SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    786201 8cgn:6 (2.28) BS01 rna ? GO:0002181 ... P0CX33 38030725
    786202 8cgn:7 (2.28) BS01 rna ? GO:0001965 ... P38011 38030725
    786203 8cgn:8 (2.28) BS01 rna ? GO:0003735 ... N/A 38030725
    786204 8cgn:A (2.28) BS01 rna ? GO:0000470 ... P26784 38030725
    786205 8cgn:B (2.28) BS01 rna N/A GO:0003735 ... N/A 38030725
    786206 8cgn:B (2.28) BS02 rna N/A GO:0003735 ... N/A 38030725
    786207 8cgn:C (2.28) BS01 rna ? GO:0002181 ... P0CX49 38030725
    786208 8cgn:D (2.28) BS01 rna ? GO:0002181 ... P0CX82 38030725
    786209 8cgn:D (2.28) BS02 rna ? GO:0002181 ... P0CX82 38030725
    786210 8cgn:DD (2.28) BS01 rna ? GO:0000027 ... P05317 38030725
    786211 8cgn:E (2.28) BS01 rna ? GO:0002181 ... P0CX23 38030725
    786212 8cgn:E (2.28) BS02 rna ? GO:0002181 ... P0CX23 38030725
    786213 8cgn:EE (2.28) BS01 rna ? GO:0002181 ... P0CX45 38030725
    786214 8cgn:EE (2.28) BS02 rna ? GO:0002181 ... P0CX45 38030725
    786215 8cgn:Ee (2.28) BS01 rna ? GO:0000027 ... P0CX53 38030725
    786216 8cgn:F (2.28) BS01 rna ? GO:0002181 ... Q02753 38030725
    786217 8cgn:F (2.28) BS02 rna ? GO:0002181 ... Q02753 38030725
    786218 8cgn:FF (2.28) BS01 rna ? GO:0000027 ... P14126 38030725
    786219 8cgn:G (2.28) BS01 rna ? GO:0002181 ... P05749 38030725
    786220 8cgn:GG (2.28) BS01 rna ? GO:0002181 ... P10664 38030725
    786221 8cgn:GG (2.28) BS02 rna ? GO:0002181 ... P10664 38030725
    786222 8cgn:H (2.28) BS01 rna ? GO:0002181 ... P0CX41 38030725
    786223 8cgn:H (2.28) BS02 rna ? GO:0002181 ... P0CX41 38030725
    786224 8cgn:HH (2.28) BS01 rna ? GO:0000027 ... P26321 38030725
    786225 8cgn:HH (2.28) BS02 rna ? GO:0000027 ... P26321 38030725
    786226 8cgn:I (2.28) BS01 rna ? GO:0002181 ... P04449 38030725
    786227 8cgn:II (2.28) BS01 rna ? GO:0000027 ... Q02326 38030725
    786228 8cgn:J (2.28) BS01 rna ? GO:0000027 ... P04456 38030725
    786229 8cgn:J (2.28) BS02 rna ? GO:0000027 ... P04456 38030725
    786230 8cgn:JJ (2.28) BS01 rna ? GO:0000463 ... P05737 38030725
    786231 8cgn:JJ (2.28) BS02 rna ? GO:0000463 ... P05737 38030725
    786232 8cgn:K (2.28) BS01 rna ? GO:0002181 ... P05743 38030725
    786233 8cgn:K (2.28) BS02 rna ? GO:0002181 ... P05743 38030725
    786234 8cgn:KK (2.28) BS01 rna ? GO:0000470 ... P17076 38030725
    786235 8cgn:KK (2.28) BS02 rna ? GO:0000470 ... P17076 38030725
    786236 8cgn:L (2.28) BS01 rna ? GO:0002181 ... P0C2H6 38030725
    786237 8cgn:LL (2.28) BS01 rna ? GO:0003735 ... N/A 38030725
    786238 8cgn:M (2.28) BS01 rna ? GO:0002181 ... P02406 38030725
    786239 8cgn:MM (2.28) BS01 rna ? GO:0000027 ... P41805 38030725
    786240 8cgn:MM (2.28) BS02 rna ? GO:0000027 ... P41805 38030725
