SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    784401 8cqm:A (2.0) BS03 FE 3.1.4.3 GO:0004629 ... P33378 37838694
    784402 8cqm:B (2.0) BS01 FE 3.1.4.3 GO:0004629 ... P33378 37838694
    784403 8cqm:B (2.0) BS02 FE 3.1.4.3 GO:0004629 ... P33378 37838694
    784404 8cqp:C (1.7) BS01 CA N/A GO:0006396 ... N/A 38591647
    784405 8cqq:A (2.6) BS01 CU N/A GO:0006396 ... N/A 38591647
    784406 8cqs:A (1.7) BS01 FMN ? GO:0000166 ... Q8AB93 N/A
    784407 8cqs:A (1.7) BS02 FMN ? GO:0000166 ... Q8AB93 N/A
    784408 8cqs:B (1.7) BS01 FMN ? GO:0000166 ... Q8AB93 N/A
    784409 8cqs:B (1.7) BS02 FMN ? GO:0000166 ... Q8AB93 N/A
    784410 8cqt:A (2.2) BS01 FMN ? GO:0000166 ... Q8A858 N/A
    784411 8cqt:A (2.2) BS02 FMN ? GO:0000166 ... Q8A858 N/A
    784412 8cqt:B (2.2) BS01 FMN ? GO:0000166 ... Q8A858 N/A
    784413 8cqt:B (2.2) BS02 FMN ? GO:0000166 ... Q8A858 N/A
    784414 8cqv:A (1.7) BS01 FMN ? GO:0000166 ... Q8A2B3 N/A
    784415 8cqv:A (1.7) BS02 FMN ? GO:0000166 ... Q8A2B3 N/A
    784416 8cqv:B (1.7) BS01 FMN ? GO:0000166 ... Q8A2B3 N/A
    784417 8cqv:B (1.7) BS02 FMN ? GO:0000166 ... Q8A2B3 N/A
    784418 8cqw:0 (3.05) BS01 rna N/A GO:0003735 ... A0A8H6BZJ3 N/A
    784419 8cqw:0 (3.05) BS02 rna N/A GO:0003735 ... A0A8H6BZJ3 N/A
    784420 8cqw:12 (3.05) BS01 rna N/A GO:0003735 ... A0A8H6C5X8 N/A
    784421 8cqw:2 (3.05) BS01 rna N/A GO:0003735 ... A0A8H6F1C8 N/A
    784422 8cqw:2 (3.05) BS02 rna N/A GO:0003735 ... A0A8H6F1C8 N/A
    784423 8cqw:2 (3.05) BS03 MG N/A GO:0003735 ... A0A8H6F1C8 N/A
    784424 8cqw:5 (3.05) BS01 rna N/A GO:0002181 ... A0A1D8PM41 N/A
    784425 8cqw:6 (3.05) BS01 rna N/A GO:0003735 ... A0A8H6C444 N/A
    784426 8cqw:7 (3.05) BS01 rna N/A GO:0002181 ... A0A8H6C4U1 N/A
    784427 8cqw:7 (3.05) BS02 rna N/A GO:0002181 ... A0A8H6C4U1 N/A
    784428 8cqw:8 (3.05) BS01 rna N/A GO:0003735 ... A0A8H6F6A1 N/A
    784429 8cqw:8 (3.05) BS02 rna N/A GO:0003735 ... A0A8H6F6A1 N/A
    784430 8cqw:9 (3.05) BS01 rna N/A GO:0003723 ... A0A8H6F3X2 N/A
    784431 8cqw:9 (3.05) BS02 rna N/A GO:0003723 ... A0A8H6F3X2 N/A
    784432 8cqw:AA (3.05) BS01 rna N/A GO:0003735 ... Q9P843 N/A
    784433 8cqw:AB (3.05) BS01 rna N/A GO:0003723 ... A0A8H6BVY8 N/A
    784434 8cqw:AB (3.05) BS02 MG N/A GO:0003723 ... A0A8H6BVY8 N/A
