SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 3914 3915 3916 3917 3918 3919 3920 3921 3922 3923 3924 3925 3926 3927 3928 3929 3930 3931 3932 3933 3934 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    784601 8cqw:P (3.05) BS01 rna N/A GO:0003735 ... A0A8H6F4G0 N/A
    784602 8cqw:P0 (3.05) BS01 rna N/A GO:0000027 ... G1UA71 N/A
    784603 8cqw:Q (3.05) BS01 rna N/A GO:0003735 ... A0A8H6F0V4 N/A
    784604 8cqw:Q (3.05) BS02 MG N/A GO:0003735 ... A0A8H6F0V4 N/A
    784605 8cqw:R (3.05) BS01 rna N/A GO:0000028 ... A0A1D8PK22 N/A
    784606 8cqw:R (3.05) BS02 rna N/A GO:0000028 ... A0A1D8PK22 N/A
    784607 8cqw:R (3.05) BS03 MG N/A GO:0000028 ... A0A1D8PK22 N/A
    784608 8cqw:S (3.05) BS01 rna N/A GO:0000462 ... O94017 N/A
    784609 8cqw:T (3.05) BS01 rna N/A GO:0003735 ... A0A8H6BTR7 N/A
    784610 8cqw:U (3.05) BS01 rna N/A GO:0003676 ... A0A8H6F3Y8 N/A
    784611 8cqw:V (3.05) BS01 rna N/A GO:0000028 ... A0A8H6C5L4 N/A
    784612 8cqw:W (3.05) BS01 rna N/A GO:0003723 ... A0A8H6BYJ9 N/A
    784613 8cqw:X (3.05) BS01 rna N/A GO:0003735 ... Q9P844 N/A
    784614 8cqw:Y (3.05) BS01 rna N/A GO:0003735 ... A0A8H6F0N4 N/A
    784615 8cqw:Y (3.05) BS02 MG N/A GO:0003735 ... A0A8H6F0N4 N/A
    784616 8cqw:Z (3.05) BS01 rna N/A GO:0003735 ... A0A8H6F0V0 N/A
    784617 8cqw:Z (3.05) BS02 MG N/A GO:0003735 ... A0A8H6F0V0 N/A
    784618 8cqw:a (3.05) BS01 rna N/A GO:0003735 ... A0A8H6C3K1 N/A
    784619 8cqw:b (3.05) BS01 rna N/A N/A A0A8H6EZQ8 N/A
    784620 8cqw:c (3.05) BS01 rna N/A GO:0003729 ... A0A8H6BTS1 N/A
    784621 8cqw:c (3.05) BS02 ZN N/A GO:0003729 ... A0A8H6BTS1 N/A
    784622 8cqw:d (3.05) BS01 rna N/A GO:0003735 ... A0A8H6BWE6 N/A
    784623 8cqw:e (3.05) BS01 rna N/A GO:0000028 ... A0A8H6C0A5 N/A
    784624 8cqw:f (3.05) BS01 rna N/A GO:0002181 ... A0A1D8PTR4 N/A
    784625 8cqw:f (3.05) BS02 ZN N/A GO:0002181 ... A0A1D8PTR4 N/A
    784626 8cqw:g (3.05) BS01 rna N/A GO:0003735 ... A0A1D8PSK2 N/A
    784627 8cqw:h (3.05) BS01 rna N/A GO:0003735 ... Q5A109 N/A
    784628 8cqw:i (3.05) BS01 rna N/A GO:0000723 ... A0A1D8PK71 N/A
    784629 8cqw:i (3.05) BS02 rna N/A GO:0000723 ... A0A1D8PK71 N/A
    784630 8cqw:i (3.05) BS03 MG N/A GO:0000723 ... A0A1D8PK71 N/A
    784631 8cqw:j (3.05) BS01 rna N/A GO:0002181 ... A0A8H6F1X9 N/A
