SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    785401 8cf5:JJ (2.71) BS01 rna ? GO:0000463 ... P05737 38030725
    785402 8cf5:JJ (2.71) BS02 rna ? GO:0000463 ... P05737 38030725
    785403 8cf5:K (2.71) BS01 rna ? GO:0002181 ... P05743 38030725
    785404 8cf5:K (2.71) BS02 rna ? GO:0002181 ... P05743 38030725
    785405 8cf5:KK (2.71) BS01 rna ? GO:0000470 ... P17076 38030725
    785406 8cf5:KK (2.71) BS02 rna ? GO:0000470 ... P17076 38030725
    785407 8cf5:L (2.71) BS01 rna ? GO:0002181 ... P0C2H6 38030725
    785408 8cf5:LL (2.71) BS01 rna ? GO:0003735 ... N/A 38030725
    785409 8cf5:M (2.71) BS01 rna ? GO:0002181 ... P02406 38030725
    785410 8cf5:MM (2.71) BS01 rna ? GO:0000027 ... P41805 38030725
    785411 8cf5:MM (2.71) BS02 rna ? GO:0000027 ... P41805 38030725
    785412 8cf5:MM (2.71) BS03 rna ? GO:0000027 ... P41805 38030725
    785413 8cf5:N (2.71) BS01 rna ? GO:0002181 ... P05747 38030725
    785414 8cf5:NN (2.71) BS01 rna ? GO:0000027 ... P0C0W9 38030725
    785415 8cf5:NN (2.71) BS02 rna ? GO:0000027 ... P0C0W9 38030725
    785416 8cf5:O (2.71) BS01 rna ? GO:0002181 ... P14120 38030725
    785417 8cf5:OO (2.71) BS01 rna ? GO:0002181 ... Q12690 38030725
    785418 8cf5:OO (2.71) BS02 rna ? GO:0002181 ... Q12690 38030725
    785419 8cf5:P (2.71) BS01 rna ? GO:0002181 ... P0C2H8 38030725
    785420 8cf5:PP (2.71) BS01 rna ? GO:0000027 ... P36105 38030725
    785421 8cf5:Q (2.71) BS01 rna ? GO:0002181 ... P38061 38030725
    785422 8cf5:QQ (2.71) BS01 rna ? GO:0000470 ... P05748 38030725
    785423 8cf5:QQ (2.71) BS02 rna ? GO:0000470 ... P05748 38030725
    785424 8cf5:R (2.71) BS01 rna ? GO:0000027 ... P05744 38030725
    785425 8cf5:S (2.71) BS01 rna ? GO:0002181 ... P87262 38030725
    785426 8cf5:S (2.71) BS02 ZN ? GO:0002181 ... P87262 38030725
    785427 8cf5:T (2.71) BS01 rna ? GO:0000463 ... P0CX84 38030725
    785428 8cf5:T (2.71) BS02 rna ? GO:0000463 ... P0CX84 38030725
    785429 8cf5:U (2.71) BS01 rna ? GO:0000470 ... P05745 38030725
    785430 8cf5:V (2.71) BS01 rna ? GO:0000448 ... P49166 38030725
    785431 8cf5:V (2.71) BS02 rna ? GO:0000448 ... P49166 38030725
    785432 8cf5:V (2.71) BS03 ZN ? GO:0000448 ... P49166 38030725
    785433 8cf5:W (2.71) BS01 rna ? GO:0002181 ... P49167 38030725
    785434 8cf5:X (2.71) BS01 rna ? GO:0002181 ... P04650 38030725
    785435 8cf5:X (2.71) BS02 rna ? GO:0002181 ... P04650 38030725
    785436 8cf5:Y (2.71) BS01 rna ? GO:0000027 ... P0CH08 38030725
    785437 8cf5:Y (2.71) BS02 ZN ? GO:0000027 ... P0CH08 38030725
    785438 8cf5:a (2.71) BS01 rna ? GO:0002181 ... P0CX27 38030725
    785439 8cf5:a (2.71) BS02 rna ? GO:0002181 ... P0CX27 38030725
    785440 8cf5:a (2.71) BS03 ZN ? GO:0002181 ... P0CX27 38030725
    785441 8cf5:b (2.71) BS01 rna ? GO:0002181 ... P0CX25 38030725
    785442 8cf5:b (2.71) BS02 rna ? GO:0002181 ... P0CX25 38030725
    785443 8cf5:b (2.71) BS03 ZN ? GO:0002181 ... P0CX25 38030725
    785444 8cf5:d (2.71) BS01 rna ? GO:0000028 ... P32905 38030725
    785445 8cf5:e (2.71) BS01 rna ? GO:0000462 ... P33442 38030725
    785446 8cf5:e (2.71) BS02 rna ? GO:0000462 ... P33442 38030725
    785447 8cf5:f (2.71) BS01 rna ? GO:0000054 ... P25443 38030725
    785448 8cf5:g (2.71) BS01 rna ? GO:0003723 ... N/A 38030725
    785449 8cf5:h (2.71) BS01 rna ? GO:0002181 ... P0CX35 38030725
    785450 8cf5:i (2.71) BS01 rna ? GO:0000054 ... P26783 38030725
    785451 8cf5:j (2.71) BS01 rna ? GO:0000462 ... P0CX37 38030725
    785452 8cf5:k (2.71) BS01 rna ? GO:0002181 ... P26786 38030725
    785453 8cf5:l (2.71) BS01 rna ? GO:0000462 ... P0CX40 38030725
    785454 8cf5:m (2.71) BS01 rna ? GO:0000462 ... O13516 38030725
