SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 3921 3922 3923 3924 3925 3926 3927 3928 3929 3930 3931 3932 3933 3934 3935 3936 3937 3938 3939 3940 3941 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    786001 8cvk:13 (2.5) BS04 MG ? GO:0003735 ... Q5SHQ6 36316410
    786002 8cvk:14 (2.5) BS01 rna ? GO:0003735 ... Q5SJE1 36316410
    786003 8cvk:14 (2.5) BS02 ZN ? GO:0003735 ... Q5SJE1 36316410
    786004 8cvk:15 (2.5) BS01 rna ? GO:0003735 ... P80339 36316410
    786005 8cvk:15 (2.5) BS02 MG ? GO:0003735 ... P80339 36316410
    786006 8cvk:15 (2.5) BS03 MG ? GO:0003735 ... P80339 36316410
    786007 8cvk:15 (2.5) BS04 ZN ? GO:0003735 ... P80339 36316410
    786008 8cvk:16 (2.5) BS01 rna ? GO:0000049 ... P35871 36316410
    786009 8cvk:16 (2.5) BS02 MG ? GO:0000049 ... P35871 36316410
    786010 8cvk:16 (2.5) BS03 ZN ? GO:0000049 ... P35871 36316410
    786011 8cvk:17 (2.5) BS01 rna ? GO:0003735 ... P80340 36316410
    786012 8cvk:17 (2.5) BS02 MG ? GO:0003735 ... P80340 36316410
    786013 8cvk:18 (2.5) BS01 rna ? GO:0003735 ... Q5SKU1 36316410
    786014 8cvk:18 (2.5) BS02 MG ? GO:0003735 ... Q5SKU1 36316410
    786015 8cvk:18 (2.5) BS03 MG ? GO:0003735 ... Q5SKU1 36316410
    786016 8cvk:18 (2.5) BS04 MG ? GO:0003735 ... Q5SKU1 36316410
    786017 8cvk:18 (2.5) BS05 MG ? GO:0003735 ... Q5SKU1 36316410
    786018 8cvk:19 (2.5) BS01 rna ? GO:0003735 ... Q5SHR2 36316410
    786019 8cvk:19 (2.5) BS02 ZN ? GO:0003735 ... Q5SHR2 36316410
    786020 8cvk:1D (2.5) BS01 rna ? GO:0002181 ... P60405 36316410
    786021 8cvk:1D (2.5) BS02 rna ? GO:0002181 ... P60405 36316410
    786022 8cvk:1D (2.5) BS03 MG ? GO:0002181 ... P60405 36316410
    786023 8cvk:1D (2.5) BS04 MG ? GO:0002181 ... P60405 36316410
    786024 8cvk:1D (2.5) BS05 MG ? GO:0002181 ... P60405 36316410
    786025 8cvk:1D (2.5) BS06 MG ? GO:0002181 ... P60405 36316410
    786026 8cvk:1D (2.5) BS07 MG ? GO:0002181 ... P60405 36316410
    786027 8cvk:1D (2.5) BS08 MG ? GO:0002181 ... P60405 36316410
    786028 8cvk:1D (2.5) BS09 MG ? GO:0002181 ... P60405 36316410
    786029 8cvk:1D (2.5) BS10 MG ? GO:0002181 ... P60405 36316410
    786030 8cvk:1D (2.5) BS11 MG ? GO:0002181 ... P60405 36316410
    786031 8cvk:1D (2.5) BS12 MG ? GO:0002181 ... P60405 36316410
    786032 8cvk:1D (2.5) BS13 MG ? GO:0002181 ... P60405 36316410
    786033 8cvk:1E (2.5) BS01 rna ? GO:0003735 ... Q5SHN8 36316410
    786034 8cvk:1E (2.5) BS02 MG ? GO:0003735 ... Q5SHN8 36316410
    786035 8cvk:1E (2.5) BS03 MG ? GO:0003735 ... Q5SHN8 36316410
    786036 8cvk:1E (2.5) BS04 MG ? GO:0003735 ... Q5SHN8 36316410
    786037 8cvk:1E (2.5) BS05 MG ? GO:0003735 ... Q5SHN8 36316410
    786038 8cvk:1E (2.5) BS06 MG ? GO:0003735 ... Q5SHN8 36316410
