SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 3914 3915 3916 3917 3918 3919 3920 3921 3922 3923 3924 3925 3926 3927 3928 3929 3930 3931 3932 3933 3934 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    784601 8cd0:A (2.42) BS01 A3P 2.8.2.8
    3.5.1.-
    GO:0000139 ... P52848 38351061
    784602 8cd0:A (2.42) BS02 CA 2.8.2.8
    3.5.1.-
    GO:0000139 ... P52848 38351061
    784603 8cd1:2 (3.0) BS01 rna ? GO:0003735 ... Q9HZN4 38443577
    784604 8cd1:4 (3.0) BS01 rna ? GO:0003735 ... P29436 38443577
    784605 8cd1:5 (3.0) BS01 rna ? GO:0003735 ... Q9I0A1 38443577
    784606 8cd1:6 (3.0) BS01 rna ? GO:0003735 ... Q9HWF6 38443577
    784607 8cd1:C (3.0) BS01 rna ? GO:0002181 ... Q9HWD8 38443577
    784608 8cd1:D (3.0) BS01 rna ? GO:0003735 ... Q9HWD5 38443577
    784609 8cd1:E (3.0) BS01 rna ? GO:0003735 ... Q9HWD6 38443577
    784610 8cd1:F (3.0) BS01 rna ? GO:0000049 ... Q9HWE7 38443577
    784611 8cd1:F (3.0) BS02 rna ? GO:0000049 ... Q9HWE7 38443577
    784612 8cd1:F (3.0) BS03 rna ? GO:0000049 ... Q9HWE7 38443577
    784613 8cd1:G (3.0) BS01 rna ? GO:0002181 ... Q9HWF0 38443577
    784614 8cd1:H (3.0) BS01 rna ? GO:0003735 ... Q9HUN2 38443577
    784615 8cd1:J (3.0) BS01 rna ? GO:0003729 ... Q9HVY2 38443577
    784616 8cd1:K (3.0) BS01 rna ? GO:0003735 ... Q9HWE5 38443577
    784617 8cd1:K (3.0) BS02 rna ? GO:0003735 ... Q9HWE5 38443577
    784618 8cd1:L (3.0) BS01 rna ? GO:0003735 ... Q9HWF4 38443577
    784619 8cd1:Le (3.0) BS01 rna ? GO:0003735 ... Q9HUD0 38443577
    784620 8cd1:Le (3.0) BS02 rna ? GO:0003735 ... Q9HUD0 38443577
    784621 8cd1:M (3.0) BS01 rna ? GO:0003735 ... Q9HWE2 38443577
    784622 8cd1:M (3.0) BS02 rna ? GO:0003735 ... Q9HWE2 38443577
    784623 8cd1:N (3.0) BS01 rna ? GO:0003735 ... O52761 38443577
    784624 8cd1:O (3.0) BS01 rna ? GO:0003735 ... Q9HWF1 38443577
    784625 8cd1:O (3.0) BS02 rna ? GO:0003735 ... Q9HWF1 38443577
    784626 8cd1:P (3.0) BS01 rna ? GO:0003735 ... Q9HXQ2 38443577
    784627 8cd1:P (3.0) BS02 rna ? GO:0003735 ... Q9HXQ2 38443577
    784628 8cd1:P (3.0) BS03 MG ? GO:0003735 ... Q9HXQ2 38443577
    784629 8cd1:Q (3.0) BS01 rna ? GO:0000027 ... Q9I0A2 38443577
    784630 8cd1:R (3.0) BS01 rna ? GO:0003723 ... Q9HVL6 38443577
    784631 8cd1:S (3.0) BS01 rna ? GO:0003735 ... Q9HWE0 38443577
    784632 8cd1:T (3.0) BS01 rna ? GO:0003735 ... Q9HWD7 38443577
    784633 8cd1:U (3.0) BS01 rna ? GO:0003723 ... Q9HWE6 38443577
    784634 8cd1:V (3.0) BS01 rna ? GO:0003723 ... Q9HVC4 38443577
    784635 8cd1:V (3.0) BS02 rna ? GO:0003723 ... Q9HVC4 38443577
    784636 8cd1:W (3.0) BS01 rna ? GO:0003735 ... Q9HVL7 38443577
    784637 8cd1:W (3.0) BS02 rna ? GO:0003735 ... Q9HVL7 38443577
    784638 8cd1:X (3.0) BS01 rna ? GO:0003735 ... Q9HTN8 38443577
    784639 8cd1:Y (3.0) BS01 rna ? GO:0003735 ... Q9HWE3 38443577
