SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    786201 8cvk:2T (2.5) BS01 rna ? GO:0003735 ... P60490 36316410
    786202 8cvk:2T (2.5) BS02 rna ? GO:0003735 ... P60490 36316410
    786203 8cvk:2T (2.5) BS03 MG ? GO:0003735 ... P60490 36316410
    786204 8cvk:2U (2.5) BS01 rna ? GO:0000027 ... P60491 36316410
    786205 8cvk:2U (2.5) BS02 MG ? GO:0000027 ... P60491 36316410
    786206 8cvk:2V (2.5) BS01 rna ? GO:0003723 ... P60492 36316410
    786207 8cvk:2V (2.5) BS02 MG ? GO:0003723 ... P60492 36316410
    786208 8cvk:2W (2.5) BS01 rna ? GO:0003735 ... Q5SHP3 36316410
    786209 8cvk:2W (2.5) BS02 MG ? GO:0003735 ... Q5SHP3 36316410
    786210 8cvk:2W (2.5) BS03 MG ? GO:0003735 ... Q5SHP3 36316410
    786211 8cvk:2X (2.5) BS01 rna ? GO:0003735 ... Q5SHP0 36316410
    786212 8cvk:2X (2.5) BS02 MG ? GO:0003735 ... Q5SHP0 36316410
    786213 8cvk:2Y (2.5) BS01 rna ? GO:0003723 ... Q5SHP9 36316410
    786214 8cvk:2Y (2.5) BS02 ZN ? GO:0003723 ... Q5SHP9 36316410
    786215 8cvk:2Z (2.5) BS01 rna ? GO:0003723 ... Q5SHZ1 36316410
    786216 8cvk:2Z (2.5) BS02 rna ? GO:0003723 ... Q5SHZ1 36316410
    786217 8cvk:2Z (2.5) BS03 MG ? GO:0003723 ... Q5SHZ1 36316410
    786218 8cvk:2b (2.5) BS01 rna ? GO:0003735 ... P80371 36316410
    786219 8cvk:2c (2.5) BS01 rna ? GO:0003676 ... P80372 36316410
    786220 8cvk:2d (2.5) BS01 rna ? GO:0003723 ... P80373 36316410
    786221 8cvk:2d (2.5) BS02 MG ? GO:0003723 ... P80373 36316410
    786222 8cvk:2d (2.5) BS03 SF4 ? GO:0003723 ... P80373 36316410
    786223 8cvk:2e (2.5) BS01 rna ? GO:0003723 ... Q5SHQ5 36316410
    786224 8cvk:2e (2.5) BS02 MG ? GO:0003723 ... Q5SHQ5 36316410
    786225 8cvk:2f (2.5) BS01 rna ? GO:0003735 ... Q5SLP8 36316410
    786226 8cvk:2g (2.5) BS01 rna ? GO:0000049 ... P17291 36316410
    786227 8cvk:2g (2.5) BS02 rna ? GO:0000049 ... P17291 36316410
    786228 8cvk:2g (2.5) BS03 MG ? GO:0000049 ... P17291 36316410
    786229 8cvk:2h (2.5) BS01 rna ? GO:0003735 ... P0DOY9 36316410
    786230 8cvk:2i (2.5) BS01 rna ? GO:0000049 ... P80374 36316410
    786231 8cvk:2i (2.5) BS02 rna ? GO:0000049 ... P80374 36316410
    786232 8cvk:2j (2.5) BS01 rna ? GO:0000049 ... Q5SHN7 36316410
    786233 8cvk:2k (2.5) BS01 rna ? GO:0003735 ... P80376 36316410
    786234 8cvk:2k (2.5) BS02 MG ? GO:0003735 ... P80376 36316410
    786235 8cvk:2l (2.5) BS01 rna ? GO:0000049 ... Q5SHN3 36316410
    786236 8cvk:2l (2.5) BS02 rna ? GO:0000049 ... Q5SHN3 36316410
    786237 8cvk:2l (2.5) BS03 MG ? GO:0000049 ... Q5SHN3 36316410
    786238 8cvk:2l (2.5) BS04 MG ? GO:0000049 ... Q5SHN3 36316410
    786239 8cvk:2l (2.5) BS05 MG ? GO:0000049 ... Q5SHN3 36316410