    786039 8cvk:1F (2.5) BS01 rna ? GO:0003735 ... Q5SHN9 36316410
    786040 8cvk:1F (2.5) BS02 MG ? GO:0003735 ... Q5SHN9 36316410
    786041 8cvk:1F (2.5) BS03 MG ? GO:0003735 ... Q5SHN9 36316410
    786042 8cvk:1F (2.5) BS04 MG ? GO:0003735 ... Q5SHN9 36316410
    786043 8cvk:1F (2.5) BS05 MG ? GO:0003735 ... Q5SHN9 36316410
    786044 8cvk:1F (2.5) BS06 MG ? GO:0003735 ... Q5SHN9 36316410
    786045 8cvk:1F (2.5) BS07 MG ? GO:0003735 ... Q5SHN9 36316410
    786046 8cvk:1F (2.5) BS08 MG ? GO:0003735 ... Q5SHN9 36316410
    786047 8cvk:1F (2.5) BS09 MG ? GO:0003735 ... Q5SHN9 36316410
    786048 8cvk:1G (2.5) BS01 rna ? GO:0000049 ... Q5SHQ0 36316410
    786049 8cvk:1G (2.5) BS02 rna ? GO:0000049 ... Q5SHQ0 36316410
    786050 8cvk:1G (2.5) BS03 MG ? GO:0000049 ... Q5SHQ0 36316410
    786051 8cvk:1G (2.5) BS04 MG ? GO:0000049 ... Q5SHQ0 36316410
    786052 8cvk:1H (2.5) BS01 rna ? GO:0002181 ... P0DOY8 36316410
    786053 8cvk:1I (2.5) BS01 rna ? GO:0003735 ... Q5SLQ1 36316410
    786054 8cvk:1I (2.5) BS02 MG ? GO:0003735 ... Q5SLQ1 36316410
    786055 8cvk:1N (2.5) BS01 rna ? GO:0003729 ... P60488 36316410
    786056 8cvk:1N (2.5) BS02 MG ? GO:0003729 ... P60488 36316410
    786057 8cvk:1N (2.5) BS03 MG ? GO:0003729 ... P60488 36316410
    786058 8cvk:1N (2.5) BS04 MG ? GO:0003729 ... P60488 36316410
    786059 8cvk:1N (2.5) BS05 MG ? GO:0003729 ... P60488 36316410
    786060 8cvk:1O (2.5) BS01 rna ? GO:0003735 ... Q5SHP8 36316410
    786061 8cvk:1O (2.5) BS02 rna ? GO:0003735 ... Q5SHP8 36316410
    786062 8cvk:1O (2.5) BS03 MG ? GO:0003735 ... Q5SHP8 36316410
    786063 8cvk:1O (2.5) BS04 MG ? GO:0003735 ... Q5SHP8 36316410
    786064 8cvk:1P (2.5) BS01 rna ? GO:0003735 ... Q5SHQ7 36316410
    786065 8cvk:1P (2.5) BS02 MG ? GO:0003735 ... Q5SHQ7 36316410
    786066 8cvk:1P (2.5) BS03 MG ? GO:0003735 ... Q5SHQ7 36316410
    786067 8cvk:1P (2.5) BS04 MG ? GO:0003735 ... Q5SHQ7 36316410
    786068 8cvk:1P (2.5) BS05 MG ? GO:0003735 ... Q5SHQ7 36316410
    786069 8cvk:1Q (2.5) BS01 rna ? GO:0000049 ... P60489 36316410
    786070 8cvk:1Q (2.5) BS02 rna ? GO:0000049 ... P60489 36316410
    786071 8cvk:1Q (2.5) BS03 rna ? GO:0000049 ... P60489 36316410
    786072 8cvk:1Q (2.5) BS04 rna ? GO:0000049 ... P60489 36316410
    786073 8cvk:1Q (2.5) BS05 MG ? GO:0000049 ... P60489 36316410
    786074 8cvk:1Q (2.5) BS06 MG ? GO:0000049 ... P60489 36316410
    786075 8cvk:1Q (2.5) BS07 MG ? GO:0000049 ... P60489 36316410
    786076 8cvk:1Q (2.5) BS08 MG ? GO:0000049 ... P60489 36316410
    786077 8cvk:1R (2.5) BS01 rna ? GO:0003735 ... Q9Z9H5 36316410
    786078 8cvk:1R (2.5) BS02 MG ? GO:0003735 ... Q9Z9H5 36316410
    786079 8cvk:1R (2.5) BS03 MG ? GO:0003735 ... Q9Z9H5 36316410