    786241 8cgn:MM (2.28) BS03 rna ? GO:0000027 ... P41805 38030725
    786242 8cgn:N (2.28) BS01 rna ? GO:0002181 ... P05747 38030725
    786243 8cgn:NN (2.28) BS01 rna ? GO:0000027 ... P0C0W9 38030725
    786244 8cgn:NN (2.28) BS02 rna ? GO:0000027 ... P0C0W9 38030725
    786245 8cgn:O (2.28) BS01 rna ? GO:0002181 ... P14120 38030725
    786246 8cgn:OO (2.28) BS01 rna ? GO:0002181 ... Q12690 38030725
    786247 8cgn:OO (2.28) BS02 rna ? GO:0002181 ... Q12690 38030725
    786248 8cgn:P (2.28) BS01 rna ? GO:0002181 ... P0C2H8 38030725
    786249 8cgn:PP (2.28) BS01 rna ? GO:0000027 ... P36105 38030725
    786250 8cgn:Q (2.28) BS01 rna ? GO:0002181 ... P38061 38030725
    786251 8cgn:QQ (2.28) BS01 rna ? GO:0000470 ... P05748 38030725
    786252 8cgn:QQ (2.28) BS02 rna ? GO:0000470 ... P05748 38030725
    786253 8cgn:R (2.28) BS01 rna ? GO:0000027 ... P05744 38030725
    786254 8cgn:S (2.28) BS01 rna ? GO:0002181 ... P87262 38030725
    786255 8cgn:S (2.28) BS02 ZN ? GO:0002181 ... P87262 38030725
    786256 8cgn:T (2.28) BS01 rna ? GO:0000463 ... P0CX84 38030725
    786257 8cgn:T (2.28) BS02 rna ? GO:0000463 ... P0CX84 38030725
    786258 8cgn:U (2.28) BS01 rna ? GO:0000470 ... P05745 38030725
    786259 8cgn:V (2.28) BS01 rna ? GO:0000448 ... P49166 38030725
    786260 8cgn:V (2.28) BS02 rna ? GO:0000448 ... P49166 38030725
    786261 8cgn:V (2.28) BS03 ZN ? GO:0000448 ... P49166 38030725
    786262 8cgn:W (2.28) BS01 rna ? GO:0002181 ... P49167 38030725
    786263 8cgn:X (2.28) BS01 rna ? GO:0002181 ... P04650 38030725
    786264 8cgn:X (2.28) BS02 rna ? GO:0002181 ... P04650 38030725
    786265 8cgn:Y (2.28) BS01 rna ? GO:0000027 ... P0CH08 38030725
    786266 8cgn:Y (2.28) BS02 ZN ? GO:0000027 ... P0CH08 38030725
    786267 8cgn:a (2.28) BS01 rna ? GO:0002181 ... P0CX27 38030725
    786268 8cgn:a (2.28) BS02 rna ? GO:0002181 ... P0CX27 38030725
    786269 8cgn:a (2.28) BS03 ZN ? GO:0002181 ... P0CX27 38030725
    786270 8cgn:b (2.28) BS01 rna ? GO:0002181 ... P0CX25 38030725
    786271 8cgn:b (2.28) BS02 ZN ? GO:0002181 ... P0CX25 38030725
    786272 8cgn:d (2.28) BS01 rna ? GO:0000028 ... P32905 38030725
    786273 8cgn:e (2.28) BS01 rna ? GO:0000462 ... P33442 38030725
    786274 8cgn:e (2.28) BS02 rna ? GO:0000462 ... P33442 38030725
    786275 8cgn:f (2.28) BS01 rna ? GO:0000054 ... P25443 38030725
    786276 8cgn:g (2.28) BS01 rna ? GO:0003723 ... N/A 38030725
    786277 8cgn:h (2.28) BS01 rna ? GO:0002181 ... P0CX35 38030725
    786278 8cgn:i (2.28) BS01 rna ? GO:0000054 ... P26783 38030725
    786279 8cgn:i (2.28) BS02 rna ? GO:0000054 ... P26783 38030725
    786280 8cgn:j (2.28) BS01 rna ? GO:0000462 ... P0CX37 38030725
    786281 8cgn:k (2.28) BS01 rna ? GO:0002181 ... P26786 38030725
