SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    783601 8cmo:B (2.81) BS22 CLA N/A GO:0009522 ... N/A N/A
    783602 8cmo:B (2.81) BS23 CLA N/A GO:0009522 ... N/A N/A
    783603 8cmo:B (2.81) BS24 CLA N/A GO:0009522 ... N/A N/A
    783604 8cmo:B (2.81) BS25 CLA N/A GO:0009522 ... N/A N/A
    783605 8cmo:B (2.81) BS26 CLA N/A GO:0009522 ... N/A N/A
    783606 8cmo:B (2.81) BS27 CLA N/A GO:0009522 ... N/A N/A
    783607 8cmo:B (2.81) BS28 CLA N/A GO:0009522 ... N/A N/A
    783608 8cmo:B (2.81) BS29 CLA N/A GO:0009522 ... N/A N/A
    783609 8cmo:B (2.81) BS30 CLA N/A GO:0009522 ... N/A N/A
    783610 8cmo:B (2.81) BS31 CLA N/A GO:0009522 ... N/A N/A
    783611 8cmo:B (2.81) BS32 CLA N/A GO:0009522 ... N/A N/A
    783612 8cmo:B (2.81) BS33 CLA N/A GO:0009522 ... N/A N/A
    783613 8cmo:B (2.81) BS34 CLA N/A GO:0009522 ... N/A N/A
    783614 8cmo:B (2.81) BS35 CLA N/A GO:0009522 ... N/A N/A
    783615 8cmo:B (2.81) BS36 CLA N/A GO:0009522 ... N/A N/A
    783616 8cmo:B (2.81) BS37 CLA N/A GO:0009522 ... N/A N/A
    783617 8cmo:B (2.81) BS38 CLA N/A GO:0009522 ... N/A N/A
    783618 8cmo:B (2.81) BS39 CLA N/A GO:0009522 ... N/A N/A
    783619 8cmo:B (2.81) BS40 CLA N/A GO:0009522 ... N/A N/A
    783620 8cmo:B (2.81) BS41 CLA N/A GO:0009522 ... N/A N/A
    783621 8cmo:B (2.81) BS42 CLA N/A GO:0009522 ... N/A N/A
    783622 8cmo:B (2.81) BS43 CLA N/A GO:0009522 ... N/A N/A
    783623 8cmo:B (2.81) BS44 CLA N/A GO:0009522 ... N/A N/A
    783624 8cmo:B (2.81) BS45 CLA N/A GO:0009522 ... N/A N/A
    783625 8cmo:B (2.81) BS46 CLA N/A GO:0009522 ... N/A N/A
    783626 8cmo:B (2.81) BS47 CLA N/A GO:0009522 ... N/A N/A
    783627 8cmo:B (2.81) BS48 PQN N/A GO:0009522 ... N/A N/A
    783628 8cmo:B (2.81) BS49 CLA N/A GO:0009522 ... N/A N/A
    783629 8cmo:B (2.81) BS50 CLA N/A GO:0009522 ... N/A N/A
    783630 8cmo:B (2.81) BS51 T7X N/A GO:0009522 ... N/A N/A
    783631 8cmo:B (2.81) BS52 CLA N/A GO:0009522 ... N/A N/A
    783632 8cmo:B (2.81) BS53 CLA N/A GO:0009522 ... N/A N/A
    783633 8cmo:C (2.81) BS01 SF4 N/A GO:0009055 ... N/A N/A
    783634 8cmo:C (2.81) BS02 SF4 N/A GO:0009055 ... N/A N/A
    783635 8cmo:F (2.81) BS01 CLA N/A GO:0009522 ... N/A N/A
    783636 8cmo:F (2.81) BS02 CLA N/A GO:0009522 ... N/A N/A
    783637 8cmo:F (2.81) BS03 CLA N/A GO:0009522 ... N/A N/A
    783638 8cmo:F (2.81) BS04 CLA N/A GO:0009522 ... N/A N/A
    783639 8cmo:F (2.81) BS05 CLA N/A GO:0009522 ... N/A N/A
    783640 8cmo:F (2.81) BS06 RRX N/A GO:0009522 ... N/A N/A
    783641 8cmo:F (2.81) BS07 T7X N/A GO:0009522 ... N/A N/A
    783642 8cmo:F (2.81) BS08 CLA N/A GO:0009522 ... N/A N/A
    783643 8cmo:G (2.81) BS01 CLA N/A GO:0009522 ... N/A N/A
    783644 8cmo:G (2.81) BS02 CLA N/A GO:0009522 ... N/A N/A