    786080 8cvk:1S (2.5) BS01 rna ? GO:0003735 ... Q5SHQ4 36316410
    786081 8cvk:1S (2.5) BS02 rna ? GO:0003735 ... Q5SHQ4 36316410
    786082 8cvk:1S (2.5) BS03 MG ? GO:0003735 ... Q5SHQ4 36316410
    786083 8cvk:1S (2.5) BS04 MG ? GO:0003735 ... Q5SHQ4 36316410
    786084 8cvk:1T (2.5) BS01 rna ? GO:0003735 ... P60490 36316410
    786085 8cvk:1T (2.5) BS02 rna ? GO:0003735 ... P60490 36316410
    786086 8cvk:1U (2.5) BS01 rna ? GO:0000027 ... P60491 36316410
    786087 8cvk:1U (2.5) BS02 MG ? GO:0000027 ... P60491 36316410
    786088 8cvk:1U (2.5) BS03 MG ? GO:0000027 ... P60491 36316410
    786089 8cvk:1U (2.5) BS04 MG ? GO:0000027 ... P60491 36316410
    786090 8cvk:1U (2.5) BS05 MG ? GO:0000027 ... P60491 36316410
    786091 8cvk:1U (2.5) BS06 MG ? GO:0000027 ... P60491 36316410
    786092 8cvk:1U (2.5) BS07 MG ? GO:0000027 ... P60491 36316410
    786093 8cvk:1U (2.5) BS08 MG ? GO:0000027 ... P60491 36316410
    786094 8cvk:1V (2.5) BS01 rna ? GO:0003723 ... P60492 36316410
    786095 8cvk:1V (2.5) BS02 MG ? GO:0003723 ... P60492 36316410
    786096 8cvk:1V (2.5) BS03 MG ? GO:0003723 ... P60492 36316410
    786097 8cvk:1V (2.5) BS04 MG ? GO:0003723 ... P60492 36316410
    786098 8cvk:1V (2.5) BS05 MG ? GO:0003723 ... P60492 36316410
    786099 8cvk:1V (2.5) BS06 MG ? GO:0003723 ... P60492 36316410
    786100 8cvk:1W (2.5) BS01 rna ? GO:0003735 ... Q5SHP3 36316410
    786101 8cvk:1W (2.5) BS02 MG ? GO:0003735 ... Q5SHP3 36316410
    786102 8cvk:1W (2.5) BS03 MG ? GO:0003735 ... Q5SHP3 36316410
    786103 8cvk:1W (2.5) BS04 MG ? GO:0003735 ... Q5SHP3 36316410
    786104 8cvk:1X (2.5) BS01 rna ? GO:0003735 ... Q5SHP0 36316410
    786105 8cvk:1X (2.5) BS02 MG ? GO:0003735 ... Q5SHP0 36316410
    786106 8cvk:1X (2.5) BS03 MG ? GO:0003735 ... Q5SHP0 36316410
    786107 8cvk:1X (2.5) BS04 MG ? GO:0003735 ... Q5SHP0 36316410
    786108 8cvk:1X (2.5) BS05 MG ? GO:0003735 ... Q5SHP0 36316410
    786109 8cvk:1X (2.5) BS06 MG ? GO:0003735 ... Q5SHP0 36316410
    786110 8cvk:1Y (2.5) BS01 rna ? GO:0003723 ... Q5SHP9 36316410
    786111 8cvk:1Y (2.5) BS02 MG ? GO:0003723 ... Q5SHP9 36316410
    786112 8cvk:1Y (2.5) BS03 ZN ? GO:0003723 ... Q5SHP9 36316410
    786113 8cvk:1Z (2.5) BS01 rna ? GO:0003723 ... Q5SHZ1 36316410
    786114 8cvk:1Z (2.5) BS02 rna ? GO:0003723 ... Q5SHZ1 36316410
    786115 8cvk:1Z (2.5) BS03 MG ? GO:0003723 ... Q5SHZ1 36316410
    786116 8cvk:1b (2.5) BS01 rna ? GO:0003735 ... P80371 36316410
    786117 8cvk:1c (2.5) BS01 rna ? GO:0003676 ... P80372 36316410
    786118 8cvk:1d (2.5) BS01 rna ? GO:0003723 ... P80373 36316410
    786119 8cvk:1d (2.5) BS02 SF4 ? GO:0003723 ... P80373 36316410