    784435 8cqw:AC (3.05) BS01 rna N/A GO:0002181 ... A0A8H6F0G8 N/A
    784436 8cqw:AD (3.05) BS01 rna N/A GO:0003723 ... A0A1D8PM75 N/A
    784437 8cqw:AE (3.05) BS01 rna N/A GO:0002181 ... A0A8H6F1M1 N/A
    784438 8cqw:AE (3.05) BS02 MG N/A GO:0002181 ... A0A8H6F1M1 N/A
    784439 8cqw:AF (3.05) BS01 rna N/A GO:0003735 ... O94008 N/A
    784440 8cqw:AF (3.05) BS02 MG N/A GO:0003735 ... O94008 N/A
    784441 8cqw:AG (3.05) BS01 rna N/A GO:0003735 ... A0A8H6BW57 N/A
    784442 8cqw:AG (3.05) BS02 MG N/A GO:0003735 ... A0A8H6BW57 N/A
    784443 8cqw:AG (3.05) BS03 MG N/A GO:0003735 ... A0A8H6BW57 N/A
    784444 8cqw:AH (3.05) BS01 rna N/A GO:0003735 ... A0A8H6F171 N/A
    784445 8cqw:AH (3.05) BS02 ZN N/A GO:0003735 ... A0A8H6F171 N/A
    784446 8cqw:AH (3.05) BS03 MG N/A GO:0003735 ... A0A8H6F171 N/A
    784447 8cqw:AI (3.05) BS01 rna N/A GO:0000463 ... A0A8H6F6B7 N/A
    784448 8cqw:AI (3.05) BS02 rna N/A GO:0000463 ... A0A8H6F6B7 N/A
    784449 8cqw:AJ (3.05) BS01 rna N/A GO:0003735 ... P47834 N/A
    784450 8cqw:AK (3.05) BS01 rna N/A GO:0003723 ... A0A1D8PF45 N/A
    784451 8cqw:AK (3.05) BS02 rna N/A GO:0003723 ... A0A1D8PF45 N/A
    784452 8cqw:AK (3.05) BS03 ZN N/A GO:0003723 ... A0A1D8PF45 N/A
    784453 8cqw:AL (3.05) BS01 rna N/A GO:0003735 ... A0A1D8PG16 N/A
    784454 8cqw:AM (3.05) BS01 rna N/A GO:0003735 ... Q96W55 N/A
    784455 8cqw:AM (3.05) BS02 rna N/A GO:0003735 ... Q96W55 N/A
    784456 8cqw:AM (3.05) BS03 MG N/A GO:0003735 ... Q96W55 N/A
    784457 8cqw:AN (3.05) BS01 rna N/A GO:0003735 ... A0A1D8PL68 N/A
    784458 8cqw:AN (3.05) BS02 ZN N/A GO:0003735 ... A0A1D8PL68 N/A
    784459 8cqw:AP (3.05) BS01 rna N/A GO:0003735 ... A0A8H6BR69 N/A
    784460 8cqw:AP (3.05) BS02 3K5 N/A GO:0003735 ... A0A8H6BR69 N/A
    784461 8cqw:AP (3.05) BS03 ZN N/A GO:0003735 ... A0A8H6BR69 N/A
    784462 8cqw:AP (3.05) BS04 MG N/A GO:0003735 ... A0A8H6BR69 N/A
    784463 8cqw:AQ (3.05) BS01 rna N/A GO:0003735 ... A0A1D8PP14 N/A
    784464 8cqw:AQ (3.05) BS02 ZN N/A GO:0003735 ... A0A1D8PP14 N/A
    784465 8cqw:AR (3.05) BS01 rna N/A GO:0001965 ... A0A8H6C3E7 N/A
    784466 8cqw:AR (3.05) BS02 MG N/A GO:0001965 ... A0A8H6C3E7 N/A
    784467 8cqw:AW (3.05) BS01 rna N/A GO:0002181 ... A0A8H6F1X9 N/A