    783645 8cmo:G (2.81) BS03 CLA N/A GO:0009522 ... N/A N/A
    783646 8cmo:G (2.81) BS04 CLA N/A GO:0009522 ... N/A N/A
    783647 8cmo:G (2.81) BS05 CLA N/A GO:0009522 ... N/A N/A
    783648 8cmo:G (2.81) BS06 CLA N/A GO:0009522 ... N/A N/A
    783649 8cmo:I (2.81) BS01 CLA N/A GO:0009522 ... N/A N/A
    783650 8cmo:I (2.81) BS02 CLA N/A GO:0009522 ... N/A N/A
    783651 8cmo:I (2.81) BS03 CLA N/A GO:0009522 ... N/A N/A
    783652 8cmo:J (2.81) BS01 CLA N/A GO:0009522 ... N/A N/A
    783653 8cmo:J (2.81) BS02 CLA N/A GO:0009522 ... N/A N/A
    783654 8cmo:J (2.81) BS03 CLA N/A GO:0009522 ... N/A N/A
    783655 8cmo:J (2.81) BS04 CLA N/A GO:0009522 ... N/A N/A
    783656 8cmo:J (2.81) BS05 T7X N/A GO:0009522 ... N/A N/A
    783657 8cmo:J (2.81) BS06 CLA N/A GO:0009522 ... N/A N/A
    783658 8cmo:J (2.81) BS07 C7Z N/A GO:0009522 ... N/A N/A
    783659 8cmo:K (2.81) BS01 CLA N/A GO:0009522 ... N/A N/A
    783660 8cmo:K (2.81) BS02 CLA N/A GO:0009522 ... N/A N/A
    783661 8cmo:K (2.81) BS03 CLA N/A GO:0009522 ... N/A N/A
    783662 8cmo:K (2.81) BS04 CLA N/A GO:0009522 ... N/A N/A
    783663 8cmo:K (2.81) BS05 CLA N/A GO:0009522 ... N/A N/A
    783664 8cmo:K (2.81) BS06 CLA N/A GO:0009522 ... N/A N/A
    783665 8cmo:K (2.81) BS07 CLA N/A GO:0009522 ... N/A N/A
    783666 8cmo:L (2.81) BS01 CLA N/A GO:0009522 ... N/A N/A
    783667 8cmo:L (2.81) BS02 CLA N/A GO:0009522 ... N/A N/A
    783668 8cmo:L (2.81) BS03 CLA N/A GO:0009522 ... N/A N/A
    783669 8cmo:L (2.81) BS04 CLA N/A GO:0009522 ... N/A N/A
    783670 8cmo:L (2.81) BS05 CLA N/A GO:0009522 ... N/A N/A
    783671 8cmo:L (2.81) BS06 CLA N/A GO:0009522 ... N/A N/A
    783672 8cmo:Z (2.81) BS01 CLA N/A GO:0009765 ... N/A N/A
    783673 8cmo:Z (2.81) BS02 CLA N/A GO:0009765 ... N/A N/A
    783674 8cmo:Z (2.81) BS03 CLA N/A GO:0009765 ... N/A N/A
    783675 8cmo:Z (2.81) BS04 CLA N/A GO:0009765 ... N/A N/A
    783676 8cmo:Z (2.81) BS05 CLA N/A GO:0009765 ... N/A N/A
    783677 8cmo:Z (2.81) BS06 CLA N/A GO:0009765 ... N/A N/A
    783678 8cmo:Z (2.81) BS07 CLA N/A GO:0009765 ... N/A N/A
    783679 8cmo:Z (2.81) BS08 CLA N/A GO:0009765 ... N/A N/A
    783680 8cmo:Z (2.81) BS09 CHL N/A GO:0009765 ... N/A N/A
    783681 8cmo:Z (2.81) BS10 CHL N/A GO:0009765 ... N/A N/A
    783682 8cmo:Z (2.81) BS11 CLA N/A GO:0009765 ... N/A N/A
    783683 8cmo:Z (2.81) BS12 CLA N/A GO:0009765 ... N/A N/A
    783684 8cmo:Z (2.81) BS13 CLA N/A GO:0009765 ... N/A N/A
    783685 8cmo:Z (2.81) BS14 CLA N/A GO:0009765 ... N/A N/A
    783686 8cms:AAA (1.77) BS01 V2X 3.4.19.12 GO:0004843 ... Q96DC9 37642399
    783687 8cmw:A (2.6) BS01 peptide N/A GO:0003824 ... N/A 38743001
    783688 8cmw:A (2.6) BS02 RQM N/A GO:0003824 ... N/A 38743001
    783689 8cmw:A (2.6) BS03 FES N/A GO:0003824 ... N/A 38743001