    784632 8cqw:j (3.05) BS02 rna N/A GO:0002181 ... A0A8H6F1X9 N/A
    784633 8cqw:j (3.05) BS03 MG N/A GO:0002181 ... A0A8H6F1X9 N/A
    784634 8cqw:k (3.05) BS01 rna N/A GO:0000027 ... Q59LS1 N/A
    784635 8cqw:k (3.05) BS02 MG N/A GO:0000027 ... Q59LS1 N/A
    784636 8cqw:k (3.05) BS03 MG N/A GO:0000027 ... Q59LS1 N/A
    784637 8cqw:k (3.05) BS04 MG N/A GO:0000027 ... Q59LS1 N/A
    784638 8cqw:l (3.05) BS01 rna N/A GO:0003735 ... A0A8H6F4H4 N/A
    784639 8cqw:l (3.05) BS02 rna N/A GO:0003735 ... A0A8H6F4H4 N/A
    784640 8cqw:l1 (3.05) BS01 rna N/A GO:0003723 ... A0A8H6F4E7 N/A
    784641 8cqw:m (3.05) BS01 rna N/A GO:0000027 ... G1UAA6 N/A
    784642 8cqw:m (3.05) BS02 rna N/A GO:0000027 ... G1UAA6 N/A
    784643 8cqw:n (3.05) BS01 rna N/A GO:0000027 ... Q9P834 N/A
    784644 8cqw:o (3.05) BS01 rna N/A GO:0000463 ... A0A8H6BVN2 N/A
    784645 8cqw:o (3.05) BS02 rna N/A GO:0000463 ... A0A8H6BVN2 N/A
    784646 8cqw:p (3.05) BS01 rna N/A GO:0003723 ... A0A8H6C337 N/A
    784647 8cqw:p (3.05) BS02 rna N/A GO:0003723 ... A0A8H6C337 N/A
    784648 8cqw:p0 (3.05) BS01 rna N/A GO:0000027 ... G1UA71 N/A
    784649 8cqw:q (3.05) BS01 rna N/A GO:0002181 ... A0A8H6C3N3 N/A
    784650 8cqw:r (3.05) BS01 rna N/A GO:0003735 ... Q5AIB8 N/A
    784651 8cqw:r (3.05) BS02 rna N/A GO:0003735 ... Q5AIB8 N/A
    784652 8cqw:r (3.05) BS03 MG N/A GO:0003735 ... Q5AIB8 N/A
    784653 8cqw:r (3.05) BS04 MG N/A GO:0003735 ... Q5AIB8 N/A
    784654 8cqw:s (3.05) BS01 rna N/A GO:0003735 ... A0A8H6F1S5 N/A
    784655 8cqw:s (3.05) BS02 rna N/A GO:0003735 ... A0A8H6F1S5 N/A
    784656 8cqw:t (3.05) BS01 rna N/A GO:0003723 ... A0A8H6F5V7 N/A
    784657 8cqw:t (3.05) BS02 rna N/A GO:0003723 ... A0A8H6F5V7 N/A
    784658 8cqw:u (3.05) BS01 rna N/A GO:0003723 ... A0A8H6F332 N/A
    784659 8cqw:v (3.05) BS01 rna N/A GO:0002181 ... Q5A6R1 N/A
    784660 8cqw:v (3.05) BS02 rna N/A GO:0002181 ... Q5A6R1 N/A
    784661 8cqw:v (3.05) BS03 MG N/A GO:0002181 ... Q5A6R1 N/A
    784662 8cqw:v (3.05) BS04 MG N/A GO:0002181 ... Q5A6R1 N/A
    784663 8cqw:w (3.05) BS01 rna N/A GO:0003729 ... A0A8H6BZ56 N/A
    784664 8cqw:w (3.05) BS02 MG N/A GO:0003729 ... A0A8H6BZ56 N/A
    784665 8cqw:x (3.05) BS01 rna N/A GO:0002181 ... A0A8H6BUG0 N/A
    784666 8cqw:x (3.05) BS02 rna N/A GO:0002181 ... A0A8H6BUG0 N/A