    784468 8cqw:AW (3.05) BS02 MG N/A GO:0002181 ... A0A8H6F1X9 N/A
    784469 8cqw:AW (3.05) BS03 MG N/A GO:0002181 ... A0A8H6F1X9 N/A
    784470 8cqw:AX (3.05) BS01 rna N/A GO:0000027 ... Q59LS1 N/A
    784471 8cqw:AY (3.05) BS01 rna N/A GO:0003735 ... A0A8H6F4H4 N/A
    784472 8cqw:AY (3.05) BS02 rna N/A GO:0003735 ... A0A8H6F4H4 N/A
    784473 8cqw:AZ (3.05) BS01 rna N/A GO:0000027 ... G1UAA6 N/A
    784474 8cqw:AZ (3.05) BS02 rna N/A GO:0000027 ... G1UAA6 N/A
    784475 8cqw:AZ (3.05) BS03 MG N/A GO:0000027 ... G1UAA6 N/A
    784476 8cqw:BA (3.05) BS01 rna N/A GO:0000027 ... Q9P834 N/A
    784477 8cqw:BB (3.05) BS01 rna N/A GO:0000463 ... A0A8H6BVN2 N/A
    784478 8cqw:BB (3.05) BS02 rna N/A GO:0000463 ... A0A8H6BVN2 N/A
    784479 8cqw:BC (3.05) BS01 rna N/A GO:0003723 ... A0A8H6C337 N/A
    784480 8cqw:BC (3.05) BS02 rna N/A GO:0003723 ... A0A8H6C337 N/A
    784481 8cqw:BD (3.05) BS01 rna N/A GO:0002181 ... A0A8H6C3N3 N/A
    784482 8cqw:BE (3.05) BS01 rna N/A GO:0003735 ... Q5AIB8 N/A
    784483 8cqw:BE (3.05) BS02 rna N/A GO:0003735 ... Q5AIB8 N/A
    784484 8cqw:BE (3.05) BS03 MG N/A GO:0003735 ... Q5AIB8 N/A
    784485 8cqw:BF (3.05) BS01 rna N/A GO:0003735 ... A0A8H6F1S5 N/A
    784486 8cqw:BF (3.05) BS02 rna N/A GO:0003735 ... A0A8H6F1S5 N/A
    784487 8cqw:BG (3.05) BS01 rna N/A GO:0003723 ... A0A8H6F5V7 N/A
    784488 8cqw:BG (3.05) BS02 rna N/A GO:0003723 ... A0A8H6F5V7 N/A
    784489 8cqw:BH (3.05) BS01 rna N/A GO:0003723 ... A0A8H6F332 N/A
    784490 8cqw:BI (3.05) BS01 rna N/A GO:0002181 ... Q5A6R1 N/A
    784491 8cqw:BI (3.05) BS02 rna N/A GO:0002181 ... Q5A6R1 N/A
    784492 8cqw:BJ (3.05) BS01 rna N/A GO:0003729 ... A0A8H6BZ56 N/A
    784493 8cqw:BJ (3.05) BS02 MG N/A GO:0003729 ... A0A8H6BZ56 N/A
    784494 8cqw:BK (3.05) BS01 rna N/A GO:0002181 ... A0A8H6BUG0 N/A
    784495 8cqw:BK (3.05) BS02 rna N/A GO:0002181 ... A0A8H6BUG0 N/A
    784496 8cqw:BL (3.05) BS01 rna N/A GO:0003723 ... A0A8H6C4Y1 N/A
    784497 8cqw:BM (3.05) BS01 rna N/A GO:0003723 ... A0A1D8PK40 N/A
    784498 8cqw:BM (3.05) BS02 rna N/A GO:0003723 ... A0A1D8PK40 N/A
    784499 8cqw:BN (3.05) BS01 rna N/A GO:0003735 ... A0A8H6BZJ3 N/A
    784500 8cqw:BN (3.05) BS02 rna N/A GO:0003735 ... A0A8H6BZJ3 N/A
    784501 8cqw:BO (3.05) BS01 rna N/A GO:0003735 ... A0A8H6F1C8 N/A