    783690 8cmw:A (2.6) BS04 SF4 N/A GO:0003824 ... N/A 38743001
    783691 8cmw:B (2.6) BS01 SF4 2.3.1.169 GO:0003824 ... Q3ACS4 38743001
    783692 8cmy:C (3.79) BS01 CAP 4.1.1.39 GO:0000287 ... A5CKD0 37015227
    783693 8cmy:G (3.79) BS01 CAP 4.1.1.39 GO:0000287 ... A5CKD0 37015227
    783694 8cmy:I (3.79) BS01 CAP 4.1.1.39 GO:0000287 ... A5CKD0 37015227
    783695 8cmy:K (3.79) BS01 CAP 4.1.1.39 GO:0000287 ... A5CKD0 37015227
    783696 8cmy:M (3.79) BS01 CAP 4.1.1.39 GO:0000287 ... A5CKD0 37015227
    783697 8cmy:M (3.79) BS02 CAP 4.1.1.39 GO:0000287 ... A5CKD0 37015227
    783698 8cmy:O (3.79) BS01 CAP 4.1.1.39 GO:0000287 ... A5CKD0 37015227
    783699 8cmz:A (2.252) BS01 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 N/A
    783700 8cmz:A (2.252) BS02 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 N/A
    783701 8cmz:A (2.252) BS03 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 N/A
    783702 8cmz:A (2.252) BS04 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 N/A
    783703 8cmz:A (2.252) BS05 COA 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 N/A
    783704 8cn0:A (2.44) BS01 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 N/A
    783705 8cn0:A (2.44) BS02 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 N/A
    783706 8cn0:A (2.44) BS03 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 N/A
    783707 8cn0:A (2.44) BS04 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 N/A
    783708 8cn0:A (2.44) BS05 COA 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 N/A
    783709 8cn1:A (2.09) BS01 peptide ? N/A Q12959 37481039
    783710 8cn1:B (2.09) BS01 peptide ? N/A Q12959 37481039
    783711 8cn1:B (2.09) BS02 peptide ? N/A Q12959 37481039
    783712 8cn1:C (2.09) BS01 peptide ? N/A Q12959 37481039
    783713 8cn1:D (2.09) BS01 peptide ? N/A Q12959 37481039
    783714 8cn1:E (2.09) BS01 peptide ? N/A Q12959 37481039
    783715 8cn1:F (2.09) BS01 peptide ? N/A Q12959 37481039
    783716 8cn1:G (2.09) BS01 peptide ? N/A Q12959 37481039
    783717 8cn1:H (2.09) BS01 peptide ? N/A Q12959 37481039
    783718 8cn1:I (2.09) BS01 peptide ? N/A Q12959 37481039
    783719 8cn1:J (2.09) BS01 peptide ? N/A Q12959 37481039
    783720 8cn1:K (2.09) BS01 peptide ? N/A Q12959 37481039
    783721 8cn1:L (2.09) BS01 peptide ? N/A Q12959 37481039
    783722 8cn2:A (1.88) BS01 V60 2.3.1.179 GO:0004315 ... G3XDA2 N/A
    783723 8cn2:B (1.88) BS01 V60 2.3.1.179 GO:0004315 ... G3XDA2 N/A
    783724 8cn3:A (2.71) BS01 peptide ? N/A Q12959 37481039
    783725 8cn3:B (2.71) BS01 peptide ? N/A Q12959 37481039
    783726 8cn4:A (1.67) BS01 MG 2.3.1.179 GO:0004315 ... G3XDA2 N/A
    783727 8cn4:B (1.67) BS01 V5R 2.3.1.179 GO:0004315 ... G3XDA2 N/A
