j:M (2.8) BS01 rna ? GO:0000398 ... Q9NW64 36867703
    783320 8c6j:M (2.8) BS02 rna ? GO:0000398 ... Q9NW64 36867703
    783321 8c6j:M (2.8) BS03 ZN ? GO:0000398 ... Q9NW64 36867703
    783322 8c6j:M (2.8) BS04 ZN ? GO:0000398 ... Q9NW64 36867703
    783323 8c6j:M (2.8) BS05 ZN ? GO:0000398 ... Q9NW64 36867703
    783324 8c6j:O (2.8) BS01 rna ? GO:0000077 ... Q99459 36867703
    783325 8c6j:O (2.8) BS02 rna ? GO:0000077 ... Q99459 36867703
    783326 8c6j:P (2.8) BS01 rna ? GO:0000398 ... Q9P013 36867703
    783327 8c6j:P (2.8) BS02 rna ? GO:0000398 ... Q9P013 36867703
    783328 8c6j:P (2.8) BS03 rna ? GO:0000398 ... Q9P013 36867703
    783329 8c6j:R (2.8) BS01 rna ? GO:0000398 ... Q9UQ35 36867703
    783330 8c6j:R (2.8) BS02 rna ? GO:0000398 ... Q9UQ35 36867703
    783331 8c6j:S (2.8) BS01 rna ? GO:0000398 ... Q9BZJ0 36867703
    783332 8c6j:V (2.8) BS01 rna 3.6.4.13 GO:0000398 ... Q14562 36867703
    783333 8c6j:Y (2.8) BS01 rna ? GO:0000387 ... P08579 36867703
    783334 8c6j:a (2.8) BS01 rna ? GO:0000244 ... P62316 36867703
    783335 8c6j:b (2.8) BS01 rna ? GO:0000244 ... P14678 36867703
    783336 8c6j:c (2.8) BS01 rna ? GO:0000243 ... P62314 36867703
    783337 8c6j:d (2.8) BS01 rna ? GO:0000243 ... P62318 36867703
    783338 8c6j:e (2.8) BS01 rna ? GO:0000244 ... P62304 36867703
    783339 8c6j:f (2.8) BS01 rna ? GO:0000244 ... P62306 36867703
    783340 8c6j:g (2.8) BS01 rna ? GO:0000244 ... P62308 36867703
    783341 8c6j:h (2.8) BS01 rna ? GO:0000375 ... O95391 36867703
    783342 8c6j:h (2.8) BS02 IHP ? GO:0000375 ... O95391 36867703
    783343 8c6j:l (2.8) BS01 rna ? GO:0000243 ... P62314 36867703
    783344 8c6j:m (2.8) BS01 rna ? GO:0000244 ... P62316 36867703
    783345 8c6j:n (2.8) BS01 rna ? GO:0000243 ... P62318 36867703
    783346 8c6j:o (2.8) BS01 rna ? GO:0000398 ... O60508 36867703
    783347 8c6j:o (2.8) BS02 rna ? GO:0000398 ... O60508 36867703
    783348 8c6j:o (2.8) BS03 rna ? GO:0000398 ... O60508 36867703
    783349 8c6j:p (2.8) BS01 rna ? GO:0000244 ... P62304 36867703
    783350 8c6j:q (2.8) BS01 rna ? GO:0000244 ... P62306 36867703
    783351 8c6j:r (2.8) BS01 rna ? GO:0000244 ... P62308 36867703
    783352 8c6j:y (2.8) BS01 rna ? GO:0000398 ... O95926 36867703
    783353 8c6j:y (2.8) BS02 rna ? GO:0000398 ... O95926 36867703
    783354 8c6j:z (2.8) BS01 rna ? GO:0000479 ... Q6IQ49 36867703
    783355 8c6k:L (2.86) BS01 BCL ? GO:0009772 ... Q3J1A5 36837657
    783356 8c6k:L (2.86) BS02 BCL ? GO:0009772 ... Q3J1A5 36837657
    783357 8c6k:L (2.86) BS03 BPH ? GO:0009772 ... Q3J1A5 36837657
    783358 8c6k:L (2.86) BS04 U10 ? GO:0009772 ... Q3J1A5 36837657
    783359 8c6k:L (2.86) BS05 BCL ? GO:0009772 ... Q3J1A5 36837657
    783360 8c6k:L (2.86) BS06 BPH ? GO:0009772 ... Q3J1A5 36837657
    783361 8c6k:L (2.86) BS07 FE ? GO:0009772 ... Q3J1A5 36837657