    786240 8cvk:2m (2.5) BS01 rna ? GO:0000049 ... P80377 36316410
    786241 8cvk:2m (2.5) BS02 rna ? GO:0000049 ... P80377 36316410
    786242 8cvk:2n (2.5) BS01 rna ? GO:0003735 ... P0DOY6 36316410
    786243 8cvk:2n (2.5) BS02 ZN ? GO:0003735 ... P0DOY6 36316410
    786244 8cvk:2o (2.5) BS01 rna ? GO:0003735 ... Q5SJ76 36316410
    786245 8cvk:2o (2.5) BS02 rna ? GO:0003735 ... Q5SJ76 36316410
    786246 8cvk:2p (2.5) BS01 rna ? GO:0003735 ... Q5SJH3 36316410
    786247 8cvk:2q (2.5) BS01 rna ? GO:0003735 ... P0DOY7 36316410
    786248 8cvk:2q (2.5) BS02 MG ? GO:0003735 ... P0DOY7 36316410
    786249 8cvk:2q (2.5) BS03 MG ? GO:0003735 ... P0DOY7 36316410
    786250 8cvk:2r (2.5) BS01 rna ? GO:0003735 ... Q5SLQ0 36316410
    786251 8cvk:2s (2.5) BS01 rna ? GO:0000028 ... Q5SHP2 36316410
    786252 8cvk:2t (2.5) BS01 rna ? GO:0003723 ... P80380 36316410
    786253 8cvl:10 (2.3) BS01 rna ? GO:0003735 ... P60493 36316410
    786254 8cvl:10 (2.3) BS02 rna ? GO:0003735 ... P60493 36316410
    786255 8cvl:10 (2.3) BS03 rna ? GO:0003735 ... P60493 36316410
    786256 8cvl:10 (2.3) BS04 MG ? GO:0003735 ... P60493 36316410
    786257 8cvl:10 (2.3) BS05 MG ? GO:0003735 ... P60493 36316410
    786258 8cvl:10 (2.3) BS06 MG ? GO:0003735 ... P60493 36316410
    786259 8cvl:11 (2.3) BS01 rna ? GO:0003735 ... P60494 36316410
    786260 8cvl:11 (2.3) BS02 rna ? GO:0003735 ... P60494 36316410
    786261 8cvl:11 (2.3) BS03 MG ? GO:0003735 ... P60494 36316410
    786262 8cvl:11 (2.3) BS04 MG ? GO:0003735 ... P60494 36316410
    786263 8cvl:12 (2.3) BS01 rna ? GO:0003735 ... Q5SHP6 36316410
    786264 8cvl:12 (2.3) BS02 MG ? GO:0003735 ... Q5SHP6 36316410
    786265 8cvl:13 (2.3) BS01 rna ? GO:0003735 ... Q5SHQ6 36316410
    786266 8cvl:13 (2.3) BS02 rna ? GO:0003735 ... Q5SHQ6 36316410
    786267 8cvl:13 (2.3) BS03 MG ? GO:0003735 ... Q5SHQ6 36316410
    786268 8cvl:13 (2.3) BS04 MG ? GO:0003735 ... Q5SHQ6 36316410
    786269 8cvl:14 (2.3) BS01 rna ? GO:0003735 ... Q5SJE1 36316410
    786270 8cvl:14 (2.3) BS02 rna ? GO:0003735 ... Q5SJE1 36316410
    786271 8cvl:14 (2.3) BS03 MG ? GO:0003735 ... Q5SJE1 36316410
    786272 8cvl:14 (2.3) BS04 ZN ? GO:0003735 ... Q5SJE1 36316410
    786273 8cvl:15 (2.3) BS01 rna ? GO:0003735 ... P80339 36316410
    786274 8cvl:15 (2.3) BS02 MG ? GO:0003735 ... P80339 36316410
    786275 8cvl:15 (2.3) BS03 ZN ? GO:0003735 ... P80339 36316410
    786276 8cvl:16 (2.3) BS01 rna ? GO:0000049 ... P35871 36316410
    786277 8cvl:16 (2.3) BS02 MG ? GO:0000049 ... P35871 36316410
    786278 8cvl:16 (2.3) BS03 ZN ? GO:0000049 ... P35871 36316410
    786279 8cvl:17 (2.3) BS01 rna ? GO:0003735 ... P80340 36316410
    786280 8cvl:17 (2.3) BS02 MG ? GO:0003735 ... P80340 36316410