    783728 8cn5:A (1.93) BS01 V5K 2.3.1.179 GO:0004315 ... G3XDA2 N/A
    783729 8cn5:B (1.93) BS01 V5K 2.3.1.179 GO:0004315 ... G3XDA2 N/A
    783730 8cn6:A (2.43) BS01 peptide N/A N/A P13987 N/A
    783731 8cn6:B (2.43) BS01 peptide N/A N/A P13987 N/A
    783732 8cn6:C (2.43) BS01 peptide N/A N/A P13987 N/A
    783733 8cn6:C (2.43) BS02 ZN N/A N/A P13987 N/A
    783734 8cn6:D (2.43) BS01 peptide N/A N/A P13987 N/A
    783735 8cn6:E (2.43) BS01 peptide N/A N/A P13987 N/A
    783736 8cn6:F (2.43) BS01 peptide N/A N/A P13987 N/A
    783737 8cn6:F (2.43) BS02 ZN N/A N/A P13987 N/A
    783738 8cn7:A (2.1) BS01 N32 2.3.1.179 GO:0004315 ... G3XDA2 N/A
    783739 8cn7:B (2.1) BS01 N32 2.3.1.179 GO:0004315 ... G3XDA2 N/A
    783740 8cn9:A (3.4) BS01 CA N/A N/A N/A 39196196
    783741 8cn9:C (3.4) BS01 CA 3.4.21.21 GO:0004252 ... P08709 39196196
    783742 8cn9:D (3.4) BS01 BGC 3.4.21.21 GO:0005509 ... P08709 39196196
    783743 8cn9:H (3.4) BS01 CA 3.4.21.21 GO:0004252 ... P08709 39196196
    783744 8cn9:H (3.4) BS02 CA 3.4.21.21 GO:0004252 ... P08709 39196196
    783745 8cn9:I (3.4) BS01 BGC 3.4.21.21 GO:0005509 ... P08709 39196196
    783746 8cn9:K (3.4) BS01 CA N/A N/A N/A 39196196
    783747 8cn9:M (3.4) BS01 CA 3.4.21.21 GO:0004252 ... P08709 39196196
    783748 8cn9:M (3.4) BS02 CA 3.4.21.21 GO:0004252 ... P08709 39196196
    783749 8cn9:R (3.4) BS01 CA 3.4.21.21 GO:0004252 ... P08709 39196196
    783750 8cn9:R (3.4) BS02 CA 3.4.21.21 GO:0004252 ... P08709 39196196
    783751 8cn9:S (3.4) BS01 BGC 3.4.21.21 GO:0005509 ... P08709 39196196
    783752 8cna:A (2.463) BS01 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 N/A
    783753 8cna:A (2.463) BS02 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 N/A
    783754 8cna:A (2.463) BS03 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 N/A
    783755 8cna:A (2.463) BS04 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 N/A
    783756 8cna:A (2.463) BS05 01K 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 N/A
    783757 8cnb:A (1.986) BS01 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 N/A
    783758 8cnb:A (1.986) BS02 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 N/A
    783759 8cnb:A (1.986) BS03 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 N/A
    783760 8cnb:A (1.986) BS04 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 N/A
    783761 8cnb:A (1.986) BS05 COA 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 N/A
    783762 8cnc:A (1.46) BS01 6D6 2.1.1.- GO:0003676 ... Q9Y5N5 N/A
    783763 8cnd:A (2.972) BS01 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 N/A
    783764 8cnd:A (2.972) BS02 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 N/A
    783765 8cnd:A (2.972) BS03 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 N/A