    784502 8cqw:BO (3.05) BS02 rna N/A GO:0003735 ... A0A8H6F1C8 N/A
    784503 8cqw:BP (3.05) BS01 rna N/A GO:0002181 ... A0A1D8PM41 N/A
    784504 8cqw:BQ (3.05) BS01 rna N/A GO:0003735 ... A0A8H6C444 N/A
    784505 8cqw:BQ (3.05) BS02 MG N/A GO:0003735 ... A0A8H6C444 N/A
    784506 8cqw:BR (3.05) BS01 rna N/A GO:0002181 ... A0A8H6C4U1 N/A
    784507 8cqw:BR (3.05) BS02 rna N/A GO:0002181 ... A0A8H6C4U1 N/A
    784508 8cqw:BS (3.05) BS01 rna N/A GO:0003735 ... A0A8H6F6A1 N/A
    784509 8cqw:BS (3.05) BS02 rna N/A GO:0003735 ... A0A8H6F6A1 N/A
    784510 8cqw:BT (3.05) BS01 rna N/A GO:0003723 ... A0A8H6F3X2 N/A
    784511 8cqw:BT (3.05) BS02 rna N/A GO:0003723 ... A0A8H6F3X2 N/A
    784512 8cqw:BU (3.05) BS01 rna N/A GO:0003735 ... Q9P843 N/A
    784513 8cqw:BV (3.05) BS01 rna N/A GO:0003723 ... A0A8H6BVY8 N/A
    784514 8cqw:BV (3.05) BS02 MG N/A GO:0003723 ... A0A8H6BVY8 N/A
    784515 8cqw:BW (3.05) BS01 rna N/A GO:0002181 ... A0A8H6F0G8 N/A
    784516 8cqw:BX (3.05) BS01 rna N/A GO:0003723 ... A0A1D8PM75 N/A
    784517 8cqw:BY (3.05) BS01 rna N/A GO:0002181 ... A0A8H6F1M1 N/A
    784518 8cqw:BZ (3.05) BS01 rna N/A GO:0003735 ... O94008 N/A
    784519 8cqw:BZ (3.05) BS02 MG N/A GO:0003735 ... O94008 N/A
    784520 8cqw:BZ (3.05) BS03 MG N/A GO:0003735 ... O94008 N/A
    784521 8cqw:C (3.05) BS01 rna N/A GO:0000028 ... A0A8H6C395 N/A
    784522 8cqw:CA (3.05) BS01 rna N/A GO:0003735 ... A0A8H6BW57 N/A
    784523 8cqw:CB (3.05) BS01 rna N/A GO:0003735 ... A0A8H6F171 N/A
    784524 8cqw:CC (3.05) BS01 rna N/A GO:0000463 ... A0A8H6F6B7 N/A
    784525 8cqw:CC (3.05) BS02 rna N/A GO:0000463 ... A0A8H6F6B7 N/A
    784526 8cqw:CD (3.05) BS01 rna N/A GO:0003735 ... P47834 N/A
    784527 8cqw:CE (3.05) BS01 rna N/A GO:0003723 ... A0A1D8PF45 N/A
    784528 8cqw:CE (3.05) BS02 rna N/A GO:0003723 ... A0A1D8PF45 N/A
    784529 8cqw:CE (3.05) BS03 ZN N/A GO:0003723 ... A0A1D8PF45 N/A
    784530 8cqw:CF (3.05) BS01 rna N/A GO:0003735 ... A0A1D8PG16 N/A
    784531 8cqw:CG (3.05) BS01 rna N/A GO:0003735 ... Q96W55 N/A
    784532 8cqw:CG (3.05) BS02 rna N/A GO:0003735 ... Q96W55 N/A
    784533 8cqw:CH (3.05) BS01 rna N/A GO:0003735 ... A0A1D8PL68 N/A
    784534 8cqw:CH (3.05) BS02 ZN N/A GO:0003735 ... A0A1D8PL68 N/A