    784667 8cqw:x (3.05) BS03 MG N/A GO:0002181 ... A0A8H6BUG0 N/A
    784668 8cqw:x (3.05) BS04 MG N/A GO:0002181 ... A0A8H6BUG0 N/A
    784669 8cqw:y (3.05) BS01 rna N/A GO:0003723 ... A0A8H6C4Y1 N/A
    784670 8cqw:z (3.05) BS01 rna N/A GO:0003723 ... A0A1D8PK40 N/A
    784671 8cqw:z (3.05) BS02 rna N/A GO:0003723 ... A0A1D8PK40 N/A
    784672 8cqw:z (3.05) BS03 MG N/A GO:0003723 ... A0A1D8PK40 N/A
    784673 8cqx:A (2.27) BS01 ADP 2.7.1.15 GO:0004747 ... A0A0B0SD75 N/A
    784674 8cqx:A (2.27) BS02 MG 2.7.1.15 GO:0004747 ... A0A0B0SD75 N/A
    784675 8cqx:B (2.27) BS01 ADP 2.7.1.15 GO:0004747 ... A0A0B0SD75 N/A
    784676 8cqx:B (2.27) BS02 MG 2.7.1.15 GO:0004747 ... A0A0B0SD75 N/A
    784677 8cqx:C (2.27) BS01 ADP 2.7.1.15 GO:0004747 ... A0A0B0SD75 N/A
    784678 8cqx:C (2.27) BS02 MG 2.7.1.15 GO:0004747 ... A0A0B0SD75 N/A
    784679 8cqx:D (2.27) BS01 ADP 2.7.1.15 GO:0004747 ... A0A0B0SD75 N/A
    784680 8cqy:A (1.7) BS01 peptide 3.1.3.48 N/A P26045 37200868
    784681 8cr0:X (1.22) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 37283561
    784682 8cr0:X (1.22) BS02 VI6 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 37283561
    784683 8cr3:A (1.12) BS01 ZN 3.4.24.26 GO:0004175 ... P14756 37195753
    784684 8cr3:A (1.12) BS02 CA 3.4.24.26 GO:0004175 ... P14756 37195753
    784685 8cr4:A (0.91) BS01 ZN 3.4.24.26 GO:0004175 ... P14756 37195753
    784686 8cr4:A (0.91) BS02 CA 3.4.24.26 GO:0004175 ... P14756 37195753
    784687 8cr7:A (1.5) BS01 ZN 3.4.24.26 GO:0004175 ... P14756 37195753
    784688 8cr7:A (1.5) BS02 CA 3.4.24.26 GO:0004175 ... P14756 37195753
    784689 8cr7:B (1.5) BS01 ZN 3.4.24.26 GO:0004175 ... P14756 37195753
    784690 8cr7:B (1.5) BS02 CA 3.4.24.26 GO:0004175 ... P14756 37195753
    784691 8crc:A (1.65) BS01 VIH 2.7.11.21 N/A P53350 37603740
    784692 8crd:A (1.35) BS01 BYN 4.1.1.102 GO:0005737 ... A2QHE5 N/A
    784693 8crd:A (1.35) BS02 MN 4.1.1.102 GO:0005737 ... A2QHE5 N/A
    784694 8cre:0 (3.0) BS01 rna N/A GO:0003735 ... A0A8H6BZJ3 N/A
    784695 8cre:0 (3.0) BS02 rna N/A GO:0003735 ... A0A8H6BZJ3 N/A
    784696 8cre:12 (3.0) BS01 rna N/A GO:0003735 ... A0A8H6C5X8 N/A
    784697 8cre:2 (3.0) BS01 rna N/A GO:0003735 ... A0A8H6F1C8 N/A
    784698 8cre:2 (3.0) BS02 rna N/A GO:0003735 ... A0A8H6F1C8 N/A