    785455 8cf5:n (2.71) BS01 rna ? GO:0000054 ... Q08745 38030725
    785456 8cf5:o (2.71) BS01 rna ? GO:0000028 ... P0CX47 38030725
    785457 8cf5:p (2.71) BS01 rna ? GO:0000462 ... P05756 38030725
    785458 8cf5:q (2.71) BS01 rna ? GO:0000028 ... P06367 38030725
    785459 8cf5:r (2.71) BS01 rna ? GO:0000054 ... Q01855 38030725
    785460 8cf5:s (2.71) BS01 rna ? GO:0000462 ... P0CX51 38030725
    785461 8cf5:t (2.71) BS01 rna ? GO:0000028 ... P02407 38030725
    785462 8cf5:u (2.71) BS01 rna ? GO:0000054 ... P0CX55 38030725
    785463 8cf5:v (2.71) BS01 rna ? GO:0000054 ... P07280 38030725
    785464 8cf5:w (2.71) BS01 rna ? GO:0003723 ... N/A 38030725
    785465 8cf5:x (2.71) BS01 rna ? GO:0000447 ... P0C0V8 38030725
    785466 8cf5:y (2.71) BS01 rna ? GO:0002181 ... P0C0W1 38030725
    785467 8cf5:z (2.71) BS01 rna ? GO:0000462 ... P0CX29 38030725
    785468 8cf5:z (2.71) BS02 rna ? GO:0000462 ... P0CX29 38030725
    785469 8cf6:A (1.34) BS01 MFU ? N/A A0A0S4TLR1 37137399
    785470 8cf6:A (1.34) BS02 MFU ? N/A A0A0S4TLR1 37137399
    785471 8cf6:A (1.34) BS03 QQ7 ? N/A A0A0S4TLR1 37137399
    785472 8cf6:A (1.34) BS04 MFU ? N/A A0A0S4TLR1 37137399
    785473 8cf6:B (1.34) BS01 MFU ? N/A A0A0S4TLR1 37137399
    785474 8cf6:B (1.34) BS02 MFU ? N/A A0A0S4TLR1 37137399
    785475 8cf6:B (1.34) BS03 QQ7 ? N/A A0A0S4TLR1 37137399
    785476 8cf6:B (1.34) BS04 MFU ? N/A A0A0S4TLR1 37137399
    785477 8cf6:C (1.34) BS01 MFU ? N/A A0A0S4TLR1 37137399
    785478 8cf6:C (1.34) BS02 MFU ? N/A A0A0S4TLR1 37137399
    785479 8cf6:C (1.34) BS03 MFU ? N/A A0A0S4TLR1 37137399
    785480 8cf7:A (1.14) BS01 QQ7 ? N/A A0A0S4TLR1 37137399
    785481 8cf7:B (1.14) BS01 QQ7 ? N/A A0A0S4TLR1 37137399
    785482 8cf7:C (1.14) BS01 QQ7 ? N/A A0A0S4TLR1 37137399
    785483 8cf7:D (1.14) BS01 QQ7 ? N/A A0A0S4TLR1 37137399
    785484 8cf7:E (1.14) BS01 QQ7 ? N/A A0A0S4TLR1 37137399
    785485 8cf7:F (1.14) BS01 QQ7 ? N/A A0A0S4TLR1 37137399
    785486 8cf8:B (2.2) BS01 rna ? GO:0000028 ... P0A7V0 37550453
    785487 8cf8:C (2.2) BS01 rna ? GO:0000028 ... P0A7V3 37550453
    785488 8cf8:G (2.2) BS01 rna ? GO:0000028 ... P02359 37550453
    785489 8cf8:I (2.2) BS01 rna ? GO:0002181 ... P0A7X3 37550453
    785490 8cf8:J (2.2) BS01 rna ? GO:0000049 ... P0A7R5 37550453
    785491 8cf8:M (2.2) BS01 rna ? GO:0000049 ... P0A7S9 37550453
    785492 8cf8:N (2.2) BS01 rna ? GO:0000028 ... P0AG59 37550453
    785493 8cf8:S (2.2) BS01 rna ? GO:0002181 ... P0A7U3 37550453
    785494 8cf9:A (2.0) BS01 UK6 ? GO:0003677 ... O75469 N/A
    785495 8cfb:A (2.07) BS01 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785496 8cfb:A (2.07) BS02 ADE 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785497 8cfb:A (2.07) BS03 SY4 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785498 8cfb:A (2.07) BS04 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785499 8cfb:B (2.07) BS01 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785500 8cfb:B (2.07) BS02 ADE 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785501 8cfb:B (2.07) BS03 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785502 8cfb:C (2.07) BS01 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785503 8cfb:C (2.07) BS02 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785504 8cfb:C (2.07) BS03 ADE 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785505 8cfb:D (2.07) BS01 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785506 8cfb:D (2.07) BS02 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785507 8cfb:D (2.07) BS03 ADE 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785508 8cfc:A (1.64) BS01 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785509 