    786282 8cgn:l (2.28) BS01 rna ? GO:0000462 ... P0CX40 38030725
    786283 8cgn:l (2.28) BS02 rna ? GO:0000462 ... P0CX40 38030725
    786284 8cgn:m (2.28) BS01 rna ? GO:0000462 ... O13516 38030725
    786285 8cgn:n (2.28) BS01 rna ? GO:0000054 ... Q08745 38030725
    786286 8cgn:o (2.28) BS01 rna ? GO:0000028 ... P0CX47 38030725
    786287 8cgn:p (2.28) BS01 rna ? GO:0000462 ... P05756 38030725
    786288 8cgn:p (2.28) BS02 rna ? GO:0000462 ... P05756 38030725
    786289 8cgn:q (2.28) BS01 rna ? GO:0000028 ... P06367 38030725
    786290 8cgn:r (2.28) BS01 rna ? GO:0000054 ... Q01855 38030725
    786291 8cgn:s (2.28) BS01 rna ? GO:0000462 ... P0CX51 38030725
    786292 8cgn:t (2.28) BS01 rna ? GO:0000028 ... P02407 38030725
    786293 8cgn:u (2.28) BS01 rna ? GO:0000054 ... P0CX55 38030725
    786294 8cgn:v (2.28) BS01 rna ? GO:0000054 ... P07280 38030725
    786295 8cgn:w (2.28) BS01 rna ? GO:0003723 ... N/A 38030725
    786296 8cgn:y (2.28) BS01 rna ? GO:0002181 ... P0C0W1 38030725
    786297 8cgn:z (2.28) BS01 rna ? GO:0000462 ... P0CX29 38030725
    786298 8cgo:A (2.65) BS01 FUC 3.1.1.8 GO:0001540 ... P06276 36996715
    786299 8cgo:A (2.65) BS02 FUC 3.1.1.8 GO:0001540 ... P06276 36996715
    786300 8cgo:A (2.65) BS03 XB8 3.1.1.8 GO:0001540 ... P06276 36996715
    786301 8cgo:A (2.65) BS04 SIA 3.1.1.8 GO:0001540 ... P06276 36996715
    786302 8cgp:A (2.62) BS01 ZN 3.4.11.3 GO:0006508 ... Q9UIQ6 38244767
    786303 8cgp:A (2.62) BS02 UKG 3.4.11.3 GO:0006508 ... Q9UIQ6 38244767
    786304 8cgp:B (2.62) BS01 ZN 3.4.11.3 GO:0006508 ... Q9UIQ6 38244767
    786305 8cgp:B (2.62) BS02 UKG 3.4.11.3 GO:0006508 ... Q9UIQ6 38244767
    786306 8cgq:A (2.04) BS01 UDP 2.4.1.- GO:0008194 ... A0A096SRM5 N/A
    786307 8cgr:D (2.12) BS01 rna ? GO:0000028 ... P0A7V8 37550453
    786308 8cgr:E (2.12) BS01 rna ? GO:0000028 ... P0A7W1 37550453
    786309 8cgr:F (2.12) BS01 rna ? GO:0002181 ... P02358 37550453
    786310 8cgr:H (2.12) BS01 rna ? GO:0000028 ... P0A7W7 37550453
    786311 8cgr:K (2.12) BS01 rna ? GO:0002181 ... P0A7R9 37550453
    786312 8cgr:L (2.12) BS01 rna ? GO:0000049 ... P0A7S3 37550453
    786313 8cgr:O (2.12) BS01 rna ? GO:0000028 ... P0ADZ4 37550453
    786314 8cgr:P (2.12) BS01 rna ? GO:0000028 ... P0A7T3 37550453
    786315 8cgr:Q (2.12) BS01 rna ? GO:0000028 ... P0AG63 37550453
    786316 8cgr:R (2.12) BS01 rna ? GO:0002181 ... P0A7T7 37550453
    786317 8cgr:T (2.12) BS01 rna ? GO:0000028 ... P0A7U7 37550453
    786318 8cgr:U (2.12) BS01 rna ? GO:0000028 ... P68679 37550453
    786319 8cgs:A (1.84) BS01 MGD 1.20.9.1 GO:0003954 ... Q7SIF4 37442232
    786320 8cgs:A (1.84) BS02 MGD 1.20.9.1 GO:0003954 ... Q7SIF4 37442232
    786321 8cgs:A (1.84) BS03 F3S 1.20.9.1 GO:0003954 ... Q7SIF4 37442232