    783766 8cnd:A (2.972) BS04 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 N/A
    783767 8cnd:A (2.972) BS05 01K 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 N/A
    783768 8cnd:A (2.972) BS06 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... P45481 N/A
    783769 8cne:A (1.57) BS01 Q5L 2.3.1.179 GO:0004315 ... G3XDA2 N/A
    783770 8cne:B (1.57) BS01 Q5L 2.3.1.179 GO:0004315 ... G3XDA2 N/A
    783771 8cnf:A (0.95) BS01 NAP 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 N/A
    783772 8cnf:A (0.95) BS02 30L 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 N/A
    783773 8cng:A (2.1) BS01 MG 2.3.1.179 GO:0004315 ... G3XDA2 N/A
    783774 8cng:B (2.1) BS01 V6L 2.3.1.179 GO:0004315 ... G3XDA2 N/A
    783775 8cnh:A (2.0) BS01 V6U 4.6.1.1 GO:0009190 ... Q96PN6 37060320
    783776 8cnj:A (1.35) BS01 GDP 3.6.5.2 GO:0003924 ... P01112 38297137
    783777 8cnj:A (1.35) BS02 BEF 3.6.5.2 GO:0003924 ... P01112 38297137
    783778 8cnj:A (1.35) BS03 MG 3.6.5.2 GO:0003924 ... P01112 38297137
    783779 8cnj:B (1.35) BS01 GDP 3.6.5.2 GO:0003924 ... P01112 38297137
    783780 8cnj:B (1.35) BS02 BEF 3.6.5.2 GO:0003924 ... P01112 38297137
    783781 8cnj:B (1.35) BS03 MG 3.6.5.2 GO:0003924 ... P01112 38297137
    783782 8cnl:A (2.8) BS01 ZN N/A N/A P09992 N/A
    783783 8cnl:B (2.8) BS01 ZN N/A N/A P09992 N/A
    783784 8cnl:C (2.8) BS01 ZN N/A N/A P09992 N/A
    783785 8cnl:D (2.8) BS01 ZN N/A N/A P09992 N/A
    783786 8cnl:E (2.8) BS01 ZN N/A N/A P09992 N/A
    783787 8cnl:F (2.8) BS01 ZN N/A N/A P09992 N/A
    783788 8cnl:G (2.8) BS01 ZN N/A N/A P09992 N/A
    783789 8cnl:H (2.8) BS01 ZN N/A N/A P09992 N/A
    783790 8cnm:A (1.88) BS01 AR6 2.3.1.-
    2.3.1.286
    2.4.2.-
    GO:0070403 ... Q8N6T7 N/A
    783791 8cnm:A (1.88) BS02 ZN 2.3.1.-
    2.3.1.286
    2.4.2.-
    GO:0070403 ... Q8N6T7 N/A
    783792 8cnm:A (1.88) BS03 V7R 2.3.1.-
    2.3.1.286
    2.4.2.-
    GO:0070403 ... Q8N6T7 N/A
    783793 8cnm:B (1.88) BS01 AR6 2.3.1.-
    2.3.1.286
    2.4.2.-
    GO:0070403 ... Q8N6T7 N/A
    783794 8cnm:B (1.88) BS02 ZN 2.3.1.-
    2.3.1.286
    2.4.2.-
    GO:0070403 ... Q8N6T7 N/A
    783795 8cnm:B (1.88) BS03 V7R 2.3.1.-
    2.3.1.286
    2.4.2.-
    GO:0070403 ... Q8N6T7 N/A
    783796 8cnn:A (1.48) BS01 GDP 3.6.5.2 GO:0003924 ... P01112 38297137
    783797 8cnn:A (1.48) BS02 BEF 3.6.5.2 GO:0003924 ... P01112 38297137
    783798 8cnn:A (1.48) BS03 MG 3.6.5.2 GO:0003924 ... P01112 38297137
    783799 8cno:A (1.75) BS01 AR6 2.3.1.-
    2.3.1.286
    2.4.2.-
    GO:0070403 ... Q8N6T7 N/A
    783800 8cno:A (1.75) BS02 ZN 2.3.1.-
    2.3.1.286
    2.4.2.-
    GO:0070403 ... Q8N6T7 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).