    784535 8cqw:CJ (3.05) BS01 rna N/A GO:0003735 ... A0A8H6BR69 N/A
    784536 8cqw:CJ (3.05) BS02 3K5 N/A GO:0003735 ... A0A8H6BR69 N/A
    784537 8cqw:CJ (3.05) BS03 ZN N/A GO:0003735 ... A0A8H6BR69 N/A
    784538 8cqw:CK (3.05) BS01 rna N/A GO:0003735 ... A0A1D8PP14 N/A
    784539 8cqw:CK (3.05) BS02 ZN N/A GO:0003735 ... A0A1D8PP14 N/A
    784540 8cqw:CL (3.05) BS01 rna N/A GO:0000723 ... A0A1D8PK71 N/A
    784541 8cqw:CL (3.05) BS02 rna N/A GO:0000723 ... A0A1D8PK71 N/A
    784542 8cqw:CN (3.05) BS01 rna N/A GO:0000028 ... A0A8H6C395 N/A
    784543 8cqw:CO (3.05) BS01 rna N/A GO:0003735 ... A0A8H6C387 N/A
    784544 8cqw:CP (3.05) BS01 rna N/A GO:0000054 ... A0A8H6BZ90 N/A
    784545 8cqw:CQ (3.05) BS01 rna N/A GO:0000054 ... A0A8H6BYS1 N/A
    784546 8cqw:CR (3.05) BS01 rna N/A GO:0003723 ... A0A1D8PCI6 N/A
    784547 8cqw:CS (3.05) BS01 rna N/A GO:0000054 ... A0A8H6BS29 N/A
    784548 8cqw:CT (3.05) BS01 rna N/A GO:0003735 ... A0A8H6BZ37 N/A
    784549 8cqw:CU (3.05) BS01 rna N/A GO:0003735 ... A0A8H6C655 N/A
    784550 8cqw:CV (3.05) BS01 rna N/A GO:0003735 ... A0A8H6F0S0 N/A
    784551 8cqw:CV (3.05) BS02 rna N/A GO:0003735 ... A0A8H6F0S0 N/A
    784552 8cqw:CW (3.05) BS01 rna N/A GO:0003723 ... A0A8H6F1X2 N/A
    784553 8cqw:CX (3.05) BS01 rna N/A GO:0003723 ... A0A8H6BWQ8 N/A
    784554 8cqw:CY (3.05) BS01 rna N/A GO:0003735 ... A0A1D8PN83 N/A
    784555 8cqw:CZ (3.05) BS01 rna N/A GO:0000028 ... A0A8H6C3A1 N/A
    784556 8cqw:D (3.05) BS01 rna N/A GO:0003735 ... A0A8H6C387 N/A
    784557 8cqw:DA (3.05) BS01 rna N/A GO:0003735 ... A0A8H6F4G0 N/A
    784558 8cqw:DB (3.05) BS01 rna N/A GO:0003735 ... A0A8H6F0V4 N/A
    784559 8cqw:DB (3.05) BS02 MG N/A GO:0003735 ... A0A8H6F0V4 N/A
    784560 8cqw:DC (3.05) BS01 rna N/A GO:0000028 ... A0A1D8PK22 N/A
    784561 8cqw:DC (3.05) BS02 MG N/A GO:0000028 ... A0A1D8PK22 N/A
    784562 8cqw:DD (3.05) BS01 rna N/A GO:0000462 ... O94017 N/A
    784563 8cqw:DE (3.05) BS01 rna N/A GO:0003735 ... A0A8H6BTR7 N/A
    784564 8cqw:DF (3.05) BS01 rna N/A GO:0003676 ... A0A8H6F3Y8 N/A
    784565 8cqw:DG (3.05) BS01 rna N/A GO:0000028 ... A0A8H6C5L4 N/A
    784566 8cqw:DG (3.05) BS02 MG N/A GO:0000028 ... A0A8H6C5L4 N/A
    784567 8cqw:DH (3.05) BS01 rna N/A GO:0003723 ... A0A8H6BYJ9 N/A