    784699 8cre:5 (3.0) BS01 rna N/A GO:0002181 ... A0A1D8PM41 N/A
    784700 8cre:6 (3.0) BS01 rna N/A GO:0003735 ... A0A8H6C444 N/A
    784701 8cre:7 (3.0) BS01 rna N/A GO:0002181 ... A0A8H6C4U1 N/A
    784702 8cre:7 (3.0) BS02 rna N/A GO:0002181 ... A0A8H6C4U1 N/A
    784703 8cre:8 (3.0) BS01 rna N/A GO:0003735 ... A0A8H6F6A1 N/A
    784704 8cre:8 (3.0) BS02 rna N/A GO:0003735 ... A0A8H6F6A1 N/A
    784705 8cre:9 (3.0) BS01 rna N/A GO:0003723 ... A0A8H6F3X2 N/A
    784706 8cre:9 (3.0) BS02 rna N/A GO:0003723 ... A0A8H6F3X2 N/A
    784707 8cre:AA (3.0) BS01 rna N/A GO:0003735 ... Q9P843 N/A
    784708 8cre:AB (3.0) BS01 rna N/A GO:0003723 ... A0A8H6BVY8 N/A
    784709 8cre:AB (3.0) BS02 MG N/A GO:0003723 ... A0A8H6BVY8 N/A
    784710 8cre:AC (3.0) BS01 rna N/A GO:0002181 ... A0A8H6F0G8 N/A
    784711 8cre:AD (3.0) BS01 rna N/A GO:0003723 ... A0A1D8PM75 N/A
    784712 8cre:AE (3.0) BS01 rna N/A GO:0002181 ... A0A8H6F1M1 N/A
    784713 8cre:AE (3.0) BS02 MG N/A GO:0002181 ... A0A8H6F1M1 N/A
    784714 8cre:AF (3.0) BS01 rna N/A GO:0003735 ... O94008 N/A
    784715 8cre:AF (3.0) BS02 MG N/A GO:0003735 ... O94008 N/A
    784716 8cre:AG (3.0) BS01 rna N/A GO:0003735 ... A0A8H6BW57 N/A
    784717 8cre:AG (3.0) BS02 MG N/A GO:0003735 ... A0A8H6BW57 N/A
    784718 8cre:AG (3.0) BS03 MG N/A GO:0003735 ... A0A8H6BW57 N/A
    784719 8cre:AH (3.0) BS01 rna N/A GO:0003735 ... A0A8H6F171 N/A
    784720 8cre:AH (3.0) BS02 MG N/A GO:0003735 ... A0A8H6F171 N/A
    784721 8cre:AH (3.0) BS03 ZN N/A GO:0003735 ... A0A8H6F171 N/A
    784722 8cre:AH (3.0) BS04 MG N/A GO:0003735 ... A0A8H6F171 N/A
    784723 8cre:AI (3.0) BS01 rna N/A GO:0000463 ... A0A8H6F6B7 N/A
    784724 8cre:AI (3.0) BS02 rna N/A GO:0000463 ... A0A8H6F6B7 N/A
    784725 8cre:AJ (3.0) BS01 rna N/A GO:0003735 ... P47834 N/A
    784726 8cre:AK (3.0) BS01 rna N/A GO:0003723 ... A0A1D8PF45 N/A
    784727 8cre:AK (3.0) BS02 rna N/A GO:0003723 ... A0A1D8PF45 N/A
    784728 8cre:AK (3.0) BS03 ZN N/A GO:0003723 ... A0A1D8PF45 N/A
    784729 8cre:AL (3.0) BS01 rna N/A GO:0003735 ... A0A1D8PG16 N/A
    784730 8cre:AM (3.0) BS01 rna N/A GO:0003735 ... Q96W55 N/A
    784731 8cre:AM (3.0) BS02 rna N/A GO:0003735 ... Q96W55 N/A
    784732 8cre:AM (3.0) BS03 MG N/A GO:0003735 ... Q96W55 N/A