    784640 8cd1:Z (3.0) BS01 rna ? GO:0003735 ... Q9HWF3 38443577
    784641 8cd1:Z (3.0) BS02 rna ? GO:0003735 ... Q9HWF3 38443577
    784642 8cd1:b (3.0) BS01 rna ? GO:0003735 ... O82850 38443577
    784643 8cd1:c (3.0) BS01 rna ? GO:0003676 ... Q9HWE1 38443577
    784644 8cd1:d (3.0) BS01 rna ? GO:0003723 ... O52759 38443577
    784645 8cd1:e (3.0) BS01 rna ? GO:0003723 ... Q9HWF2 38443577
    784646 8cd1:f (3.0) BS01 rna ? GO:0003735 ... Q9HUM9 38443577
    784647 8cd1:g (3.0) BS01 rna ? GO:0000049 ... Q9HWD1 38443577
    784648 8cd1:h (3.0) BS01 rna ? GO:0003735 ... Q9HWE9 38443577
    784649 8cd1:i (3.0) BS01 rna ? GO:0003723 ... Q9HVY3 38443577
    784650 8cd1:j (3.0) BS01 rna ? GO:0000049 ... Q9HWD4 38443577
    784651 8cd1:k (3.0) BS01 rna ? GO:0003735 ... Q9HWF8 38443577
    784652 8cd1:l (3.0) BS01 rna ? GO:0000049 ... Q9HWD0 38443577
    784653 8cd1:m (3.0) BS01 rna ? GO:0000049 ... Q9HWF7 38443577
    784654 8cd1:m (3.0) BS02 rna ? GO:0000049 ... Q9HWF7 38443577
    784655 8cd1:n (3.0) BS01 rna ? GO:0003735 ... Q9HWE8 38443577
    784656 8cd1:o (3.0) BS01 rna ? GO:0003735 ... Q9HV58 38443577
    784657 8cd1:o (3.0) BS02 rna ? GO:0003735 ... Q9HV58 38443577
    784658 8cd1:p (3.0) BS01 rna ? GO:0003735 ... Q9HXP9 38443577
    784659 8cd1:q (3.0) BS01 rna ? GO:0003735 ... Q9HWE4 38443577
    784660 8cd1:r (3.0) BS01 rna ? GO:0003735 ... Q9HUN0 38443577
    784661 8cd1:s (3.0) BS01 rna ? GO:0003723 ... Q9HWD9 38443577
    784662 8cd1:t (3.0) BS01 rna ? GO:0003723 ... Q9HVM1 38443577
    784663 8cd1:u (3.0) BS01 rna ? GO:0003735 ... Q9I5V8 38443577
    784664 8cd1:v (3.0) BS01 rna ? N/A Q8SDE8 38443577
    784665 8cd1:v (3.0) BS02 rna ? N/A Q8SDE8 38443577
    784666 8cd3:B (1.9) BS01 peptide ? N/A Q14160 37430142
    784667 8cd8:A (1.65) BS01 peptide 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784668 8cd8:A (1.65) BS02 CA 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784669 8cd8:A (1.65) BS03 CA 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784670 8cd8:A (1.65) BS04 ZN 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784671 8cd8:A (1.65) BS05 AES 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784672 8cd8:C (1.65) BS01 peptide 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784673 8cd8:C (1.65) BS02 CA 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784674 8cd8:C (1.65) BS03 CA 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784675 8cd8:C (1.65) BS04 ZN 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784676 8cd8:C (1.65) BS05 AES 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784677 8cd9:AAA (1.55) BS01 UA9 ? GO:0006508 ... Q8MNY2 38757505