    786120 8cvk:1e (2.5) BS01 rna ? GO:0003723 ... Q5SHQ5 36316410
    786121 8cvk:1e (2.5) BS02 MG ? GO:0003723 ... Q5SHQ5 36316410
    786122 8cvk:1e (2.5) BS03 MG ? GO:0003723 ... Q5SHQ5 36316410
    786123 8cvk:1f (2.5) BS01 rna ? GO:0003735 ... Q5SLP8 36316410
    786124 8cvk:1g (2.5) BS01 rna ? GO:0000049 ... P17291 36316410
    786125 8cvk:1g (2.5) BS02 rna ? GO:0000049 ... P17291 36316410
    786126 8cvk:1h (2.5) BS01 rna ? GO:0003735 ... P0DOY9 36316410
    786127 8cvk:1i (2.5) BS01 rna ? GO:0000049 ... P80374 36316410
    786128 8cvk:1j (2.5) BS01 rna ? GO:0000049 ... Q5SHN7 36316410
    786129 8cvk:1k (2.5) BS01 rna ? GO:0003735 ... P80376 36316410
    786130 8cvk:1k (2.5) BS02 MG ? GO:0003735 ... P80376 36316410
    786131 8cvk:1l (2.5) BS01 rna ? GO:0000049 ... Q5SHN3 36316410
    786132 8cvk:1l (2.5) BS02 rna ? GO:0000049 ... Q5SHN3 36316410
    786133 8cvk:1l (2.5) BS03 MG ? GO:0000049 ... Q5SHN3 36316410
    786134 8cvk:1m (2.5) BS01 rna ? GO:0000049 ... P80377 36316410
    786135 8cvk:1m (2.5) BS02 rna ? GO:0000049 ... P80377 36316410
    786136 8cvk:1m (2.5) BS03 rna ? GO:0000049 ... P80377 36316410
    786137 8cvk:1m (2.5) BS04 MG ? GO:0000049 ... P80377 36316410
    786138 8cvk:1n (2.5) BS01 rna ? GO:0003735 ... P0DOY6 36316410
    786139 8cvk:1n (2.5) BS02 ZN ? GO:0003735 ... P0DOY6 36316410
    786140 8cvk:1o (2.5) BS01 rna ? GO:0003735 ... Q5SJ76 36316410
    786141 8cvk:1o (2.5) BS02 rna ? GO:0003735 ... Q5SJ76 36316410
    786142 8cvk:1p (2.5) BS01 rna ? GO:0003735 ... Q5SJH3 36316410
    786143 8cvk:1q (2.5) BS01 rna ? GO:0003735 ... P0DOY7 36316410
    786144 8cvk:1r (2.5) BS01 rna ? GO:0003735 ... Q5SLQ0 36316410
    786145 8cvk:1s (2.5) BS01 rna ? GO:0000028 ... Q5SHP2 36316410
    786146 8cvk:1t (2.5) BS01 rna ? GO:0003723 ... P80380 36316410
    786147 8cvk:20 (2.5) BS01 rna ? GO:0003735 ... P60493 36316410
    786148 8cvk:20 (2.5) BS02 rna ? GO:0003735 ... P60493 36316410
    786149 8cvk:20 (2.5) BS03 rna ? GO:0003735 ... P60493 36316410
    786150 8cvk:21 (2.5) BS01 rna ? GO:0003735 ... P60494 36316410
    786151 8cvk:21 (2.5) BS02 rna ? GO:0003735 ... P60494 36316410
    786152 8cvk:22 (2.5) BS01 rna ? GO:0003735 ... Q5SHP6 36316410
    786153 8cvk:23 (2.5) BS01 rna ? GO:0003735 ... Q5SHQ6 36316410
    786154 8cvk:23 (2.5) BS02 rna ? GO:0003735 ... Q5SHQ6 36316410
    786155 8cvk:23 (2.5) BS03 MG ? GO:0003735 ... Q5SHQ6 36316410
    786156 8cvk:24 (2.5) BS01 rna ? GO:0003735 ... Q5SJE1 36316410
    786157 8cvk:24 (2.5) BS02 ZN ? GO:0003735 ... Q5SJE1 36316410
    786158 8cvk:25 (2.5) BS01 rna ? GO:0003735 ... P80339 36316410
    786159 8cvk:25 (2.5) BS02 MG ? GO:0003735 ... P80339 36316410
    786160 8cvk:25 (2.5) BS03 ZN ? GO:0003735 ... P80339 36316410