    784568 8cqw:DI (3.05) BS01 rna N/A GO:0003735 ... Q9P844 N/A
    784569 8cqw:DJ (3.05) BS01 rna N/A GO:0003735 ... A0A8H6F0N4 N/A
    784570 8cqw:DK (3.05) BS01 rna N/A GO:0003735 ... A0A8H6F0V0 N/A
    784571 8cqw:DL (3.05) BS01 rna N/A GO:0003735 ... A0A8H6C3K1 N/A
    784572 8cqw:DM (3.05) BS01 rna N/A N/A A0A8H6EZQ8 N/A
    784573 8cqw:DN (3.05) BS01 rna N/A GO:0003729 ... A0A8H6BTS1 N/A
    784574 8cqw:DN (3.05) BS02 ZN N/A GO:0003729 ... A0A8H6BTS1 N/A
    784575 8cqw:DO (3.05) BS01 rna N/A GO:0003735 ... A0A8H6BWE6 N/A
    784576 8cqw:DP (3.05) BS01 rna N/A GO:0000028 ... A0A8H6C0A5 N/A
    784577 8cqw:DQ (3.05) BS01 rna N/A GO:0002181 ... A0A1D8PTR4 N/A
    784578 8cqw:DQ (3.05) BS02 ZN N/A GO:0002181 ... A0A1D8PTR4 N/A
    784579 8cqw:DR (3.05) BS01 rna N/A GO:0003735 ... A0A1D8PSK2 N/A
    784580 8cqw:DS (3.05) BS01 rna N/A GO:0003735 ... Q5A109 N/A
    784581 8cqw:DS (3.05) BS02 ZN N/A GO:0003735 ... Q5A109 N/A
    784582 8cqw:DT (3.05) BS01 rna N/A GO:0001965 ... A0A8H6C3E7 N/A
    784583 8cqw:E (3.05) BS01 rna N/A GO:0000054 ... A0A8H6BZ90 N/A
    784584 8cqw:E (3.05) BS02 MG N/A GO:0000054 ... A0A8H6BZ90 N/A
    784585 8cqw:F (3.05) BS01 rna N/A GO:0000054 ... A0A8H6BYS1 N/A
    784586 8cqw:G (3.05) BS01 rna N/A GO:0003723 ... A0A1D8PCI6 N/A
    784587 8cqw:G (3.05) BS02 MG N/A GO:0003723 ... A0A1D8PCI6 N/A
    784588 8cqw:H (3.05) BS01 rna N/A GO:0000054 ... A0A8H6BS29 N/A
    784589 8cqw:H (3.05) BS02 MG N/A GO:0000054 ... A0A8H6BS29 N/A
    784590 8cqw:I (3.05) BS01 rna N/A GO:0003735 ... A0A8H6BZ37 N/A
    784591 8cqw:J (3.05) BS01 rna N/A GO:0003735 ... A0A8H6C655 N/A
    784592 8cqw:J (3.05) BS02 MG N/A GO:0003735 ... A0A8H6C655 N/A
    784593 8cqw:K (3.05) BS01 rna N/A GO:0003735 ... A0A8H6F0S0 N/A
    784594 8cqw:K (3.05) BS02 rna N/A GO:0003735 ... A0A8H6F0S0 N/A
    784595 8cqw:K (3.05) BS03 MG N/A GO:0003735 ... A0A8H6F0S0 N/A
    784596 8cqw:L (3.05) BS01 rna N/A GO:0003723 ... A0A8H6F1X2 N/A
    784597 8cqw:L1 (3.05) BS01 rna N/A GO:0003723 ... A0A8H6F4E7 N/A
    784598 8cqw:M (3.05) BS01 rna N/A GO:0003723 ... A0A8H6BWQ8 N/A
    784599 8cqw:N (3.05) BS01 rna N/A GO:0003735 ... A0A1D8PN83 N/A
    784600 8cqw:O (3.05) BS01 rna N/A GO:0000028 ... A0A8H6C3A1 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).