    784678 8cdb:A (4.5) BS01 ZN 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784679 8cdb:A (4.5) BS02 CA 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784680 8cdb:B (4.5) BS01 ZN 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784681 8cdb:B (4.5) BS02 CA 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784682 8cdb:C (4.5) BS01 ZN 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784683 8cdb:C (4.5) BS02 CA 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784684 8cdb:D (4.5) BS01 ZN 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784685 8cdb:D (4.5) BS02 CA 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784686 8cdb:E (4.5) BS01 ZN 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784687 8cdb:E (4.5) BS02 CA 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784688 8cdb:F (4.5) BS01 ZN 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784689 8cdb:F (4.5) BS02 CA 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784690 8cdb:G (4.5) BS01 ZN 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784691 8cdb:G (4.5) BS02 CA 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784692 8cdb:H (4.5) BS01 ZN 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784693 8cdb:H (4.5) BS02 CA 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784694 8cdb:I (4.5) BS01 ZN 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784695 8cdb:I (4.5) BS02 CA 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784696 8cdb:J (4.5) BS01 ZN 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784697 8cdb:J (4.5) BS02 CA 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784698 8cdb:K (4.5) BS01 ZN 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784699 8cdb:K (4.5) BS02 CA 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784700 8cdb:L (4.5) BS01 ZN 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784701 8cdb:L (4.5) BS02 CA 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784702 8cdb:M (4.5) BS01 ZN 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784703 8cdb:M (4.5) BS02 CA 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784704 8cdb:N (4.5) BS01 ZN 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784705 8cdb:N (4.5) BS02 CA 3.4.24.- GO:0008237 ... Q8TL28 36857690
    784706 8cdf:A (1.77) BS01 FE2 1.14.11.64 GO:0005506 ... P76621 N/A
    784707 8cdg:A (2.9) BS01 UTF ? GO:0002225 ... Q16552 37449080
    784708 8cdg:B (2.9) BS01 UTF ? GO:0002225 ... Q16552 37449080
    784709 8cdj:C (3.4) BS01 peptide ? GO:0000082 ... Q13616 37028429
    784710 8cdk:R (3.32) BS01 ZN 2.3.2.27
    2.3.2.32
    GO:0000082 ... P62877 37028429
    784711 8cdk:R (3.32) BS02 ZN 2.3.2.27
    2.3.2.32
    GO:0000082 ... P62877 37028429
    784712 8cdk:R (3.32) BS03 ZN 2.3.2.27
    2.3.2.32
    GO:0000082 ... P62877 37028429
    784713 8cdl:0 (2.72) BS01 rna ? GO:0000462 ... P0CX31 38030725
    784714 8cdl:1 (2.72) BS01 rna ? GO:0002181 ... Q3E792 38030725
    784715 8cdl:2 (2.72) BS01 rna ? GO:0000054 ... P39938 38030725
    784716 8cdl:2 (2.72) BS02 ZN ? GO:0000054 ... P39938 38030725