    786281 8cvl:17 (2.3) BS03 MG ? GO:0003735 ... P80340 36316410
    786282 8cvl:18 (2.3) BS01 rna ? GO:0003735 ... Q5SKU1 36316410
    786283 8cvl:18 (2.3) BS02 MG ? GO:0003735 ... Q5SKU1 36316410
    786284 8cvl:18 (2.3) BS03 MG ? GO:0003735 ... Q5SKU1 36316410
    786285 8cvl:18 (2.3) BS04 MG ? GO:0003735 ... Q5SKU1 36316410
    786286 8cvl:19 (2.3) BS01 rna ? GO:0003735 ... Q5SHR2 36316410
    786287 8cvl:19 (2.3) BS02 ZN ? GO:0003735 ... Q5SHR2 36316410
    786288 8cvl:1D (2.3) BS01 rna ? GO:0002181 ... P60405 36316410
    786289 8cvl:1D (2.3) BS02 rna ? GO:0002181 ... P60405 36316410
    786290 8cvl:1D (2.3) BS03 MG ? GO:0002181 ... P60405 36316410
    786291 8cvl:1D (2.3) BS04 MG ? GO:0002181 ... P60405 36316410
    786292 8cvl:1D (2.3) BS05 MG ? GO:0002181 ... P60405 36316410
    786293 8cvl:1D (2.3) BS06 MG ? GO:0002181 ... P60405 36316410
    786294 8cvl:1D (2.3) BS07 MG ? GO:0002181 ... P60405 36316410
    786295 8cvl:1D (2.3) BS08 MG ? GO:0002181 ... P60405 36316410
    786296 8cvl:1D (2.3) BS09 MG ? GO:0002181 ... P60405 36316410
    786297 8cvl:1D (2.3) BS10 MG ? GO:0002181 ... P60405 36316410
    786298 8cvl:1D (2.3) BS11 MG ? GO:0002181 ... P60405 36316410
    786299 8cvl:1D (2.3) BS12 MG ? GO:0002181 ... P60405 36316410
    786300 8cvl:1E (2.3) BS01 rna ? GO:0003735 ... Q5SHN8 36316410
    786301 8cvl:1E (2.3) BS02 MG ? GO:0003735 ... Q5SHN8 36316410
    786302 8cvl:1E (2.3) BS03 MG ? GO:0003735 ... Q5SHN8 36316410
    786303 8cvl:1E (2.3) BS04 MG ? GO:0003735 ... Q5SHN8 36316410
    786304 8cvl:1E (2.3) BS05 MG ? GO:0003735 ... Q5SHN8 36316410
    786305 8cvl:1F (2.3) BS01 rna ? GO:0003735 ... Q5SHN9 36316410
    786306 8cvl:1F (2.3) BS02 MG ? GO:0003735 ... Q5SHN9 36316410
    786307 8cvl:1F (2.3) BS03 MG ? GO:0003735 ... Q5SHN9 36316410
    786308 8cvl:1F (2.3) BS04 MG ? GO:0003735 ... Q5SHN9 36316410
    786309 8cvl:1F (2.3) BS05 MG ? GO:0003735 ... Q5SHN9 36316410
    786310 8cvl:1F (2.3) BS06 MG ? GO:0003735 ... Q5SHN9 36316410
    786311 8cvl:1F (2.3) BS07 MG ? GO:0003735 ... Q5SHN9 36316410
    786312 8cvl:1F (2.3) BS08 MG ? GO:0003735 ... Q5SHN9 36316410
    786313 8cvl:1F (2.3) BS09 MG ? GO:0003735 ... Q5SHN9 36316410
    786314 8cvl:1G (2.3) BS01 rna ? GO:0000049 ... Q5SHQ0 36316410
    786315 8cvl:1G (2.3) BS02 rna ? GO:0000049 ... Q5SHQ0 36316410
    786316 8cvl:1G (2.3) BS03 rna ? GO:0000049 ... Q5SHQ0 36316410
    786317 8cvl:1G (2.3) BS04 MG ? GO:0000049 ... Q5SHQ0 36316410
    786318 8cvl:1G (2.3) BS05 MG ? GO:0000049 ... Q5SHQ0 36316410
    786319 8cvl:1H (2.3) BS01 rna ? GO:0002181 ... P0DOY8 36316410
    786320 8cvl:1I (2.3) BS01 rna ? GO:0003735 ... Q5SLQ1 36316410