    786161 8cvk:26 (2.5) BS01 rna ? GO:0000049 ... P35871 36316410
    786162 8cvk:26 (2.5) BS02 MG ? GO:0000049 ... P35871 36316410
    786163 8cvk:26 (2.5) BS03 ZN ? GO:0000049 ... P35871 36316410
    786164 8cvk:27 (2.5) BS01 rna ? GO:0003735 ... P80340 36316410
    786165 8cvk:28 (2.5) BS01 rna ? GO:0003735 ... Q5SKU1 36316410
    786166 8cvk:28 (2.5) BS02 MG ? GO:0003735 ... Q5SKU1 36316410
    786167 8cvk:29 (2.5) BS01 rna ? GO:0003735 ... Q5SHR2 36316410
    786168 8cvk:29 (2.5) BS02 ZN ? GO:0003735 ... Q5SHR2 36316410
    786169 8cvk:2D (2.5) BS01 rna ? GO:0002181 ... P60405 36316410
    786170 8cvk:2D (2.5) BS02 rna ? GO:0002181 ... P60405 36316410
    786171 8cvk:2D (2.5) BS03 MG ? GO:0002181 ... P60405 36316410
    786172 8cvk:2D (2.5) BS04 MG ? GO:0002181 ... P60405 36316410
    786173 8cvk:2D (2.5) BS05 MG ? GO:0002181 ... P60405 36316410
    786174 8cvk:2D (2.5) BS06 MG ? GO:0002181 ... P60405 36316410
    786175 8cvk:2E (2.5) BS01 rna ? GO:0003735 ... Q5SHN8 36316410
    786176 8cvk:2E (2.5) BS02 MG ? GO:0003735 ... Q5SHN8 36316410
    786177 8cvk:2E (2.5) BS03 MG ? GO:0003735 ... Q5SHN8 36316410
    786178 8cvk:2F (2.5) BS01 rna ? GO:0003735 ... Q5SHN9 36316410
    786179 8cvk:2F (2.5) BS02 MG ? GO:0003735 ... Q5SHN9 36316410
    786180 8cvk:2F (2.5) BS03 MG ? GO:0003735 ... Q5SHN9 36316410
    786181 8cvk:2F (2.5) BS04 MG ? GO:0003735 ... Q5SHN9 36316410
    786182 8cvk:2G (2.5) BS01 rna ? GO:0000049 ... Q5SHQ0 36316410
    786183 8cvk:2G (2.5) BS02 rna ? GO:0000049 ... Q5SHQ0 36316410
    786184 8cvk:2G (2.5) BS03 rna ? GO:0000049 ... Q5SHQ0 36316410
    786185 8cvk:2G (2.5) BS04 MG ? GO:0000049 ... Q5SHQ0 36316410
    786186 8cvk:2H (2.5) BS01 rna ? GO:0002181 ... P0DOY8 36316410
    786187 8cvk:2I (2.5) BS01 rna ? GO:0003735 ... Q5SLQ1 36316410
    786188 8cvk:2N (2.5) BS01 rna ? GO:0003729 ... P60488 36316410
    786189 8cvk:2O (2.5) BS01 rna ? GO:0003735 ... Q5SHP8 36316410
    786190 8cvk:2O (2.5) BS02 rna ? GO:0003735 ... Q5SHP8 36316410
    786191 8cvk:2P (2.5) BS01 rna ? GO:0003735 ... Q5SHQ7 36316410
    786192 8cvk:2Q (2.5) BS01 rna ? GO:0000049 ... P60489 36316410
    786193 8cvk:2Q (2.5) BS02 rna ? GO:0000049 ... P60489 36316410
    786194 8cvk:2Q (2.5) BS03 rna ? GO:0000049 ... P60489 36316410
    786195 8cvk:2Q (2.5) BS04 rna ? GO:0000049 ... P60489 36316410
    786196 8cvk:2Q (2.5) BS05 MG ? GO:0000049 ... P60489 36316410
    786197 8cvk:2Q (2.5) BS06 MG ? GO:0000049 ... P60489 36316410
    786198 8cvk:2R (2.5) BS01 rna ? GO:0003735 ... Q9Z9H5 36316410
    786199 8cvk:2S (2.5) BS01 rna ? GO:0003735 ... Q5SHQ4 36316410
    786200 8cvk:2S (2.5) BS02 rna ? GO:0003735 ... Q5SHQ4 36316410

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).