    784717 8cdl:3 (2.72) BS01 rna ? GO:0000028 ... P35997 38030725
    784718 8cdl:4 (2.72) BS01 rna ? GO:0000028 ... Q3E7X9 38030725
    784719 8cdl:5 (2.72) BS01 rna ? GO:0002181 ... P41057 38030725
    784720 8cdl:5 (2.72) BS02 ZN ? GO:0002181 ... P41057 38030725
    784721 8cdl:6 (2.72) BS01 rna ? GO:0002181 ... P0CX33 38030725
    784722 8cdl:7 (2.72) BS01 rna ? GO:0001965 ... P38011 38030725
    784723 8cdl:8 (2.72) BS01 rna ? GO:0000028 ... P05759 38030725
    784724 8cdl:A (2.72) BS01 rna ? GO:0000470 ... P26784 38030725
    784725 8cdl:B (2.72) BS01 rna ? GO:0000448 ... P05740 38030725
    784726 8cdl:B (2.72) BS02 rna ? GO:0000448 ... P05740 38030725
    784727 8cdl:C (2.72) BS01 rna ? GO:0002181 ... P0CX49 38030725
    784728 8cdl:D (2.72) BS01 rna ? GO:0002181 ... P0CX82 38030725
    784729 8cdl:D (2.72) BS02 rna ? GO:0002181 ... P0CX82 38030725
    784730 8cdl:DD (2.72) BS01 rna ? GO:0000027 ... P05317 38030725
    784731 8cdl:E (2.72) BS01 rna ? GO:0002181 ... P0CX23 38030725
    784732 8cdl:E (2.72) BS02 rna ? GO:0002181 ... P0CX23 38030725
    784733 8cdl:EE (2.72) BS01 rna ? GO:0002181 ... P0CX45 38030725
    784734 8cdl:EE (2.72) BS02 rna ? GO:0002181 ... P0CX45 38030725
    784735 8cdl:Ee (2.72) BS01 rna ? GO:0000027 ... P0CX53 38030725
    784736 8cdl:F (2.72) BS01 rna ? GO:0002181 ... Q02753 38030725
    784737 8cdl:F (2.72) BS02 rna ? GO:0002181 ... Q02753 38030725
    784738 8cdl:FF (2.72) BS01 rna ? GO:0000027 ... P14126 38030725
    784739 8cdl:G (2.72) BS01 rna ? GO:0002181 ... P05749 38030725
    784740 8cdl:GG (2.72) BS01 rna ? GO:0002181 ... P10664 38030725
    784741 8cdl:GG (2.72) BS02 rna ? GO:0002181 ... P10664 38030725
    784742 8cdl:H (2.72) BS01 rna ? GO:0002181 ... P0CX41 38030725
    784743 8cdl:H (2.72) BS02 rna ? GO:0002181 ... P0CX41 38030725
    784744 8cdl:HH (2.72) BS01 rna ? GO:0000027 ... P26321 38030725
    784745 8cdl:HH (2.72) BS02 rna ? GO:0000027 ... P26321 38030725
    784746 8cdl:I (2.72) BS01 rna ? GO:0002181 ... P04449 38030725
    784747 8cdl:II (2.72) BS01 rna ? GO:0000027 ... Q02326 38030725
    784748 8cdl:J (2.72) BS01 rna ? GO:0000027 ... P04456 38030725
    784749 8cdl:J (2.72) BS02 rna ? GO:0000027 ... P04456 38030725
    784750 8cdl:JJ (2.72) BS01 rna ? GO:0000463 ... P05737 38030725
    784751 8cdl:JJ (2.72) BS02 rna ? GO:0000463 ... P05737 38030725
    784752 8cdl:K (2.72) BS01 rna ? GO:0002181 ... P05743 38030725
    784753 8cdl:K (2.72) BS02 rna ? GO:0002181 ... P05743 38030725
    784754 8cdl:KK (2.72) BS01 rna ? GO:0000470 ... P17076 38030725
    784755 8cdl:KK (2.72) BS02 rna ? GO:0000470 ... P17076 38030725
    784756 8cdl:L (2.72) BS01 rna ? GO:0002181 ... P0C2H6 38030725
    784757 8cdl:LL (2.72) BS01 rna ? GO:0002181 ... P05738 38030725
    784758 8cdl:M (2.72) BS01 rna ? GO:0002181 ... P02406 38030725