    784733 8cre:AN (3.0) BS01 rna N/A GO:0003735 ... A0A1D8PL68 N/A
    784734 8cre:AN (3.0) BS02 ZN N/A GO:0003735 ... A0A1D8PL68 N/A
    784735 8cre:AP (3.0) BS01 rna N/A GO:0003735 ... A0A8H6BR69 N/A
    784736 8cre:AP (3.0) BS02 3K5 N/A GO:0003735 ... A0A8H6BR69 N/A
    784737 8cre:AP (3.0) BS03 ZN N/A GO:0003735 ... A0A8H6BR69 N/A
    784738 8cre:AP (3.0) BS04 MG N/A GO:0003735 ... A0A8H6BR69 N/A
    784739 8cre:AQ (3.0) BS01 rna N/A GO:0003735 ... A0A1D8PP14 N/A
    784740 8cre:AQ (3.0) BS02 ZN N/A GO:0003735 ... A0A1D8PP14 N/A
    784741 8cre:AR (3.0) BS01 rna N/A GO:0001965 ... A0A8H6C3E7 N/A
    784742 8cre:AW (3.0) BS01 rna N/A GO:0002181 ... A0A8H6F1X9 N/A
    784743 8cre:AW (3.0) BS02 MG N/A GO:0002181 ... A0A8H6F1X9 N/A
    784744 8cre:AW (3.0) BS03 MG N/A GO:0002181 ... A0A8H6F1X9 N/A
    784745 8cre:AW (3.0) BS04 MG N/A GO:0002181 ... A0A8H6F1X9 N/A
    784746 8cre:AX (3.0) BS01 rna N/A GO:0000027 ... Q59LS1 N/A
    784747 8cre:AY (3.0) BS01 rna N/A GO:0003735 ... A0A8H6F4H4 N/A
    784748 8cre:AY (3.0) BS02 rna N/A GO:0003735 ... A0A8H6F4H4 N/A
    784749 8cre:AZ (3.0) BS01 rna N/A GO:0000027 ... G1UAA6 N/A
    784750 8cre:AZ (3.0) BS02 rna N/A GO:0000027 ... G1UAA6 N/A
    784751 8cre:AZ (3.0) BS03 MG N/A GO:0000027 ... G1UAA6 N/A
    784752 8cre:BA (3.0) BS01 rna N/A GO:0000027 ... Q9P834 N/A
    784753 8cre:BB (3.0) BS01 rna N/A GO:0000463 ... A0A8H6BVN2 N/A
    784754 8cre:BB (3.0) BS02 rna N/A GO:0000463 ... A0A8H6BVN2 N/A
    784755 8cre:BB (3.0) BS03 MG N/A GO:0000463 ... A0A8H6BVN2 N/A
    784756 8cre:BC (3.0) BS01 rna N/A GO:0003723 ... A0A8H6C337 N/A
    784757 8cre:BC (3.0) BS02 rna N/A GO:0003723 ... A0A8H6C337 N/A
    784758 8cre:BD (3.0) BS01 rna N/A GO:0002181 ... A0A8H6C3N3 N/A
    784759 8cre:BE (3.0) BS01 rna N/A GO:0003735 ... Q5AIB8 N/A
    784760 8cre:BE (3.0) BS02 rna N/A GO:0003735 ... Q5AIB8 N/A
    784761 8cre:BE (3.0) BS03 MG N/A GO:0003735 ... Q5AIB8 N/A
    784762 8cre:BF (3.0) BS01 rna N/A GO:0003735 ... A0A8H6F1S5 N/A
    784763 8cre:BF (3.0) BS02 rna N/A GO:0003735 ... A0A8H6F1S5 N/A
    784764 8cre:BG (3.0) BS01 rna N/A GO:0003723 ... A0A8H6F5V7 N/A
    784765 8cre:BG (3.0) BS02 rna N/A GO:0003723 ... A0A8H6F5V7 N/A
    784766 8cre:BH (3.0) BS01 rna N/A GO:0003723 ... A0A8H6F332 N/A
    784767 8cre:BI (3.0) BS01 rna N/A GO:0002181 ... Q5A6R1 N/A