    786321 8cvl:1N (2.3) BS01 rna ? GO:0003729 ... P60488 36316410
    786322 8cvl:1N (2.3) BS02 MG ? GO:0003729 ... P60488 36316410
    786323 8cvl:1N (2.3) BS03 MG ? GO:0003729 ... P60488 36316410
    786324 8cvl:1N (2.3) BS04 MG ? GO:0003729 ... P60488 36316410
    786325 8cvl:1N (2.3) BS05 MG ? GO:0003729 ... P60488 36316410
    786326 8cvl:1O (2.3) BS01 rna ? GO:0003735 ... Q5SHP8 36316410
    786327 8cvl:1O (2.3) BS02 rna ? GO:0003735 ... Q5SHP8 36316410
    786328 8cvl:1O (2.3) BS03 MG ? GO:0003735 ... Q5SHP8 36316410
    786329 8cvl:1O (2.3) BS04 MG ? GO:0003735 ... Q5SHP8 36316410
    786330 8cvl:1O (2.3) BS05 MG ? GO:0003735 ... Q5SHP8 36316410
    786331 8cvl:1P (2.3) BS01 rna ? GO:0003735 ... Q5SHQ7 36316410
    786332 8cvl:1P (2.3) BS02 MG ? GO:0003735 ... Q5SHQ7 36316410
    786333 8cvl:1P (2.3) BS03 MG ? GO:0003735 ... Q5SHQ7 36316410
    786334 8cvl:1P (2.3) BS04 MG ? GO:0003735 ... Q5SHQ7 36316410
    786335 8cvl:1P (2.3) BS05 MG ? GO:0003735 ... Q5SHQ7 36316410
    786336 8cvl:1Q (2.3) BS01 rna ? GO:0000049 ... P60489 36316410
    786337 8cvl:1Q (2.3) BS02 rna ? GO:0000049 ... P60489 36316410
    786338 8cvl:1Q (2.3) BS03 rna ? GO:0000049 ... P60489 36316410
    786339 8cvl:1Q (2.3) BS04 rna ? GO:0000049 ... P60489 36316410
    786340 8cvl:1Q (2.3) BS05 MG ? GO:0000049 ... P60489 36316410
    786341 8cvl:1Q (2.3) BS06 MG ? GO:0000049 ... P60489 36316410
    786342 8cvl:1Q (2.3) BS07 MG ? GO:0000049 ... P60489 36316410
    786343 8cvl:1Q (2.3) BS08 MG ? GO:0000049 ... P60489 36316410
    786344 8cvl:1Q (2.3) BS09 MG ? GO:0000049 ... P60489 36316410
    786345 8cvl:1R (2.3) BS01 rna ? GO:0003735 ... Q9Z9H5 36316410
    786346 8cvl:1R (2.3) BS02 MG ? GO:0003735 ... Q9Z9H5 36316410
    786347 8cvl:1R (2.3) BS03 MG ? GO:0003735 ... Q9Z9H5 36316410
    786348 8cvl:1R (2.3) BS04 MG ? GO:0003735 ... Q9Z9H5 36316410
    786349 8cvl:1S (2.3) BS01 rna ? GO:0003735 ... Q5SHQ4 36316410
    786350 8cvl:1S (2.3) BS02 rna ? GO:0003735 ... Q5SHQ4 36316410
    786351 8cvl:1S (2.3) BS03 MG ? GO:0003735 ... Q5SHQ4 36316410
    786352 8cvl:1S (2.3) BS04 MG ? GO:0003735 ... Q5SHQ4 36316410
    786353 8cvl:1T (2.3) BS01 rna ? GO:0003735 ... P60490 36316410
    786354 8cvl:1T (2.3) BS02 rna ? GO:0003735 ... P60490 36316410
    786355 8cvl:1U (2.3) BS01 rna ? GO:0000027 ... P60491 36316410
    786356 8cvl:1U (2.3) BS02 MG ? GO:0000027 ... P60491 36316410
    786357 8cvl:1U (2.3) BS03 MG ? GO:0000027 ... P60491 36316410
    786358 8cvl:1U (2.3) BS04 MG ? GO:0000027 ... P60491 36316410
    786359 8cvl:1U (2.3) BS05 MG ? GO:0000027 ... P60491 36316410
    786360 8cvl:1U (2.3) BS06 MG ? GO:0000027 ... P60491 36316410
    786361 8cvl:1U (2.3) BS07 MG ? GO:0000027 ... P60491 36316410