8cfc:A (1.64) BS02 ADE 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785510 8cfc:A (1.64) BS03 UHR 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785511 8cfc:A (1.64) BS04 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785512 8cfc:B (1.64) BS01 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785513 8cfc:B (1.64) BS02 ADE 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785514 8cfc:B (1.64) BS03 UHR 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785515 8cfc:B (1.64) BS04 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785516 8cfc:C (1.64) BS01 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785517 8cfc:C (1.64) BS02 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785518 8cfc:C (1.64) BS03 ADE 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785519 8cfc:D (1.64) BS01 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785520 8cfc:D (1.64) BS02 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785521 8cfc:D (1.64) BS03 ADE 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785522 8cfd:A (1.88) BS01 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785523 8cfd:A (1.88) BS02 ADE 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785524 8cfd:A (1.88) BS03 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785525 8cfd:B (1.88) BS01 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785526 8cfd:B (1.88) BS02 ADE 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785527 8cfd:B (1.88) BS03 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785528 8cfd:C (1.88) BS01 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785529 8cfd:C (1.88) BS02 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785530 8cfd:C (1.88) BS03 ADE 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785531 8cfd:D (1.88) BS01 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785532 8cfd:D (1.88) BS02 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785533 8cfd:D (1.88) BS03 ADE 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785534 8cfd:D (1.88) BS04 R8A 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785535 8cfe:A (1.8) BS01 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785536 8cfe:A (1.8) BS02 ADE 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785537 8cfe:A (1.8) BS03 T9G 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785538 8cfe:A (1.8) BS04 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785539 8cfe:B (1.8) BS01 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785540 8cfe:B (1.8) BS02 ADE 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785541 8cfe:B (1.8) BS03 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785542 8cfe:C (1.8) BS01 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785543 8cfe:C (1.8) BS02 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785544 8cfe:C (1.8) BS03 ADE 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785545 8cfe:C (1.8) BS04 T9G 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785546 8cfe:D (1.8) BS01 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785547 8cfe:D (1.8) BS02 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785548 8cfe:D (1.8) BS03 ADE 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785549 8cff:A (1.57) BS01 MGD 1.20.9.1 GO:0003954 ... Q7SIF4 37442232
    785550 8cff:A (1.57) BS02 MGD 1.20.9.1 GO:0003954 ... Q7SIF4 37442232
    785551 8cff:A (1.57) BS03 F3S 1.20.9.1 GO:0003954 ... Q7SIF4 37442232
    785552 8cff:A (1.57) BS04 AST 1.20.9.1 GO:0003954 ... Q7SIF4 37442232
    785553 8cff:B (1.57) BS01 FES 1.20.9.1 GO:0016020 ... Q7SIF3 37442232
    785554 8cff:C (1.57) BS01 MGD 1.20.9.1 GO:0003954 ... Q7SIF4 37442232