    784759 8cdl:MM (2.72) BS01 rna ? GO:0000027 ... P41805 38030725
    784760 8cdl:MM (2.72) BS02 rna ? GO:0000027 ... P41805 38030725
    784761 8cdl:MM (2.72) BS03 rna ? GO:0000027 ... P41805 38030725
    784762 8cdl:N (2.72) BS01 rna ? GO:0002181 ... P05747 38030725
    784763 8cdl:NN (2.72) BS01 rna ? GO:0000027 ... P0C0W9 38030725
    784764 8cdl:NN (2.72) BS02 rna ? GO:0000027 ... P0C0W9 38030725
    784765 8cdl:O (2.72) BS01 rna ? GO:0002181 ... P14120 38030725
    784766 8cdl:OO (2.72) BS01 rna ? GO:0002181 ... Q12690 38030725
    784767 8cdl:OO (2.72) BS02 rna ? GO:0002181 ... Q12690 38030725
    784768 8cdl:P (2.72) BS01 rna ? GO:0002181 ... P0C2H8 38030725
    784769 8cdl:PP (2.72) BS01 rna ? GO:0000027 ... P36105 38030725
    784770 8cdl:Q (2.72) BS01 rna ? GO:0002181 ... P38061 38030725
    784771 8cdl:QQ (2.72) BS01 rna ? GO:0000470 ... P05748 38030725
    784772 8cdl:QQ (2.72) BS02 rna ? GO:0000470 ... P05748 38030725
    784773 8cdl:R (2.72) BS01 rna ? GO:0000027 ... P05744 38030725
    784774 8cdl:S (2.72) BS01 rna ? GO:0002181 ... P87262 38030725
    784775 8cdl:S (2.72) BS02 ZN ? GO:0002181 ... P87262 38030725
    784776 8cdl:T (2.72) BS01 rna ? GO:0000463 ... P0CX84 38030725
    784777 8cdl:T (2.72) BS02 rna ? GO:0000463 ... P0CX84 38030725
    784778 8cdl:U (2.72) BS01 rna ? GO:0000470 ... P05745 38030725
    784779 8cdl:V (2.72) BS01 rna ? GO:0000448 ... P49166 38030725
    784780 8cdl:V (2.72) BS02 rna ? GO:0000448 ... P49166 38030725
    784781 8cdl:V (2.72) BS03 ZN ? GO:0000448 ... P49166 38030725
    784782 8cdl:W (2.72) BS01 rna ? GO:0002181 ... P49167 38030725
    784783 8cdl:X (2.72) BS01 rna ? GO:0002181 ... P04650 38030725
    784784 8cdl:X (2.72) BS02 rna ? GO:0002181 ... P04650 38030725
    784785 8cdl:Y (2.72) BS01 rna ? GO:0000027 ... P0CH08 38030725
    784786 8cdl:Y (2.72) BS02 ZN ? GO:0000027 ... P0CH08 38030725
    784787 8cdl:a (2.72) BS01 rna ? GO:0002181 ... P0CX27 38030725
    784788 8cdl:a (2.72) BS02 rna ? GO:0002181 ... P0CX27 38030725
    784789 8cdl:a (2.72) BS03 ZN ? GO:0002181 ... P0CX27 38030725
    784790 8cdl:b (2.72) BS01 rna ? GO:0002181 ... P0CX25 38030725
    784791 8cdl:b (2.72) BS02 ZN ? GO:0002181 ... P0CX25 38030725
    784792 8cdl:d (2.72) BS01 rna ? GO:0000028 ... P32905 38030725
    784793 8cdl:e (2.72) BS01 rna ? GO:0000462 ... P33442 38030725
    784794 8cdl:e (2.72) BS02 rna ? GO:0000462 ... P33442 38030725
    784795 8cdl:f (2.72) BS01 rna ? GO:0000054 ... P25443 38030725
    784796 8cdl:g (2.72) BS01 rna ? GO:0000054 ... P05750 38030725
    784797 8cdl:h (2.72) BS01 rna ? GO:0002181 ... P0CX35 38030725
    784798 8cdl:i (2.72) BS01 rna ? GO:0000054 ... P26783 38030725
    784799 8cdl:j (2.72) BS01 rna ? GO:0000462 ... P0CX37 38030725
    784800 8cdl:k (2.72) BS01 rna ? GO:0002181 ... P26786 38030725

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).