    786362 8cvl:1V (2.3) BS01 rna ? GO:0003723 ... P60492 36316410
    786363 8cvl:1V (2.3) BS02 MG ? GO:0003723 ... P60492 36316410
    786364 8cvl:1V (2.3) BS03 MG ? GO:0003723 ... P60492 36316410
    786365 8cvl:1V (2.3) BS04 MG ? GO:0003723 ... P60492 36316410
    786366 8cvl:1V (2.3) BS05 MG ? GO:0003723 ... P60492 36316410
    786367 8cvl:1V (2.3) BS06 MG ? GO:0003723 ... P60492 36316410
    786368 8cvl:1W (2.3) BS01 rna ? GO:0003735 ... Q5SHP3 36316410
    786369 8cvl:1W (2.3) BS02 MG ? GO:0003735 ... Q5SHP3 36316410
    786370 8cvl:1W (2.3) BS03 MG ? GO:0003735 ... Q5SHP3 36316410
    786371 8cvl:1W (2.3) BS04 MG ? GO:0003735 ... Q5SHP3 36316410
    786372 8cvl:1W (2.3) BS05 MG ? GO:0003735 ... Q5SHP3 36316410
    786373 8cvl:1X (2.3) BS01 rna ? GO:0003735 ... Q5SHP0 36316410
    786374 8cvl:1X (2.3) BS02 MG ? GO:0003735 ... Q5SHP0 36316410
    786375 8cvl:1X (2.3) BS03 MG ? GO:0003735 ... Q5SHP0 36316410
    786376 8cvl:1X (2.3) BS04 MG ? GO:0003735 ... Q5SHP0 36316410
    786377 8cvl:1X (2.3) BS05 MG ? GO:0003735 ... Q5SHP0 36316410
    786378 8cvl:1X (2.3) BS06 MG ? GO:0003735 ... Q5SHP0 36316410
    786379 8cvl:1Y (2.3) BS01 rna ? GO:0003723 ... Q5SHP9 36316410
    786380 8cvl:1Y (2.3) BS02 MG ? GO:0003723 ... Q5SHP9 36316410
    786381 8cvl:1Y (2.3) BS03 ZN ? GO:0003723 ... Q5SHP9 36316410
    786382 8cvl:1Z (2.3) BS01 rna ? GO:0003723 ... Q5SHZ1 36316410
    786383 8cvl:1Z (2.3) BS02 rna ? GO:0003723 ... Q5SHZ1 36316410
    786384 8cvl:1Z (2.3) BS03 MG ? GO:0003723 ... Q5SHZ1 36316410
    786385 8cvl:1b (2.3) BS01 rna ? GO:0003735 ... P80371 36316410
    786386 8cvl:1c (2.3) BS01 rna ? GO:0003676 ... P80372 36316410
    786387 8cvl:1d (2.3) BS01 rna ? GO:0003723 ... P80373 36316410
    786388 8cvl:1d (2.3) BS02 SF4 ? GO:0003723 ... P80373 36316410
    786389 8cvl:1e (2.3) BS01 rna ? GO:0003723 ... Q5SHQ5 36316410
    786390 8cvl:1e (2.3) BS02 MG ? GO:0003723 ... Q5SHQ5 36316410
    786391 8cvl:1e (2.3) BS03 MG ? GO:0003723 ... Q5SHQ5 36316410
    786392 8cvl:1f (2.3) BS01 rna ? GO:0003735 ... Q5SLP8 36316410
    786393 8cvl:1f (2.3) BS02 MG ? GO:0003735 ... Q5SLP8 36316410
    786394 8cvl:1g (2.3) BS01 rna ? GO:0000049 ... P17291 36316410
    786395 8cvl:1g (2.3) BS02 rna ? GO:0000049 ... P17291 36316410
    786396 8cvl:1h (2.3) BS01 rna ? GO:0003735 ... P0DOY9 36316410
    786397 8cvl:1i (2.3) BS01 rna ? GO:0000049 ... P80374 36316410
    786398 8cvl:1i (2.3) BS02 rna ? GO:0000049 ... P80374 36316410
    786399 8cvl:1j (2.3) BS01 rna ? GO:0000049 ... Q5SHN7 36316410
    786400 8cvl:1k (2.3) BS01 rna ? GO:0003735 ... P80376 36316410

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).