    786322 8cgs:A (1.84) BS04 UJI 1.20.9.1 GO:0003954 ... Q7SIF4 37442232
    786323 8cgs:B (1.84) BS01 FES 1.20.9.1 GO:0016020 ... Q7SIF3 37442232
    786324 8cgs:C (1.84) BS01 MGD 1.20.9.1 GO:0003954 ... Q7SIF4 37442232
    786325 8cgs:C (1.84) BS02 MGD 1.20.9.1 GO:0003954 ... Q7SIF4 37442232
    786326 8cgs:C (1.84) BS03 F3S 1.20.9.1 GO:0003954 ... Q7SIF4 37442232
    786327 8cgs:C (1.84) BS04 UJI 1.20.9.1 GO:0003954 ... Q7SIF4 37442232
    786328 8cgs:D (1.84) BS01 FES 1.20.9.1 GO:0016020 ... Q7SIF3 37442232
    786329 8cgs:E (1.84) BS01 MGD 1.20.9.1 GO:0003954 ... Q7SIF4 37442232
    786330 8cgs:E (1.84) BS02 MGD 1.20.9.1 GO:0003954 ... Q7SIF4 37442232
    786331 8cgs:E (1.84) BS03 F3S 1.20.9.1 GO:0003954 ... Q7SIF4 37442232
    786332 8cgs:E (1.84) BS04 UJI 1.20.9.1 GO:0003954 ... Q7SIF4 37442232
    786333 8cgs:F (1.84) BS01 FES 1.20.9.1 GO:0016020 ... Q7SIF3 37442232
    786334 8cgs:G (1.84) BS01 MGD 1.20.9.1 GO:0003954 ... Q7SIF4 37442232
    786335 8cgs:G (1.84) BS02 MGD 1.20.9.1 GO:0003954 ... Q7SIF4 37442232
    786336 8cgs:G (1.84) BS03 F3S 1.20.9.1 GO:0003954 ... Q7SIF4 37442232
    786337 8cgs:G (1.84) BS04 UJI 1.20.9.1 GO:0003954 ... Q7SIF4 37442232
    786338 8cgs:H (1.84) BS01 FES 1.20.9.1 GO:0016020 ... Q7SIF3 37442232
    786339 8cgt:A (2.4) BS01 GLC 2.4.1.19 GO:0003824 ... P30920 9738912
    786340 8cgt:A (2.4) BS02 4SG 2.4.1.19 GO:0003824 ... P30920 9738912
    786341 8cgt:A (2.4) BS03 GLC 2.4.1.19 GO:0003824 ... P30920 9738912
    786342 8cgt:A (2.4) BS04 4SG 2.4.1.19 GO:0003824 ... P30920 9738912
    786343 8cgt:A (2.4) BS05 CA 2.4.1.19 GO:0003824 ... P30920 9738912
    786344 8cgt:A (2.4) BS06 CA 2.4.1.19 GO:0003824 ... P30920 9738912
    786345 8cgu:D (1.89) BS01 rna ? GO:0000028 ... P0A7V8 37550453
    786346 8cgu:E (1.89) BS01 rna ? GO:0000028 ... P0A7W1 37550453
    786347 8cgu:F (1.89) BS01 rna ? GO:0002181 ... P02358 37550453
    786348 8cgu:H (1.89) BS01 rna ? GO:0000028 ... P0A7W7 37550453
    786349 8cgu:K (1.89) BS01 rna ? GO:0002181 ... P0A7R9 37550453
    786350 8cgu:L (1.89) BS01 rna ? GO:0000049 ... P0A7S3 37550453
    786351 8cgu:O (1.89) BS01 rna ? GO:0000028 ... P0ADZ4 37550453
    786352 8cgu:P (1.89) BS01 rna ? GO:0000028 ... P0A7T3 37550453
    786353 8cgu:Q (1.89) BS01 rna ? GO:0000028 ... P0AG63 37550453
    786354 8cgu:R (1.89) BS01 rna ? GO:0002181 ... P0A7T7 37550453
    786355 8cgu:T (1.89) BS01 rna ? GO:0000028 ... P0A7U7 37550453
    786356 8cgu:U (1.89) BS01 rna ? GO:0000028 ... P68679 37550453
    786357 8cgv:0 (1.66) BS01 rna ? GO:0000027 ... P0A7N9 37550453
    786358 8cgv:1 (1.66) BS01 rna ? GO:0002181 ... P0A7P5 37550453
    786359 8cgv:2 (1.66) BS01 rna ? GO:0002181 ... P0A7Q1 37550453
    786360 8cgv:3 (1.66) BS01 rna ? GO:0002181 ... P0A7Q6 37550453