    783362 8c6k:L (2.86) BS08 U10 ? GO:0009772 ... Q3J1A5 36837657
    783363 8c6k:M (2.86) BS01 BCL ? GO:0009772 ... Q3J1A6 36837657
    783364 8c6k:M (2.86) BS02 BPH ? GO:0009772 ... Q3J1A6 36837657
    783365 8c6k:M (2.86) BS03 BCL ? GO:0009772 ... Q3J1A6 36837657
    783366 8c6k:M (2.86) BS04 BCL ? GO:0009772 ... Q3J1A6 36837657
    783367 8c6k:M (2.86) BS05 BPH ? GO:0009772 ... Q3J1A6 36837657
    783368 8c6k:M (2.86) BS06 FE ? GO:0009772 ... Q3J1A6 36837657
    783369 8c6k:M (2.86) BS07 U10 ? GO:0009772 ... Q3J1A6 36837657
    783370 8c6k:M (2.86) BS08 SPN ? GO:0009772 ... Q3J1A6 36837657
    783371 8c6l:A (1.8) BS01 TO6 2.7.11.1 GO:0004672 ... P68400 N/A
    783372 8c6m:A (1.8) BS01 TNO 2.7.11.1 GO:0004672 ... P68400 N/A
    783373 8c6n:A (2.05) BS01 TN0 2.7.11.1 GO:0004672 ... P68400 N/A
    783374 8c6o:A (2.2) BS01 CZH ? GO:0005509 ... Q27709 37047842
    783375 8c6o:B (2.2) BS01 CZH ? GO:0005509 ... Q27709 37047842
    783376 8c6p:A (1.1) BS01 TT6 3.4.23.22 GO:0004190 ... P11838 37130057
    783377 8c6q:A (1.25) BS01 TU5 3.4.23.22 GO:0004190 ... P11838 37130057
    783378 8c6s:A (1.1) BS01 TUU 3.4.23.22 GO:0004190 ... P11838 37130057
    783379 8c6t:A (1.15) BS01 TV6 3.4.23.22 GO:0004190 ... P11838 37130057
    783380 8c6t:A (1.15) BS02 TV6 3.4.23.22 GO:0004190 ... P11838 37130057
    783381 8c6v:D (2.15) BS01 ZN N/A N/A A0A076V8I4 39571786
    783382 8c6z:A (1.85) BS01 CO ? GO:0005975 ... F8UNI4 39283899
    783383 8c6z:A (1.85) BS02 DW0 ? GO:0005975 ... F8UNI4 39283899
    783384 8c6z:A (1.85) BS03 DW0 ? GO:0005975 ... F8UNI4 39283899
    783385 8c70:A (1.65) BS01 TVI 3.4.23.22 GO:0004190 ... P11838 37130057
    783386 8c71:A (1.1) BS01 TVO 3.4.23.22 GO:0004190 ... P11838 37130057
    783387 8c72:A (1.2) BS01 TW0 3.4.23.22 GO:0004190 ... P11838 37130057
    783388 8c72:A (1.2) BS02 TW0 3.4.23.22 GO:0004190 ... P11838 37130057
    783389 8c73:A (1.7) BS01 B12 ? GO:0031419 ... Q53W62 37604813
    783390 8c73:B (1.7) BS01 B12 ? GO:0031419 ... Q53W62 37604813
    783391 8c73:C (1.7) BS01 B12 ? GO:0031419 ... Q53W62 37604813
    783392 8c73:D (1.7) BS01 B12 ? GO:0031419 ... Q53W62 37604813
    783393 8c74:A (1.15) BS01 TWX 3.4.23.22 GO:0004190 ... P11838 37130057
    783394 8c74:A (1.15) BS02 TWX 3.4.23.22 GO:0004190 ... P11838 37130057
    783395 8c76:A (2.5) BS01 B12 ? GO:0031419 ... Q53W62 37604813
    783396 8c76:B (2.5) BS01 B12 ? GO:0031419 ... Q53W62 37604813
    783397 8c76:C (2.5) BS01 B12 ? GO:0031419 ... Q53W62 37604813
    783398 8c76:D (2.5) BS01 B12 ? GO:0031419 ... Q53W62 37604813
    783399 8c77:A (1.7) BS01 TXH 3.4.22.15 GO:0006508 ... P07711 38630165
    783400 8c77:B (1.7) BS01 TXH 3.4.22.15 GO:0006508 ... P07711 38630165

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
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