    784768 8cre:BI (3.0) BS02 rna N/A GO:0002181 ... Q5A6R1 N/A
    784769 8cre:BJ (3.0) BS01 rna N/A GO:0003729 ... A0A8H6BZ56 N/A
    784770 8cre:BJ (3.0) BS02 MG N/A GO:0003729 ... A0A8H6BZ56 N/A
    784771 8cre:BK (3.0) BS01 rna N/A GO:0002181 ... A0A8H6BUG0 N/A
    784772 8cre:BK (3.0) BS02 rna N/A GO:0002181 ... A0A8H6BUG0 N/A
    784773 8cre:BL (3.0) BS01 rna N/A GO:0003723 ... A0A8H6C4Y1 N/A
    784774 8cre:BM (3.0) BS01 rna N/A GO:0003723 ... A0A1D8PK40 N/A
    784775 8cre:BM (3.0) BS02 rna N/A GO:0003723 ... A0A1D8PK40 N/A
    784776 8cre:BN (3.0) BS01 rna N/A GO:0003735 ... A0A8H6BZJ3 N/A
    784777 8cre:BN (3.0) BS02 rna N/A GO:0003735 ... A0A8H6BZJ3 N/A
    784778 8cre:BO (3.0) BS01 rna N/A GO:0003735 ... A0A8H6F1C8 N/A
    784779 8cre:BO (3.0) BS02 rna N/A GO:0003735 ... A0A8H6F1C8 N/A
    784780 8cre:BP (3.0) BS01 rna N/A GO:0002181 ... A0A1D8PM41 N/A
    784781 8cre:BQ (3.0) BS01 rna N/A GO:0003735 ... A0A8H6C444 N/A
    784782 8cre:BQ (3.0) BS02 MG N/A GO:0003735 ... A0A8H6C444 N/A
    784783 8cre:BR (3.0) BS01 rna N/A GO:0002181 ... A0A8H6C4U1 N/A
    784784 8cre:BR (3.0) BS02 rna N/A GO:0002181 ... A0A8H6C4U1 N/A
    784785 8cre:BS (3.0) BS01 rna N/A GO:0003735 ... A0A8H6F6A1 N/A
    784786 8cre:BS (3.0) BS02 rna N/A GO:0003735 ... A0A8H6F6A1 N/A
    784787 8cre:BT (3.0) BS01 rna N/A GO:0003723 ... A0A8H6F3X2 N/A
    784788 8cre:BT (3.0) BS02 rna N/A GO:0003723 ... A0A8H6F3X2 N/A
    784789 8cre:BU (3.0) BS01 rna N/A GO:0003735 ... Q9P843 N/A
    784790 8cre:BV (3.0) BS01 rna N/A GO:0003723 ... A0A8H6BVY8 N/A
    784791 8cre:BW (3.0) BS01 rna N/A GO:0002181 ... A0A8H6F0G8 N/A
    784792 8cre:BX (3.0) BS01 rna N/A GO:0003723 ... A0A1D8PM75 N/A
    784793 8cre:BY (3.0) BS01 rna N/A GO:0002181 ... A0A8H6F1M1 N/A
    784794 8cre:BZ (3.0) BS01 rna N/A GO:0003735 ... O94008 N/A
    784795 8cre:BZ (3.0) BS02 MG N/A GO:0003735 ... O94008 N/A
    784796 8cre:C (3.0) BS01 rna N/A GO:0000028 ... A0A8H6C395 N/A
    784797 8cre:CA (3.0) BS01 rna N/A GO:0003735 ... A0A8H6BW57 N/A
    784798 8cre:CB (3.0) BS01 rna N/A GO:0003735 ... A0A8H6F171 N/A
    784799 8cre:CC (3.0) BS01 rna N/A GO:0000463 ... A0A8H6F6B7 N/A
    784800 8cre:CC (3.0) BS02 rna N/A GO:0000463 ... A0A8H6F6B7 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).