    786361 8cgv:3 (1.66) BS02 ZN ? GO:0002181 ... P0A7Q6 37550453
    786362 8cgv:c (1.66) BS01 rna ? GO:0000027 ... P60422 37550453
    786363 8cgv:d (1.66) BS01 rna ? GO:0000027 ... P60438 37550453
    786364 8cgv:e (1.66) BS01 rna ? GO:0001070 ... P60723 37550453
    786365 8cgv:g (1.66) BS01 rna ? GO:0000027 ... P0AG55 37550453
    786366 8cgv:i (1.66) BS01 rna ? GO:0002181 ... P0AA10 37550453
    786367 8cgv:j (1.66) BS01 rna ? GO:0002181 ... P0ADY3 37550453
    786368 8cgv:k (1.66) BS01 rna ? GO:0002181 ... P02413 37550453
    786369 8cgv:l (1.66) BS01 rna ? GO:0000027 ... P0ADY7 37550453
    786370 8cgv:l (1.66) BS02 rna ? GO:0000027 ... P0ADY7 37550453
    786371 8cgv:m (1.66) BS01 rna ? GO:0000027 ... P0AG44 37550453
    786372 8cgv:o (1.66) BS01 rna ? GO:0000027 ... P0A7K6 37550453
    786373 8cgv:p (1.66) BS01 rna ? GO:0000027 ... P0A7L3 37550453
    786374 8cgv:q (1.66) BS01 rna ? GO:0002181 ... P0AG48 37550453
    786375 8cgv:r (1.66) BS01 rna ? GO:0002181 ... P61175 37550453
    786376 8cgv:s (1.66) BS01 rna ? GO:0000027 ... P0ADZ0 37550453
    786377 8cgv:t (1.66) BS01 rna ? GO:0000027 ... P60624 37550453
    786378 8cgv:u (1.66) BS01 rna ? GO:0000027 ... P68919 37550453
    786379 8cgv:v (1.66) BS01 rna ? GO:0000027 ... P0A7L8 37550453
    786380 8cgv:v (1.66) BS02 rna ? GO:0000027 ... P0A7L8 37550453
    786381 8cgv:v (1.66) BS03 MG ? GO:0000027 ... P0A7L8 37550453
    786382 8cgv:w (1.66) BS01 rna ? GO:0000027 ... P0A7M2 37550453
    786383 8cgv:w (1.66) BS02 peptide ? GO:0000027 ... P0A7M2 37550453
    786384 8cgv:x (1.66) BS01 rna ? GO:0000027 ... P0A7M6 37550453
    786385 8cgv:y (1.66) BS01 rna ? GO:0000027 ... P0AG51 37550453
    786386 8cgv:y (1.66) BS02 rna ? GO:0000027 ... P0AG51 37550453
    786387 8cgv:z (1.66) BS01 rna ? GO:0000027 ... P0A7N4 37550453
    786388 8cgw:A (3.03) BS01 ZN 3.4.11.3 GO:0006508 ... Q9UIQ6 38244767
    786389 8cgw:A (3.03) BS02 UJX 3.4.11.3 GO:0006508 ... Q9UIQ6 38244767
    786390 8cgw:B (3.03) BS01 ZN 3.4.11.3 GO:0006508 ... Q9UIQ6 38244767
    786391 8cgy:A (3.0) BS01 ATP 1.1.1.205 GO:0000166 ... P50098 38402242
    786392 8cgy:A (3.0) BS02 GDP 1.1.1.205 GO:0000166 ... P50098 38402242
    786393 8cgy:B (3.0) BS01 ATP 1.1.1.205 GO:0000166 ... P50098 38402242
    786394 8cgy:B (3.0) BS02 GDP 1.1.1.205 GO:0000166 ... P50098 38402242
    786395 8cgz:A (2.527) BS01 GTP N/A GO:0005200 ... A0A836D7T3 N/A
    786396 8cgz:B (2.527) BS01 GDP N/A GO:0003924 ... D0VWY9 N/A
    786397 8cgz:B (2.527) BS02 UIY N/A GO:0003924 ... D0VWY9 N/A
    786398 8cgz:C (2.527) BS01 GTP N/A GO:0005200 ... A0A836D7T3 N/A
    786399 8cgz:D (2.527) BS01 GDP N/A GO:0003924 ... D0VWY9 N/A
    786400 8cgz:D (2.527) BS02 UIY N/A GO:0003924 ... D0VWY9 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).