    785555 8cff:C (1.57) BS02 MGD 1.20.9.1 GO:0003954 ... Q7SIF4 37442232
    785556 8cff:C (1.57) BS03 F3S 1.20.9.1 GO:0003954 ... Q7SIF4 37442232
    785557 8cff:C (1.57) BS04 AST 1.20.9.1 GO:0003954 ... Q7SIF4 37442232
    785558 8cff:D (1.57) BS01 FES 1.20.9.1 GO:0016020 ... Q7SIF3 37442232
    785559 8cff:E (1.57) BS01 MGD 1.20.9.1 GO:0003954 ... Q7SIF4 37442232
    785560 8cff:E (1.57) BS02 MGD 1.20.9.1 GO:0003954 ... Q7SIF4 37442232
    785561 8cff:E (1.57) BS03 F3S 1.20.9.1 GO:0003954 ... Q7SIF4 37442232
    785562 8cff:E (1.57) BS04 AST 1.20.9.1 GO:0003954 ... Q7SIF4 37442232
    785563 8cff:F (1.57) BS01 FES 1.20.9.1 GO:0016020 ... Q7SIF3 37442232
    785564 8cff:G (1.57) BS01 MGD 1.20.9.1 GO:0003954 ... Q7SIF4 37442232
    785565 8cff:G (1.57) BS02 MGD 1.20.9.1 GO:0003954 ... Q7SIF4 37442232
    785566 8cff:G (1.57) BS03 F3S 1.20.9.1 GO:0003954 ... Q7SIF4 37442232
    785567 8cff:G (1.57) BS04 AST 1.20.9.1 GO:0003954 ... Q7SIF4 37442232
    785568 8cff:H (1.57) BS01 FES 1.20.9.1 GO:0016020 ... Q7SIF3 37442232
    785569 8cfg:A (1.73) BS01 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785570 8cfg:A (1.73) BS02 ADE 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785571 8cfg:A (1.73) BS03 R8S 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785572 8cfg:A (1.73) BS04 R8S 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785573 8cfg:A (1.73) BS05 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785574 8cfg:A (1.73) BS06 R8S 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785575 8cfg:B (1.73) BS01 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785576 8cfg:B (1.73) BS02 ADE 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785577 8cfg:B (1.73) BS03 R8S 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785578 8cfg:B (1.73) BS04 R8S 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785579 8cfg:B (1.73) BS05 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785580 8cfg:C (1.73) BS01 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785581 8cfg:C (1.73) BS02 R8S 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785582 8cfg:C (1.73) BS03 R8S 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785583 8cfg:C (1.73) BS04 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785584 8cfg:C (1.73) BS05 ADE 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785585 8cfg:D (1.73) BS01 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785586 8cfg:D (1.73) BS02 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785587 8cfg:D (1.73) BS03 ADE 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785588 8cfg:D (1.73) BS04 R8S 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785589 8cfh:A (1.6) BS01 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785590 8cfh:A (1.6) BS02 ADE 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785591 8cfh:A (1.6) BS03 R8V 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785592 8cfh:A (1.6) BS04 R8V 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785593 8cfh:A (1.6) BS05 R8V 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785594 8cfh:A (1.6) BS06 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785595 8cfh:A (1.6) BS07 R8V 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785596 8cfh:B (1.6) BS01 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785597 8cfh:B (1.6) BS02 ADE 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785598 8cfh:B (1.6) BS03 R8V 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785599 8cfh:B (1.6) BS04 R8V 3.13.2.1 GO:0004013 ... Q9I685 N/A
    785600 8cfh:B (1.6) BS05 NAD 3.13.2.1 GO:0004013 ... Q9I685 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).